Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071858.t1 | XP_013463153.1 | 97.5 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 2.20E-83 | 318.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071858.t1 | P17642 | 52.2 | 159 | 71 | 2 | 1 | 159 | 1 | 154 | 7.4e-43 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071858.t1 | A0A072V725 | 97.5 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 1.6e-83 | 318.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene071858 | -0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene071858 | -0.808819 | 2.57E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene071858 | 0.824916 | 6.23E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene071858 | 0.821983 | 3.02E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene071858 | -0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene049634 | MS.gene071858 | 0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene071858 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene050096 | MS.gene071858 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene071858 | -0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene071858 | 0.833839 | 4.24E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene071858 | -0.81287 | 3.41E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene071858 | -0.803568 | 3.28E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene071858 | -0.818227 | 2.19E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene071858 | -0.802514 | 5.41E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene071858 | -0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene071858 | -0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene071858 | -0.81029 | 1.24E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene071858 | 0.806912 | 6.53E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene071858 | 0.828568 | 8.36E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene071858 | 0.82715 | 1.83E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene071858 | 0.808824 | 2.56E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene071858 | 0.811227 | 7.78E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene071858 | 0.825629 | 4.22E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene071858 | 0.828462 | 8.87E-55 | -1.69E-46 |
| MS.gene051422 | MS.gene071858 | 0.803436 | 3.49E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene071858 | 0.81396 | 1.96E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene071858 | 0.863867 | 1.83E-64 | -1.69E-46 |
| MS.gene052606 | MS.gene071858 | 0.814923 | 1.20E-51 | -1.69E-46 |
| MS.gene053031 | MS.gene071858 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene071858 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene071858 | 0.833846 | 4.22E-56 | -1.69E-46 |
| MS.gene053488 | MS.gene071858 | 0.820033 | 8.49E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene071858 | -0.806301 | 8.79E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene071858 | 0.824111 | 9.63E-54 | -1.69E-46 |
| MS.gene054146 | MS.gene071858 | 0.839194 | 1.83E-57 | -1.69E-46 |
| MS.gene054707 | MS.gene071858 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene071858 | 0.808448 | 3.08E-50 | -1.69E-46 |
| MS.gene05483 | MS.gene071858 | 0.808617 | 2.84E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene071858 | 0.826575 | 2.52E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene071858 | 0.84027 | 9.62E-58 | -1.69E-46 |
| MS.gene055202 | MS.gene071858 | 0.801465 | 8.89E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene071858 | -0.805689 | 1.18E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene071858 | -0.827534 | 1.48E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene071858 | -0.804448 | 2.15E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene071858 | -0.831608 | 1.52E-55 | -1.69E-46 |
| MS.gene055942 | MS.gene071858 | 0.808839 | 2.54E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene071858 | 0.81121 | 7.85E-51 | -1.69E-46 |
| MS.gene056358 | MS.gene071858 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene056359 | MS.gene071858 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene071858 | -0.823501 | 1.34E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene071858 | 0.8176 | 3.03E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene071858 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene071858 | -0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene056748 | MS.gene071858 | 0.812074 | 5.09E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene071858 | 0.844772 | 6.14E-59 | -1.69E-46 |
| MS.gene057261 | MS.gene071858 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene071858 | 0.808762 | 2.64E-50 | -1.69E-46 |
| MS.gene057547 | MS.gene071858 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene057548 | MS.gene071858 | 0.81714 | 3.85E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene071858 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene071858 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene071858 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene071858 | 0.830285 | 3.20E-55 | -1.69E-46 |
| MS.gene058109 | MS.gene071858 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene058111 | MS.gene071858 | 0.804966 | 1.68E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene071858 | 0.812285 | 4.58E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene071858 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene058175 | MS.gene071858 | 0.813135 | 2.98E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene071858 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene071858 | 0.800102 | 1.69E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene071858 | -0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene071858 | -0.817453 | 3.27E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene071858 | 0.844861 | 5.82E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene071858 | -0.814035 | 1.89E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene071858 | -0.814355 | 1.61E-51 | -1.69E-46 |
| MS.gene059060 | MS.gene071858 | 0.887548 | 1.29E-72 | -1.69E-46 |
| MS.gene059718 | MS.gene071858 | -0.801508 | 8.71E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene071858 | -0.822267 | 2.60E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene071858 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene059955 | MS.gene071858 | 0.824734 | 6.87E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene071858 | 0.817327 | 3.49E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene071858 | 0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene071858 | -0.819296 | 1.25E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene071858 | -0.80885 | 2.53E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene071858 | -0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene071858 | 0.800766 | 1.24E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071858.t1 | MTR_2g435310 | 97.500 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 4.40e-114 | 320 |
| MS.gene071858.t1 | MTR_4g120760 | 74.843 | 159 | 40 | 0 | 1 | 159 | 1 | 159 | 9.87e-90 | 258 |
| MS.gene071858.t1 | MTR_4g120760 | 74.214 | 159 | 41 | 0 | 1 | 159 | 1 | 159 | 5.46e-89 | 256 |
| MS.gene071858.t1 | MTR_2g035100 | 41.026 | 156 | 91 | 1 | 1 | 156 | 1 | 155 | 2.67e-39 | 130 |
| MS.gene071858.t1 | MTR_2g035105 | 39.490 | 157 | 94 | 1 | 1 | 157 | 1 | 156 | 8.33e-38 | 127 |
| MS.gene071858.t1 | MTR_2g035150 | 38.854 | 157 | 95 | 1 | 1 | 157 | 1 | 156 | 9.08e-37 | 124 |
| MS.gene071858.t1 | MTR_2g035130 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 3.29e-36 | 123 |
| MS.gene071858.t1 | MTR_2g035120 | 37.580 | 157 | 97 | 1 | 1 | 157 | 1 | 156 | 6.02e-36 | 122 |
| MS.gene071858.t1 | MTR_6g033450 | 37.821 | 156 | 96 | 1 | 1 | 156 | 1 | 155 | 2.75e-33 | 115 |
| MS.gene071858.t1 | MTR_4g120970 | 37.821 | 156 | 96 | 1 | 1 | 156 | 1 | 155 | 2.75e-33 | 115 |
| MS.gene071858.t1 | MTR_2g035320 | 32.051 | 156 | 105 | 1 | 1 | 156 | 1 | 155 | 1.14e-29 | 106 |
| MS.gene071858.t1 | MTR_2g035170 | 36.184 | 152 | 94 | 2 | 7 | 156 | 5 | 155 | 2.57e-29 | 105 |
| MS.gene071858.t1 | MTR_2g035210 | 31.410 | 156 | 106 | 1 | 1 | 156 | 1 | 155 | 6.11e-29 | 104 |
| MS.gene071858.t1 | MTR_2g035220 | 31.126 | 151 | 103 | 1 | 6 | 156 | 6 | 155 | 9.62e-29 | 103 |
| MS.gene071858.t1 | MTR_2g035190 | 30.769 | 156 | 107 | 1 | 1 | 156 | 1 | 155 | 1.14e-27 | 101 |
| MS.gene071858.t1 | MTR_4g120950 | 34.177 | 158 | 100 | 3 | 1 | 156 | 1 | 156 | 7.51e-26 | 96.7 |
| MS.gene071858.t1 | MTR_2g035320 | 32.222 | 90 | 61 | 0 | 67 | 156 | 31 | 120 | 4.85e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAACCTCCATCATTAA+TGG | 0.267686 | 2.2:+53496144 | None:intergenic |
| ACTAGCAAATACAATGCTAT+TGG | 0.309101 | 2.2:-53496112 | MS.gene071858:CDS |
| CTAGCAAATACAATGCTATT+GGG | 0.326067 | 2.2:-53496111 | MS.gene071858:CDS |
| ATGAACTGAGGTAAGAGTTT+TGG | 0.327571 | 2.2:+53496829 | None:intergenic |
| GCTTGAGTCAATTGCTTATG+AGG | 0.335592 | 2.2:-53496179 | MS.gene071858:CDS |
| TTCCAGCTTCTCCATTTCCT+TGG | 0.338136 | 2.2:+53496788 | None:intergenic |
| AGTCAAAGAGGAAGAGATAA+AGG | 0.347021 | 2.2:-53496080 | MS.gene071858:CDS |
| GACTCAAGCTTGTCACCTAA+TGG | 0.355452 | 2.2:+53496193 | None:intergenic |
| ACATACGTGATGGAGCTATA+GGG | 0.397093 | 2.2:+53496887 | None:intergenic |
| AACATACGTGATGGAGCTAT+AGG | 0.429571 | 2.2:+53496886 | None:intergenic |
| AGGAAGAGATAAAGGAAGGA+AGG | 0.431527 | 2.2:-53496072 | MS.gene071858:CDS |
| AGCTCCATCACGTATGTTCA+AGG | 0.432574 | 2.2:-53496881 | MS.gene071858:CDS |
| GTCAACGTAATCCAAGGAAA+TGG | 0.442764 | 2.2:-53496799 | MS.gene071858:CDS |
| TGCTTATGAGGTTAAGTTTG+AGG | 0.448209 | 2.2:-53496167 | MS.gene071858:CDS |
| CACAACTTTGCAAATTCCAA+TGG | 0.469640 | 2.2:+53496042 | None:intergenic |
| AAGTTTGAGGCCATTAATGA+TGG | 0.470153 | 2.2:-53496154 | MS.gene071858:CDS |
| GGAAGAATAATTATTTGTAA+AGG | 0.473368 | 2.2:+53496909 | None:intergenic |
| AGTTGTGGAAGCATACTTGC+TGG | 0.476134 | 2.2:-53496026 | MS.gene071858:CDS |
| ATCCAAGGAAATGGAGAAGC+TGG | 0.480647 | 2.2:-53496790 | MS.gene071858:CDS |
| ATGATTGAAGGAGATCCATT+AGG | 0.495029 | 2.2:-53496208 | MS.gene071858:CDS |
| CATTGGAATTTGCAAAGTTG+TGG | 0.510944 | 2.2:-53496041 | MS.gene071858:CDS |
| GGAAGAGATAAAGGAAGGAA+GGG | 0.516313 | 2.2:-53496071 | MS.gene071858:CDS |
| TGCAACTACACTATGATTGA+AGG | 0.519866 | 2.2:-53496220 | MS.gene071858:CDS |
| GAAGGAAGGGAAAACTCCAT+TGG | 0.523267 | 2.2:-53496058 | MS.gene071858:CDS |
| AAAGAGGAAGAGATAAAGGA+AGG | 0.532049 | 2.2:-53496076 | MS.gene071858:CDS |
| TATGATTGATAATGATAACT+TGG | 0.540241 | 2.2:-53496245 | MS.gene071858:CDS |
| CATACGTGATGGAGCTATAG+GGG | 0.547471 | 2.2:+53496888 | None:intergenic |
| TTTGAGGCCATTAATGATGG+AGG | 0.588869 | 2.2:-53496151 | MS.gene071858:CDS |
| AAAGATGTCAACGTAATCCA+AGG | 0.591971 | 2.2:-53496805 | MS.gene071858:CDS |
| TAGCAAATACAATGCTATTG+GGG | 0.598363 | 2.2:-53496110 | MS.gene071858:CDS |
| AATAACTAAACATAGACTTG+TGG | 0.600652 | 2.2:+53495998 | None:intergenic |
| AAAGCCTTGAACATACGTGA+TGG | 0.622247 | 2.2:+53496877 | None:intergenic |
| TGTAAAGGTTGAGACGACCA+TGG | 0.669945 | 2.2:+53496924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATGAATGATAAAATTTAA+AGG | - | chr2.2:53496435-53496454 | MS.gene071858:intron | 15.0% |
| !! | ACCTCAAATAAAAAATATTT+AGG | - | chr2.2:53496405-53496424 | MS.gene071858:intron | 15.0% |
| !!! | AAAAAAAAACATTTTAAAGC+TGG | - | chr2.2:53496199-53496218 | MS.gene071858:CDS | 15.0% |
| !!! | TTTTCTTTTTTTCTTTATGT+TGG | - | chr2.2:53496270-53496289 | MS.gene071858:CDS | 15.0% |
| !! | AACCCTAAATAAGATTTATT+TGG | + | chr2.2:53496553-53496572 | None:intergenic | 20.0% |
| !! | ACCCTAAATAAGATTTATTT+GGG | + | chr2.2:53496552-53496571 | None:intergenic | 20.0% |
| !! | CTTTCAAATATTTGAAAAAC+AGG | - | chr2.2:53496652-53496671 | MS.gene071858:intron | 20.0% |
| !! | GGAAGAATAATTATTTGTAA+AGG | + | chr2.2:53496019-53496038 | None:intergenic | 20.0% |
| !!! | ATAAGTAAGAATTGTTATTG+AGG | + | chr2.2:53496605-53496624 | None:intergenic | 20.0% |
| !!! | CTGTTTTTCAAATATTTGAA+AGG | + | chr2.2:53496654-53496673 | None:intergenic | 20.0% |
| !!! | GCCTAAATATTTTTTATTTG+AGG | + | chr2.2:53496409-53496428 | None:intergenic | 20.0% |
| !!! | TATGATTGATAATGATAACT+TGG | - | chr2.2:53496680-53496699 | MS.gene071858:intron | 20.0% |
| !! | GCCCAAATAAATCTTATTTA+GGG | - | chr2.2:53496548-53496567 | MS.gene071858:intron | 25.0% |
| !! | TGCCCAAATAAATCTTATTT+AGG | - | chr2.2:53496547-53496566 | MS.gene071858:intron | 25.0% |
| AAAACAACCTCCATCATTAA+TGG | + | chr2.2:53496784-53496803 | None:intergenic | 30.0% | |
| ACTAGCAAATACAATGCTAT+TGG | - | chr2.2:53496813-53496832 | MS.gene071858:CDS | 30.0% | |
| CTAGCAAATACAATGCTATT+GGG | - | chr2.2:53496814-53496833 | MS.gene071858:CDS | 30.0% | |
| TAGCAAATACAATGCTATTG+GGG | - | chr2.2:53496815-53496834 | MS.gene071858:CDS | 30.0% | |
| ! | AATTGTTATTGAGGCAACAT+AGG | + | chr2.2:53496596-53496615 | None:intergenic | 30.0% |
| ! | GAACAAGTTAATTTTGCTGA+AGG | - | chr2.2:53496165-53496184 | MS.gene071858:CDS | 30.0% |
| ! | TTGACATCTTTTATGAACTG+AGG | + | chr2.2:53496111-53496130 | None:intergenic | 30.0% |
| AAAGAGGAAGAGATAAAGGA+AGG | - | chr2.2:53496849-53496868 | MS.gene071858:CDS | 35.0% | |
| AAAGATGTCAACGTAATCCA+AGG | - | chr2.2:53496120-53496139 | MS.gene071858:CDS | 35.0% | |
| AGTCAAAGAGGAAGAGATAA+AGG | - | chr2.2:53496845-53496864 | MS.gene071858:CDS | 35.0% | |
| ATGATTGAAGGAGATCCATT+AGG | - | chr2.2:53496717-53496736 | MS.gene071858:intron | 35.0% | |
| CACAACTTTGCAAATTCCAA+TGG | + | chr2.2:53496886-53496905 | None:intergenic | 35.0% | |
| CATTGGAATTTGCAAAGTTG+TGG | - | chr2.2:53496884-53496903 | MS.gene071858:CDS | 35.0% | |
| GTTGCGAGAAATACTTAGTT+TGG | - | chr2.2:53496378-53496397 | MS.gene071858:intron | 35.0% | |
| TGCAACTACACTATGATTGA+AGG | - | chr2.2:53496705-53496724 | MS.gene071858:intron | 35.0% | |
| TGCTTATGAGGTTAAGTTTG+AGG | - | chr2.2:53496758-53496777 | MS.gene071858:intron | 35.0% | |
| ! | AAGTTTGAGGCCATTAATGA+TGG | - | chr2.2:53496771-53496790 | MS.gene071858:CDS | 35.0% |
| ! | ATGAACTGAGGTAAGAGTTT+TGG | + | chr2.2:53496099-53496118 | None:intergenic | 35.0% |
| AAAGCCTTGAACATACGTGA+TGG | + | chr2.2:53496051-53496070 | None:intergenic | 40.0% | |
| AGGAAGAGATAAAGGAAGGA+AGG | - | chr2.2:53496853-53496872 | MS.gene071858:CDS | 40.0% | |
| GCTTGAGTCAATTGCTTATG+AGG | - | chr2.2:53496746-53496765 | MS.gene071858:intron | 40.0% | |
| GGAAGAGATAAAGGAAGGAA+GGG | - | chr2.2:53496854-53496873 | MS.gene071858:CDS | 40.0% | |
| GTCAACGTAATCCAAGGAAA+TGG | - | chr2.2:53496126-53496145 | MS.gene071858:CDS | 40.0% | |
| ! | AACATACGTGATGGAGCTAT+AGG | + | chr2.2:53496042-53496061 | None:intergenic | 40.0% |
| ! | ACATACGTGATGGAGCTATA+GGG | + | chr2.2:53496041-53496060 | None:intergenic | 40.0% |
| ! | TTTGAGGCCATTAATGATGG+AGG | - | chr2.2:53496774-53496793 | MS.gene071858:CDS | 40.0% |
| !!! | TGGGGATTTTGAAGTCAAAG+AGG | - | chr2.2:53496833-53496852 | MS.gene071858:CDS | 40.0% |
| AGCTCCATCACGTATGTTCA+AGG | - | chr2.2:53496044-53496063 | MS.gene071858:CDS | 45.0% | |
| ATCCAAGGAAATGGAGAAGC+TGG | - | chr2.2:53496135-53496154 | MS.gene071858:CDS | 45.0% | |
| GAAGGAAGGGAAAACTCCAT+TGG | - | chr2.2:53496867-53496886 | MS.gene071858:CDS | 45.0% | |
| GACTCAAGCTTGTCACCTAA+TGG | + | chr2.2:53496735-53496754 | None:intergenic | 45.0% | |
| TTCCAGCTTCTCCATTTCCT+TGG | + | chr2.2:53496140-53496159 | None:intergenic | 45.0% | |
| ! | AGTTGTGGAAGCATACTTGC+TGG | - | chr2.2:53496899-53496918 | MS.gene071858:CDS | 45.0% |
| ! | CATACGTGATGGAGCTATAG+GGG | + | chr2.2:53496040-53496059 | None:intergenic | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 53496003 | 53496944 | 53496003 | ID=MS.gene071858 |
| chr2.2 | mRNA | 53496003 | 53496944 | 53496003 | ID=MS.gene071858.t1;Parent=MS.gene071858 |
| chr2.2 | exon | 53496761 | 53496944 | 53496761 | ID=MS.gene071858.t1.exon1;Parent=MS.gene071858.t1 |
| chr2.2 | CDS | 53496761 | 53496944 | 53496761 | ID=cds.MS.gene071858.t1;Parent=MS.gene071858.t1 |
| chr2.2 | exon | 53496003 | 53496301 | 53496003 | ID=MS.gene071858.t1.exon2;Parent=MS.gene071858.t1 |
| chr2.2 | CDS | 53496003 | 53496301 | 53496003 | ID=cds.MS.gene071858.t1;Parent=MS.gene071858.t1 |
| Gene Sequence |
| Protein sequence |
