AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056780.t1 MTR_8g030880 97.712 306 7 0 1 306 1 306 0.0 620
MS.gene056780.t1 MTR_7g077670 76.129 310 73 1 1 310 2 310 5.67e-175 487
MS.gene056780.t1 MTR_1g034140 31.875 320 196 8 9 314 26 337 4.14e-44 154
MS.gene056780.t1 MTR_4g011720 31.636 275 182 3 29 303 35 303 2.93e-41 145
MS.gene056780.t1 MTR_2g083030 32.130 277 172 6 2 274 34 298 5.93e-40 143
MS.gene056780.t1 MTR_7g451860 33.094 278 151 7 9 269 40 299 2.54e-39 141
MS.gene056780.t1 MTR_7g047670 33.094 278 151 7 9 269 40 299 2.54e-39 141
MS.gene056780.t1 MTR_4g011690 30.645 310 199 7 10 309 9 312 2.83e-39 140
MS.gene056780.t1 MTR_1g102070 33.225 307 189 8 6 302 60 360 2.95e-38 139
MS.gene056780.t1 MTR_5g005570 32.342 269 162 9 9 269 36 292 4.31e-38 138
MS.gene056780.t1 MTR_5g025090 31.615 291 181 6 10 296 5 281 9.73e-38 136
MS.gene056780.t1 MTR_4g087100 29.586 338 198 12 2 314 23 345 1.82e-37 137
MS.gene056780.t1 MTR_3g088745 29.814 322 195 8 1 302 27 337 3.04e-37 136
MS.gene056780.t1 MTR_6g464620 32.704 318 181 11 6 302 60 365 1.27e-36 135
MS.gene056780.t1 MTR_4g074130 30.112 269 168 7 3 262 33 290 1.90e-36 134
MS.gene056780.t1 MTR_4g087110 29.573 328 203 10 6 314 27 345 2.25e-36 134
MS.gene056780.t1 MTR_8g033380 31.132 318 185 10 6 302 50 354 1.58e-35 132
MS.gene056780.t1 MTR_2g437380 32.090 268 158 9 9 262 49 306 3.16e-34 128
MS.gene056780.t1 MTR_5g027230 29.000 300 191 6 10 303 6 289 6.25e-34 126
MS.gene056780.t1 MTR_7g062550 30.323 310 198 10 9 311 59 357 6.93e-34 127
MS.gene056780.t1 MTR_2g102570 29.010 293 195 6 10 296 52 337 7.44e-34 127
MS.gene056780.t1 MTR_4g021380 31.132 318 188 8 9 305 6 313 1.22e-33 125
MS.gene056780.t1 MTR_4g087090 29.787 329 206 10 1 314 26 344 1.74e-33 126
MS.gene056780.t1 MTR_1g034120 27.893 337 207 13 2 314 23 347 1.81e-33 126
MS.gene056780.t1 MTR_8g093930 26.384 307 209 7 8 302 45 346 1.85e-33 126
MS.gene056780.t1 MTR_7g062580 29.206 315 195 11 9 311 54 352 1.89e-33 126
MS.gene056780.t1 MTR_3g040410 32.423 293 166 9 20 300 23 295 3.80e-33 124
MS.gene056780.t1 MTR_3g096500 28.076 317 187 7 11 302 67 367 7.50e-33 125
MS.gene056780.t1 MTR_1g081840 29.870 308 193 8 11 302 54 354 1.27e-32 124
MS.gene056780.t1 MTR_2g083000 29.964 277 159 8 6 269 34 288 1.28e-32 123
MS.gene056780.t1 MTR_4g100600 29.934 304 191 9 8 296 7 303 1.29e-32 123
MS.gene056780.t1 MTR_7g062570 28.435 313 200 12 9 311 54 352 1.46e-32 124
MS.gene056780.t1 MTR_5g025050 28.866 291 189 6 10 296 5 281 2.48e-32 122
MS.gene056780.t1 MTR_4g087120 27.829 327 210 8 6 314 27 345 3.01e-32 123
MS.gene056780.t1 MTR_1g011580 28.475 295 198 7 10 302 63 346 6.23e-32 122
MS.gene056780.t1 MTR_1g011600 30.224 268 174 6 27 288 36 296 9.79e-32 120
MS.gene056780.t1 MTR_8g075830 31.203 266 167 6 2 260 36 292 1.00e-31 122
MS.gene056780.t1 MTR_1g034060 28.402 338 204 14 2 314 23 347 1.15e-31 121
MS.gene056780.t1 MTR_0009s0050 29.934 304 192 10 1 294 38 330 4.20e-31 120
MS.gene056780.t1 MTR_0009s0050 30.363 303 192 10 1 294 38 330 4.26e-31 120
MS.gene056780.t1 MTR_5g055690 29.664 327 191 14 2 311 41 345 7.84e-31 119
MS.gene056780.t1 MTR_2g070870 29.338 317 184 10 10 306 28 324 7.95e-31 118
MS.gene056780.t1 MTR_6g088665 28.125 320 187 10 10 299 21 327 9.39e-31 119
MS.gene056780.t1 MTR_6g088665 28.037 321 187 10 10 299 21 328 1.09e-30 118
MS.gene056780.t1 MTR_5g065010 28.939 311 205 9 6 310 40 340 1.88e-30 118
MS.gene056780.t1 MTR_8g102600 28.125 320 187 11 10 299 12 318 3.24e-30 117
MS.gene056780.t1 MTR_3g108520 28.431 306 191 6 8 295 5 300 3.30e-30 116
MS.gene056780.t1 MTR_5g024940 27.333 300 181 7 10 304 6 273 3.46e-30 115
MS.gene056780.t1 MTR_4g087140 27.832 309 188 11 27 314 52 346 5.79e-30 117
MS.gene056780.t1 MTR_4g015790 27.129 317 210 9 8 310 60 369 6.65e-30 117
MS.gene056780.t1 MTR_7g090520 26.667 300 194 9 10 295 10 297 8.91e-30 115
MS.gene056780.t1 MTR_7g062600 29.568 301 193 9 1 294 47 335 9.36e-30 116
MS.gene056780.t1 MTR_7g056347 27.517 298 199 8 6 295 68 356 1.06e-29 116
MS.gene056780.t1 MTR_3g092890 27.835 291 193 7 9 292 37 317 2.33e-29 115
MS.gene056780.t1 MTR_8g024120 27.946 297 196 8 2 292 39 323 2.67e-29 114
MS.gene056780.t1 MTR_3g070860 29.749 279 163 10 2 261 42 306 2.89e-29 115
MS.gene056780.t1 MTR_4g100590 28.947 304 189 8 8 296 7 298 3.64e-29 114
MS.gene056780.t1 MTR_1g070120 28.966 290 191 7 10 292 38 319 1.34e-28 113
MS.gene056780.t1 MTR_8g009110 27.961 304 203 9 1 297 56 350 2.43e-28 112
MS.gene056780.t1 MTR_7g063730 28.772 285 188 7 22 300 78 353 3.37e-28 112
MS.gene056780.t1 MTR_4g021360 27.476 313 206 8 6 306 8 311 3.98e-28 111
MS.gene056780.t1 MTR_3g091350 28.527 319 204 10 1 311 55 357 4.20e-28 112
MS.gene056780.t1 MTR_8g075890 28.358 268 172 6 2 260 36 292 1.79e-27 110
MS.gene056780.t1 MTR_5g055680 27.393 303 201 10 1 294 38 330 2.88e-27 109
MS.gene056780.t1 MTR_5g048470 30.263 304 188 12 2 294 47 337 3.49e-27 109
MS.gene056780.t1 MTR_2g069060 28.477 302 184 7 4 292 48 330 3.52e-27 109
MS.gene056780.t1 MTR_5g032870 28.197 305 193 8 3 294 36 327 3.66e-27 109
MS.gene056780.t1 MTR_2g072890 27.673 318 200 12 8 311 50 351 5.53e-27 108
MS.gene056780.t1 MTR_7g068650 26.948 308 201 9 3 295 47 345 8.90e-27 108
MS.gene056780.t1 MTR_3g083370 25.237 317 202 11 3 308 2 294 9.28e-27 107
MS.gene056780.t1 MTR_2g025120 26.316 304 192 11 4 295 3 286 1.19e-26 107
MS.gene056780.t1 MTR_5g032880 27.597 308 209 7 3 303 374 674 1.31e-26 110
MS.gene056780.t1 MTR_5g032880 25.828 302 198 8 2 294 35 319 5.93e-26 108
MS.gene056780.t1 MTR_2g068960 29.338 317 176 10 4 296 62 354 1.35e-26 108
MS.gene056780.t1 MTR_8g028435 28.939 311 188 9 2 297 57 349 1.73e-26 107
MS.gene056780.t1 MTR_8g064200 32.270 282 170 11 1 272 43 313 1.86e-26 107
MS.gene056780.t1 MTR_1g033810 28.975 283 164 8 1 264 38 302 1.97e-26 107
MS.gene056780.t1 MTR_8g064200 32.270 282 170 11 1 272 48 318 2.24e-26 107
MS.gene056780.t1 MTR_5g082750 28.990 307 190 11 3 295 47 339 2.67e-26 107
MS.gene056780.t1 MTR_2g069090 29.276 304 184 11 6 295 69 355 2.70e-26 107
MS.gene056780.t1 MTR_8g009080 30.921 304 178 12 6 295 95 380 2.74e-26 107
MS.gene056780.t1 MTR_3g026150 27.653 311 182 14 3 292 53 341 3.49e-26 106
MS.gene056780.t1 MTR_2g068950 28.247 308 191 8 4 296 62 354 4.28e-26 106
MS.gene056780.t1 MTR_3g117420 30.479 292 175 12 10 286 52 330 4.57e-26 106
MS.gene056780.t1 MTR_2g019370 25.926 324 194 11 10 306 28 332 5.45e-26 105
MS.gene056780.t1 MTR_4g011720 30.303 231 144 5 29 248 35 259 7.78e-26 103
MS.gene056780.t1 MTR_5g055820 27.922 308 188 13 2 293 41 330 7.91e-26 105
MS.gene056780.t1 MTR_1g086550 26.837 313 184 8 8 292 18 313 8.29e-26 105
MS.gene056780.t1 MTR_4g096840 26.537 309 189 10 4 292 23 313 8.86e-26 105
MS.gene056780.t1 MTR_0328s0030 27.900 319 210 10 1 311 36 342 9.95e-26 105
MS.gene056780.t1 MTR_0009s0480 31.343 268 167 10 1 260 37 295 1.01e-25 105
MS.gene056780.t1 MTR_5g055900 27.063 303 202 10 1 294 38 330 1.19e-25 105
MS.gene056780.t1 MTR_3g464530 30.556 324 166 14 10 307 34 324 1.20e-25 104
MS.gene056780.t1 MTR_8g093980 27.036 307 203 8 6 301 60 356 1.21e-25 105
MS.gene056780.t1 MTR_7g045650 30.702 228 143 8 24 245 76 294 2.02e-25 103
MS.gene056780.t1 MTR_5g059130 29.054 296 190 8 8 293 42 327 2.05e-25 104
MS.gene056780.t1 MTR_3g045230 29.293 297 184 8 10 295 56 337 2.07e-25 104
MS.gene056780.t1 MTR_4g087130 26.748 329 210 8 6 314 27 344 2.30e-25 104
MS.gene056780.t1 MTR_3g091360 28.105 306 203 7 1 300 48 342 3.07e-25 103
MS.gene056780.t1 MTR_5g085330 26.144 306 198 10 1 295 1 289 4.59e-25 102
MS.gene056780.t1 MTR_5g048850 26.861 309 193 12 1 293 38 329 5.44e-25 103
MS.gene056780.t1 MTR_2g072910 29.057 265 167 9 8 261 49 303 5.74e-25 103
MS.gene056780.t1 MTR_8g063070 28.244 262 173 6 4 261 66 316 7.46e-25 103
MS.gene056780.t1 MTR_5g025060 26.471 306 165 8 10 302 6 264 7.74e-25 101
MS.gene056780.t1 MTR_1g070080 27.759 299 189 8 9 294 37 321 7.92e-25 102
MS.gene056780.t1 MTR_8g008930 28.105 306 194 11 2 295 57 348 8.67e-25 102
MS.gene056780.t1 MTR_5g048550 29.851 268 167 10 2 260 41 296 9.71e-25 102
MS.gene056780.t1 MTR_8g009090 28.832 274 161 8 2 261 57 310 1.43e-24 102
MS.gene056780.t1 MTR_2g069010 28.438 320 187 11 4 302 68 366 3.03e-24 101
MS.gene056780.t1 MTR_4g117880 28.662 314 186 11 6 301 61 354 3.09e-24 101
MS.gene056780.t1 MTR_3g058610 26.866 268 176 6 2 260 36 292 3.38e-24 101
MS.gene056780.t1 MTR_2g069020 29.245 318 184 11 4 302 66 361 4.13e-24 101
MS.gene056780.t1 MTR_4g123020 26.460 291 201 7 10 294 20 303 4.36e-24 100
MS.gene056780.t1 MTR_2g069020 29.560 318 183 11 4 302 66 361 4.60e-24 101
MS.gene056780.t1 MTR_2g033270 24.667 300 197 8 8 294 17 300 4.76e-24 100
MS.gene056780.t1 MTR_8g009160 27.508 309 191 10 2 295 57 347 9.89e-24 100
MS.gene056780.t1 MTR_5g048740 30.483 269 169 10 1 260 36 295 1.13e-23 99.8
MS.gene056780.t1 MTR_5g022020 27.612 268 174 7 2 260 36 292 1.81e-23 99.4
MS.gene056780.t1 MTR_5g048570 25.338 296 202 9 8 294 43 328 2.24e-23 99.0
MS.gene056780.t1 MTR_7g102720 27.946 297 184 7 10 293 37 316 2.25e-23 98.6
MS.gene056780.t1 MTR_3g088565 25.926 297 195 10 10 293 3 287 2.74e-23 97.8
MS.gene056780.t1 MTR_1g070085 27.491 291 197 7 10 293 37 320 3.27e-23 98.2
MS.gene056780.t1 MTR_1g070085 27.491 291 197 7 10 293 37 320 3.27e-23 98.2
MS.gene056780.t1 MTR_8g074050 30.519 308 187 12 10 303 52 346 3.60e-23 98.2
MS.gene056780.t1 MTR_7g102820 26.667 330 198 10 8 311 65 376 3.69e-23 98.6
MS.gene056780.t1 MTR_3g043900 28.378 296 187 8 10 295 56 336 5.14e-23 97.8
MS.gene056780.t1 MTR_1g093110 28.065 310 176 8 6 293 71 355 8.40e-23 97.4
MS.gene056780.t1 MTR_1g070135 26.871 294 192 9 10 292 38 319 8.55e-23 97.1
MS.gene056780.t1 MTR_2g069190 27.575 301 192 9 6 295 69 354 9.91e-23 97.4
MS.gene056780.t1 MTR_5g059140 28.016 257 175 4 10 260 42 294 1.29e-22 96.7
MS.gene056780.t1 MTR_8g461330 28.000 275 158 8 8 260 25 281 1.50e-22 96.3
MS.gene056780.t1 MTR_7g081710 26.384 307 204 9 10 304 49 345 1.62e-22 96.7
MS.gene056780.t1 MTR_8g074070 28.803 309 190 13 10 301 52 347 2.09e-22 96.3
MS.gene056780.t1 MTR_1g093120 27.835 291 186 8 4 284 66 342 2.25e-22 96.3
MS.gene056780.t1 MTR_4g024660 30.112 269 159 9 4 261 66 316 3.12e-22 95.9
MS.gene056780.t1 MTR_4g116010 31.271 291 180 7 3 284 43 322 3.48e-22 95.5
MS.gene056780.t1 MTR_5g055800 26.791 321 177 10 1 293 38 328 3.55e-22 95.5
MS.gene056780.t1 MTR_6g015950 27.972 286 182 8 10 284 39 311 4.53e-22 95.1
MS.gene056780.t1 MTR_1g093140 29.412 306 160 12 6 284 74 350 5.27e-22 95.5
MS.gene056780.t1 MTR_3g063180 28.155 309 194 10 3 293 35 333 5.53e-22 95.1
MS.gene056780.t1 MTR_8g009170 27.036 307 196 10 2 295 57 348 6.90e-22 94.7
MS.gene056780.t1 MTR_2g068840 29.682 283 180 9 9 279 54 329 1.03e-21 94.4
MS.gene056780.t1 MTR_2g437380 30.556 216 132 8 55 262 7 212 1.68e-21 92.0
MS.gene056780.t1 MTR_1g062110 25.714 315 201 8 8 303 64 364 2.32e-21 93.6
MS.gene056780.t1 MTR_5g011250 26.582 316 208 10 6 308 48 352 4.15e-21 92.4
MS.gene056780.t1 MTR_5g055690 30.924 249 136 13 2 233 41 270 9.16e-21 90.1
MS.gene056780.t1 MTR_7g016090 26.056 284 189 8 10 284 41 312 1.03e-20 91.3
MS.gene056780.t1 MTR_7g016090 26.056 284 189 8 10 284 39 310 1.12e-20 91.3
MS.gene056780.t1 MTR_1g032250 26.384 307 187 11 5 293 68 353 3.70e-20 90.1
MS.gene056780.t1 MTR_3g072820 26.552 290 203 6 8 292 40 324 4.92e-20 89.4
MS.gene056780.t1 MTR_2g069210 28.772 285 173 11 24 295 83 350 6.40e-20 89.4
MS.gene056780.t1 MTR_0009s0480 30.705 241 150 10 1 233 37 268 7.97e-20 87.8
MS.gene056780.t1 MTR_7g062560 26.230 305 186 10 10 300 62 341 8.19e-20 89.0
MS.gene056780.t1 MTR_7g105070 28.727 275 162 12 2 260 51 307 1.22e-19 88.6
MS.gene056780.t1 MTR_8g074070 28.713 303 179 12 10 301 52 328 1.80e-19 87.8
MS.gene056780.t1 MTR_8g102600 26.642 274 158 11 56 299 8 268 2.42e-19 86.3
MS.gene056780.t1 MTR_4g093840 27.302 315 183 10 10 300 62 354 5.07e-19 86.7
MS.gene056780.t1 MTR_1g032220 26.667 300 195 11 5 293 68 353 5.08e-19 87.0
MS.gene056780.t1 MTR_8g062600 28.148 270 159 7 6 261 68 316 6.28e-19 86.7
MS.gene056780.t1 MTR_0009s0050 32.620 187 117 6 110 294 53 232 6.28e-19 84.7
MS.gene056780.t1 MTR_0009s0050 32.620 187 117 6 110 294 53 232 6.48e-19 85.1
MS.gene056780.t1 MTR_2g068800 28.287 251 147 6 9 250 54 280 8.04e-19 85.1
MS.gene056780.t1 MTR_2g072910 28.333 240 151 9 8 236 49 278 1.67e-18 84.0
MS.gene056780.t1 MTR_8g041620 26.996 263 174 8 8 261 66 319 1.75e-18 85.5
MS.gene056780.t1 MTR_6g035160 34.752 141 84 3 164 298 32 170 1.81e-18 81.6
MS.gene056780.t1 MTR_2g069060 30.364 247 147 10 4 241 26 256 1.83e-18 83.6
MS.gene056780.t1 MTR_4g132770 33.553 152 93 5 147 295 11 157 2.08e-18 81.3
MS.gene056780.t1 MTR_1g070185 28.617 311 183 11 10 302 69 358 2.47e-18 84.7
MS.gene056780.t1 MTR_3g117485 25.694 288 193 9 10 284 49 328 3.74e-18 84.3
MS.gene056780.t1 MTR_8g041600 27.574 272 161 11 8 261 66 319 4.16e-18 84.3
MS.gene056780.t1 MTR_5g048850 27.711 249 147 12 1 233 38 269 4.91e-18 82.8
MS.gene056780.t1 MTR_2g069300 27.863 262 168 9 10 261 54 304 5.53e-18 83.6
MS.gene056780.t1 MTR_3g026150 28.866 194 113 8 110 293 61 239 5.56e-18 82.4
MS.gene056780.t1 MTR_1g032140 36.029 136 81 4 179 312 231 362 5.74e-18 84.0
MS.gene056780.t1 MTR_1g070110 39.831 118 65 2 182 294 100 216 6.58e-18 81.6
MS.gene056780.t1 MTR_2g025120 25.726 241 148 10 4 233 3 223 7.11e-18 81.3
MS.gene056780.t1 MTR_8g009120 26.846 298 196 10 2 295 57 336 7.88e-18 83.2
MS.gene056780.t1 MTR_3g072810 25.490 306 200 8 8 300 38 328 7.95e-18 82.8
MS.gene056780.t1 MTR_0009s0050 36.752 117 72 2 179 294 35 150 9.08e-18 80.1
MS.gene056780.t1 MTR_4g100600 28.821 229 142 8 8 221 7 229 1.41e-17 80.5
MS.gene056780.t1 MTR_0032s0040 24.667 300 207 10 9 298 69 359 1.99e-17 82.4
MS.gene056780.t1 MTR_3g026150 28.685 251 138 12 3 233 53 282 3.16e-17 80.5
MS.gene056780.t1 MTR_7g056393 28.188 298 201 7 4 295 66 356 3.23e-17 81.6
MS.gene056780.t1 MTR_1g043770 25.974 308 191 9 4 295 52 338 3.33e-17 81.6
MS.gene056780.t1 MTR_7g029655 27.740 292 169 13 10 287 67 330 3.60e-17 81.6
MS.gene056780.t1 MTR_3g040440 47.761 67 34 1 183 249 16 81 3.67e-17 80.1
MS.gene056780.t1 MTR_7g078010 28.939 311 178 11 4 293 66 354 3.69e-17 81.6
MS.gene056780.t1 MTR_8g009180 35.971 139 78 5 168 302 154 285 4.43e-17 80.5
MS.gene056780.t1 MTR_1g048940 24.611 321 212 11 7 312 42 347 4.52e-17 81.3
MS.gene056780.t1 MTR_0009s0400 37.607 117 71 2 179 294 11 126 5.50e-17 77.0
MS.gene056780.t1 MTR_8g469400 32.787 183 111 6 117 293 165 341 1.21e-16 79.7
MS.gene056780.t1 MTR_8g009080 30.290 241 139 10 6 235 95 317 1.54e-16 79.3
MS.gene056780.t1 MTR_0056s0160 33.987 153 92 5 110 260 36 181 2.30e-16 77.4
MS.gene056780.t1 MTR_3g464530 30.544 239 131 10 10 233 34 252 1.65e-15 75.1
MS.gene056780.t1 MTR_1g043760 26.316 266 168 7 6 261 55 302 1.75e-15 76.6
MS.gene056780.t1 MTR_1g027290 25.077 323 191 10 9 302 28 328 2.06e-15 76.3
MS.gene056780.t1 MTR_1g070085 28.804 184 125 4 110 293 65 242 2.12e-15 75.1
MS.gene056780.t1 MTR_8g009170 27.273 242 151 7 2 233 57 283 2.39e-15 75.5
MS.gene056780.t1 MTR_1g070100 29.213 178 120 4 110 287 61 232 3.87e-15 74.3
MS.gene056780.t1 MTR_1g043840 45.570 79 42 1 183 261 108 185 7.71e-15 74.3
MS.gene056780.t1 MTR_8g006930 26.510 298 202 8 4 293 66 354 8.12e-15 74.7
MS.gene056780.t1 MTR_4g100590 26.953 256 160 8 56 296 8 251 8.46e-15 73.6
MS.gene056780.t1 MTR_1g043810 25.758 264 170 8 10 261 54 303 1.07e-14 74.3
MS.gene056780.t1 MTR_3g117485 24.419 258 182 7 33 284 6 256 1.46e-14 73.2
MS.gene056780.t1 MTR_7g056353 32.370 173 105 5 118 284 153 319 2.99e-14 73.6
MS.gene056780.t1 MTR_1g043775 26.296 270 161 9 10 261 54 303 4.35e-14 72.4
MS.gene056780.t1 MTR_7g016080 24.542 273 174 10 10 272 41 291 6.24e-14 71.6
MS.gene056780.t1 MTR_1g070135 25.957 235 151 9 10 233 38 260 2.28e-13 69.7
MS.gene056780.t1 MTR_4g119410 25.753 299 203 7 4 293 66 354 4.73e-13 69.3
MS.gene056780.t1 MTR_8g041600 26.230 244 144 11 8 233 66 291 4.91e-12 65.9
MS.gene056780.t1 MTR_8g009150 30.534 131 74 3 182 295 198 328 1.63e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056780.t1 AT4G23340 54.969 322 133 5 1 314 1 318 1.90e-122 354
MS.gene056780.t1 AT5G51310 51.603 312 134 6 8 306 3 310 9.58e-112 327
MS.gene056780.t1 AT4G23340 59.000 200 75 3 122 314 1 200 3.77e-82 247
MS.gene056780.t1 AT1G80330 31.879 298 183 9 10 296 49 337 2.35e-42 150
MS.gene056780.t1 AT4G25420 32.039 309 190 8 8 302 59 361 1.30e-39 143
MS.gene056780.t1 AT1G52820 29.126 309 204 6 10 309 12 314 6.16e-39 140
MS.gene056780.t1 AT5G51810 30.421 309 195 9 6 302 59 359 9.49e-38 138
MS.gene056780.t1 AT4G21200 34.559 272 153 9 8 269 40 296 1.05e-36 134
MS.gene056780.t1 AT1G55290 33.898 295 172 9 10 294 62 343 1.28e-36 135
MS.gene056780.t1 AT1G15550 29.195 298 195 7 9 299 56 344 4.80e-36 133
MS.gene056780.t1 AT3G19010 29.305 331 194 11 9 314 27 342 1.77e-35 131
MS.gene056780.t1 AT3G19010 29.305 331 194 11 9 314 27 342 1.77e-35 131
MS.gene056780.t1 AT3G13610 32.776 299 172 9 10 295 62 344 2.04e-34 129
MS.gene056780.t1 AT5G07200 29.712 313 196 9 8 302 56 362 1.19e-33 127
MS.gene056780.t1 AT1G60980 31.677 322 187 10 2 302 49 358 1.42e-33 127
MS.gene056780.t1 AT1G44090 31.310 313 186 12 8 301 61 363 1.49e-32 124
MS.gene056780.t1 AT1G50960 31.579 266 158 9 8 262 38 290 4.63e-32 122
MS.gene056780.t1 AT3G21420 31.229 301 176 12 10 292 55 342 6.03e-32 122
MS.gene056780.t1 AT1G52790 31.186 295 186 9 10 295 5 291 1.79e-31 120
MS.gene056780.t1 AT3G19000 28.783 337 198 11 2 314 29 347 2.18e-31 120
MS.gene056780.t1 AT1G30040 26.415 318 210 10 10 313 31 338 5.51e-31 119
MS.gene056780.t1 AT4G21690 32.700 263 158 8 10 260 47 302 6.68e-31 119
MS.gene056780.t1 AT1G80340 29.630 297 193 7 10 299 50 337 7.23e-31 119
MS.gene056780.t1 AT1G78550 30.201 298 181 10 9 292 52 336 7.69e-31 119
MS.gene056780.t1 AT2G34555 28.094 299 185 6 8 292 25 307 1.09e-30 118
MS.gene056780.t1 AT1G52800 27.027 296 198 7 1 287 1 287 1.40e-30 117
MS.gene056780.t1 AT2G38240 28.425 292 196 7 8 292 46 331 2.17e-29 115
MS.gene056780.t1 AT4G03070 28.896 308 200 7 10 306 14 313 3.01e-29 114
MS.gene056780.t1 AT3G55970 29.703 303 186 9 10 295 52 344 2.23e-28 112
MS.gene056780.t1 AT1G78440 27.848 316 199 8 10 307 18 322 3.50e-28 111
MS.gene056780.t1 AT1G80320 29.630 297 195 8 10 298 9 299 8.59e-28 110
MS.gene056780.t1 AT3G19010 27.160 324 180 10 9 314 27 312 1.20e-27 110
MS.gene056780.t1 AT1G17020 30.712 267 160 10 8 260 51 306 2.41e-27 110
MS.gene056780.t1 AT5G08640 28.094 299 206 6 6 300 39 332 2.85e-27 109
MS.gene056780.t1 AT5G08640 28.094 299 206 6 6 300 39 332 2.85e-27 109
MS.gene056780.t1 AT4G25300 29.630 270 167 10 1 260 48 304 4.05e-27 109
MS.gene056780.t1 AT5G05600 27.389 314 198 11 8 303 60 361 1.18e-26 108
MS.gene056780.t1 AT3G11180 27.742 310 198 10 8 303 93 390 1.62e-26 108
MS.gene056780.t1 AT1G47990 27.907 301 189 9 9 294 14 301 6.90e-26 105
MS.gene056780.t1 AT3G11180 27.575 301 193 9 8 295 93 381 7.08e-26 106
MS.gene056780.t1 AT1G05010 29.043 303 189 13 4 295 3 290 8.05e-26 105
MS.gene056780.t1 AT3G46500 27.152 302 199 7 10 296 17 312 9.20e-26 105
MS.gene056780.t1 AT3G51240 27.547 265 178 5 2 260 35 291 9.95e-26 105
MS.gene056780.t1 AT1G77330 27.097 310 188 13 10 300 3 293 1.54e-25 103
MS.gene056780.t1 AT1G52820 29.258 229 149 5 10 231 12 234 2.26e-25 102
MS.gene056780.t1 AT3G50210 28.125 288 161 9 10 261 8 285 3.79e-25 103
MS.gene056780.t1 AT3G50210 28.125 288 161 9 10 261 8 285 3.79e-25 103
MS.gene056780.t1 AT3G50210 28.125 288 161 9 10 261 8 285 3.79e-25 103
MS.gene056780.t1 AT1G62380 25.574 305 188 11 5 295 7 286 1.01e-24 102
MS.gene056780.t1 AT1G30040 27.468 233 150 8 10 233 31 253 1.14e-24 100
MS.gene056780.t1 AT5G58660 29.195 298 165 12 8 273 32 315 1.21e-24 102
MS.gene056780.t1 AT5G63600 26.117 291 200 7 8 293 31 311 1.69e-24 101
MS.gene056780.t1 AT4G10500 28.664 307 174 12 3 288 42 324 1.76e-24 102
MS.gene056780.t1 AT4G25310 31.950 241 139 11 30 260 76 301 2.34e-24 101
MS.gene056780.t1 AT5G63590 29.932 294 196 8 8 296 12 300 2.51e-24 100
MS.gene056780.t1 AT5G63600 25.862 290 201 6 8 293 31 310 3.31e-24 100
MS.gene056780.t1 AT2G36690 27.211 294 180 10 8 284 59 335 4.73e-24 100
MS.gene056780.t1 AT2G36690 27.211 294 180 10 8 284 59 335 4.73e-24 100
MS.gene056780.t1 AT5G43450 30.605 281 158 9 10 276 61 318 5.56e-24 100
MS.gene056780.t1 AT1G06620 29.412 306 184 10 4 295 61 348 6.43e-24 100
MS.gene056780.t1 AT5G51810 29.630 243 151 9 6 236 59 293 7.98e-24 99.4
MS.gene056780.t1 AT3G49620 28.777 278 167 8 10 261 34 306 8.51e-24 100
MS.gene056780.t1 AT5G20400 28.707 317 199 10 1 301 36 341 1.05e-23 99.8
MS.gene056780.t1 AT1G12010 24.272 309 195 11 1 295 3 286 1.56e-23 99.0
MS.gene056780.t1 AT3G49630 28.873 284 159 10 10 261 9 281 1.82e-23 99.0
MS.gene056780.t1 AT1G17010 27.517 298 192 9 9 293 53 339 1.85e-23 99.4
MS.gene056780.t1 AT5G24530 26.936 297 195 8 9 294 37 322 2.14e-23 99.0
MS.gene056780.t1 AT4G10490 26.246 301 200 9 3 294 40 327 2.17e-23 99.0
MS.gene056780.t1 AT1G02400 26.710 307 196 7 4 294 18 311 4.17e-23 97.8
MS.gene056780.t1 AT3G19010 29.200 250 140 10 9 233 27 264 4.69e-23 97.1
MS.gene056780.t1 AT3G49630 29.249 253 151 8 27 261 35 277 5.28e-23 97.4
MS.gene056780.t1 AT4G25420 31.356 236 142 8 8 229 59 288 7.47e-23 96.7
MS.gene056780.t1 AT1G78550 28.839 267 167 9 36 292 5 258 8.31e-23 95.9
MS.gene056780.t1 AT1G28030 27.864 323 213 11 2 312 5 319 1.04e-22 96.7
MS.gene056780.t1 AT3G60290 25.915 328 192 10 8 311 50 350 2.56e-22 95.9
MS.gene056780.t1 AT3G19000 27.170 265 154 10 2 242 29 278 3.07e-22 94.4
MS.gene056780.t1 AT5G59530 28.333 300 188 11 6 292 59 344 3.41e-22 95.9
MS.gene056780.t1 AT5G43440 28.814 295 187 10 10 292 62 345 3.48e-22 95.9
MS.gene056780.t1 AT3G46500 27.068 266 173 7 10 260 17 276 4.21e-22 94.4
MS.gene056780.t1 AT3G12900 27.174 276 178 8 27 293 76 337 5.81e-22 95.1
MS.gene056780.t1 AT3G47190 26.861 309 171 12 8 292 30 307 7.31e-22 94.4
MS.gene056780.t1 AT1G03400 28.958 259 167 9 7 261 53 298 9.35e-22 94.4
MS.gene056780.t1 AT1G35190 26.791 321 183 8 10 296 12 314 1.39e-21 93.6
MS.gene056780.t1 AT5G20550 29.097 299 190 10 1 286 36 325 1.45e-21 94.0
MS.gene056780.t1 AT5G54000 29.682 283 190 7 24 303 65 341 2.00e-21 93.6
MS.gene056780.t1 AT1G04380 28.136 295 190 10 10 294 45 327 4.59e-21 92.4
MS.gene056780.t1 AT2G44800 26.603 312 206 10 10 311 52 350 5.20e-21 92.4
MS.gene056780.t1 AT1G14130 27.273 286 188 7 8 287 7 278 7.36e-21 91.3
MS.gene056780.t1 AT5G12270 28.146 302 186 10 10 295 56 342 9.03e-21 91.7
MS.gene056780.t1 AT5G07480 27.044 318 207 9 2 304 41 348 1.02e-20 91.7
MS.gene056780.t1 AT1G03410 27.925 265 170 8 4 260 56 307 1.27e-20 91.3
MS.gene056780.t1 AT1G03410 27.925 265 170 8 4 260 93 344 1.62e-20 91.3
MS.gene056780.t1 AT2G30840 26.899 316 213 9 6 314 58 362 6.39e-20 89.4
MS.gene056780.t1 AT2G19590 25.641 312 203 11 8 307 9 303 6.67e-20 88.6
MS.gene056780.t1 AT1G35190 26.168 321 162 10 10 296 12 291 7.20e-20 88.6
MS.gene056780.t1 AT5G58660 28.906 256 137 11 8 232 32 273 7.95e-20 87.8
MS.gene056780.t1 AT5G59540 27.609 297 199 9 6 295 62 349 8.15e-20 89.0
MS.gene056780.t1 AT3G61400 26.449 276 192 6 22 292 82 351 8.96e-20 89.0
MS.gene056780.t1 AT3G46490 25.305 328 179 10 10 296 17 319 2.92e-19 87.0
MS.gene056780.t1 AT3G55970 29.461 241 143 9 10 233 52 282 3.19e-19 86.7
MS.gene056780.t1 AT1G04350 27.778 270 179 7 1 261 44 306 3.39e-19 87.4
MS.gene056780.t1 AT2G30830 35.714 168 99 5 120 284 169 330 3.70e-19 87.0
MS.gene056780.t1 AT1G14120 26.531 294 194 8 10 296 8 286 7.25e-19 85.9
MS.gene056780.t1 AT1G14120 26.531 294 194 8 10 296 8 286 7.25e-19 85.9
MS.gene056780.t1 AT1G14120 26.531 294 194 8 10 296 8 286 7.25e-19 85.9
MS.gene056780.t1 AT5G63595 27.165 254 151 7 9 256 24 249 1.49e-18 84.3
MS.gene056780.t1 AT1G49390 27.397 292 199 7 1 284 36 322 1.58e-18 85.1
MS.gene056780.t1 AT1G06650 25.333 300 206 10 4 295 63 352 4.47e-18 84.3
MS.gene056780.t1 AT1G15540 25.914 301 203 9 9 297 15 307 7.26e-18 83.2
MS.gene056780.t1 AT1G15540 25.914 301 203 9 9 297 8 300 7.65e-18 82.8
MS.gene056780.t1 AT1G15540 25.914 301 203 9 9 297 8 300 7.65e-18 82.8
MS.gene056780.t1 AT1G15540 25.914 301 203 9 9 297 11 303 7.67e-18 82.8
MS.gene056780.t1 AT5G54000 29.588 267 179 7 40 303 1 261 8.62e-18 82.0
MS.gene056780.t1 AT5G43450 29.832 238 135 8 10 233 61 280 9.00e-18 82.4
MS.gene056780.t1 AT4G22880 26.335 281 181 9 6 272 48 316 1.02e-17 83.2
MS.gene056780.t1 AT4G22880 26.335 281 181 9 6 272 48 316 1.02e-17 83.2
MS.gene056780.t1 AT4G22880 26.335 281 181 9 6 272 48 316 1.02e-17 83.2
MS.gene056780.t1 AT3G46490 25.685 292 151 10 10 260 17 283 1.57e-17 82.0
MS.gene056780.t1 AT5G43935 23.490 298 181 7 10 293 19 283 2.62e-17 80.9
MS.gene056780.t1 AT4G25310 28.151 238 124 10 30 260 76 273 4.46e-17 80.9
MS.gene056780.t1 AT1G03400 25.784 287 168 10 7 261 53 326 9.13e-17 80.5
MS.gene056780.t1 AT4G16770 28.384 229 145 7 8 221 20 244 1.10e-16 78.6
MS.gene056780.t1 AT1G06640 24.771 327 210 10 4 314 63 369 1.17e-16 80.1
MS.gene056780.t1 AT4G03050 37.719 114 70 1 183 295 275 388 1.36e-16 80.1
MS.gene056780.t1 AT4G03050 37.719 114 70 1 183 295 275 388 1.36e-16 80.1
MS.gene056780.t1 AT4G25300 34.459 148 83 6 118 260 72 210 1.71e-16 78.2
MS.gene056780.t1 AT1G06645 25.253 297 207 9 4 295 76 362 1.85e-16 79.7
MS.gene056780.t1 AT3G51240 31.788 151 94 3 116 260 60 207 5.53e-16 77.0
MS.gene056780.t1 AT5G43440 29.114 237 148 9 10 237 62 287 6.28e-16 77.0
MS.gene056780.t1 AT1G06620 29.876 241 140 9 4 233 61 283 8.23e-16 76.6
MS.gene056780.t1 AT4G16765 25.926 216 143 6 88 296 34 239 1.78e-15 75.1
MS.gene056780.t1 AT4G16765 25.926 216 143 6 88 296 34 239 1.78e-15 75.1
MS.gene056780.t1 AT4G16765 25.926 216 143 6 88 296 34 239 1.78e-15 75.1
MS.gene056780.t1 AT1G02400 25.403 248 157 6 4 236 18 252 2.15e-15 75.1
MS.gene056780.t1 AT3G46500 25.592 211 142 4 98 296 31 238 3.11e-15 74.3
MS.gene056780.t1 AT3G46500 25.592 211 142 4 98 296 31 238 3.11e-15 74.3
MS.gene056780.t1 AT5G05600 25.926 243 151 10 8 233 60 290 3.46e-15 75.1
MS.gene056780.t1 AT5G63580 28.634 227 154 4 10 233 19 240 3.73e-15 74.3
MS.gene056780.t1 AT4G16765 28.333 180 112 6 88 260 34 203 4.29e-15 73.9
MS.gene056780.t1 AT3G50210 32.450 151 93 4 116 261 57 203 6.97e-15 73.6
MS.gene056780.t1 AT2G30840 28.017 232 154 6 6 233 58 280 1.13e-14 73.6
MS.gene056780.t1 AT5G07480 29.557 203 130 6 110 304 42 239 1.40e-14 72.4
MS.gene056780.t1 AT5G63580 28.444 225 153 4 10 231 19 238 1.42e-14 72.4
MS.gene056780.t1 AT3G61400 26.291 213 150 4 22 233 82 288 1.77e-14 72.8
MS.gene056780.t1 AT1G04380 28.755 233 147 8 10 235 45 265 8.37e-14 70.9
MS.gene056780.t1 AT3G49630 31.579 152 88 4 116 261 67 208 8.57e-14 70.5
MS.gene056780.t1 AT3G46500 28.261 184 118 5 117 296 3 176 2.38e-13 67.8
MS.gene056780.t1 AT1G49390 27.823 248 171 6 40 284 1 243 2.88e-13 69.3
MS.gene056780.t1 AT2G25450 24.903 257 185 5 6 261 56 305 3.32e-13 69.7
MS.gene056780.t1 AT4G16765 29.688 128 85 2 173 296 67 193 1.28e-12 66.2
MS.gene056780.t1 AT5G59540 27.155 232 156 8 6 233 62 284 1.42e-12 67.4
MS.gene056780.t1 AT3G46500 25.143 175 116 4 98 260 31 202 1.77e-11 63.2
MS.gene056780.t1 AT3G46480 30.508 118 77 2 183 296 156 272 4.39e-11 63.2

Find 45 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATACATCACCAGAAATTT+TGG 0.124458 8.4:+66299871 MS.gene056780:CDS
TCTTCCAAATCCAAAATTTC+TGG 0.144775 8.4:-66299881 None:intergenic
TGAGGATGAGAAAGTGATTT+TGG 0.209683 8.4:+66300156 MS.gene056780:CDS
AGATATCATGATTAATTATA+TGG 0.245651 8.4:-66298626 None:intergenic
TTTGAAAGCCTTAGAGTTGA+TGG 0.255420 8.4:+66298780 MS.gene056780:CDS
TGAAAACACATGAAGGAAAA+TGG 0.283049 8.4:+66299984 MS.gene056780:CDS
TTTCTAAAGCATGCAAAGAT+TGG 0.316745 8.4:+66298595 MS.gene056780:CDS
ATCTTATACCAAGATGAAAT+TGG 0.327780 8.4:+66299950 MS.gene056780:CDS
GGTTCAGAAATGTCTATAAT+AGG 0.339282 8.4:-66298546 None:intergenic
CCATCTCCAACAACTTCATT+TGG 0.346444 8.4:-66300181 None:intergenic
GAAAGAGTGGTTAAAGAAGA+TGG 0.349563 8.4:-66298576 None:intergenic
TTCTAAAGCATGCAAAGATT+GGG 0.355396 8.4:+66298596 MS.gene056780:CDS
ATCAACATAAGGATATGAAT+TGG 0.397199 8.4:-66298520 None:intergenic
AGTTAGGTCCATCAACTCTA+AGG 0.397448 8.4:-66298788 None:intergenic
TTAGCAGAAACATAGAAGTT+AGG 0.432260 8.4:-66298804 None:intergenic
GAAGTCCTCCAATTTCATCT+TGG 0.437867 8.4:-66299958 None:intergenic
ACTCTAAGGCTTTCAAAGAA+TGG 0.440138 8.4:-66298774 None:intergenic
GAGAGAATAATCAAAGAGGA+AGG 0.444473 8.4:+66300254 MS.gene056780:CDS
GAAGATCAAGTTGAAGGACT+TGG 0.452714 8.4:+66299899 MS.gene056780:CDS
GGGTCATTAGTGGTAAATAT+AGG 0.454743 8.4:+66300028 MS.gene056780:CDS
TTGGCACCAAATGAAGTTGT+TGG 0.459765 8.4:+66300175 MS.gene056780:CDS
AAGCTTGTATTAATGAGCTT+AGG 0.476641 8.4:+66299779 MS.gene056780:CDS
TCCTTCTGAAGGGTCATTAG+TGG 0.488539 8.4:+66300018 MS.gene056780:CDS
AAATAATCTGAACACACAAA+AGG 0.494776 8.4:-66300223 None:intergenic
GATTTGGAAGATCAAGTTGA+AGG 0.498662 8.4:+66299893 MS.gene056780:CDS
TCAAAGAGGAAGGTTTGAAA+AGG 0.502768 8.4:+66300264 MS.gene056780:CDS
CTTGGAGTAATGATAAGTTA+AGG 0.502992 8.4:+66300065 MS.gene056780:CDS
CCAAATGAAGTTGTTGGAGA+TGG 0.511109 8.4:+66300181 MS.gene056780:CDS
ATAATAGGAAGATCAACATA+AGG 0.531318 8.4:-66298531 None:intergenic
TTTGCATGCTTTAGAAAGAG+TGG 0.550960 8.4:-66298589 None:intergenic
TTTAGAGAGAATAATCAAAG+AGG 0.551669 8.4:+66300250 MS.gene056780:CDS
TCTAAAGCATGCAAAGATTG+GGG 0.552225 8.4:+66298597 MS.gene056780:CDS
TAGGTGATATGATGCAAGCT+TGG 0.553937 8.4:+66300047 MS.gene056780:CDS
TCTGATACTAAACTTAAACT+TGG 0.555324 8.4:+66298705 MS.gene056780:CDS
AGTTTAAGTTTAGTATCAGA+AGG 0.561095 8.4:-66298702 None:intergenic
CTTCAAGTGAAAACACATGA+AGG 0.568959 8.4:+66299977 MS.gene056780:CDS
ACCACTAATGACCCTTCAGA+AGG 0.570837 8.4:-66300019 None:intergenic
TTATACCAAGATGAAATTGG+AGG 0.581682 8.4:+66299953 MS.gene056780:CDS
ATTTAGATAATAAATGAAGC+TGG 0.585134 8.4:-66298665 None:intergenic
AGAGAGTTATTGTAGCAAGA+TGG 0.586419 8.4:+66299733 MS.gene056780:CDS
TTGTTGGAGATGGAAATAAG+AGG 0.590013 8.4:+66300191 MS.gene056780:CDS
AATGGAGAAGCAATGAAATG+AGG 0.591887 8.4:-66298756 None:intergenic
GTATTAATGAGCTTAGGAGA+AGG 0.592659 8.4:+66299785 MS.gene056780:CDS
ATTGATATAAGTCCTTCTGA+AGG 0.616593 8.4:+66300007 MS.gene056780:CDS
TTGATATAAGTCCTTCTGAA+GGG 0.631337 8.4:+66300008 MS.gene056780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTATTTGTGTTTATATAT+TGG + chr8.4:66298971-66298990 MS.gene056780:intron 15.0%
!! AGATATCATGATTAATTATA+TGG - chr8.4:66298629-66298648 None:intergenic 15.0%
!! AAAAACAGAATTCTAAATTC+AGG + chr8.4:66298850-66298869 MS.gene056780:CDS 20.0%
!! ATTAAAAGGACTAATGTAAA+AGG - chr8.4:66298898-66298917 None:intergenic 20.0%
!! ATTTAGATAATAAATGAAGC+TGG - chr8.4:66298668-66298687 None:intergenic 20.0%
!! GAAAAACAGTTATGATTAAA+AGG - chr8.4:66298912-66298931 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG - chr8.4:66298732-66298751 None:intergenic 20.0%
! AAATAATCTGAACACACAAA+AGG - chr8.4:66300226-66300245 None:intergenic 25.0%
! ATAATAGGAAGATCAACATA+AGG - chr8.4:66298534-66298553 None:intergenic 25.0%
! ATCAACATAAGGATATGAAT+TGG - chr8.4:66298523-66298542 None:intergenic 25.0%
! ATCTTATACCAAGATGAAAT+TGG + chr8.4:66299950-66299969 MS.gene056780:CDS 25.0%
! TCAGAATTCAAAAAATGTCA+AGG + chr8.4:66299830-66299849 MS.gene056780:CDS 25.0%
! TCTGATACTAAACTTAAACT+TGG + chr8.4:66298705-66298724 MS.gene056780:CDS 25.0%
! TTTAGAGAGAATAATCAAAG+AGG + chr8.4:66300250-66300269 MS.gene056780:CDS 25.0%
!! AGTTTAAGTTTAGTATCAGA+AGG - chr8.4:66298705-66298724 None:intergenic 25.0%
!!! GTTAAAGAAGATGGTTTTAA+TGG - chr8.4:66298570-66298589 None:intergenic 25.0%
AAAAAGAACTAGAGTGTGTT+TGG - chr8.4:66299645-66299664 None:intergenic 30.0%
AAGCTTGTATTAATGAGCTT+AGG + chr8.4:66299779-66299798 MS.gene056780:CDS 30.0%
ATTATGTCCATAAGCTTTCT+GGG + chr8.4:66299153-66299172 MS.gene056780:intron 30.0%
ATTGATATAAGTCCTTCTGA+AGG + chr8.4:66300007-66300026 MS.gene056780:CDS 30.0%
CTTGGAGTAATGATAAGTTA+AGG + chr8.4:66300065-66300084 MS.gene056780:CDS 30.0%
GGTTCAGAAATGTCTATAAT+AGG - chr8.4:66298549-66298568 None:intergenic 30.0%
TATGGAGACAAACATATGTT+TGG + chr8.4:66299031-66299050 MS.gene056780:intron 30.0%
TCTTCCAAATCCAAAATTTC+TGG - chr8.4:66299884-66299903 None:intergenic 30.0%
TGAAAACACATGAAGGAAAA+TGG + chr8.4:66299984-66300003 MS.gene056780:CDS 30.0%
TTAGCAGAAACATAGAAGTT+AGG - chr8.4:66298807-66298826 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG + chr8.4:66299953-66299972 MS.gene056780:CDS 30.0%
TTGATATAAGTCCTTCTGAA+GGG + chr8.4:66300008-66300027 MS.gene056780:CDS 30.0%
! ATCACCAGAAATTTTGGATT+TGG + chr8.4:66299877-66299896 MS.gene056780:CDS 30.0%
! ATCTGTGGATAGATTTTCTT+TGG + chr8.4:66300117-66300136 MS.gene056780:CDS 30.0%
! CTATACATCACCAGAAATTT+TGG + chr8.4:66299871-66299890 MS.gene056780:CDS 30.0%
! TATACAGTTAGAGATTTTGC+TGG + chr8.4:66300292-66300311 MS.gene056780:intron 30.0%
!! TTCTAAAGCATGCAAAGATT+GGG + chr8.4:66298596-66298615 MS.gene056780:CDS 30.0%
!! TTTCTAAAGCATGCAAAGAT+TGG + chr8.4:66298595-66298614 MS.gene056780:CDS 30.0%
!!! AGTTGTTTTGAAAGAATCTG+TGG + chr8.4:66300102-66300121 MS.gene056780:CDS 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG + chr8.4:66300128-66300147 MS.gene056780:CDS 30.0%
AATGGAGAAGCAATGAAATG+AGG - chr8.4:66298759-66298778 None:intergenic 35.0%
AGACTGCTTCAAAGAGTTTA+TGG + chr8.4:66299095-66299114 MS.gene056780:intron 35.0%
AGAGAGTTATTGTAGCAAGA+TGG + chr8.4:66299733-66299752 MS.gene056780:CDS 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG + chr8.4:66298944-66298963 MS.gene056780:intron 35.0%
CTTCAAGTGAAAACACATGA+AGG + chr8.4:66299977-66299996 MS.gene056780:CDS 35.0%
GAAAGAGTGGTTAAAGAAGA+TGG - chr8.4:66298579-66298598 None:intergenic 35.0%
GAGAGAATAATCAAAGAGGA+AGG + chr8.4:66300254-66300273 MS.gene056780:CDS 35.0%
GATTATGTCCATAAGCTTTC+TGG + chr8.4:66299152-66299171 MS.gene056780:intron 35.0%
GGGTCATTAGTGGTAAATAT+AGG + chr8.4:66300028-66300047 MS.gene056780:CDS 35.0%
GTATTAATGAGCTTAGGAGA+AGG + chr8.4:66299785-66299804 MS.gene056780:CDS 35.0%
TCAAAGAGGAAGGTTTGAAA+AGG + chr8.4:66300264-66300283 MS.gene056780:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG + chr8.4:66300191-66300210 MS.gene056780:CDS 35.0%
TTTGAAAGCCTTAGAGTTGA+TGG + chr8.4:66298780-66298799 MS.gene056780:CDS 35.0%
! TCTAAAGCATGCAAAGATTG+GGG + chr8.4:66298597-66298616 MS.gene056780:CDS 35.0%
! TGAGGATGAGAAAGTGATTT+TGG + chr8.4:66300156-66300175 MS.gene056780:CDS 35.0%
!! ACTCTAAGGCTTTCAAAGAA+TGG - chr8.4:66298777-66298796 None:intergenic 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG + chr8.4:66299893-66299912 MS.gene056780:CDS 35.0%
!! TAAACTCTTTGAAGCAGTCT+CGG - chr8.4:66299095-66299114 None:intergenic 35.0%
!! TTTGCATGCTTTAGAAAGAG+TGG - chr8.4:66298592-66298611 None:intergenic 35.0%
AAGCTATCCCAGAAAGCTTA+TGG - chr8.4:66299163-66299182 None:intergenic 40.0%
AGAGGAAGGTTTGAAAAGGT+TGG + chr8.4:66300268-66300287 MS.gene056780:intron 40.0%
AGTTAGGTCCATCAACTCTA+AGG - chr8.4:66298791-66298810 None:intergenic 40.0%
CCAAATGAAGTTGTTGGAGA+TGG + chr8.4:66300181-66300200 MS.gene056780:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG - chr8.4:66300184-66300203 None:intergenic 40.0%
GAAGTCCTCCAATTTCATCT+TGG - chr8.4:66299961-66299980 None:intergenic 40.0%
TAGGTGATATGATGCAAGCT+TGG + chr8.4:66300047-66300066 MS.gene056780:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG + chr8.4:66300175-66300194 MS.gene056780:CDS 40.0%
!! ACTCGAGTTGAGAGAGTTTA+TGG + chr8.4:66299013-66299032 MS.gene056780:intron 40.0%
!! GAAGATCAAGTTGAAGGACT+TGG + chr8.4:66299899-66299918 MS.gene056780:CDS 40.0%
!!! GGCTTTCTTTTGGTGTTTTG+AGG + chr8.4:66300138-66300157 MS.gene056780:CDS 40.0%
ACCACTAATGACCCTTCAGA+AGG - chr8.4:66300022-66300041 None:intergenic 45.0%
CTTATGAACATGCTCCAAGC+TGG - chr8.4:66299481-66299500 None:intergenic 45.0%
TTATCCAAACAGCACCAGCT+TGG + chr8.4:66299464-66299483 MS.gene056780:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG + chr8.4:66300018-66300037 MS.gene056780:CDS 45.0%
!! TGCTCCAAGCTGGTGCTGTT+TGG - chr8.4:66299471-66299490 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 66298516 66300452 66298516 ID=MS.gene056780
chr8.4 mRNA 66298516 66300452 66298516 ID=MS.gene056780.t1;Parent=MS.gene056780
chr8.4 exon 66298516 66298871 66298516 ID=MS.gene056780.t1.exon1;Parent=MS.gene056780.t1
chr8.4 CDS 66298516 66298871 66298516 ID=cds.MS.gene056780.t1;Parent=MS.gene056780.t1
chr8.4 exon 66299724 66300285 66299724 ID=MS.gene056780.t1.exon2;Parent=MS.gene056780.t1
chr8.4 CDS 66299724 66300285 66299724 ID=cds.MS.gene056780.t1;Parent=MS.gene056780.t1
chr8.4 exon 66300426 66300452 66300426 ID=MS.gene056780.t1.exon3;Parent=MS.gene056780.t1
chr8.4 CDS 66300426 66300452 66300426 ID=cds.MS.gene056780.t1;Parent=MS.gene056780.t1
Gene Sequence

>MS.gene056780

ATGTCCAATTCATATCCTTATGTTGATCTTCCTATTATAGACATTTCTGAACCATTAAAACCATCTTCTTTAACCACTCTTTCTAAAGCATGCAAAGATTGGGGATTTTTCCATATAATTAATCATGATATCTCTAAAGATCTTTGTAGCCAGCTTCATTTATTATCTAAATACATATTTAATCTTCCTTCTGATACTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTACACACCTCATTTCATTGCTTCTCCATTCTTTGAAAGCCTTAGAGTTGATGGACCTAACTTCTATGTTTCTGCTAAGAGTTCTGAAGATGTTTTGTTTGAAAAACAGAATTCTAAATTCAGGTAATGTTTAAGAATTTTGTTGTCCTTTTACATTAGTCCTTTTAATCATAACTGTTTTTCTATTTCATATGTCTTAGAGCTTAGAGTTTGTATGGAATGACTTATTTGTGTTTATATATTGGCATACGAACTTGTGAGACTACTCGAGTTGAGAGAGTTTATGGAGACAAACATATGTTTGGATTGACTTATTTGAATTTATCTGCTGACATAAGTACTTCCGAGACTGCTTCAAAGAGTTTATGGAAACAACTTATAATATGTGTATAAACTGTTTTTAGATTATGTCCATAAGCTTTCTGGGATAGCTTATGAAAATAGCTTATATAAAACAGTTTGATTTTTTTTTTATATAGAAATAGCTTATACATGAGCACTTATATAATAAGAGCTTATGCTATAAGTACTTAATTAAGTTGCTCATAAGCTGCTTTCAGCTTATTTTCATAAGCTCTTCAAGATAGCTTATGAAAATAGTTTATATGAAATTTTTTTGACTTTATTTTATCTCTTGTTATGAAAATAACTTATACAAAAACACTTATATGATAGACACTTATAAGATGTTCATAAGCACTTATGATTAAGTTGTTTATCCAAACAGCACCAGCTTGGAGCATGTTCATAAGCTTTTCATAGCTTATTTTCACAAGCTCTTCAAGATAGTGTATGAAAATAGTTCATATAAAAAAAAAGTTTGACTTTATGTTTTGTTGTGAAAATAACATGAAAAAGCACTTATTCTATAAGTACTTAATTAAGCTGTTTATCCAAACACACTCTAGTTCTTTTTAAGCTTTTGTTTAATAAAAAAATGCATAATTTATTTCTCTTCTTATATATTTTCAACAGTGAGACACTAGAGAGTTATTGTAGCAAGATGGCAGATTTATCAGAAAGAATTTTAAAGCTTGTATTAATGAGCTTAGGAGAAGGATTTGAGAAGCTATTTTATGATTCAGAATTCAAAAAATGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAAATTTTGGATTTGGAAGATCAAGTTGAAGGACTTGGAATGCACACTGACATGAGCTGCATTACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTGAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCATTAGTGGTAAATATAGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTAAGGTCTTCTGAACATAGAGTTGTTTTGAAAGAATCTGTGGATAGATTTTCTTTGGCTTTCTTTTGGTGTTTTGAGGATGAGAAAGTGATTTTGGCACCAAATGAAGTTGTTGGAGATGGAAATAAGAGGATGTATGATCCTTTTGTGTGTTCAGATTATTTGAAGTTTAGAGAGAATAATCAAAGAGGAAGGTTTGAAAAGGTTGGTTATACAGTTAGAGATTTTGCTGGAATTAAGTCTCAAATTATGTAAATTCATCATAGAATATTTAATAATTTGTGCTTGCTTTGATTTACATTTATAGTGATGTAAGTTGTGAAAATAGTATATATAATATACAGAAAGACTTTGTTGATTTTCAAATGTAA
Protein sequence

>MS.gene056780.t1

MSNSYPYVDLPIIDISEPLKPSSLTTLSKACKDWGFFHIINHDISKDLCSQLHLLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSETLESYCSKMADLSERILKLVLMSLGEGFEKLFYDSEFKKCQGYLRINNYTSPEILDLEDQVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKESVDRFSLAFFWCFEDEKVILAPNEVVGDGNKRMYDPFVCSDYLKFRENNQRGRFEKKDFVDFQM