Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54577.t1 | XP_013456263.1 | 95.3 | 531 | 15 | 1 | 1 | 521 | 1 | 531 | 3.60E-300 | 1040 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54577.t1 | B8AVF0 | 64.2 | 477 | 161 | 1 | 39 | 505 | 34 | 510 | 2.9e-189 | 662.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54577.t1 | A0A072UKL7 | 95.3 | 531 | 15 | 1 | 1 | 521 | 1 | 531 | 2.6e-300 | 1040.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene54577 | -0.802146 | 6.44E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene54577 | -0.800987 | 1.11E-48 | -1.69E-46 |
| MS.gene049320 | MS.gene54577 | -0.823642 | 1.24E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene54577 | 0.837074 | 6.44E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene54577 | 0.831179 | 1.93E-55 | -1.69E-46 |
| MS.gene050095 | MS.gene54577 | 0.809512 | 1.82E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene54577 | 0.850963 | 1.21E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene54577 | -0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene54577 | -0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene54577 | -0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene54577 | -0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene050883 | MS.gene54577 | 0.836275 | 1.03E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene54577 | 0.819964 | 8.81E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene54577 | 0.864461 | 1.20E-64 | -1.69E-46 |
| MS.gene051138 | MS.gene54577 | 0.838102 | 3.51E-57 | -1.69E-46 |
| MS.gene051364 | MS.gene54577 | 0.81043 | 1.16E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene54577 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene54577 | 0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene54577 | 0.829306 | 5.54E-55 | -1.69E-46 |
| MS.gene05244 | MS.gene54577 | 0.816588 | 5.12E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene54577 | -0.804578 | 2.02E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene54577 | 0.868831 | 4.87E-66 | -1.69E-46 |
| MS.gene053479 | MS.gene54577 | -0.803951 | 2.73E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene54577 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene54577 | 0.809396 | 1.93E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene54577 | 0.844067 | 9.51E-59 | -1.69E-46 |
| MS.gene054146 | MS.gene54577 | 0.81932 | 1.24E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene54577 | 0.827146 | 1.84E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene54577 | 0.8115 | 6.79E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene54577 | 0.807082 | 6.01E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene54577 | 0.836541 | 8.81E-57 | -1.69E-46 |
| MS.gene055139 | MS.gene54577 | 0.818571 | 1.83E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene54577 | 0.856318 | 3.49E-62 | -1.69E-46 |
| MS.gene055202 | MS.gene54577 | 0.803374 | 3.59E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene54577 | -0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene54577 | -0.819789 | 9.66E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene54577 | -0.814457 | 1.53E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene54577 | -0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene055959 | MS.gene54577 | 0.821515 | 3.87E-53 | -1.69E-46 |
| MS.gene056218 | MS.gene54577 | 0.819833 | 9.44E-53 | -1.69E-46 |
| MS.gene056224 | MS.gene54577 | 0.825918 | 3.61E-54 | -1.69E-46 |
| MS.gene056310 | MS.gene54577 | 0.82058 | 6.36E-53 | -1.69E-46 |
| MS.gene056311 | MS.gene54577 | 0.822377 | 2.45E-53 | -1.69E-46 |
| MS.gene056313 | MS.gene54577 | 0.823397 | 1.42E-53 | -1.69E-46 |
| MS.gene056358 | MS.gene54577 | 0.815483 | 9.03E-52 | -1.69E-46 |
| MS.gene056359 | MS.gene54577 | 0.864476 | 1.18E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene54577 | -0.81926 | 1.27E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene54577 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene54577 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene54577 | -0.808224 | 3.44E-50 | -1.69E-46 |
| MS.gene056715 | MS.gene54577 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene056856 | MS.gene54577 | 0.821599 | 3.71E-53 | -1.69E-46 |
| MS.gene056920 | MS.gene54577 | 0.803729 | 3.03E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene54577 | 0.830529 | 2.79E-55 | -1.69E-46 |
| MS.gene057544 | MS.gene54577 | 0.821954 | 3.07E-53 | -1.69E-46 |
| MS.gene057547 | MS.gene54577 | 0.819322 | 1.23E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene54577 | 0.818185 | 2.24E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene54577 | 0.824019 | 1.01E-53 | -1.69E-46 |
| MS.gene058093 | MS.gene54577 | 0.834782 | 2.46E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene54577 | 0.854111 | 1.53E-61 | -1.69E-46 |
| MS.gene058109 | MS.gene54577 | 0.833794 | 4.35E-56 | -1.69E-46 |
| MS.gene058111 | MS.gene54577 | 0.812969 | 3.25E-51 | -1.69E-46 |
| MS.gene058117 | MS.gene54577 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene54577 | 0.825868 | 3.71E-54 | -1.69E-46 |
| MS.gene058173 | MS.gene54577 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene54577 | 0.82533 | 4.97E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene54577 | 0.809858 | 1.54E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene54577 | 0.808274 | 3.36E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene54577 | 0.806527 | 7.88E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene54577 | -0.813552 | 2.42E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene54577 | -0.817609 | 3.02E-52 | -1.69E-46 |
| MS.gene058493 | MS.gene54577 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene54577 | 0.83427 | 3.30E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene54577 | -0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene54577 | 0.809941 | 1.47E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene54577 | 0.809845 | 1.55E-50 | -1.69E-46 |
| MS.gene059223 | MS.gene54577 | 0.822996 | 1.76E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene54577 | 0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene54577 | 0.813495 | 2.49E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene54577 | -0.804297 | 2.31E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene54577 | -0.815847 | 7.50E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene54577 | 0.822138 | 2.78E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene54577 | 0.807716 | 4.41E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene54577 | 0.824474 | 7.92E-54 | -1.69E-46 |
| MS.gene060087 | MS.gene54577 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene54577 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene54577 | -0.832085 | 1.16E-55 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54577.t1 | MTR_4g066580 | 95.292 | 531 | 15 | 1 | 1 | 521 | 1 | 531 | 0.0 | 1045 |
| MS.gene54577.t1 | MTR_3g028720 | 87.006 | 531 | 58 | 2 | 1 | 521 | 1 | 530 | 0.0 | 974 |
| MS.gene54577.t1 | MTR_3g028720 | 86.957 | 460 | 49 | 2 | 1 | 450 | 1 | 459 | 0.0 | 842 |
| MS.gene54577.t1 | MTR_4g066580 | 94.159 | 428 | 15 | 1 | 1 | 418 | 1 | 428 | 0.0 | 831 |
| MS.gene54577.t1 | MTR_4g066590 | 72.885 | 520 | 124 | 3 | 3 | 512 | 4 | 516 | 0.0 | 806 |
| MS.gene54577.t1 | MTR_4g066630 | 74.749 | 499 | 115 | 2 | 21 | 509 | 22 | 519 | 0.0 | 800 |
| MS.gene54577.t1 | MTR_3g028720 | 87.089 | 426 | 44 | 2 | 1 | 416 | 1 | 425 | 0.0 | 779 |
| MS.gene54577.t1 | MTR_2g098540 | 68.738 | 515 | 143 | 2 | 1 | 505 | 1 | 507 | 0.0 | 746 |
| MS.gene54577.t1 | MTR_2g098520 | 69.307 | 505 | 145 | 1 | 11 | 505 | 6 | 510 | 0.0 | 745 |
| MS.gene54577.t1 | MTR_2g098790 | 67.568 | 518 | 151 | 4 | 1 | 505 | 1 | 514 | 0.0 | 742 |
| MS.gene54577.t1 | MTR_6g078450 | 66.344 | 517 | 161 | 3 | 1 | 507 | 1 | 514 | 0.0 | 720 |
| MS.gene54577.t1 | MTR_4g066210 | 64.423 | 520 | 172 | 2 | 2 | 508 | 3 | 522 | 0.0 | 715 |
| MS.gene54577.t1 | MTR_3g028720 | 86.410 | 390 | 42 | 2 | 1 | 380 | 1 | 389 | 0.0 | 713 |
| MS.gene54577.t1 | MTR_4g066240 | 65.483 | 507 | 165 | 1 | 9 | 505 | 6 | 512 | 0.0 | 711 |
| MS.gene54577.t1 | MTR_4g066640 | 66.337 | 505 | 156 | 3 | 12 | 505 | 12 | 513 | 0.0 | 709 |
| MS.gene54577.t1 | MTR_6g078330 | 65.703 | 519 | 160 | 4 | 1 | 506 | 1 | 514 | 0.0 | 707 |
| MS.gene54577.t1 | MTR_4g066240 | 65.354 | 508 | 165 | 2 | 9 | 505 | 6 | 513 | 0.0 | 706 |
| MS.gene54577.t1 | MTR_4g066630 | 74.943 | 439 | 99 | 2 | 21 | 449 | 22 | 459 | 0.0 | 704 |
| MS.gene54577.t1 | MTR_2g098540 | 70.961 | 458 | 123 | 1 | 58 | 505 | 6 | 463 | 0.0 | 697 |
| MS.gene54577.t1 | MTR_6g078380 | 65.234 | 512 | 165 | 3 | 6 | 506 | 5 | 514 | 0.0 | 683 |
| MS.gene54577.t1 | MTR_5g071520 | 64.190 | 525 | 167 | 4 | 1 | 505 | 1 | 524 | 0.0 | 682 |
| MS.gene54577.t1 | MTR_4g066330 | 61.228 | 521 | 160 | 5 | 1 | 506 | 1 | 494 | 0.0 | 644 |
| MS.gene54577.t1 | MTR_4g066630 | 74.010 | 404 | 94 | 2 | 21 | 414 | 22 | 424 | 0.0 | 643 |
| MS.gene54577.t1 | MTR_6g078450 | 66.957 | 460 | 139 | 3 | 1 | 450 | 1 | 457 | 0.0 | 638 |
| MS.gene54577.t1 | MTR_4g066340 | 68.664 | 434 | 126 | 1 | 82 | 505 | 6 | 439 | 0.0 | 633 |
| MS.gene54577.t1 | MTR_4g067040 | 72.506 | 411 | 95 | 3 | 3 | 402 | 4 | 407 | 0.0 | 627 |
| MS.gene54577.t1 | MTR_3g026280 | 61.378 | 479 | 170 | 3 | 37 | 505 | 20 | 493 | 0.0 | 619 |
| MS.gene54577.t1 | MTR_4g066280 | 60.700 | 486 | 153 | 3 | 33 | 506 | 35 | 494 | 0.0 | 615 |
| MS.gene54577.t1 | MTR_6g078330 | 69.024 | 410 | 117 | 1 | 107 | 506 | 1 | 410 | 0.0 | 602 |
| MS.gene54577.t1 | MTR_4g067040 | 71.939 | 392 | 92 | 3 | 3 | 383 | 4 | 388 | 0.0 | 595 |
| MS.gene54577.t1 | MTR_4g023000 | 58.873 | 479 | 181 | 4 | 37 | 505 | 22 | 494 | 0.0 | 590 |
| MS.gene54577.t1 | MTR_4g066240 | 64.423 | 416 | 138 | 1 | 9 | 414 | 6 | 421 | 0.0 | 574 |
| MS.gene54577.t1 | MTR_6g078330 | 67.085 | 398 | 119 | 2 | 119 | 506 | 15 | 410 | 0.0 | 565 |
| MS.gene54577.t1 | MTR_4g066630 | 73.596 | 356 | 83 | 2 | 21 | 366 | 22 | 376 | 0.0 | 564 |
| MS.gene54577.t1 | MTR_4g015420 | 56.795 | 493 | 163 | 8 | 35 | 505 | 61 | 525 | 0.0 | 558 |
| MS.gene54577.t1 | MTR_3g026620 | 52.734 | 512 | 225 | 5 | 4 | 505 | 6 | 510 | 0.0 | 547 |
| MS.gene54577.t1 | MTR_4g015460 | 55.186 | 511 | 178 | 10 | 16 | 504 | 19 | 500 | 0.0 | 541 |
| MS.gene54577.t1 | MTR_3g026400 | 53.033 | 511 | 220 | 7 | 6 | 505 | 8 | 509 | 0.0 | 538 |
| MS.gene54577.t1 | MTR_2g043200 | 56.904 | 478 | 162 | 7 | 44 | 505 | 70 | 519 | 0.0 | 536 |
| MS.gene54577.t1 | MTR_4g066640 | 63.520 | 392 | 129 | 3 | 1 | 381 | 1 | 389 | 0.0 | 519 |
| MS.gene54577.t1 | MTR_6g078330 | 65.426 | 376 | 116 | 3 | 1 | 365 | 1 | 373 | 1.14e-179 | 510 |
| MS.gene54577.t1 | MTR_4g083000 | 50.916 | 491 | 221 | 7 | 28 | 504 | 18 | 502 | 7.07e-178 | 510 |
| MS.gene54577.t1 | MTR_3g026400 | 54.230 | 461 | 195 | 5 | 56 | 505 | 23 | 478 | 7.64e-177 | 506 |
| MS.gene54577.t1 | MTR_5g044000 | 48.456 | 518 | 226 | 7 | 24 | 503 | 6 | 520 | 1.89e-171 | 494 |
| MS.gene54577.t1 | MTR_4g081530 | 50.104 | 483 | 225 | 5 | 38 | 507 | 23 | 502 | 1.43e-166 | 482 |
| MS.gene54577.t1 | MTR_0110s0040 | 47.070 | 512 | 250 | 7 | 5 | 506 | 13 | 513 | 1.78e-162 | 471 |
| MS.gene54577.t1 | MTR_0110s0030 | 45.703 | 512 | 257 | 7 | 5 | 506 | 13 | 513 | 1.15e-158 | 461 |
| MS.gene54577.t1 | MTR_3g033810 | 46.875 | 480 | 230 | 6 | 36 | 504 | 18 | 483 | 2.11e-152 | 445 |
| MS.gene54577.t1 | MTR_3g033790 | 46.901 | 484 | 223 | 8 | 39 | 507 | 19 | 483 | 2.73e-152 | 444 |
| MS.gene54577.t1 | MTR_2g079550 | 45.866 | 508 | 247 | 8 | 10 | 503 | 8 | 501 | 5.23e-150 | 440 |
| MS.gene54577.t1 | MTR_2g079580 | 44.882 | 508 | 252 | 8 | 10 | 503 | 10 | 503 | 5.34e-149 | 437 |
| MS.gene54577.t1 | MTR_4g131810 | 45.510 | 490 | 248 | 7 | 44 | 517 | 33 | 519 | 3.03e-148 | 435 |
| MS.gene54577.t1 | MTR_2g022760 | 46.778 | 481 | 239 | 6 | 48 | 515 | 45 | 521 | 1.36e-147 | 433 |
| MS.gene54577.t1 | MTR_4g083000 | 50.971 | 412 | 184 | 5 | 107 | 504 | 1 | 408 | 1.31e-144 | 422 |
| MS.gene54577.t1 | MTR_7g068910 | 45.436 | 482 | 235 | 8 | 38 | 506 | 30 | 496 | 1.02e-142 | 421 |
| MS.gene54577.t1 | MTR_2g022710 | 42.775 | 519 | 268 | 8 | 5 | 509 | 10 | 513 | 5.39e-141 | 417 |
| MS.gene54577.t1 | MTR_4g131800 | 46.526 | 475 | 238 | 6 | 44 | 506 | 521 | 991 | 1.65e-139 | 428 |
| MS.gene54577.t1 | MTR_7g068910 | 44.512 | 492 | 235 | 9 | 38 | 506 | 30 | 506 | 2.51e-139 | 412 |
| MS.gene54577.t1 | MTR_5g068740 | 44.603 | 491 | 231 | 11 | 33 | 504 | 21 | 489 | 5.81e-138 | 409 |
| MS.gene54577.t1 | MTR_4g016920 | 43.902 | 492 | 248 | 8 | 38 | 516 | 26 | 502 | 9.53e-138 | 408 |
| MS.gene54577.t1 | MTR_3g026400 | 56.125 | 351 | 137 | 5 | 6 | 346 | 8 | 351 | 5.03e-135 | 396 |
| MS.gene54577.t1 | MTR_7g033860 | 44.583 | 480 | 231 | 8 | 41 | 503 | 50 | 511 | 2.17e-133 | 397 |
| MS.gene54577.t1 | MTR_1g088610 | 45.194 | 489 | 230 | 12 | 33 | 504 | 21 | 488 | 4.61e-133 | 400 |
| MS.gene54577.t1 | MTR_1g088610 | 40.171 | 117 | 63 | 3 | 389 | 504 | 503 | 613 | 5.19e-14 | 75.1 |
| MS.gene54577.t1 | MTR_0108s0030 | 43.129 | 473 | 230 | 4 | 41 | 503 | 5 | 448 | 6.54e-130 | 386 |
| MS.gene54577.t1 | MTR_2g079580 | 44.869 | 419 | 204 | 7 | 10 | 414 | 10 | 415 | 3.38e-121 | 362 |
| MS.gene54577.t1 | MTR_2g022760 | 45.735 | 422 | 212 | 6 | 107 | 515 | 1 | 418 | 2.73e-120 | 360 |
| MS.gene54577.t1 | MTR_7g051510 | 42.650 | 483 | 241 | 9 | 40 | 508 | 76 | 536 | 1.78e-118 | 359 |
| MS.gene54577.t1 | MTR_7g051610 | 43.515 | 478 | 240 | 7 | 40 | 506 | 76 | 534 | 2.54e-118 | 359 |
| MS.gene54577.t1 | MTR_0110s0040 | 48.370 | 368 | 172 | 5 | 5 | 362 | 13 | 372 | 1.08e-117 | 353 |
| MS.gene54577.t1 | MTR_2g022710 | 41.739 | 460 | 240 | 7 | 5 | 450 | 10 | 455 | 2.51e-116 | 352 |
| MS.gene54577.t1 | MTR_2g022710 | 41.739 | 460 | 240 | 7 | 5 | 450 | 10 | 455 | 3.47e-116 | 352 |
| MS.gene54577.t1 | MTR_7g051650 | 42.469 | 478 | 240 | 8 | 40 | 503 | 76 | 532 | 1.48e-115 | 352 |
| MS.gene54577.t1 | MTR_7g051650 | 42.050 | 478 | 238 | 8 | 40 | 503 | 76 | 528 | 3.58e-114 | 348 |
| MS.gene54577.t1 | MTR_2g022710 | 43.373 | 415 | 220 | 5 | 107 | 509 | 1 | 412 | 8.05e-114 | 343 |
| MS.gene54577.t1 | MTR_1g088630 | 43.562 | 466 | 197 | 14 | 58 | 504 | 14 | 432 | 3.10e-113 | 343 |
| MS.gene54577.t1 | MTR_7g068900 | 43.943 | 421 | 200 | 8 | 102 | 504 | 17 | 419 | 3.85e-112 | 342 |
| MS.gene54577.t1 | MTR_2g022710 | 42.689 | 424 | 215 | 7 | 5 | 414 | 10 | 419 | 4.73e-112 | 339 |
| MS.gene54577.t1 | MTR_4g016920 | 42.317 | 423 | 217 | 7 | 107 | 516 | 1 | 409 | 1.91e-109 | 332 |
| MS.gene54577.t1 | MTR_2g022710 | 41.990 | 412 | 211 | 7 | 5 | 402 | 10 | 407 | 9.13e-106 | 322 |
| MS.gene54577.t1 | MTR_1g088630 | 49.379 | 322 | 117 | 7 | 41 | 348 | 29 | 318 | 3.38e-100 | 306 |
| MS.gene54577.t1 | MTR_2g022710 | 42.636 | 387 | 194 | 7 | 5 | 377 | 10 | 382 | 8.37e-98 | 302 |
| MS.gene54577.t1 | MTR_7g056747 | 40.909 | 418 | 211 | 5 | 101 | 507 | 9 | 401 | 1.19e-96 | 299 |
| MS.gene54577.t1 | MTR_1g088630 | 52.788 | 269 | 105 | 5 | 41 | 295 | 29 | 289 | 4.30e-91 | 281 |
| MS.gene54577.t1 | MTR_4g016920 | 49.259 | 270 | 124 | 3 | 107 | 365 | 1 | 268 | 3.46e-86 | 268 |
| MS.gene54577.t1 | MTR_0110s0020 | 48.638 | 257 | 124 | 4 | 5 | 261 | 13 | 261 | 1.47e-82 | 259 |
| MS.gene54577.t1 | MTR_5g069350 | 45.665 | 173 | 53 | 6 | 343 | 505 | 48 | 189 | 2.51e-31 | 120 |
| MS.gene54577.t1 | MTR_4g122980 | 27.612 | 402 | 222 | 12 | 103 | 495 | 183 | 524 | 1.27e-30 | 126 |
| MS.gene54577.t1 | MTR_8g038650 | 40.708 | 113 | 59 | 2 | 238 | 350 | 48 | 152 | 7.69e-22 | 92.8 |
| MS.gene54577.t1 | MTR_8g038650 | 47.143 | 70 | 36 | 1 | 48 | 117 | 7 | 75 | 5.79e-13 | 67.4 |
| MS.gene54577.t1 | MTR_4g061170 | 66.667 | 42 | 12 | 1 | 451 | 490 | 23 | 64 | 2.41e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54577.t1 | AT2G44480 | 56.757 | 481 | 197 | 2 | 37 | 507 | 33 | 512 | 0.0 | 578 |
| MS.gene54577.t1 | AT2G44480 | 56.757 | 481 | 197 | 2 | 37 | 507 | 64 | 543 | 0.0 | 578 |
| MS.gene54577.t1 | AT5G44640 | 52.055 | 511 | 222 | 5 | 9 | 508 | 8 | 506 | 0.0 | 555 |
| MS.gene54577.t1 | AT5G42260 | 53.571 | 504 | 211 | 5 | 7 | 499 | 6 | 497 | 0.0 | 553 |
| MS.gene54577.t1 | AT2G44450 | 54.812 | 478 | 201 | 3 | 39 | 506 | 31 | 503 | 0.0 | 550 |
| MS.gene54577.t1 | AT3G60130 | 54.507 | 477 | 201 | 4 | 39 | 504 | 30 | 501 | 0.0 | 538 |
| MS.gene54577.t1 | AT3G60140 | 50.098 | 511 | 229 | 6 | 8 | 505 | 7 | 504 | 0.0 | 531 |
| MS.gene54577.t1 | AT5G24550 | 52.846 | 492 | 209 | 7 | 39 | 512 | 32 | 518 | 0.0 | 530 |
| MS.gene54577.t1 | AT2G25630 | 52.807 | 481 | 192 | 6 | 39 | 506 | 30 | 488 | 5.13e-180 | 515 |
| MS.gene54577.t1 | AT5G24540 | 52.675 | 486 | 215 | 6 | 39 | 510 | 32 | 516 | 2.21e-179 | 515 |
| MS.gene54577.t1 | AT1G51470 | 52.292 | 480 | 205 | 8 | 38 | 505 | 44 | 511 | 6.05e-177 | 508 |
| MS.gene54577.t1 | AT2G44470 | 49.792 | 480 | 227 | 5 | 39 | 505 | 29 | 507 | 2.56e-175 | 507 |
| MS.gene54577.t1 | AT3G60120 | 51.250 | 480 | 221 | 5 | 38 | 505 | 13 | 491 | 4.05e-175 | 504 |
| MS.gene54577.t1 | AT1G47600 | 51.875 | 480 | 207 | 8 | 38 | 505 | 44 | 511 | 6.33e-175 | 503 |
| MS.gene54577.t1 | AT1G47600 | 51.875 | 480 | 206 | 8 | 38 | 505 | 44 | 510 | 2.39e-174 | 501 |
| MS.gene54577.t1 | AT2G44490 | 50.936 | 481 | 222 | 5 | 38 | 504 | 13 | 493 | 8.29e-174 | 502 |
| MS.gene54577.t1 | AT2G44460 | 48.692 | 497 | 242 | 5 | 35 | 519 | 25 | 520 | 2.35e-173 | 501 |
| MS.gene54577.t1 | AT1G26560 | 48.871 | 487 | 229 | 6 | 36 | 507 | 29 | 510 | 2.68e-169 | 488 |
| MS.gene54577.t1 | AT2G44480 | 54.988 | 411 | 174 | 2 | 107 | 507 | 1 | 410 | 4.33e-169 | 484 |
| MS.gene54577.t1 | AT5G54570 | 50.520 | 481 | 219 | 5 | 38 | 503 | 29 | 505 | 1.24e-168 | 488 |
| MS.gene54577.t1 | AT3G18080 | 49.177 | 486 | 229 | 7 | 34 | 508 | 34 | 512 | 2.15e-162 | 471 |
| MS.gene54577.t1 | AT5G25980 | 45.283 | 530 | 271 | 9 | 3 | 519 | 15 | 538 | 1.17e-159 | 465 |
| MS.gene54577.t1 | AT2G32860 | 46.598 | 485 | 245 | 5 | 38 | 509 | 93 | 576 | 4.38e-157 | 461 |
| MS.gene54577.t1 | AT3G09260 | 46.421 | 489 | 247 | 6 | 39 | 514 | 35 | 521 | 1.16e-156 | 457 |
| MS.gene54577.t1 | AT3G60130 | 53.253 | 415 | 178 | 4 | 101 | 504 | 40 | 449 | 1.59e-156 | 454 |
| MS.gene54577.t1 | AT3G03640 | 43.786 | 523 | 267 | 6 | 1 | 505 | 1 | 514 | 2.49e-155 | 454 |
| MS.gene54577.t1 | AT3G18070 | 46.091 | 486 | 236 | 8 | 34 | 508 | 25 | 495 | 4.05e-155 | 452 |
| MS.gene54577.t1 | AT2G32860 | 45.773 | 485 | 250 | 4 | 38 | 509 | 93 | 577 | 6.91e-155 | 456 |
| MS.gene54577.t1 | AT3G18070 | 46.091 | 486 | 242 | 8 | 34 | 508 | 25 | 501 | 5.17e-154 | 449 |
| MS.gene54577.t1 | AT5G36890 | 48.542 | 480 | 224 | 5 | 40 | 508 | 17 | 484 | 8.75e-154 | 448 |
| MS.gene54577.t1 | AT5G36890 | 48.542 | 480 | 224 | 5 | 40 | 508 | 17 | 484 | 1.15e-153 | 448 |
| MS.gene54577.t1 | AT1G75940 | 46.626 | 489 | 239 | 8 | 39 | 508 | 37 | 522 | 4.93e-153 | 448 |
| MS.gene54577.t1 | AT3G21370 | 46.201 | 487 | 236 | 9 | 38 | 504 | 32 | 512 | 1.10e-151 | 444 |
| MS.gene54577.t1 | AT5G28510 | 46.791 | 483 | 237 | 7 | 39 | 503 | 39 | 519 | 2.27e-150 | 441 |
| MS.gene54577.t1 | AT1G66280 | 46.289 | 512 | 249 | 9 | 6 | 503 | 11 | 510 | 1.57e-149 | 439 |
| MS.gene54577.t1 | AT3G60130 | 52.289 | 415 | 171 | 5 | 101 | 504 | 40 | 438 | 1.69e-149 | 436 |
| MS.gene54577.t1 | AT5G24540 | 51.651 | 424 | 191 | 5 | 39 | 449 | 32 | 454 | 2.20e-149 | 436 |
| MS.gene54577.t1 | AT2G44470 | 47.991 | 423 | 207 | 4 | 39 | 449 | 29 | 450 | 1.49e-148 | 433 |
| MS.gene54577.t1 | AT1G66270 | 45.149 | 505 | 263 | 7 | 22 | 514 | 19 | 521 | 2.34e-148 | 436 |
| MS.gene54577.t1 | AT1G52400 | 45.549 | 483 | 245 | 8 | 39 | 506 | 39 | 518 | 4.64e-148 | 435 |
| MS.gene54577.t1 | AT1G52400 | 45.549 | 483 | 245 | 8 | 39 | 506 | 39 | 518 | 4.64e-148 | 435 |
| MS.gene54577.t1 | AT3G60140 | 48.210 | 419 | 192 | 5 | 8 | 414 | 7 | 412 | 1.17e-145 | 426 |
| MS.gene54577.t1 | AT5G54570 | 49.649 | 427 | 197 | 4 | 38 | 450 | 29 | 451 | 4.88e-145 | 424 |
| MS.gene54577.t1 | AT1G66270 | 44.752 | 505 | 263 | 8 | 22 | 514 | 19 | 519 | 1.15e-144 | 426 |
| MS.gene54577.t1 | AT5G26000 | 44.828 | 522 | 250 | 12 | 7 | 503 | 3 | 511 | 4.22e-144 | 425 |
| MS.gene54577.t1 | AT1G02850 | 46.122 | 477 | 228 | 8 | 40 | 504 | 27 | 486 | 4.90e-142 | 419 |
| MS.gene54577.t1 | AT5G54570 | 50.243 | 412 | 186 | 5 | 107 | 503 | 1 | 408 | 5.95e-139 | 408 |
| MS.gene54577.t1 | AT1G02850 | 44.200 | 500 | 227 | 8 | 40 | 504 | 27 | 509 | 1.25e-138 | 410 |
| MS.gene54577.t1 | AT1G02850 | 44.511 | 501 | 225 | 9 | 40 | 504 | 27 | 510 | 1.35e-137 | 408 |
| MS.gene54577.t1 | AT4G27830 | 44.513 | 483 | 237 | 8 | 35 | 503 | 19 | 484 | 2.32e-137 | 407 |
| MS.gene54577.t1 | AT5G25980 | 44.880 | 459 | 236 | 7 | 3 | 450 | 15 | 467 | 1.30e-136 | 404 |
| MS.gene54577.t1 | AT5G25980 | 44.880 | 459 | 236 | 7 | 3 | 450 | 15 | 467 | 1.30e-136 | 404 |
| MS.gene54577.t1 | AT1G61820 | 43.265 | 490 | 262 | 7 | 33 | 509 | 24 | 510 | 1.79e-136 | 405 |
| MS.gene54577.t1 | AT2G44480 | 62.252 | 302 | 103 | 2 | 37 | 328 | 64 | 364 | 1.74e-135 | 398 |
| MS.gene54577.t1 | AT1G60090 | 42.300 | 513 | 251 | 10 | 12 | 510 | 8 | 489 | 6.77e-135 | 400 |
| MS.gene54577.t1 | AT4G27820 | 44.792 | 480 | 232 | 8 | 38 | 503 | 22 | 482 | 9.79e-135 | 400 |
| MS.gene54577.t1 | AT1G02850 | 45.824 | 467 | 217 | 9 | 40 | 504 | 27 | 459 | 3.80e-134 | 397 |
| MS.gene54577.t1 | AT4G21760 | 41.199 | 517 | 279 | 9 | 5 | 509 | 24 | 527 | 7.35e-134 | 399 |
| MS.gene54577.t1 | AT1G60090 | 40.883 | 521 | 254 | 11 | 12 | 510 | 8 | 496 | 7.45e-131 | 390 |
| MS.gene54577.t1 | AT2G44450 | 51.541 | 357 | 158 | 3 | 160 | 506 | 1 | 352 | 1.44e-129 | 381 |
| MS.gene54577.t1 | AT3G62750 | 42.531 | 482 | 235 | 9 | 36 | 503 | 20 | 473 | 7.60e-129 | 385 |
| MS.gene54577.t1 | AT3G62750 | 42.531 | 482 | 235 | 9 | 36 | 503 | 46 | 499 | 1.71e-128 | 385 |
| MS.gene54577.t1 | AT1G61810 | 42.149 | 484 | 260 | 7 | 39 | 507 | 33 | 511 | 7.10e-128 | 383 |
| MS.gene54577.t1 | AT4G21760 | 40.971 | 515 | 273 | 11 | 5 | 509 | 24 | 517 | 8.99e-128 | 383 |
| MS.gene54577.t1 | AT4G22100 | 42.062 | 485 | 249 | 9 | 40 | 510 | 23 | 489 | 3.54e-127 | 381 |
| MS.gene54577.t1 | AT2G44470 | 49.851 | 335 | 156 | 3 | 39 | 362 | 29 | 362 | 1.30e-125 | 373 |
| MS.gene54577.t1 | AT5G26000 | 44.325 | 467 | 224 | 10 | 7 | 450 | 3 | 456 | 1.32e-125 | 375 |
| MS.gene54577.t1 | AT1G52400 | 44.706 | 425 | 218 | 7 | 39 | 449 | 39 | 460 | 9.01e-123 | 368 |
| MS.gene54577.t1 | AT1G61810 | 42.398 | 467 | 249 | 7 | 39 | 490 | 33 | 494 | 1.33e-122 | 370 |
| MS.gene54577.t1 | AT1G45191 | 41.400 | 500 | 245 | 11 | 40 | 521 | 30 | 499 | 2.79e-122 | 368 |
| MS.gene54577.t1 | AT1G45191 | 40.619 | 485 | 256 | 10 | 40 | 510 | 30 | 496 | 7.57e-120 | 362 |
| MS.gene54577.t1 | AT1G45191 | 40.974 | 493 | 248 | 11 | 40 | 510 | 30 | 501 | 2.49e-119 | 361 |
| MS.gene54577.t1 | AT1G45191 | 40.557 | 503 | 248 | 12 | 40 | 510 | 30 | 513 | 2.79e-117 | 356 |
| MS.gene54577.t1 | AT1G02850 | 44.988 | 409 | 180 | 6 | 40 | 414 | 27 | 424 | 6.38e-117 | 352 |
| MS.gene54577.t1 | AT3G62740 | 39.715 | 491 | 257 | 11 | 28 | 503 | 12 | 478 | 3.10e-116 | 352 |
| MS.gene54577.t1 | AT2G44460 | 47.594 | 374 | 184 | 4 | 158 | 519 | 1 | 374 | 1.22e-115 | 348 |
| MS.gene54577.t1 | AT3G62750 | 41.860 | 430 | 209 | 8 | 36 | 452 | 46 | 447 | 6.06e-111 | 337 |
| MS.gene54577.t1 | AT5G48375 | 40.685 | 467 | 197 | 10 | 17 | 471 | 17 | 415 | 6.39e-109 | 332 |
| MS.gene54577.t1 | AT4G27830 | 42.822 | 411 | 206 | 7 | 107 | 503 | 1 | 396 | 1.28e-106 | 325 |
| MS.gene54577.t1 | AT1G51490 | 48.997 | 349 | 151 | 8 | 46 | 381 | 27 | 361 | 6.92e-106 | 323 |
| MS.gene54577.t1 | AT2G44480 | 49.669 | 302 | 141 | 2 | 216 | 507 | 6 | 306 | 7.85e-105 | 317 |
| MS.gene54577.t1 | AT4G27820 | 42.579 | 411 | 208 | 7 | 107 | 503 | 1 | 397 | 1.15e-103 | 317 |
| MS.gene54577.t1 | AT4G27820 | 42.579 | 411 | 208 | 7 | 107 | 503 | 1 | 397 | 1.15e-103 | 317 |
| MS.gene54577.t1 | AT1G61810 | 42.067 | 416 | 221 | 7 | 107 | 507 | 1 | 411 | 1.20e-103 | 317 |
| MS.gene54577.t1 | AT3G18070 | 46.246 | 333 | 163 | 5 | 34 | 356 | 25 | 351 | 1.73e-103 | 316 |
| MS.gene54577.t1 | AT1G60270 | 45.376 | 346 | 170 | 5 | 39 | 372 | 24 | 362 | 1.42e-102 | 313 |
| MS.gene54577.t1 | AT3G62750 | 46.462 | 325 | 148 | 5 | 36 | 350 | 20 | 328 | 2.00e-102 | 312 |
| MS.gene54577.t1 | AT3G62750 | 46.462 | 325 | 148 | 5 | 36 | 350 | 20 | 328 | 2.00e-102 | 312 |
| MS.gene54577.t1 | AT3G62740 | 39.679 | 436 | 225 | 10 | 28 | 449 | 12 | 423 | 1.97e-101 | 312 |
| MS.gene54577.t1 | AT3G62750 | 46.154 | 325 | 149 | 4 | 36 | 350 | 46 | 354 | 2.20e-101 | 312 |
| MS.gene54577.t1 | AT1G45191 | 46.395 | 319 | 153 | 4 | 40 | 348 | 30 | 340 | 9.68e-100 | 307 |
| MS.gene54577.t1 | AT1G45191 | 46.395 | 319 | 153 | 4 | 40 | 348 | 30 | 340 | 1.13e-99 | 307 |
| MS.gene54577.t1 | AT1G61810 | 41.176 | 391 | 211 | 6 | 39 | 414 | 33 | 419 | 2.75e-99 | 306 |
| MS.gene54577.t1 | AT3G18070 | 45.152 | 330 | 166 | 5 | 190 | 508 | 99 | 424 | 1.49e-96 | 299 |
| MS.gene54577.t1 | AT3G18070 | 47.059 | 68 | 35 | 1 | 34 | 101 | 25 | 91 | 6.99e-14 | 73.9 |
| MS.gene54577.t1 | AT3G62750 | 39.416 | 411 | 212 | 8 | 107 | 503 | 1 | 388 | 6.00e-95 | 295 |
| MS.gene54577.t1 | AT3G62750 | 39.416 | 411 | 212 | 8 | 107 | 503 | 1 | 388 | 6.00e-95 | 295 |
| MS.gene54577.t1 | AT1G61820 | 41.351 | 370 | 202 | 6 | 153 | 509 | 4 | 371 | 9.26e-92 | 285 |
| MS.gene54577.t1 | AT3G18070 | 44.620 | 316 | 160 | 5 | 204 | 508 | 1 | 312 | 7.71e-91 | 281 |
| MS.gene54577.t1 | AT1G61810 | 45.185 | 270 | 136 | 3 | 39 | 298 | 33 | 300 | 1.38e-78 | 249 |
| MS.gene54577.t1 | AT1G60270 | 44.245 | 278 | 140 | 4 | 107 | 372 | 1 | 275 | 2.42e-74 | 237 |
| MS.gene54577.t1 | AT3G18070 | 44.304 | 237 | 120 | 3 | 191 | 416 | 100 | 335 | 3.54e-63 | 210 |
| MS.gene54577.t1 | AT3G18070 | 47.059 | 68 | 35 | 1 | 34 | 101 | 25 | 91 | 4.12e-14 | 74.3 |
| MS.gene54577.t1 | AT3G18070 | 43.498 | 223 | 114 | 3 | 204 | 415 | 1 | 222 | 9.27e-58 | 192 |
| MS.gene54577.t1 | AT5G16580 | 35.430 | 302 | 152 | 8 | 179 | 460 | 21 | 299 | 5.48e-45 | 160 |
| MS.gene54577.t1 | AT3G06510 | 27.907 | 430 | 239 | 16 | 102 | 504 | 159 | 544 | 1.38e-29 | 123 |
| MS.gene54577.t1 | AT3G06510 | 27.073 | 410 | 234 | 12 | 102 | 504 | 159 | 510 | 3.69e-29 | 122 |
Find 105 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATTTATTTCAGGTTTA+TGG | 0.091209 | 4.3:+37433437 | MS.gene54577:intron |
| GTTTGCTTTGTATTGAATTT+TGG | 0.170509 | 4.3:-37433519 | None:intergenic |
| GAACTTTGTTTCAAGGAATT+TGG | 0.174740 | 4.3:+37433005 | MS.gene54577:CDS |
| TTCCCTCAAGGCTTTATCTT+TGG | 0.178608 | 4.3:+37431904 | MS.gene54577:CDS |
| TCCCTCAAGGCTTTATCTTT+GGG | 0.200749 | 4.3:+37431905 | MS.gene54577:CDS |
| TCTATTTACATCACAGAAAA+TGG | 0.202373 | 4.3:+37433885 | MS.gene54577:CDS |
| GCCCATTTGCATAGCCATTT+TGG | 0.215929 | 4.3:-37433076 | None:intergenic |
| GAATCACCTCCGGTACAATT+TGG | 0.240733 | 4.3:-37433134 | None:intergenic |
| AAATCTCAAAAGGGCGTAAT+AGG | 0.261458 | 4.3:+37433239 | MS.gene54577:CDS |
| TAGTTACTTAACAGATTCTT+TGG | 0.293237 | 4.3:+37433635 | MS.gene54577:CDS |
| ACCACAAAGCAGACAACTTC+TGG | 0.332456 | 4.3:-37434349 | None:intergenic |
| TCCGGTTATAGCGTCAGATT+TGG | 0.349931 | 4.3:+37434287 | MS.gene54577:CDS |
| TTCTGCGATCGAGCCCTATT+TGG | 0.357111 | 4.3:+37433154 | MS.gene54577:CDS |
| CCATGGAGCTACAGCCAAAA+TGG | 0.357660 | 4.3:+37433062 | MS.gene54577:CDS |
| GAATTGCAGTTGAGCGCAAC+GGG | 0.358303 | 4.3:+37433763 | MS.gene54577:intron |
| GTGGTAGAACACCAAGTATA+TGG | 0.359362 | 4.3:+37432096 | MS.gene54577:CDS |
| ACCTTTGTTGATTATAAGAA+TGG | 0.360730 | 4.3:+37434314 | MS.gene54577:CDS |
| TTGGTAATGCGTAACCAAAT+AGG | 0.369016 | 4.3:-37433168 | None:intergenic |
| TTTATCTTCGATCTGCCATT+AGG | 0.377497 | 4.3:+37434106 | MS.gene54577:CDS |
| CACCGGGTCGTTGCTCTAGT+TGG | 0.384109 | 4.3:+37433105 | MS.gene54577:CDS |
| CAATATTCTAGACCAGGATA+TGG | 0.394308 | 4.3:-37432482 | None:intergenic |
| TGCAAATGGGCGAATGGCAC+CGG | 0.395385 | 4.3:+37433088 | MS.gene54577:CDS |
| TTGGATACTCACACTATAAG+AGG | 0.395389 | 4.3:-37432876 | None:intergenic |
| AGCCAAAATGGCTATGCAAA+TGG | 0.396136 | 4.3:+37433074 | MS.gene54577:CDS |
| GAAGCAATCTTGATACCAAT+AGG | 0.412553 | 4.3:-37433789 | None:intergenic |
| GGATAATCTCCTGATGTTAG+TGG | 0.412747 | 4.3:-37433462 | None:intergenic |
| TGGTAATGCGTAACCAAATA+GGG | 0.414370 | 4.3:-37433167 | None:intergenic |
| CTATGCGGAACTTTGTTTCA+AGG | 0.415130 | 4.3:+37432998 | MS.gene54577:CDS |
| ACCAGAAGTTGTCTGCTTTG+TGG | 0.415274 | 4.3:+37434348 | MS.gene54577:CDS |
| TACTCTTCTTCTAAAGTTTG+AGG | 0.419592 | 4.3:-37432837 | None:intergenic |
| TTGACATTGCTTCATTGAAT+CGG | 0.421400 | 4.3:+37431875 | MS.gene54577:CDS |
| TGGTGATAGAGTCAAGTATT+GGG | 0.427511 | 4.3:+37433025 | MS.gene54577:CDS |
| CAAGGCTTTATCTTTGGGGC+TGG | 0.428623 | 4.3:+37431910 | MS.gene54577:CDS |
| AAAGTACAAGAAATCTCAAA+AGG | 0.432795 | 4.3:+37433229 | MS.gene54577:intron |
| TCCAAATCTGACGCTATAAC+CGG | 0.438855 | 4.3:-37434288 | None:intergenic |
| GCATAACCTTAGTAGCGAAT+TGG | 0.439687 | 4.3:+37433261 | MS.gene54577:CDS |
| GCTTATGTTTCTAATGAGAA+AGG | 0.441605 | 4.3:+37434400 | MS.gene54577:CDS |
| CCCCAAAGATAAAGCCTTGA+GGG | 0.442020 | 4.3:-37431906 | None:intergenic |
| TTGGTGATAGAGTCAAGTAT+TGG | 0.444972 | 4.3:+37433024 | MS.gene54577:CDS |
| CAAACTTTAGAAGAAGAGTA+TGG | 0.448230 | 4.3:+37432840 | MS.gene54577:CDS |
| ATCAGTTGAGGAATCACTCT+TGG | 0.455004 | 4.3:+37434047 | MS.gene54577:CDS |
| AATGAAGCAATGTCAAGAAT+AGG | 0.456359 | 4.3:-37431868 | None:intergenic |
| TGTTTGTATGATTAGTTTGA+AGG | 0.458490 | 4.3:+37432059 | MS.gene54577:intron |
| ACTCTTCTTCTAAAGTTTGA+GGG | 0.459763 | 4.3:-37432836 | None:intergenic |
| CCCTCAAGGCTTTATCTTTG+GGG | 0.461443 | 4.3:+37431906 | MS.gene54577:CDS |
| AAGCAAACTAAACTACTCAT+TGG | 0.461970 | 4.3:+37433534 | MS.gene54577:CDS |
| GCCAAAATGGCTATGCAAAT+GGG | 0.463040 | 4.3:+37433075 | MS.gene54577:CDS |
| CAAACAGATGGAAAGCTTAG+TGG | 0.481170 | 4.3:+37432619 | MS.gene54577:intron |
| ATCAACGAGCTACTAGCTAA+TGG | 0.482370 | 4.3:+37432682 | MS.gene54577:CDS |
| ATGTCAAGGGTTATTATGTA+TGG | 0.483435 | 4.3:+37434237 | MS.gene54577:CDS |
| AAAAGATCACGAATTCCTCT+TGG | 0.485304 | 4.3:-37433831 | None:intergenic |
| GGCTGGTTCATCTTCCTACC+AGG | 0.487180 | 4.3:+37431927 | MS.gene54577:CDS |
| GAGCGCAACGGGAAACCTAT+TGG | 0.489460 | 4.3:+37433774 | MS.gene54577:CDS |
| AAGATACCAATTCGCTACTA+AGG | 0.501344 | 4.3:-37433267 | None:intergenic |
| CAAAAGTAATAAAGAAGAGA+AGG | 0.503252 | 4.3:-37431789 | None:intergenic |
| ACCTTCACTCATAGATATCC+TGG | 0.506957 | 4.3:+37432122 | MS.gene54577:CDS |
| TGGATAAACGTACAACCATT+CGG | 0.510822 | 4.3:-37433811 | None:intergenic |
| CAATGGAAAAGAGTCACTAA+TGG | 0.516481 | 4.3:-37432807 | None:intergenic |
| CAGCGGCATGTGCAAGAAGT+TGG | 0.521028 | 4.3:-37433187 | None:intergenic |
| TTTATGGATCCACTAACATC+AGG | 0.523193 | 4.3:+37433453 | MS.gene54577:CDS |
| AAGATCAAGGATGGAAGCAA+TGG | 0.523398 | 4.3:+37432252 | MS.gene54577:CDS |
| GATAAAATAGATGACGGTAA+TGG | 0.527360 | 4.3:-37434089 | None:intergenic |
| TGGTAGAACACCAAGTATAT+GGG | 0.535693 | 4.3:+37432097 | MS.gene54577:CDS |
| AAAGAATCTGTTAAGTAACT+AGG | 0.540529 | 4.3:-37433633 | None:intergenic |
| TATTTAATTAATTACCTGGT+AGG | 0.543420 | 4.3:-37431941 | None:intergenic |
| GGGTTACTTTGAATGAGCCA+TGG | 0.549157 | 4.3:+37433045 | MS.gene54577:CDS |
| TGAGAGCCCTCGTTGGTGCT+AGG | 0.551450 | 4.3:+37433493 | MS.gene54577:CDS |
| TTGACATGCAGAAAAGATCA+AGG | 0.553913 | 4.3:+37432239 | MS.gene54577:intron |
| TGGTTGAATCCAAATTGTAC+CGG | 0.562770 | 4.3:+37433125 | MS.gene54577:CDS |
| CATGCAGAAAAGATCAAGGA+TGG | 0.572632 | 4.3:+37432243 | MS.gene54577:intron |
| AATCGGAATAGTTTCCCTCA+AGG | 0.572952 | 4.3:+37431892 | MS.gene54577:CDS |
| TTTGAAGGTGCAGCAACAGA+AGG | 0.574188 | 4.3:+37432074 | MS.gene54577:CDS |
| TGGATACTCACACTATAAGA+GGG | 0.574493 | 4.3:-37432875 | None:intergenic |
| GTATCAAGATTGCTTCCGAA+TGG | 0.575219 | 4.3:+37433796 | MS.gene54577:CDS |
| GCAAATGGGCGAATGGCACC+GGG | 0.577373 | 4.3:+37433089 | MS.gene54577:CDS |
| GTATTGATGATATGTGTCAA+TGG | 0.577465 | 4.3:-37432283 | None:intergenic |
| TGGCTATGCAAATGGGCGAA+TGG | 0.578351 | 4.3:+37433082 | MS.gene54577:CDS |
| CTCGATCGCAGAATCACCTC+CGG | 0.582972 | 4.3:-37433144 | None:intergenic |
| CAGGGAAGGTGTGAATGTCA+AGG | 0.585708 | 4.3:+37434223 | MS.gene54577:intron |
| CGATTCTACATTATCAGTTG+AGG | 0.589230 | 4.3:+37434035 | MS.gene54577:CDS |
| GGTTAACAATGGTGCATCAG+AGG | 0.590321 | 4.3:-37433601 | None:intergenic |
| AACCAACTAGAGCAACGACC+CGG | 0.592189 | 4.3:-37433107 | None:intergenic |
| ATCGAAGATAAAATAGATGA+CGG | 0.593478 | 4.3:-37434095 | None:intergenic |
| AAGTACAAGAAATCTCAAAA+GGG | 0.596464 | 4.3:+37433230 | MS.gene54577:intron |
| TCGGATTTGGAATTTGAGAG+TGG | 0.600864 | 4.3:-37433290 | None:intergenic |
| AGTGGTGGTGTCAATCAAGA+AGG | 0.603295 | 4.3:+37432637 | MS.gene54577:CDS |
| AGGGAAGGTGTGAATGTCAA+GGG | 0.604977 | 4.3:+37434224 | MS.gene54577:intron |
| TGAATTGCAGTTGAGCGCAA+CGG | 0.606152 | 4.3:+37433762 | MS.gene54577:intron |
| TAAGTAACTAGGTCTAGCAT+TGG | 0.612411 | 4.3:-37433622 | None:intergenic |
| GTGAAGGTGTCCCATATACT+TGG | 0.615393 | 4.3:-37432107 | None:intergenic |
| GCCATTCTTATAATCAACAA+AGG | 0.615945 | 4.3:-37434315 | None:intergenic |
| ACTTGGCAATATTCTAGACC+AGG | 0.618905 | 4.3:-37432488 | None:intergenic |
| ACCAGGATATCTATGAGTGA+AGG | 0.620179 | 4.3:-37432123 | None:intergenic |
| GAAGGTGCAGCAACAGAAGG+TGG | 0.627337 | 4.3:+37432077 | MS.gene54577:CDS |
| TTGAATCCAAATTGTACCGG+AGG | 0.632737 | 4.3:+37433128 | MS.gene54577:CDS |
| AAGTTTGAGGGAGATCCCAA+TGG | 0.634673 | 4.3:-37432824 | None:intergenic |
| TGGTTGTACGTTTATCCAAG+AGG | 0.645166 | 4.3:+37433816 | MS.gene54577:CDS |
| AAAAGCATGAGAGCCCTCGT+TGG | 0.645860 | 4.3:+37433486 | MS.gene54577:CDS |
| GGTCTAGCATTGGTTAACAA+TGG | 0.647381 | 4.3:-37433612 | None:intergenic |
| GCCCCAAAGATAAAGCCTTG+AGG | 0.657999 | 4.3:-37431907 | None:intergenic |
| ACAGATGGAAAGCTTAGTGG+TGG | 0.663853 | 4.3:+37432622 | MS.gene54577:intron |
| TGACACATATCATCAATACA+AGG | 0.667772 | 4.3:+37432287 | MS.gene54577:CDS |
| ACTTTAGAAGAAGAGTATGG+TGG | 0.678058 | 4.3:+37432843 | MS.gene54577:CDS |
| TGGTAACCTAGCACCAACGA+GGG | 0.696965 | 4.3:-37433499 | None:intergenic |
| TTGGTAACCTAGCACCAACG+AGG | 0.706174 | 4.3:-37433500 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTATGATTATATATAA+AGG | - | chr4.3:37433923-37433942 | None:intergenic | 10.0% |
| !! | AATTCAAATTTATTTATTTC+AGG | + | chr4.3:37433430-37433449 | MS.gene54577:intron | 10.0% |
| !! | AATTGATTATCAAATATTAT+AGG | + | chr4.3:37432777-37432796 | MS.gene54577:intron | 10.0% |
| !! | AATTTATTTAATTAATTACC+TGG | - | chr4.3:37431948-37431967 | None:intergenic | 10.0% |
| !!! | TTTTTTAAGATACATAAAAA+TGG | - | chr4.3:37433382-37433401 | None:intergenic | 10.0% |
| !! | AAAAAAAAATGACAAATTTG+TGG | + | chr4.3:37433396-37433415 | MS.gene54577:intron | 15.0% |
| !! | TAAATTATAGAGTTGTAAAA+TGG | - | chr4.3:37433686-37433705 | None:intergenic | 15.0% |
| !!! | ATTTATTTATTTCAGGTTTA+TGG | + | chr4.3:37433437-37433456 | MS.gene54577:intron | 15.0% |
| !! | AATTAATTTATCCAAACAGA+TGG | + | chr4.3:37432607-37432626 | MS.gene54577:intron | 20.0% |
| !! | AATTTACAATTTGTACAACT+TGG | + | chr4.3:37432215-37432234 | MS.gene54577:intron | 20.0% |
| !! | ACTTCAATAATTATGTGTAT+AGG | + | chr4.3:37432332-37432351 | MS.gene54577:intron | 20.0% |
| !! | CTATGATTATATATAAAGGT+AGG | - | chr4.3:37433919-37433938 | None:intergenic | 20.0% |
| !! | GCATCTAATTATATATTACA+GGG | + | chr4.3:37434205-37434224 | MS.gene54577:intron | 20.0% |
| !! | TATTTAATTAATTACCTGGT+AGG | - | chr4.3:37431944-37431963 | None:intergenic | 20.0% |
| !! | TGCATCTAATTATATATTAC+AGG | + | chr4.3:37434204-37434223 | MS.gene54577:intron | 20.0% |
| !!! | AATTCAATGTTTTTTGACAA+TGG | + | chr4.3:37433719-37433738 | MS.gene54577:intron | 20.0% |
| !!! | ATTCTGCATATTTTAATTGT+AGG | + | chr4.3:37433997-37434016 | MS.gene54577:intron | 20.0% |
| !!! | ATTGGTTCATTTGATTTTAT+TGG | + | chr4.3:37433552-37433571 | MS.gene54577:CDS | 20.0% |
| !!! | TTGTTGTTCATTTGTATTAT+AGG | + | chr4.3:37432411-37432430 | MS.gene54577:intron | 20.0% |
| ! | AAAGAATCTGTTAAGTAACT+AGG | - | chr4.3:37433636-37433655 | None:intergenic | 25.0% |
| ! | AAAGTACAAGAAATCTCAAA+AGG | + | chr4.3:37433229-37433248 | MS.gene54577:intron | 25.0% |
| ! | AAGTACAAGAAATCTCAAAA+GGG | + | chr4.3:37433230-37433249 | MS.gene54577:intron | 25.0% |
| ! | AGTCAAGTCAATATATATGA+TGG | + | chr4.3:37432512-37432531 | MS.gene54577:intron | 25.0% |
| ! | ATCGAAGATAAAATAGATGA+CGG | - | chr4.3:37434098-37434117 | None:intergenic | 25.0% |
| ! | CAAAAGTAATAAAGAAGAGA+AGG | - | chr4.3:37431792-37431811 | None:intergenic | 25.0% |
| ! | CTAATTATATATTACAGGGA+AGG | + | chr4.3:37434209-37434228 | MS.gene54577:intron | 25.0% |
| ! | TAGTTACTTAACAGATTCTT+TGG | + | chr4.3:37433635-37433654 | MS.gene54577:CDS | 25.0% |
| ! | TATAGAGTTGTAAAATGGAT+TGG | - | chr4.3:37433681-37433700 | None:intergenic | 25.0% |
| ! | TCTATTTACATCACAGAAAA+TGG | + | chr4.3:37433885-37433904 | MS.gene54577:CDS | 25.0% |
| !! | ACCTTTGTTGATTATAAGAA+TGG | + | chr4.3:37434314-37434333 | MS.gene54577:CDS | 25.0% |
| !! | AGGATTATTGTACTTTTCTT+TGG | - | chr4.3:37433865-37433884 | None:intergenic | 25.0% |
| !! | GAACAATAGAGAAATCTTTT+GGG | - | chr4.3:37434146-37434165 | None:intergenic | 25.0% |
| !! | GAAGACAATAAACAATGTTT+TGG | - | chr4.3:37432898-37432917 | None:intergenic | 25.0% |
| !! | GTTTGCTTTGTATTGAATTT+TGG | - | chr4.3:37433522-37433541 | None:intergenic | 25.0% |
| !! | TGAACAATAGAGAAATCTTT+TGG | - | chr4.3:37434147-37434166 | None:intergenic | 25.0% |
| !! | TTTTCTGTGATGTAAATAGA+AGG | - | chr4.3:37433885-37433904 | None:intergenic | 25.0% |
| !!! | AAAAGATTTTCAAGACTATG+CGG | + | chr4.3:37432983-37433002 | MS.gene54577:CDS | 25.0% |
| !!! | AGAGCAATTGATTTTATGTA+TGG | + | chr4.3:37433329-37433348 | MS.gene54577:CDS | 25.0% |
| !!! | ATATATTGACTTGACTTACT+TGG | - | chr4.3:37432508-37432527 | None:intergenic | 25.0% |
| !!! | CAATTGATTTTATGTATGGA+TGG | + | chr4.3:37433333-37433352 | MS.gene54577:CDS | 25.0% |
| !!! | TAGTTTTATTTGTTCATACC+AGG | - | chr4.3:37432143-37432162 | None:intergenic | 25.0% |
| !!! | TGTTTGTATGATTAGTTTGA+AGG | + | chr4.3:37432059-37432078 | MS.gene54577:intron | 25.0% |
| AAGCAAACTAAACTACTCAT+TGG | + | chr4.3:37433534-37433553 | MS.gene54577:CDS | 30.0% | |
| AATGAAGCAATGTCAAGAAT+AGG | - | chr4.3:37431871-37431890 | None:intergenic | 30.0% | |
| AATTCATCGCGAATAGAAAA+GGG | - | chr4.3:37433748-37433767 | None:intergenic | 30.0% | |
| ATGTCAAGGGTTATTATGTA+TGG | + | chr4.3:37434237-37434256 | MS.gene54577:CDS | 30.0% | |
| GCCATTCTTATAATCAACAA+AGG | - | chr4.3:37434318-37434337 | None:intergenic | 30.0% | |
| TGACACATATCATCAATACA+AGG | + | chr4.3:37432287-37432306 | MS.gene54577:CDS | 30.0% | |
| TTGACATTGCTTCATTGAAT+CGG | + | chr4.3:37431875-37431894 | MS.gene54577:CDS | 30.0% | |
| TTTCAGCAAGTCATAGAAAA+TGG | - | chr4.3:37433955-37433974 | None:intergenic | 30.0% | |
| ! | ATTAGTGACTCTTTTCCATT+GGG | + | chr4.3:37432809-37432828 | MS.gene54577:CDS | 30.0% |
| ! | CAAACTTTAGAAGAAGAGTA+TGG | + | chr4.3:37432840-37432859 | MS.gene54577:CDS | 30.0% |
| ! | CATTGTTCGACAATTTTGAA+TGG | + | chr4.3:37434261-37434280 | MS.gene54577:CDS | 30.0% |
| ! | GAACTTTGTTTCAAGGAATT+TGG | + | chr4.3:37433005-37433024 | MS.gene54577:CDS | 30.0% |
| ! | GATAAAATAGATGACGGTAA+TGG | - | chr4.3:37434092-37434111 | None:intergenic | 30.0% |
| ! | GCTTATGTTTCTAATGAGAA+AGG | + | chr4.3:37434400-37434419 | MS.gene54577:CDS | 30.0% |
| ! | GTATTGATGATATGTGTCAA+TGG | - | chr4.3:37432286-37432305 | None:intergenic | 30.0% |
| !! | ACTCTTCTTCTAAAGTTTGA+GGG | - | chr4.3:37432839-37432858 | None:intergenic | 30.0% |
| !! | TACTCTTCTTCTAAAGTTTG+AGG | - | chr4.3:37432840-37432859 | None:intergenic | 30.0% |
| AAAAGATCACGAATTCCTCT+TGG | - | chr4.3:37433834-37433853 | None:intergenic | 35.0% | |
| AAGATACCAATTCGCTACTA+AGG | - | chr4.3:37433270-37433289 | None:intergenic | 35.0% | |
| CAATATTCTAGACCAGGATA+TGG | - | chr4.3:37432485-37432504 | None:intergenic | 35.0% | |
| CAATGGAAAAGAGTCACTAA+TGG | - | chr4.3:37432810-37432829 | None:intergenic | 35.0% | |
| CAATTCATCGCGAATAGAAA+AGG | - | chr4.3:37433749-37433768 | None:intergenic | 35.0% | |
| CGATTCTACATTATCAGTTG+AGG | + | chr4.3:37434035-37434054 | MS.gene54577:CDS | 35.0% | |
| GAAGCAATCTTGATACCAAT+AGG | - | chr4.3:37433792-37433811 | None:intergenic | 35.0% | |
| TAAGTAACTAGGTCTAGCAT+TGG | - | chr4.3:37433625-37433644 | None:intergenic | 35.0% | |
| TGGATAAACGTACAACCATT+CGG | - | chr4.3:37433814-37433833 | None:intergenic | 35.0% | |
| TGGATACTCACACTATAAGA+GGG | - | chr4.3:37432878-37432897 | None:intergenic | 35.0% | |
| TGGTAGAACACCAAGTATAT+GGG | + | chr4.3:37432097-37432116 | MS.gene54577:CDS | 35.0% | |
| TGGTGATAGAGTCAAGTATT+GGG | + | chr4.3:37433025-37433044 | MS.gene54577:CDS | 35.0% | |
| TGGTTGAATCCAAATTGTAC+CGG | + | chr4.3:37433125-37433144 | MS.gene54577:CDS | 35.0% | |
| TTGACATGCAGAAAAGATCA+AGG | + | chr4.3:37432239-37432258 | MS.gene54577:intron | 35.0% | |
| TTGGATACTCACACTATAAG+AGG | - | chr4.3:37432879-37432898 | None:intergenic | 35.0% | |
| TTTATCTTCGATCTGCCATT+AGG | + | chr4.3:37434106-37434125 | MS.gene54577:CDS | 35.0% | |
| TTTATGGATCCACTAACATC+AGG | + | chr4.3:37433453-37433472 | MS.gene54577:CDS | 35.0% | |
| ! | AAATCTCAAAAGGGCGTAAT+AGG | + | chr4.3:37433239-37433258 | MS.gene54577:CDS | 35.0% |
| ! | ACTTTAGAAGAAGAGTATGG+TGG | + | chr4.3:37432843-37432862 | MS.gene54577:CDS | 35.0% |
| ! | CATACAGATTTTCCATATCC+TGG | + | chr4.3:37432470-37432489 | MS.gene54577:CDS | 35.0% |
| ! | CATTAGTGACTCTTTTCCAT+TGG | + | chr4.3:37432808-37432827 | MS.gene54577:CDS | 35.0% |
| ! | GAAGATGAAGTGTTACCTAA+TGG | - | chr4.3:37434124-37434143 | None:intergenic | 35.0% |
| ! | GACAATTTTGAATGGTCATC+CGG | + | chr4.3:37434269-37434288 | MS.gene54577:CDS | 35.0% |
| ! | TGGTAATGCGTAACCAAATA+GGG | - | chr4.3:37433170-37433189 | None:intergenic | 35.0% |
| ! | TTGGTGATAGAGTCAAGTAT+TGG | + | chr4.3:37433024-37433043 | MS.gene54577:CDS | 35.0% |
| !! | TTGGTAATGCGTAACCAAAT+AGG | - | chr4.3:37433171-37433190 | None:intergenic | 35.0% |
| AAGATCAAGGATGGAAGCAA+TGG | + | chr4.3:37432252-37432271 | MS.gene54577:CDS | 40.0% | |
| AATCGGAATAGTTTCCCTCA+AGG | + | chr4.3:37431892-37431911 | MS.gene54577:CDS | 40.0% | |
| ACCAGGATATCTATGAGTGA+AGG | - | chr4.3:37432126-37432145 | None:intergenic | 40.0% | |
| ACCTTCACTCATAGATATCC+TGG | + | chr4.3:37432122-37432141 | MS.gene54577:CDS | 40.0% | |
| ACTTGGCAATATTCTAGACC+AGG | - | chr4.3:37432491-37432510 | None:intergenic | 40.0% | |
| AGCCAAAATGGCTATGCAAA+TGG | + | chr4.3:37433074-37433093 | MS.gene54577:CDS | 40.0% | |
| ATCAACGAGCTACTAGCTAA+TGG | + | chr4.3:37432682-37432701 | MS.gene54577:CDS | 40.0% | |
| ATCAGTTGAGGAATCACTCT+TGG | + | chr4.3:37434047-37434066 | MS.gene54577:CDS | 40.0% | |
| CAAACAGATGGAAAGCTTAG+TGG | + | chr4.3:37432619-37432638 | MS.gene54577:intron | 40.0% | |
| CACTAAGCTTTCCATCTGTT+TGG | - | chr4.3:37432621-37432640 | None:intergenic | 40.0% | |
| CATGCAGAAAAGATCAAGGA+TGG | + | chr4.3:37432243-37432262 | MS.gene54577:intron | 40.0% | |
| CTTGTACACATCAACAACAG+CGG | - | chr4.3:37433207-37433226 | None:intergenic | 40.0% | |
| GCATAACCTTAGTAGCGAAT+TGG | + | chr4.3:37433261-37433280 | MS.gene54577:CDS | 40.0% | |
| GCCAAAATGGCTATGCAAAT+GGG | + | chr4.3:37433075-37433094 | MS.gene54577:CDS | 40.0% | |
| GGATAATCTCCTGATGTTAG+TGG | - | chr4.3:37433465-37433484 | None:intergenic | 40.0% | |
| GTATCAAGATTGCTTCCGAA+TGG | + | chr4.3:37433796-37433815 | MS.gene54577:CDS | 40.0% | |
| GTGGTAGAACACCAAGTATA+TGG | + | chr4.3:37432096-37432115 | MS.gene54577:CDS | 40.0% | |
| TCCAAATCTGACGCTATAAC+CGG | - | chr4.3:37434291-37434310 | None:intergenic | 40.0% | |
| TGGTTGTACGTTTATCCAAG+AGG | + | chr4.3:37433816-37433835 | MS.gene54577:CDS | 40.0% | |
| TTGAATCCAAATTGTACCGG+AGG | + | chr4.3:37433128-37433147 | MS.gene54577:CDS | 40.0% | |
| TTTGGTCAATCCAGCATGTA+AGG | + | chr4.3:37433653-37433672 | MS.gene54577:intron | 40.0% | |
| ! | CTATGCGGAACTTTGTTTCA+AGG | + | chr4.3:37432998-37433017 | MS.gene54577:CDS | 40.0% |
| ! | TCCCTCAAGGCTTTATCTTT+GGG | + | chr4.3:37431905-37431924 | MS.gene54577:CDS | 40.0% |
| ! | TCGGATTTGGAATTTGAGAG+TGG | - | chr4.3:37433293-37433312 | None:intergenic | 40.0% |
| ! | TTCCCTCAAGGCTTTATCTT+TGG | + | chr4.3:37431904-37431923 | MS.gene54577:CDS | 40.0% |
| !! | GGTCTAGCATTGGTTAACAA+TGG | - | chr4.3:37433615-37433634 | None:intergenic | 40.0% |
| !!! | TCTTTCTGCTGCTTTTTGGT+CGG | - | chr4.3:37433312-37433331 | None:intergenic | 40.0% |
| !!! | TTGCTCTTTCTGCTGCTTTT+TGG | - | chr4.3:37433316-37433335 | None:intergenic | 40.0% |
| AAGTTTGAGGGAGATCCCAA+TGG | - | chr4.3:37432827-37432846 | None:intergenic | 45.0% | |
| ACAGATGGAAAGCTTAGTGG+TGG | + | chr4.3:37432622-37432641 | MS.gene54577:intron | 45.0% | |
| ACCACAAAGCAGACAACTTC+TGG | - | chr4.3:37434352-37434371 | None:intergenic | 45.0% | |
| ACCAGAAGTTGTCTGCTTTG+TGG | + | chr4.3:37434348-37434367 | MS.gene54577:CDS | 45.0% | |
| CCCCAAAGATAAAGCCTTGA+GGG | - | chr4.3:37431909-37431928 | None:intergenic | 45.0% | |
| GAATCACCTCCGGTACAATT+TGG | - | chr4.3:37433137-37433156 | None:intergenic | 45.0% | |
| GGTTAACAATGGTGCATCAG+AGG | - | chr4.3:37433604-37433623 | None:intergenic | 45.0% | |
| TCCGGTTATAGCGTCAGATT+TGG | + | chr4.3:37434287-37434306 | MS.gene54577:CDS | 45.0% | |
| TGAATTGCAGTTGAGCGCAA+CGG | + | chr4.3:37433762-37433781 | MS.gene54577:intron | 45.0% | |
| ! | AGGGAAGGTGTGAATGTCAA+GGG | + | chr4.3:37434224-37434243 | MS.gene54577:intron | 45.0% |
| ! | AGTGGTGGTGTCAATCAAGA+AGG | + | chr4.3:37432637-37432656 | MS.gene54577:CDS | 45.0% |
| ! | CCCTCAAGGCTTTATCTTTG+GGG | + | chr4.3:37431906-37431925 | MS.gene54577:CDS | 45.0% |
| ! | GCCCATTTGCATAGCCATTT+TGG | - | chr4.3:37433079-37433098 | None:intergenic | 45.0% |
| ! | GGGTTACTTTGAATGAGCCA+TGG | + | chr4.3:37433045-37433064 | MS.gene54577:CDS | 45.0% |
| ! | TTTGAAGGTGCAGCAACAGA+AGG | + | chr4.3:37432074-37432093 | MS.gene54577:CDS | 45.0% |
| !! | GTGAAGGTGTCCCATATACT+TGG | - | chr4.3:37432110-37432129 | None:intergenic | 45.0% |
| !! | TGGATTGGTTCCTTACATGC+TGG | - | chr4.3:37433666-37433685 | None:intergenic | 45.0% |
| !!! | TGCTGCTTTTTGGTCGGATT+TGG | - | chr4.3:37433306-37433325 | None:intergenic | 45.0% |
| !!! | ATAAATTTGAATTAAATTTT+TGG | - | chr4.3:37433423-37433442 | None:intergenic | 5.0% |
| AACCAACTAGAGCAACGACC+CGG | - | chr4.3:37433110-37433129 | None:intergenic | 50.0% | |
| CCATGGAGCTACAGCCAAAA+TGG | + | chr4.3:37433062-37433081 | MS.gene54577:CDS | 50.0% | |
| GAATTGCAGTTGAGCGCAAC+GGG | + | chr4.3:37433763-37433782 | MS.gene54577:intron | 50.0% | |
| GCCCCAAAGATAAAGCCTTG+AGG | - | chr4.3:37431910-37431929 | None:intergenic | 50.0% | |
| TGGCTATGCAAATGGGCGAA+TGG | + | chr4.3:37433082-37433101 | MS.gene54577:CDS | 50.0% | |
| TGGTAACCTAGCACCAACGA+GGG | - | chr4.3:37433502-37433521 | None:intergenic | 50.0% | |
| TTCTGCGATCGAGCCCTATT+TGG | + | chr4.3:37433154-37433173 | MS.gene54577:CDS | 50.0% | |
| ! | AAAAGCATGAGAGCCCTCGT+TGG | + | chr4.3:37433486-37433505 | MS.gene54577:CDS | 50.0% |
| ! | ACGAGGGCTCTCATGCTTTT+AGG | - | chr4.3:37433486-37433505 | None:intergenic | 50.0% |
| ! | CAGGGAAGGTGTGAATGTCA+AGG | + | chr4.3:37434223-37434242 | MS.gene54577:intron | 50.0% |
| ! | TTGGTAACCTAGCACCAACG+AGG | - | chr4.3:37433503-37433522 | None:intergenic | 50.0% |
| !! | CAAGGCTTTATCTTTGGGGC+TGG | + | chr4.3:37431910-37431929 | MS.gene54577:CDS | 50.0% |
| !!! | CCATTTTGGCTGTAGCTCCA+TGG | - | chr4.3:37433065-37433084 | None:intergenic | 50.0% |
| CAGCGGCATGTGCAAGAAGT+TGG | - | chr4.3:37433190-37433209 | None:intergenic | 55.0% | |
| CTCGATCGCAGAATCACCTC+CGG | - | chr4.3:37433147-37433166 | None:intergenic | 55.0% | |
| GAGCGCAACGGGAAACCTAT+TGG | + | chr4.3:37433774-37433793 | MS.gene54577:CDS | 55.0% | |
| TGCAAATGGGCGAATGGCAC+CGG | + | chr4.3:37433088-37433107 | MS.gene54577:CDS | 55.0% | |
| ! | GAAGGTGCAGCAACAGAAGG+TGG | + | chr4.3:37432077-37432096 | MS.gene54577:CDS | 55.0% |
| ! | GGCTGGTTCATCTTCCTACC+AGG | + | chr4.3:37431927-37431946 | MS.gene54577:CDS | 55.0% |
| CACCGGGTCGTTGCTCTAGT+TGG | + | chr4.3:37433105-37433124 | MS.gene54577:CDS | 60.0% | |
| GCAAATGGGCGAATGGCACC+GGG | + | chr4.3:37433089-37433108 | MS.gene54577:CDS | 60.0% | |
| ! | TGAGAGCCCTCGTTGGTGCT+AGG | + | chr4.3:37433493-37433512 | MS.gene54577:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 37431775 | 37434442 | 37431775 | ID=MS.gene54577 |
| chr4.3 | mRNA | 37431775 | 37434442 | 37431775 | ID=MS.gene54577.t1;Parent=MS.gene54577 |
| chr4.3 | exon | 37431775 | 37431948 | 37431775 | ID=MS.gene54577.t1.exon1;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37431775 | 37431948 | 37431775 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432074 | 37432143 | 37432074 | ID=MS.gene54577.t1.exon2;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432074 | 37432143 | 37432074 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432250 | 37432308 | 37432250 | ID=MS.gene54577.t1.exon3;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432250 | 37432308 | 37432250 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432433 | 37432508 | 37432433 | ID=MS.gene54577.t1.exon4;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432433 | 37432508 | 37432433 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432626 | 37432703 | 37432626 | ID=MS.gene54577.t1.exon5;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432626 | 37432703 | 37432626 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432799 | 37432886 | 37432799 | ID=MS.gene54577.t1.exon6;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432799 | 37432886 | 37432799 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37432983 | 37433208 | 37432983 | ID=MS.gene54577.t1.exon7;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37432983 | 37433208 | 37432983 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37433239 | 37433354 | 37433239 | ID=MS.gene54577.t1.exon8;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37433239 | 37433354 | 37433239 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37433452 | 37433669 | 37433452 | ID=MS.gene54577.t1.exon9;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37433452 | 37433669 | 37433452 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37433772 | 37433906 | 37433772 | ID=MS.gene54577.t1.exon10;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37433772 | 37433906 | 37433772 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37434019 | 37434127 | 37434019 | ID=MS.gene54577.t1.exon11;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37434019 | 37434127 | 37434019 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| chr4.3 | exon | 37434226 | 37434442 | 37434226 | ID=MS.gene54577.t1.exon12;Parent=MS.gene54577.t1 |
| chr4.3 | CDS | 37434226 | 37434442 | 37434226 | ID=cds.MS.gene54577.t1;Parent=MS.gene54577.t1 |
| Gene Sequence |
| Protein sequence |
