Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81506.t1 | XP_013463978.1 | 98.3 | 350 | 5 | 1 | 12 | 361 | 15 | 363 | 1.30E-195 | 692.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81506.t1 | P93324 | 62.2 | 357 | 129 | 4 | 9 | 361 | 18 | 372 | 3.9e-124 | 446.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81506.t1 | A0A072V9H2 | 98.3 | 350 | 5 | 1 | 12 | 361 | 15 | 363 | 9.3e-196 | 692.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04926 | MS.gene81506 | 0.802856 | 4.60E-49 | -1.69E-46 |
MS.gene04932 | MS.gene81506 | 0.82962 | 4.65E-55 | -1.69E-46 |
MS.gene049549 | MS.gene81506 | 0.875336 | 3.34E-68 | -1.69E-46 |
MS.gene049813 | MS.gene81506 | 0.848622 | 5.45E-60 | -1.69E-46 |
MS.gene050095 | MS.gene81506 | 0.81795 | 2.53E-52 | -1.69E-46 |
MS.gene051044 | MS.gene81506 | 0.805268 | 1.45E-49 | -1.69E-46 |
MS.gene05104 | MS.gene81506 | 0.806663 | 7.37E-50 | -1.69E-46 |
MS.gene051127 | MS.gene81506 | 0.808977 | 2.38E-50 | -1.69E-46 |
MS.gene051131 | MS.gene81506 | 0.83535 | 1.77E-56 | -1.69E-46 |
MS.gene051440 | MS.gene81506 | 0.811835 | 5.74E-51 | -1.69E-46 |
MS.gene052211 | MS.gene81506 | 0.86334 | 2.67E-64 | -1.69E-46 |
MS.gene052212 | MS.gene81506 | 0.823246 | 1.54E-53 | -1.69E-46 |
MS.gene052403 | MS.gene81506 | 0.808725 | 2.69E-50 | -1.69E-46 |
MS.gene05240 | MS.gene81506 | 0.875023 | 4.27E-68 | -1.69E-46 |
MS.gene052606 | MS.gene81506 | 0.826393 | 2.78E-54 | -1.69E-46 |
MS.gene052702 | MS.gene81506 | 0.830891 | 2.27E-55 | -1.69E-46 |
MS.gene052705 | MS.gene81506 | 0.816365 | 5.74E-52 | -1.69E-46 |
MS.gene052706 | MS.gene81506 | 0.80006 | 1.72E-48 | -1.69E-46 |
MS.gene053031 | MS.gene81506 | 0.803919 | 2.77E-49 | -1.69E-46 |
MS.gene053033 | MS.gene81506 | 0.806864 | 6.69E-50 | -1.69E-46 |
MS.gene053406 | MS.gene81506 | 0.81578 | 7.76E-52 | -1.69E-46 |
MS.gene053420 | MS.gene81506 | 0.801437 | 9.01E-49 | -1.69E-46 |
MS.gene053488 | MS.gene81506 | 0.804844 | 1.78E-49 | -1.69E-46 |
MS.gene053887 | MS.gene81506 | 0.861265 | 1.16E-63 | -1.69E-46 |
MS.gene054146 | MS.gene81506 | 0.87929 | 1.41E-69 | -1.69E-46 |
MS.gene054147 | MS.gene81506 | 0.822877 | 1.87E-53 | -1.69E-46 |
MS.gene054181 | MS.gene81506 | 0.810721 | 1.00E-50 | -1.69E-46 |
MS.gene054277 | MS.gene81506 | 0.872878 | 2.27E-67 | -1.69E-46 |
MS.gene054742 | MS.gene81506 | 0.85698 | 2.23E-62 | -1.69E-46 |
MS.gene05483 | MS.gene81506 | 0.840042 | 1.10E-57 | -1.69E-46 |
MS.gene054884 | MS.gene81506 | 0.804356 | 2.25E-49 | -1.69E-46 |
MS.gene055124 | MS.gene81506 | 0.800952 | 1.13E-48 | -1.69E-46 |
MS.gene055240 | MS.gene81506 | 0.834377 | 3.11E-56 | -1.69E-46 |
MS.gene055977 | MS.gene81506 | 0.816566 | 5.18E-52 | -1.69E-46 |
MS.gene056218 | MS.gene81506 | 0.824097 | 9.71E-54 | -1.69E-46 |
MS.gene056224 | MS.gene81506 | 0.81603 | 6.82E-52 | -1.69E-46 |
MS.gene056358 | MS.gene81506 | 0.808389 | 3.17E-50 | -1.69E-46 |
MS.gene056359 | MS.gene81506 | 0.819136 | 1.36E-52 | -1.69E-46 |
MS.gene056590 | MS.gene81506 | 0.830944 | 2.21E-55 | -1.69E-46 |
MS.gene056591 | MS.gene81506 | 0.830217 | 3.33E-55 | -1.69E-46 |
MS.gene056697 | MS.gene81506 | 0.80929 | 2.04E-50 | -1.69E-46 |
MS.gene056713 | MS.gene81506 | 0.816052 | 6.75E-52 | -1.69E-46 |
MS.gene056715 | MS.gene81506 | 0.829137 | 6.09E-55 | -1.69E-46 |
MS.gene056748 | MS.gene81506 | 0.827335 | 1.66E-54 | -1.69E-46 |
MS.gene056856 | MS.gene81506 | 0.817095 | 3.94E-52 | -1.69E-46 |
MS.gene056920 | MS.gene81506 | 0.84633 | 2.32E-59 | -1.69E-46 |
MS.gene056922 | MS.gene81506 | 0.824016 | 1.01E-53 | -1.69E-46 |
MS.gene056988 | MS.gene81506 | 0.81306 | 3.10E-51 | -1.69E-46 |
MS.gene057261 | MS.gene81506 | 0.848023 | 7.98E-60 | -1.69E-46 |
MS.gene057544 | MS.gene81506 | 0.826809 | 2.21E-54 | -1.69E-46 |
MS.gene057547 | MS.gene81506 | 0.819327 | 1.23E-52 | -1.69E-46 |
MS.gene057548 | MS.gene81506 | 0.802464 | 5.54E-49 | -1.69E-46 |
MS.gene057550 | MS.gene81506 | 0.83569 | 1.45E-56 | -1.69E-46 |
MS.gene057768 | MS.gene81506 | 0.802082 | 6.64E-49 | -1.69E-46 |
MS.gene057820 | MS.gene81506 | 0.803282 | 3.76E-49 | -1.69E-46 |
MS.gene058068 | MS.gene81506 | 0.806486 | 8.04E-50 | -1.69E-46 |
MS.gene058099 | MS.gene81506 | 0.811811 | 5.81E-51 | -1.69E-46 |
MS.gene05837 | MS.gene81506 | -0.801923 | 7.16E-49 | -1.69E-46 |
MS.gene058381 | MS.gene81506 | 0.850513 | 1.62E-60 | -1.69E-46 |
MS.gene058450 | MS.gene81506 | 0.83818 | 3.35E-57 | -1.69E-46 |
MS.gene058603 | MS.gene81506 | 0.837075 | 6.44E-57 | -1.69E-46 |
MS.gene059060 | MS.gene81506 | 0.848395 | 6.30E-60 | -1.69E-46 |
MS.gene059953 | MS.gene81506 | 0.862188 | 6.05E-64 | -1.69E-46 |
MS.gene059955 | MS.gene81506 | 0.86146 | 1.01E-63 | -1.69E-46 |
MS.gene060087 | MS.gene81506 | 0.863502 | 2.38E-64 | -1.69E-46 |
MS.gene060118 | MS.gene81506 | 0.80251 | 5.42E-49 | -1.69E-46 |
MS.gene060358 | MS.gene81506 | 0.821885 | 3.18E-53 | -1.69E-46 |
MS.gene060593 | MS.gene81506 | 0.838852 | 2.25E-57 | -1.69E-46 |
MS.gene060790 | MS.gene81506 | 0.843262 | 1.56E-58 | -1.69E-46 |
MS.gene061038 | MS.gene81506 | 0.805157 | 1.53E-49 | -1.69E-46 |
MS.gene061092 | MS.gene81506 | 0.819391 | 1.19E-52 | -1.69E-46 |
MS.gene061094 | MS.gene81506 | 0.820359 | 7.15E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81506.t1 | MTR_2g055940 | 98.286 | 350 | 5 | 1 | 12 | 361 | 15 | 363 | 0.0 | 708 |
MS.gene81506.t1 | MTR_7g011900 | 75.354 | 353 | 85 | 2 | 10 | 361 | 19 | 370 | 0.0 | 558 |
MS.gene81506.t1 | MTR_7g011990 | 68.272 | 353 | 107 | 3 | 10 | 361 | 19 | 367 | 0.0 | 507 |
MS.gene81506.t1 | MTR_7g012020 | 68.839 | 353 | 108 | 2 | 10 | 361 | 18 | 369 | 0.0 | 506 |
MS.gene81506.t1 | MTR_7g012040 | 68.839 | 353 | 107 | 3 | 10 | 361 | 18 | 368 | 9.66e-179 | 500 |
MS.gene81506.t1 | MTR_7g012090 | 63.408 | 358 | 124 | 3 | 10 | 361 | 19 | 375 | 3.51e-166 | 469 |
MS.gene81506.t1 | MTR_7g012070 | 62.810 | 363 | 126 | 4 | 5 | 361 | 16 | 375 | 1.33e-165 | 468 |
MS.gene81506.t1 | MTR_1g096310 | 62.465 | 357 | 128 | 4 | 9 | 361 | 18 | 372 | 1.22e-162 | 460 |
MS.gene81506.t1 | MTR_7g012020 | 71.765 | 255 | 70 | 2 | 10 | 263 | 18 | 271 | 2.80e-129 | 372 |
MS.gene81506.t1 | MTR_1g036460 | 51.567 | 351 | 161 | 6 | 17 | 361 | 23 | 370 | 4.38e-127 | 369 |
MS.gene81506.t1 | MTR_1g036490 | 51.852 | 351 | 160 | 7 | 17 | 361 | 23 | 370 | 1.06e-126 | 369 |
MS.gene81506.t1 | MTR_1g036510 | 51.282 | 351 | 162 | 6 | 17 | 361 | 37 | 384 | 5.07e-120 | 352 |
MS.gene81506.t1 | MTR_3g021440 | 50.000 | 364 | 176 | 6 | 1 | 361 | 10 | 370 | 5.10e-118 | 346 |
MS.gene81506.t1 | MTR_7g012020 | 72.034 | 236 | 64 | 2 | 10 | 244 | 18 | 252 | 6.53e-118 | 342 |
MS.gene81506.t1 | MTR_3g021430 | 51.335 | 337 | 160 | 4 | 26 | 361 | 24 | 357 | 4.63e-117 | 343 |
MS.gene81506.t1 | MTR_3g092900 | 43.333 | 360 | 198 | 6 | 4 | 361 | 8 | 363 | 1.43e-103 | 309 |
MS.gene81506.t1 | MTR_5g098170 | 41.899 | 358 | 198 | 9 | 9 | 361 | 11 | 363 | 4.96e-90 | 275 |
MS.gene81506.t1 | MTR_0591s0010 | 40.173 | 346 | 201 | 6 | 19 | 361 | 35 | 377 | 5.33e-86 | 265 |
MS.gene81506.t1 | MTR_1g050220 | 44.144 | 333 | 130 | 7 | 17 | 344 | 6 | 287 | 1.54e-85 | 261 |
MS.gene81506.t1 | MTR_7g118320 | 39.306 | 346 | 204 | 6 | 19 | 361 | 20 | 362 | 5.82e-82 | 254 |
MS.gene81506.t1 | MTR_7g118300 | 39.326 | 356 | 206 | 8 | 9 | 361 | 27 | 375 | 1.15e-81 | 254 |
MS.gene81506.t1 | MTR_8g068690 | 37.815 | 357 | 215 | 7 | 9 | 361 | 23 | 376 | 6.20e-80 | 249 |
MS.gene81506.t1 | MTR_1g036510 | 51.984 | 252 | 113 | 5 | 17 | 263 | 37 | 285 | 1.37e-79 | 246 |
MS.gene81506.t1 | MTR_6g060290 | 72.941 | 170 | 30 | 2 | 6 | 175 | 17 | 170 | 1.71e-79 | 241 |
MS.gene81506.t1 | MTR_8g068750 | 37.861 | 346 | 209 | 6 | 19 | 361 | 35 | 377 | 1.59e-78 | 246 |
MS.gene81506.t1 | MTR_8g068870 | 36.207 | 348 | 216 | 6 | 17 | 361 | 19 | 363 | 3.59e-74 | 234 |
MS.gene81506.t1 | MTR_8g068570 | 38.339 | 313 | 161 | 7 | 19 | 328 | 35 | 318 | 9.24e-68 | 216 |
MS.gene81506.t1 | MTR_8g024160 | 36.565 | 361 | 178 | 8 | 5 | 361 | 15 | 328 | 1.30e-67 | 216 |
MS.gene81506.t1 | MTR_1g036510 | 49.784 | 231 | 108 | 5 | 17 | 242 | 37 | 264 | 2.38e-67 | 213 |
MS.gene81506.t1 | MTR_6g078850 | 36.286 | 350 | 214 | 7 | 17 | 359 | 37 | 384 | 1.13e-65 | 216 |
MS.gene81506.t1 | MTR_8g068730 | 35.838 | 346 | 184 | 7 | 19 | 361 | 35 | 345 | 1.66e-62 | 203 |
MS.gene81506.t1 | MTR_2g072790 | 32.653 | 343 | 216 | 7 | 10 | 346 | 7 | 340 | 1.02e-56 | 189 |
MS.gene81506.t1 | MTR_3g096050 | 34.637 | 358 | 215 | 10 | 12 | 361 | 12 | 358 | 1.10e-55 | 186 |
MS.gene81506.t1 | MTR_8g068690 | 37.190 | 242 | 148 | 4 | 26 | 265 | 41 | 280 | 6.45e-52 | 174 |
MS.gene81506.t1 | MTR_3g096070 | 33.138 | 341 | 191 | 10 | 12 | 346 | 12 | 321 | 4.82e-51 | 173 |
MS.gene81506.t1 | MTR_0017s0100 | 34.421 | 337 | 200 | 13 | 32 | 360 | 44 | 367 | 2.84e-49 | 169 |
MS.gene81506.t1 | MTR_0079s0070 | 34.783 | 322 | 188 | 10 | 32 | 344 | 10 | 318 | 9.37e-49 | 167 |
MS.gene81506.t1 | MTR_4g038440 | 34.675 | 323 | 189 | 10 | 31 | 344 | 43 | 352 | 1.88e-48 | 167 |
MS.gene81506.t1 | MTR_8g068600 | 36.681 | 229 | 141 | 4 | 37 | 263 | 27 | 253 | 7.57e-45 | 155 |
MS.gene81506.t1 | MTR_8g068740 | 35.632 | 261 | 132 | 5 | 19 | 277 | 35 | 261 | 5.58e-44 | 153 |
MS.gene81506.t1 | MTR_3g083620 | 32.278 | 316 | 199 | 8 | 30 | 341 | 38 | 342 | 2.31e-43 | 154 |
MS.gene81506.t1 | MTR_5g074600 | 31.387 | 274 | 173 | 7 | 96 | 360 | 91 | 358 | 4.79e-43 | 153 |
MS.gene81506.t1 | MTR_5g074680 | 29.532 | 342 | 212 | 10 | 32 | 360 | 34 | 359 | 1.62e-42 | 152 |
MS.gene81506.t1 | MTR_4g088340 | 28.994 | 338 | 222 | 8 | 29 | 360 | 7 | 332 | 3.29e-39 | 142 |
MS.gene81506.t1 | MTR_4g088345 | 28.402 | 338 | 224 | 7 | 29 | 360 | 30 | 355 | 5.51e-39 | 142 |
MS.gene81506.t1 | MTR_5g074540 | 34.101 | 217 | 132 | 4 | 137 | 345 | 113 | 326 | 7.94e-38 | 139 |
MS.gene81506.t1 | MTR_3g096050 | 35.294 | 255 | 155 | 6 | 12 | 263 | 12 | 259 | 1.23e-37 | 136 |
MS.gene81506.t1 | MTR_5g074580 | 27.566 | 341 | 220 | 11 | 32 | 360 | 34 | 359 | 1.62e-37 | 138 |
MS.gene81506.t1 | MTR_1g076940 | 28.349 | 321 | 218 | 6 | 31 | 345 | 32 | 346 | 8.57e-37 | 136 |
MS.gene81506.t1 | MTR_4g033015 | 29.851 | 335 | 221 | 8 | 31 | 356 | 32 | 361 | 1.37e-35 | 133 |
MS.gene81506.t1 | MTR_4g088200 | 29.721 | 323 | 211 | 9 | 31 | 345 | 32 | 346 | 8.10e-35 | 131 |
MS.gene81506.t1 | MTR_4g033200 | 29.552 | 335 | 222 | 8 | 31 | 356 | 32 | 361 | 9.81e-35 | 131 |
MS.gene81506.t1 | MTR_7g014570 | 31.915 | 235 | 149 | 5 | 132 | 360 | 122 | 351 | 1.83e-34 | 130 |
MS.gene81506.t1 | MTR_4g079160 | 34.694 | 196 | 120 | 4 | 156 | 345 | 147 | 340 | 2.78e-34 | 129 |
MS.gene81506.t1 | MTR_4g033150 | 29.254 | 335 | 223 | 8 | 31 | 356 | 32 | 361 | 4.87e-34 | 129 |
MS.gene81506.t1 | MTR_7g024520 | 33.824 | 204 | 129 | 4 | 160 | 359 | 147 | 348 | 5.20e-34 | 129 |
MS.gene81506.t1 | MTR_8g068620 | 47.273 | 110 | 58 | 0 | 155 | 264 | 2 | 111 | 1.12e-33 | 121 |
MS.gene81506.t1 | MTR_7g014510 | 26.471 | 306 | 209 | 6 | 60 | 360 | 62 | 356 | 1.48e-33 | 127 |
MS.gene81506.t1 | MTR_7g024500 | 34.031 | 191 | 121 | 3 | 159 | 345 | 146 | 335 | 2.26e-33 | 127 |
MS.gene81506.t1 | MTR_4g088190 | 30.031 | 323 | 213 | 8 | 31 | 345 | 32 | 349 | 4.38e-30 | 118 |
MS.gene81506.t1 | MTR_5g074610 | 29.098 | 244 | 139 | 5 | 123 | 360 | 110 | 325 | 4.55e-30 | 117 |
MS.gene81506.t1 | MTR_4g038440 | 34.310 | 239 | 138 | 7 | 32 | 263 | 44 | 270 | 2.23e-29 | 114 |
MS.gene81506.t1 | MTR_4g033170 | 29.924 | 264 | 160 | 8 | 31 | 285 | 32 | 279 | 8.26e-26 | 106 |
MS.gene81506.t1 | MTR_4g033085 | 29.658 | 263 | 160 | 8 | 31 | 284 | 32 | 278 | 2.11e-24 | 102 |
MS.gene81506.t1 | MTR_6g060280 | 69.355 | 62 | 13 | 2 | 216 | 272 | 2 | 62 | 3.38e-20 | 84.0 |
MS.gene81506.t1 | MTR_1g076930 | 24.790 | 238 | 169 | 5 | 29 | 263 | 7 | 237 | 3.46e-20 | 89.0 |
MS.gene81506.t1 | MTR_8g068760 | 38.000 | 100 | 60 | 2 | 263 | 361 | 135 | 233 | 5.76e-16 | 76.6 |
MS.gene81506.t1 | MTR_0794s0020 | 25.792 | 221 | 157 | 5 | 31 | 248 | 32 | 248 | 6.66e-15 | 73.9 |
MS.gene81506.t1 | MTR_8g068580 | 42.391 | 92 | 51 | 2 | 271 | 361 | 43 | 133 | 1.37e-14 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81506.t1 | AT5G54160 | 44.290 | 359 | 194 | 6 | 4 | 361 | 8 | 361 | 1.88e-103 | 309 |
MS.gene81506.t1 | AT1G77520 | 38.136 | 354 | 209 | 7 | 16 | 361 | 30 | 381 | 2.58e-82 | 256 |
MS.gene81506.t1 | AT1G51990 | 39.879 | 331 | 193 | 5 | 15 | 341 | 15 | 343 | 2.79e-82 | 255 |
MS.gene81506.t1 | AT1G51990 | 39.577 | 331 | 194 | 5 | 15 | 341 | 15 | 343 | 4.69e-82 | 254 |
MS.gene81506.t1 | AT1G77530 | 40.678 | 354 | 200 | 7 | 16 | 361 | 30 | 381 | 2.58e-78 | 245 |
MS.gene81506.t1 | AT1G33030 | 39.535 | 344 | 195 | 8 | 19 | 355 | 10 | 347 | 9.53e-78 | 243 |
MS.gene81506.t1 | AT1G63140 | 37.228 | 368 | 219 | 9 | 4 | 361 | 16 | 381 | 7.87e-76 | 239 |
MS.gene81506.t1 | AT1G63140 | 37.228 | 368 | 219 | 9 | 4 | 361 | 36 | 401 | 1.68e-75 | 239 |
MS.gene81506.t1 | AT5G53810 | 38.012 | 342 | 201 | 8 | 29 | 361 | 39 | 378 | 1.29e-69 | 223 |
MS.gene81506.t1 | AT1G21100 | 39.244 | 344 | 194 | 9 | 17 | 351 | 27 | 364 | 2.65e-69 | 222 |
MS.gene81506.t1 | AT1G21130 | 38.953 | 344 | 195 | 9 | 17 | 351 | 27 | 364 | 4.71e-68 | 219 |
MS.gene81506.t1 | AT1G21110 | 38.663 | 344 | 196 | 9 | 17 | 351 | 27 | 364 | 2.46e-66 | 214 |
MS.gene81506.t1 | AT1G21120 | 38.372 | 344 | 197 | 9 | 17 | 351 | 27 | 364 | 2.77e-65 | 211 |
MS.gene81506.t1 | AT1G21120 | 38.372 | 344 | 197 | 9 | 17 | 351 | 75 | 412 | 7.49e-65 | 212 |
MS.gene81506.t1 | AT1G76790 | 37.709 | 358 | 201 | 9 | 17 | 361 | 17 | 365 | 2.19e-64 | 209 |
MS.gene81506.t1 | AT3G53140 | 34.503 | 342 | 200 | 8 | 17 | 345 | 14 | 344 | 1.11e-58 | 194 |
MS.gene81506.t1 | AT1G62900 | 42.233 | 206 | 116 | 3 | 158 | 361 | 1 | 205 | 2.75e-57 | 185 |
MS.gene81506.t1 | AT5G37170 | 41.414 | 198 | 112 | 4 | 167 | 361 | 38 | 234 | 2.66e-51 | 171 |
MS.gene81506.t1 | AT5G37170 | 32.831 | 332 | 182 | 9 | 38 | 361 | 36 | 334 | 3.90e-51 | 174 |
MS.gene81506.t1 | AT1G33030 | 39.600 | 250 | 145 | 5 | 19 | 266 | 10 | 255 | 7.63e-51 | 171 |
MS.gene81506.t1 | AT1G33030 | 39.676 | 247 | 143 | 5 | 19 | 263 | 10 | 252 | 3.31e-50 | 169 |
MS.gene81506.t1 | AT5G37170 | 41.176 | 187 | 106 | 4 | 178 | 361 | 1 | 186 | 4.57e-48 | 161 |
MS.gene81506.t1 | AT1G63140 | 35.448 | 268 | 164 | 6 | 4 | 263 | 36 | 302 | 1.27e-43 | 153 |
MS.gene81506.t1 | AT1G77530 | 38.298 | 235 | 138 | 4 | 16 | 244 | 30 | 263 | 2.54e-39 | 141 |
MS.gene81506.t1 | AT1G21130 | 37.795 | 254 | 145 | 7 | 17 | 263 | 27 | 274 | 1.33e-38 | 139 |
MS.gene81506.t1 | AT4G35150 | 31.687 | 243 | 148 | 7 | 120 | 345 | 68 | 309 | 4.13e-38 | 139 |
MS.gene81506.t1 | AT4G35160 | 33.840 | 263 | 150 | 8 | 102 | 345 | 109 | 366 | 4.25e-36 | 135 |
MS.gene81506.t1 | AT1G63140 | 34.137 | 249 | 155 | 6 | 4 | 244 | 36 | 283 | 3.95e-33 | 125 |
Find 79 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTTTATTGATGGGTATT+TGG | 0.140968 | 2.1:+36274926 | None:intergenic |
GGTACTACTTTGAGAGTTTA+TGG | 0.145146 | 2.1:-36275398 | MS.gene81506:CDS |
GACGCATCTCGATTCATTTA+TGG | 0.185909 | 2.1:-36274412 | MS.gene81506:CDS |
TGAAAATGATGGTGGTTATT+TGG | 0.190360 | 2.1:-36275342 | MS.gene81506:CDS |
GACCTATTCAAGAAAGTTAA+TGG | 0.210657 | 2.1:-36275131 | MS.gene81506:CDS |
TTTGAAAGAATATGAAAGTT+TGG | 0.223106 | 2.1:-36274344 | MS.gene81506:CDS |
TGCCAAATACCCATCAATAA+AGG | 0.282531 | 2.1:-36274928 | MS.gene81506:CDS |
AAGACACGATCGAGTCTATT+TGG | 0.300123 | 2.1:+36275479 | None:intergenic |
CGAGATGCGTCTGTTGGTTC+TGG | 0.300236 | 2.1:+36274424 | None:intergenic |
GTTTATGGGGTCACTTCTTC+TGG | 0.301463 | 2.1:-36275383 | MS.gene81506:CDS |
GAAAATGATGGTGGTTATTT+GGG | 0.319757 | 2.1:-36275341 | MS.gene81506:CDS |
TTCCATTAACTTTCTTGAAT+AGG | 0.343440 | 2.1:+36275129 | None:intergenic |
TTGAAAGAATATGAAAGTTT+GGG | 0.349066 | 2.1:-36274343 | MS.gene81506:CDS |
CACACTGACCTTAAGTAGTA+TGG | 0.352819 | 2.1:+36274689 | None:intergenic |
AAAGCCTTGTGACAAGTAAA+TGG | 0.354130 | 2.1:+36275308 | None:intergenic |
ACTTGTCACAAGGCTTTGTT+TGG | 0.367785 | 2.1:-36275302 | MS.gene81506:CDS |
TTTAGAGTGTATGCCATAAC+TGG | 0.370585 | 2.1:-36274543 | MS.gene81506:intron |
CATTTAGGGATCCAACATAT+TGG | 0.374317 | 2.1:-36274747 | MS.gene81506:intron |
ACACTCTCTGCTATGGTGTT+AGG | 0.375320 | 2.1:-36275638 | MS.gene81506:CDS |
GTACTACTTTGAGAGTTTAT+GGG | 0.376400 | 2.1:-36275397 | MS.gene81506:CDS |
GGTAAGTCGGAGTGTTGATT+TGG | 0.380815 | 2.1:+36275500 | None:intergenic |
AAATTGATTCCCTTTATTGA+TGG | 0.391826 | 2.1:+36274918 | None:intergenic |
GCCAAATACCCATCAATAAA+GGG | 0.393194 | 2.1:-36274927 | MS.gene81506:CDS |
ATCATCGTCGTTGGTGCGAT+TGG | 0.398696 | 2.1:+36275421 | None:intergenic |
TCTGTTGGTTCTGGAACATC+TGG | 0.401209 | 2.1:+36274433 | None:intergenic |
TATGGTGTTAGGTTCTGTTA+TGG | 0.402609 | 2.1:-36275627 | MS.gene81506:CDS |
ATGATAATGACCTTTCCATT+TGG | 0.411682 | 2.1:+36274469 | None:intergenic |
GAAAGTTTGGGTAAACGATC+TGG | 0.423215 | 2.1:-36274331 | MS.gene81506:CDS |
CACAAAGCTTTACCACCAAA+TGG | 0.425024 | 2.1:-36274484 | MS.gene81506:CDS |
AGGAGATGCCATACTACTTA+AGG | 0.430145 | 2.1:-36274697 | MS.gene81506:intron |
ATCATTGCTACCAGCAATGA+TGG | 0.439107 | 2.1:-36275557 | MS.gene81506:CDS |
AATTGATTCCCTTTATTGAT+GGG | 0.443973 | 2.1:+36274919 | None:intergenic |
ATATCTATGTATGAGTACTT+TGG | 0.452220 | 2.1:-36275107 | MS.gene81506:CDS |
TGACATAAATCCATCATTGC+TGG | 0.459057 | 2.1:+36275547 | None:intergenic |
ATTGTTCATCCGACCAGTTA+TGG | 0.467416 | 2.1:+36274530 | None:intergenic |
GGAACTCACACCTCACAAAC+AGG | 0.473367 | 2.1:-36275675 | MS.gene81506:CDS |
ATAATGACCTTTCCATTTGG+TGG | 0.479304 | 2.1:+36274472 | None:intergenic |
CAAGGAAGTAATAGTGAATG+AGG | 0.480422 | 2.1:-36275159 | MS.gene81506:CDS |
ATCTCGATTCATTTATGGTA+TGG | 0.481444 | 2.1:-36274407 | MS.gene81506:CDS |
TCTTGAGGGAGTATCAACTA+TGG | 0.481625 | 2.1:-36274994 | MS.gene81506:CDS |
TGTAAAGTTCCATGACTTCG+AGG | 0.482194 | 2.1:+36274269 | None:intergenic |
ATCATGTTTCTCACCGTTGG+TGG | 0.492436 | 2.1:-36274379 | MS.gene81506:CDS |
GTATTGTAGGTCTAATTTCA+AGG | 0.496292 | 2.1:-36275177 | MS.gene81506:intron |
AATCGCACCAACGACGATGA+TGG | 0.501968 | 2.1:-36275419 | MS.gene81506:CDS |
GAAGAATACAAAGGTCTTGA+GGG | 0.514865 | 2.1:-36275008 | MS.gene81506:CDS |
TGTTTCTCACCGTTGGTGGA+AGG | 0.518754 | 2.1:-36274375 | MS.gene81506:CDS |
AACATCATGTTTCTCACCGT+TGG | 0.521035 | 2.1:-36274382 | MS.gene81506:CDS |
GTTTCTCACCGTTGGTGGAA+GGG | 0.521156 | 2.1:-36274374 | MS.gene81506:CDS |
TTTCTCCATCCTCGAAGTCA+TGG | 0.521750 | 2.1:-36274278 | MS.gene81506:CDS |
GTATCAACTATGGTTGATGT+AGG | 0.524001 | 2.1:-36274984 | MS.gene81506:CDS |
CACGCCATTTACTTGTCACA+AGG | 0.531458 | 2.1:-36275312 | MS.gene81506:CDS |
ACATGCTTCCTCCAATATGT+TGG | 0.534854 | 2.1:+36274736 | None:intergenic |
TGAAGAATACAAAGGTCTTG+AGG | 0.547774 | 2.1:-36275009 | MS.gene81506:CDS |
AGTTCTTTCCCTTCCACCAA+CGG | 0.549066 | 2.1:+36274366 | None:intergenic |
ATTGCAGCATTAAGAACTGC+AGG | 0.551711 | 2.1:+36275599 | None:intergenic |
TTTGTTGATGATGAAAATGA+TGG | 0.552091 | 2.1:-36275353 | MS.gene81506:CDS |
ATCGAGTCTATTTGGTAAGT+CGG | 0.554297 | 2.1:+36275487 | None:intergenic |
AAGTTCCATGACTTCGAGGA+TGG | 0.560276 | 2.1:+36274273 | None:intergenic |
TTAGGGATCCAACATATTGG+AGG | 0.566339 | 2.1:-36274744 | MS.gene81506:intron |
CTACTGTTCACCTGTTTGTG+AGG | 0.572877 | 2.1:+36275665 | None:intergenic |
GAAAATGAACAATAATGTTG+TGG | 0.578225 | 2.1:-36275697 | None:intergenic |
AAAATGAACAATAATGTTGT+GGG | 0.579380 | 2.1:-36275696 | None:intergenic |
TAGTGATACACTCTCTGCTA+TGG | 0.581019 | 2.1:-36275645 | MS.gene81506:CDS |
TACTACTTTGAGAGTTTATG+GGG | 0.583128 | 2.1:-36275396 | MS.gene81506:CDS |
GTTGATGTAGGAGGTGGCAG+TGG | 0.588462 | 2.1:-36274972 | MS.gene81506:CDS |
GAAAATGCACCACCTACTCC+AGG | 0.597174 | 2.1:-36274876 | MS.gene81506:intron |
GTTGATGATGAAAATGATGG+TGG | 0.599361 | 2.1:-36275350 | MS.gene81506:CDS |
ATGAATCGAGATGCGTCTGT+TGG | 0.600546 | 2.1:+36274418 | None:intergenic |
AGTAGTATGGCATCTCCTTG+TGG | 0.601193 | 2.1:+36274702 | None:intergenic |
TCAACTATGGTTGATGTAGG+AGG | 0.605473 | 2.1:-36274981 | MS.gene81506:CDS |
ACTATGGTTGATGTAGGAGG+TGG | 0.606248 | 2.1:-36274978 | MS.gene81506:CDS |
AGTAGTACCATCATCGTCGT+TGG | 0.608196 | 2.1:+36275412 | None:intergenic |
AATAGGTTACCTGGAGTAGG+TGG | 0.622764 | 2.1:+36274867 | None:intergenic |
AGCTTTACCACCAAATGGAA+AGG | 0.624460 | 2.1:-36274479 | MS.gene81506:CDS |
ACAAGGCTTTGTTTGGAATG+TGG | 0.625990 | 2.1:-36275295 | MS.gene81506:intron |
AGAAATAGGTTACCTGGAGT+AGG | 0.627597 | 2.1:+36274864 | None:intergenic |
GAGTGTATGCCATAACTGGT+CGG | 0.668148 | 2.1:-36274539 | MS.gene81506:CDS |
AGAATCGTTGAAGAATACAA+AGG | 0.668990 | 2.1:-36275017 | MS.gene81506:CDS |
ATGTTTGAAAGTGTTCCACA+AGG | 0.704402 | 2.1:-36274717 | MS.gene81506:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTAAATTTGTATTGT+AGG | - | chr2.1:36274757-36274776 | MS.gene81506:intron | 10.0% |
!! | AAAATTACCAAATTTCATTT+AGG | - | chr2.1:36275185-36275204 | MS.gene81506:intron | 15.0% |
!! | AAATTACCAAATTTCATTTA+GGG | - | chr2.1:36275186-36275205 | MS.gene81506:intron | 15.0% |
!! | TTGAAAGAATATGAAAGTTT+GGG | - | chr2.1:36275604-36275623 | MS.gene81506:CDS | 20.0% |
!! | TTTGAAAGAATATGAAAGTT+TGG | - | chr2.1:36275603-36275622 | MS.gene81506:CDS | 20.0% |
!!! | TATATATCAACATTTTTGCA+TGG | + | chr2.1:36274735-36274754 | None:intergenic | 20.0% |
! | AATGTAATCACAAGAGAAAT+AGG | + | chr2.1:36275100-36275119 | None:intergenic | 25.0% |
! | ATATCTATGTATGAGTACTT+TGG | - | chr2.1:36274840-36274859 | MS.gene81506:intron | 25.0% |
! | TTCCATTAACTTTCTTGAAT+AGG | + | chr2.1:36274821-36274840 | None:intergenic | 25.0% |
!! | AAATTGATTCCCTTTATTGA+TGG | + | chr2.1:36275032-36275051 | None:intergenic | 25.0% |
!! | AATTGATTCCCTTTATTGAT+GGG | + | chr2.1:36275031-36275050 | None:intergenic | 25.0% |
!!! | TTTGTTGATGATGAAAATGA+TGG | - | chr2.1:36274594-36274613 | MS.gene81506:intron | 25.0% |
AGAATCGTTGAAGAATACAA+AGG | - | chr2.1:36274930-36274949 | MS.gene81506:CDS | 30.0% | |
ATCTCGATTCATTTATGGTA+TGG | - | chr2.1:36275540-36275559 | MS.gene81506:CDS | 30.0% | |
GACCTATTCAAGAAAGTTAA+TGG | - | chr2.1:36274816-36274835 | MS.gene81506:intron | 30.0% | |
GTATTGTAGGTCTAATTTCA+AGG | - | chr2.1:36274770-36274789 | MS.gene81506:intron | 30.0% | |
TTGGATCCCTAAATGAAATT+TGG | + | chr2.1:36275195-36275214 | None:intergenic | 30.0% | |
! | ATGATAATGACCTTTCCATT+TGG | + | chr2.1:36275481-36275500 | None:intergenic | 30.0% |
! | GTACTACTTTGAGAGTTTAT+GGG | - | chr2.1:36274550-36274569 | MS.gene81506:intron | 30.0% |
! | TACTACTTTGAGAGTTTATG+GGG | - | chr2.1:36274551-36274570 | MS.gene81506:intron | 30.0% |
!! | GAAAATGATGGTGGTTATTT+GGG | - | chr2.1:36274606-36274625 | MS.gene81506:intron | 30.0% |
!! | TGAAAATGATGGTGGTTATT+TGG | - | chr2.1:36274605-36274624 | MS.gene81506:intron | 30.0% |
ATAATGACCTTTCCATTTGG+TGG | + | chr2.1:36275478-36275497 | None:intergenic | 35.0% | |
ATCGAGTCTATTTGGTAAGT+CGG | + | chr2.1:36274463-36274482 | None:intergenic | 35.0% | |
CAAGGAAGTAATAGTGAATG+AGG | - | chr2.1:36274788-36274807 | MS.gene81506:intron | 35.0% | |
CATTTAGGGATCCAACATAT+TGG | - | chr2.1:36275200-36275219 | MS.gene81506:intron | 35.0% | |
GAAGAATACAAAGGTCTTGA+GGG | - | chr2.1:36274939-36274958 | MS.gene81506:CDS | 35.0% | |
GCCAAATACCCATCAATAAA+GGG | - | chr2.1:36275020-36275039 | MS.gene81506:CDS | 35.0% | |
TGAAGAATACAAAGGTCTTG+AGG | - | chr2.1:36274938-36274957 | MS.gene81506:CDS | 35.0% | |
TGACATAAATCCATCATTGC+TGG | + | chr2.1:36274403-36274422 | None:intergenic | 35.0% | |
TGCCAAATACCCATCAATAA+AGG | - | chr2.1:36275019-36275038 | MS.gene81506:CDS | 35.0% | |
! | AAAGCCTTGTGACAAGTAAA+TGG | + | chr2.1:36274642-36274661 | None:intergenic | 35.0% |
! | GGTACTACTTTGAGAGTTTA+TGG | - | chr2.1:36274549-36274568 | MS.gene81506:intron | 35.0% |
! | GTATCAACTATGGTTGATGT+AGG | - | chr2.1:36274963-36274982 | MS.gene81506:CDS | 35.0% |
! | TATGGTGTTAGGTTCTGTTA+TGG | - | chr2.1:36274320-36274339 | MS.gene81506:CDS | 35.0% |
! | TCCCTTTATTGATGGGTATT+TGG | + | chr2.1:36275024-36275043 | None:intergenic | 35.0% |
! | TTTAGAGTGTATGCCATAAC+TGG | - | chr2.1:36275404-36275423 | MS.gene81506:CDS | 35.0% |
!! | ATGTTTGAAAGTGTTCCACA+AGG | - | chr2.1:36275230-36275249 | MS.gene81506:intron | 35.0% |
!! | GTTGATGATGAAAATGATGG+TGG | - | chr2.1:36274597-36274616 | MS.gene81506:intron | 35.0% |
AACATCATGTTTCTCACCGT+TGG | - | chr2.1:36275565-36275584 | MS.gene81506:CDS | 40.0% | |
AAGACACGATCGAGTCTATT+TGG | + | chr2.1:36274471-36274490 | None:intergenic | 40.0% | |
ACATGCTTCCTCCAATATGT+TGG | + | chr2.1:36275214-36275233 | None:intergenic | 40.0% | |
AGAAATAGGTTACCTGGAGT+AGG | + | chr2.1:36275086-36275105 | None:intergenic | 40.0% | |
AGCTTTACCACCAAATGGAA+AGG | - | chr2.1:36275468-36275487 | MS.gene81506:CDS | 40.0% | |
AGGAGATGCCATACTACTTA+AGG | - | chr2.1:36275250-36275269 | MS.gene81506:intron | 40.0% | |
ATCATTGCTACCAGCAATGA+TGG | - | chr2.1:36274390-36274409 | MS.gene81506:CDS | 40.0% | |
ATTGCAGCATTAAGAACTGC+AGG | + | chr2.1:36274351-36274370 | None:intergenic | 40.0% | |
ATTGTTCATCCGACCAGTTA+TGG | + | chr2.1:36275420-36275439 | None:intergenic | 40.0% | |
CACAAAGCTTTACCACCAAA+TGG | - | chr2.1:36275463-36275482 | MS.gene81506:CDS | 40.0% | |
CACAAGAGAAATAGGTTACC+TGG | + | chr2.1:36275092-36275111 | None:intergenic | 40.0% | |
CACACTGACCTTAAGTAGTA+TGG | + | chr2.1:36275261-36275280 | None:intergenic | 40.0% | |
GAAAGTTTGGGTAAACGATC+TGG | - | chr2.1:36275616-36275635 | MS.gene81506:CDS | 40.0% | |
GACGCATCTCGATTCATTTA+TGG | - | chr2.1:36275535-36275554 | MS.gene81506:CDS | 40.0% | |
TAGTGATACACTCTCTGCTA+TGG | - | chr2.1:36274302-36274321 | MS.gene81506:CDS | 40.0% | |
TGTAAAGTTCCATGACTTCG+AGG | + | chr2.1:36275681-36275700 | None:intergenic | 40.0% | |
TTAGGGATCCAACATATTGG+AGG | - | chr2.1:36275203-36275222 | MS.gene81506:intron | 40.0% | |
! | GGTGCATTTTCAATGACTTG+AGG | + | chr2.1:36275062-36275081 | None:intergenic | 40.0% |
! | TCAACTATGGTTGATGTAGG+AGG | - | chr2.1:36274966-36274985 | MS.gene81506:CDS | 40.0% |
!! | ACAAGGCTTTGTTTGGAATG+TGG | - | chr2.1:36274652-36274671 | MS.gene81506:intron | 40.0% |
!! | ACTTGTCACAAGGCTTTGTT+TGG | - | chr2.1:36274645-36274664 | MS.gene81506:intron | 40.0% |
!! | TCTTGAGGGAGTATCAACTA+TGG | - | chr2.1:36274953-36274972 | MS.gene81506:CDS | 40.0% |
AAGTTCCATGACTTCGAGGA+TGG | + | chr2.1:36275677-36275696 | None:intergenic | 45.0% | |
AATAGGTTACCTGGAGTAGG+TGG | + | chr2.1:36275083-36275102 | None:intergenic | 45.0% | |
ACACTCTCTGCTATGGTGTT+AGG | - | chr2.1:36274309-36274328 | MS.gene81506:CDS | 45.0% | |
AGTAGTACCATCATCGTCGT+TGG | + | chr2.1:36274538-36274557 | None:intergenic | 45.0% | |
AGTAGTATGGCATCTCCTTG+TGG | + | chr2.1:36275248-36275267 | None:intergenic | 45.0% | |
AGTTCTTTCCCTTCCACCAA+CGG | + | chr2.1:36275584-36275603 | None:intergenic | 45.0% | |
ATCATGTTTCTCACCGTTGG+TGG | - | chr2.1:36275568-36275587 | MS.gene81506:CDS | 45.0% | |
ATGAATCGAGATGCGTCTGT+TGG | + | chr2.1:36275532-36275551 | None:intergenic | 45.0% | |
CACGCCATTTACTTGTCACA+AGG | - | chr2.1:36274635-36274654 | MS.gene81506:intron | 45.0% | |
CTACTGTTCACCTGTTTGTG+AGG | + | chr2.1:36274285-36274304 | None:intergenic | 45.0% | |
GAGTGTATGCCATAACTGGT+CGG | - | chr2.1:36275408-36275427 | MS.gene81506:CDS | 45.0% | |
GTTTATGGGGTCACTTCTTC+TGG | - | chr2.1:36274564-36274583 | MS.gene81506:intron | 45.0% | |
TTTCTCCATCCTCGAAGTCA+TGG | - | chr2.1:36275669-36275688 | MS.gene81506:CDS | 45.0% | |
! | ACTATGGTTGATGTAGGAGG+TGG | - | chr2.1:36274969-36274988 | MS.gene81506:CDS | 45.0% |
!! | GGTAAGTCGGAGTGTTGATT+TGG | + | chr2.1:36274450-36274469 | None:intergenic | 45.0% |
!! | TCTGTTGGTTCTGGAACATC+TGG | + | chr2.1:36275517-36275536 | None:intergenic | 45.0% |
AATCGCACCAACGACGATGA+TGG | - | chr2.1:36274528-36274547 | MS.gene81506:CDS | 50.0% | |
ATCATCGTCGTTGGTGCGAT+TGG | + | chr2.1:36274529-36274548 | None:intergenic | 50.0% | |
GAAAATGCACCACCTACTCC+AGG | - | chr2.1:36275071-36275090 | MS.gene81506:CDS | 50.0% | |
GGAACTCACACCTCACAAAC+AGG | - | chr2.1:36274272-36274291 | MS.gene81506:CDS | 50.0% | |
! | GTTTCTCACCGTTGGTGGAA+GGG | - | chr2.1:36275573-36275592 | MS.gene81506:CDS | 50.0% |
! | TGTTTCTCACCGTTGGTGGA+AGG | - | chr2.1:36275572-36275591 | MS.gene81506:CDS | 50.0% |
GTTGATGTAGGAGGTGGCAG+TGG | - | chr2.1:36274975-36274994 | MS.gene81506:CDS | 55.0% | |
!! | CGAGATGCGTCTGTTGGTTC+TGG | + | chr2.1:36275526-36275545 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 36274264 | 36275705 | 36274264 | ID=MS.gene81506 |
chr2.1 | mRNA | 36274264 | 36275705 | 36274264 | ID=MS.gene81506.t1;Parent=MS.gene81506 |
chr2.1 | exon | 36275296 | 36275705 | 36275296 | ID=MS.gene81506.t1.exon1;Parent=MS.gene81506.t1 |
chr2.1 | CDS | 36275296 | 36275705 | 36275296 | ID=cds.MS.gene81506.t1;Parent=MS.gene81506.t1 |
chr2.1 | exon | 36274877 | 36275190 | 36274877 | ID=MS.gene81506.t1.exon2;Parent=MS.gene81506.t1 |
chr2.1 | CDS | 36274877 | 36275190 | 36274877 | ID=cds.MS.gene81506.t1;Parent=MS.gene81506.t1 |
chr2.1 | exon | 36274698 | 36274762 | 36274698 | ID=MS.gene81506.t1.exon3;Parent=MS.gene81506.t1 |
chr2.1 | CDS | 36274698 | 36274762 | 36274698 | ID=cds.MS.gene81506.t1;Parent=MS.gene81506.t1 |
chr2.1 | exon | 36274264 | 36274560 | 36274264 | ID=MS.gene81506.t1.exon4;Parent=MS.gene81506.t1 |
chr2.1 | CDS | 36274264 | 36274560 | 36274264 | ID=cds.MS.gene81506.t1;Parent=MS.gene81506.t1 |
Gene Sequence |
Protein sequence |