Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057185.t1 | XP_003602296.2 | 98.5 | 974 | 14 | 1 | 33 | 1005 | 58 | 1031 | 0.00E+00 | 1916.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057185.t1 | Q9FIN7 | 51.6 | 1015 | 452 | 11 | 4 | 1005 | 34 | 1022 | 7.1e-301 | 1034.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057185.t1 | G7J7I6 | 98.5 | 974 | 14 | 1 | 33 | 1005 | 58 | 1031 | 0.0e+00 | 1916.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052994 | MS.gene057185 | 0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene057185 | MS.gene057186 | 0.913117 | 8.92E-84 | -1.69E-46 |
| MS.gene057185 | MS.gene06880 | 0.87157 | 6.18E-67 | -1.69E-46 |
| MS.gene057185 | MS.gene24205 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene057185 | MS.gene27287 | 0.818047 | 2.40E-52 | -1.69E-46 |
| MS.gene057185 | MS.gene51029 | 0.810528 | 1.10E-50 | -1.69E-46 |
| MS.gene057185 | MS.gene54037 | 0.825414 | 4.75E-54 | -1.69E-46 |
| MS.gene057185 | MS.gene67017 | 0.801626 | 8.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057185.t1 | MTR_3g091940 | 98.410 | 1006 | 15 | 1 | 1 | 1005 | 26 | 1031 | 0.0 | 2048 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057185.t1 | AT5G24350 | 51.476 | 1016 | 452 | 13 | 4 | 1005 | 34 | 1022 | 0.0 | 1048 |
| MS.gene057185.t1 | AT5G24350 | 51.476 | 1016 | 452 | 13 | 4 | 1005 | 34 | 1022 | 0.0 | 1048 |
| MS.gene057185.t1 | AT5G24350 | 50.193 | 1036 | 455 | 14 | 4 | 1005 | 34 | 1042 | 0.0 | 1031 |
Find 195 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCTCTCCCAAGACAAAT+TGG | 0.188436 | 3.1:-73939674 | None:intergenic |
| AATAGCTTTGCAGAATAAAT+TGG | 0.221949 | 3.1:+73942360 | MS.gene057185:CDS |
| TTTCACAGGGTGTCCTTAAT+TGG | 0.231775 | 3.1:+73942274 | MS.gene057185:CDS |
| ATTTGGATAGGAACTGTTTC+TGG | 0.232942 | 3.1:-73941746 | None:intergenic |
| ATCAGTAAACCATACATTTC+AGG | 0.249512 | 3.1:-73940074 | None:intergenic |
| TTAAACAATTTCACCTTTCT+AGG | 0.250369 | 3.1:+73940012 | MS.gene057185:CDS |
| TTGAGGAAGCTTAGATAATA+TGG | 0.278880 | 3.1:-73942524 | None:intergenic |
| TTTGAATGTGTTCATAGAAT+TGG | 0.285239 | 3.1:+73940251 | MS.gene057185:CDS |
| GTGACGGCTTTGCTGGCTTA+TGG | 0.289149 | 3.1:+73940290 | MS.gene057185:CDS |
| GATCTTGCCATGTTTCTCTT+TGG | 0.295881 | 3.1:+73939454 | MS.gene057185:CDS |
| GCTACAGCAGCTTCGTTAAT+AGG | 0.297401 | 3.1:-73941626 | None:intergenic |
| AGCTGACCTTTATAACCTTT+TGG | 0.299752 | 3.1:-73939543 | None:intergenic |
| GTGATGATTCTAGTGAAGTA+TGG | 0.305485 | 3.1:+73940354 | MS.gene057185:CDS |
| AAAATTTAAATTTATGCTTA+AGG | 0.309359 | 3.1:+73942186 | MS.gene057185:CDS |
| ATGTTGATAGACATTCTAAA+TGG | 0.315192 | 3.1:+73939816 | MS.gene057185:CDS |
| GGGTACAAGTTCTGTTTCTT+TGG | 0.316297 | 3.1:+73944648 | MS.gene057185:CDS |
| ATGGGTGACTTCTCCAATTA+AGG | 0.316943 | 3.1:-73942287 | None:intergenic |
| AAAATATCTGCGCCTATTGT+AGG | 0.318309 | 3.1:+73937862 | MS.gene057185:CDS |
| AGATGCTGTGACGGCTTTGC+TGG | 0.320928 | 3.1:+73940283 | MS.gene057185:CDS |
| AAATGTATGGTTTACTGATT+AGG | 0.323352 | 3.1:+73940078 | MS.gene057185:CDS |
| CTTGCAGAAAGTGGGAAAAT+TGG | 0.326443 | 3.1:+73941650 | MS.gene057185:CDS |
| CATTGAAGCAGGGAGACTTT+TGG | 0.329978 | 3.1:+73944105 | MS.gene057185:CDS |
| ATGTATGGGCAGCTTCTTCC+TGG | 0.331843 | 3.1:+73941767 | MS.gene057185:CDS |
| TCTAAATGGTTCAAAGGTTC+AGG | 0.336367 | 3.1:+73939830 | MS.gene057185:CDS |
| ATTGCAACTCTGGATTTAAC+AGG | 0.336706 | 3.1:+73939606 | MS.gene057185:CDS |
| TCCGAAGATGATGAAATTCT+TGG | 0.337755 | 3.1:+73937760 | MS.gene057185:CDS |
| ACAAAGGGAGACAAAGAATA+TGG | 0.338245 | 3.1:-73941701 | None:intergenic |
| TGAGCTCTCAAAATGGTATA+TGG | 0.340782 | 3.1:+73941955 | MS.gene057185:CDS |
| GACAGGCTGGAAACATTTCT+TGG | 0.344394 | 3.1:+73940416 | MS.gene057185:CDS |
| AAATTTAAATTTATGCTTAA+GGG | 0.348375 | 3.1:+73942187 | MS.gene057185:CDS |
| TTCACCTTTCTAGGTTGCTC+TGG | 0.354557 | 3.1:+73940021 | MS.gene057185:CDS |
| TTAAAACCAAAAGGTTATAA+AGG | 0.365254 | 3.1:+73939537 | MS.gene057185:CDS |
| TACACTCTCCCAATTTGTCT+TGG | 0.371687 | 3.1:+73939665 | MS.gene057185:CDS |
| GAAGAAGCTGCCCATACATT+TGG | 0.372186 | 3.1:-73941763 | None:intergenic |
| CAACAAATTGAGATCAGTTA+TGG | 0.375159 | 3.1:+73938263 | MS.gene057185:CDS |
| GAATAAATTTAGAAAGAATA+AGG | 0.375640 | 3.1:-73944459 | None:intergenic |
| TGCTGTGAGGCAAGATGATT+GGG | 0.376762 | 3.1:+73941811 | MS.gene057185:CDS |
| CCTAACTCACCATGCATTTG+AGG | 0.378156 | 3.1:-73942541 | None:intergenic |
| TCCTCTGACAATGCAAAATC+AGG | 0.381642 | 3.1:-73939954 | None:intergenic |
| TTCTGTGCTCTTCCCAGAGC+AGG | 0.382408 | 3.1:-73939876 | None:intergenic |
| CAATCGATGAGCTCTCAAAA+TGG | 0.382725 | 3.1:+73941948 | MS.gene057185:CDS |
| ATATTGCAAAATTTGAAGTC+TGG | 0.386094 | 3.1:-73940390 | None:intergenic |
| CCCAATTTGTCTTGGGAGAG+AGG | 0.386776 | 3.1:+73939673 | MS.gene057185:CDS |
| TATCTACAATTGCAATGATA+TGG | 0.386989 | 3.1:-73939779 | None:intergenic |
| TCGTGTGAACAGCTGCAAAA+AGG | 0.392394 | 3.1:-73938376 | None:intergenic |
| TTTGAGAGCTCATCGATTGA+TGG | 0.392826 | 3.1:-73941944 | None:intergenic |
| TGACTTGAATTTGAATATCA+TGG | 0.396761 | 3.1:-73941880 | None:intergenic |
| ACAGTTCCTATCCAAATGTA+TGG | 0.397947 | 3.1:+73941752 | MS.gene057185:CDS |
| TGCAGAGGATTGCTTAAAGC+TGG | 0.399248 | 3.1:+73944595 | MS.gene057185:CDS |
| GTATTCTCTTTGCAGTTTGA+GGG | 0.404063 | 3.1:+73939507 | MS.gene057185:CDS |
| CAGATTGGATTGTTGAAGAC+AGG | 0.404118 | 3.1:+73939988 | MS.gene057185:CDS |
| CCATTCTATAAATCAAAATC+TGG | 0.404432 | 3.1:+73942306 | MS.gene057185:CDS |
| CTTTCTCTTCTCTCACTTCG+AGG | 0.405408 | 3.1:+73937354 | MS.gene057185:CDS |
| GGTATTCTCTTTGCAGTTTG+AGG | 0.408006 | 3.1:+73939506 | MS.gene057185:CDS |
| TTGCTGTGAGGCAAGATGAT+TGG | 0.409982 | 3.1:+73941810 | MS.gene057185:CDS |
| TCCAAGAATTTCATCATCTT+CGG | 0.412965 | 3.1:-73937761 | None:intergenic |
| TGTGGCGAGATTAGTAGCTT+TGG | 0.413219 | 3.1:-73939573 | None:intergenic |
| ACACTCTCCCAATTTGTCTT+GGG | 0.414408 | 3.1:+73939666 | MS.gene057185:CDS |
| GCAGCTGTTCACACGAAGTC+TGG | 0.417595 | 3.1:+73938383 | MS.gene057185:CDS |
| GTACATTTAGTGTGGGAGAT+TGG | 0.418918 | 3.1:+73937737 | MS.gene057185:CDS |
| TCAGAAAATAAACCTACAAT+AGG | 0.419834 | 3.1:-73937874 | None:intergenic |
| AAATTTATTCGCCGTCAGCC+TGG | 0.429279 | 3.1:+73944472 | MS.gene057185:CDS |
| GACGACAATGATAGTGAAAC+AGG | 0.430152 | 3.1:+73942118 | MS.gene057185:CDS |
| TTTCAAAATAGACATTACTT+TGG | 0.435914 | 3.1:-73942423 | None:intergenic |
| TCTTGCACGTAATTACTTGA+AGG | 0.436564 | 3.1:+73944627 | MS.gene057185:CDS |
| ACTCAATCAAAATATATTCC+AGG | 0.437776 | 3.1:-73944570 | None:intergenic |
| TTTGGATAGGAACTGTTTCT+GGG | 0.448460 | 3.1:-73941745 | None:intergenic |
| CCTCTCTCCCAAGACAAATT+GGG | 0.448562 | 3.1:-73939673 | None:intergenic |
| AGGGGCTCAGTTAGACGAAA+AGG | 0.453163 | 3.1:+73944417 | MS.gene057185:CDS |
| CTTTGCTGATAGTCATGGAT+TGG | 0.454687 | 3.1:+73940127 | MS.gene057185:CDS |
| TAGTGTCCTTGTTTGTTTCG+CGG | 0.459121 | 3.1:+73937513 | MS.gene057185:CDS |
| CCCTAGCTGCTTGAATTACA+AGG | 0.459721 | 3.1:-73944690 | None:intergenic |
| CTTCAACAATCCAATCTGTC+TGG | 0.460007 | 3.1:-73939983 | None:intergenic |
| CTACTTCTGAGAATCTATAA+TGG | 0.460491 | 3.1:-73940328 | None:intergenic |
| CTGTGTTTACAAATGTACTT+AGG | 0.462563 | 3.1:-73938302 | None:intergenic |
| CAATATGAGTCTTGTCATGT+GGG | 0.463965 | 3.1:+73942144 | MS.gene057185:CDS |
| TGTTTCTTTGGCATCAGAGA+AGG | 0.466330 | 3.1:+73944660 | MS.gene057185:CDS |
| GCTGAAGGGCACATTGAAGC+AGG | 0.468269 | 3.1:+73944094 | MS.gene057185:CDS |
| AGGACCTGCTCCAGACAGAT+TGG | 0.469540 | 3.1:+73939973 | MS.gene057185:CDS |
| ATTTGTGCACAGTTACAGAT+AGG | 0.471947 | 3.1:+73942485 | MS.gene057185:CDS |
| ATATCATTGCAATTGTAGAT+AGG | 0.476570 | 3.1:+73939781 | MS.gene057185:CDS |
| TTCTTGGAATAAACATGGGC+AGG | 0.477132 | 3.1:+73940432 | MS.gene057185:CDS |
| AGGAATCATTTCTAGTAAGA+TGG | 0.477916 | 3.1:+73942329 | MS.gene057185:CDS |
| TGGGAAGAGCACAGAAATGT+AGG | 0.479275 | 3.1:+73939883 | MS.gene057185:CDS |
| ATCTTACTTCAGAACAAGAA+AGG | 0.480771 | 3.1:-73944735 | None:intergenic |
| TGTGGCAGAAATTACAAAGA+AGG | 0.482018 | 3.1:+73937834 | MS.gene057185:CDS |
| ATTTCTAGTAAGATGGTTGA+AGG | 0.484169 | 3.1:+73942336 | MS.gene057185:CDS |
| GGGAAGAGCACAGAAATGTA+GGG | 0.487329 | 3.1:+73939884 | MS.gene057185:CDS |
| GGATTATATTTAAAACCAAA+AGG | 0.491218 | 3.1:+73939528 | MS.gene057185:CDS |
| TCAGTAAACCATACATTTCA+GGG | 0.492560 | 3.1:-73940073 | None:intergenic |
| GCTAAAACTTTCAAAACAAA+GGG | 0.493026 | 3.1:-73941716 | None:intergenic |
| CTGGCCGATCAGATAGTGAA+TGG | 0.494203 | 3.1:+73944491 | MS.gene057185:CDS |
| GGAACCAGAGCAACCTAGAA+AGG | 0.495147 | 3.1:-73940025 | None:intergenic |
| CTAGACTTTGCTGATAGTCA+TGG | 0.497149 | 3.1:+73940122 | MS.gene057185:CDS |
| AGGAACTGTTTCTGGGATAG+AGG | 0.499945 | 3.1:-73941738 | None:intergenic |
| TTCACTGTCATTACATCTGA+TGG | 0.502694 | 3.1:+73938233 | MS.gene057185:CDS |
| TGAGTTGCAGCAGTTCCATC+AGG | 0.503976 | 3.1:+73942063 | MS.gene057185:CDS |
| AGCCACATTCATTGCAACTC+TGG | 0.506244 | 3.1:+73939596 | MS.gene057185:CDS |
| TCTGATAATTTATCCGTTGG+CGG | 0.509822 | 3.1:+73939711 | MS.gene057185:CDS |
| AATTTCTGCCACAACTTCGC+CGG | 0.511963 | 3.1:-73937824 | None:intergenic |
| TCAGGCAAACGAAGATTCAA+AGG | 0.513716 | 3.1:+73937323 | None:intergenic |
| TGGTTCAAAGGTTCAGGAAG+AGG | 0.515500 | 3.1:+73939836 | MS.gene057185:CDS |
| GGCTAAAACTTTCAAAACAA+AGG | 0.518762 | 3.1:-73941717 | None:intergenic |
| TTTGCAATATAAGGACAGGC+TGG | 0.519556 | 3.1:+73940403 | MS.gene057185:CDS |
| GCTGTAGCACTTGCAGAAAG+TGG | 0.519972 | 3.1:+73941641 | MS.gene057185:CDS |
| CGCAGTCCGCGAAACAAACA+AGG | 0.520371 | 3.1:-73937519 | None:intergenic |
| TTATGCGCGAAAAGTTTCAC+AGG | 0.526229 | 3.1:+73942260 | MS.gene057185:CDS |
| TGACAATGCAAAATCAGGAC+TGG | 0.527576 | 3.1:-73939949 | None:intergenic |
| AGACATTCTAAATGGTTCAA+AGG | 0.527936 | 3.1:+73939824 | MS.gene057185:CDS |
| CTTGCACGTAATTACTTGAA+GGG | 0.530172 | 3.1:+73944628 | MS.gene057185:CDS |
| CAATCCAATCTGTCTGGAGC+AGG | 0.530703 | 3.1:-73939977 | None:intergenic |
| TCAATATGAGTCTTGTCATG+TGG | 0.532645 | 3.1:+73942143 | MS.gene057185:CDS |
| ATGTCTGATAATTTATCCGT+TGG | 0.533171 | 3.1:+73939708 | MS.gene057185:CDS |
| AACATTTCTTGGAATAAACA+TGG | 0.533502 | 3.1:+73940427 | MS.gene057185:CDS |
| ATATATTCCAGGTCCAGAAA+AGG | 0.535778 | 3.1:-73944559 | None:intergenic |
| TGAAGTATGGGATGTTCGCT+TGG | 0.539079 | 3.1:+73940367 | MS.gene057185:CDS |
| GAGCAAACTCAAGTAGGCTC+AGG | 0.542431 | 3.1:-73942024 | None:intergenic |
| CTTGAGTTTGCTCTTCGCAA+AGG | 0.542595 | 3.1:+73942034 | MS.gene057185:CDS |
| GATAATTTATCCGTTGGCGG+TGG | 0.543147 | 3.1:+73939714 | MS.gene057185:CDS |
| CCTTGTAATTCAAGCAGCTA+GGG | 0.543974 | 3.1:+73944690 | MS.gene057185:CDS |
| AAATACGTTGCAGTTGCTGC+GGG | 0.545968 | 3.1:+73937542 | MS.gene057185:CDS |
| GAATAAATTGGACATGTGCT+TGG | 0.547676 | 3.1:+73942372 | MS.gene057185:CDS |
| AAATCTGTCCCTGAAATGTA+TGG | 0.547795 | 3.1:+73940065 | MS.gene057185:CDS |
| CCAATTTGTCTTGGGAGAGA+GGG | 0.548608 | 3.1:+73939674 | MS.gene057185:CDS |
| TTTACAAATGTACTTAGGAA+AGG | 0.550330 | 3.1:-73938297 | None:intergenic |
| GCAAAGAGAATACCTGCTCC+AGG | 0.550349 | 3.1:-73939497 | None:intergenic |
| GCAGAGGATTGCTTAAAGCT+GGG | 0.553221 | 3.1:+73944596 | MS.gene057185:CDS |
| TGATAGTCATGGATTGGATA+AGG | 0.553330 | 3.1:+73940133 | MS.gene057185:CDS |
| TAAATTCACCGGCGAAGTTG+TGG | 0.555240 | 3.1:+73937816 | MS.gene057185:CDS |
| TATGCAGTACTTGAGGGAAA+AGG | 0.556850 | 3.1:+73944531 | MS.gene057185:CDS |
| TAAAACTTCAAGCACAGACC+TGG | 0.556976 | 3.1:+73939479 | MS.gene057185:CDS |
| AAAAGATTTACCACCGCCAA+CGG | 0.563211 | 3.1:-73939724 | None:intergenic |
| TGGCCGATCAGATAGTGAAT+GGG | 0.564079 | 3.1:+73944492 | MS.gene057185:CDS |
| GGGGCTCAGTTAGACGAAAA+GGG | 0.564240 | 3.1:+73944418 | MS.gene057185:CDS |
| GCCGTCACAGCATCTTCTGT+TGG | 0.565850 | 3.1:-73940275 | None:intergenic |
| CTGCATATCACGCCACATGC+TGG | 0.565897 | 3.1:-73944515 | None:intergenic |
| CTAAGTACATTTGTAAACAC+AGG | 0.566768 | 3.1:+73938303 | MS.gene057185:CDS |
| CCAAGAAAATGCTTAACAAG+AGG | 0.571156 | 3.1:-73941911 | None:intergenic |
| CATTCACTATCTGATCGGCC+AGG | 0.573114 | 3.1:-73944490 | None:intergenic |
| TTCAAGCACAGACCTGGAGC+AGG | 0.575995 | 3.1:+73939485 | MS.gene057185:CDS |
| TCTGTGCTCTTCCCAGAGCA+GGG | 0.576378 | 3.1:-73939875 | None:intergenic |
| CTGTAGCACTTGCAGAAAGT+GGG | 0.576919 | 3.1:+73941642 | MS.gene057185:CDS |
| TATGGATAGAGCTAGAGCTA+TGG | 0.583943 | 3.1:+73941973 | MS.gene057185:CDS |
| AAGTGAGAGAAGAGAAAGCA+AGG | 0.584401 | 3.1:-73937349 | None:intergenic |
| AAAGGTTAAGTTCATGGTGG+CGG | 0.586758 | 3.1:-73938358 | None:intergenic |
| ATTGCAATTGTAGATAGGAA+TGG | 0.588079 | 3.1:+73939786 | MS.gene057185:CDS |
| TGTATGGGCAGCTTCTTCCT+GGG | 0.588104 | 3.1:+73941768 | MS.gene057185:CDS |
| ATCCAGAGTTGCAATGAATG+TGG | 0.589243 | 3.1:-73939598 | None:intergenic |
| ACAAATGTACTTAGGAAAGG+TGG | 0.589842 | 3.1:-73938294 | None:intergenic |
| TGATGATTCTAGTGAAGTAT+GGG | 0.591122 | 3.1:+73940355 | MS.gene057185:CDS |
| TGCTTGGTGGTAATTGAGGA+AGG | 0.592088 | 3.1:+73942388 | MS.gene057185:CDS |
| CAGTTCCTATCCAAATGTAT+GGG | 0.592408 | 3.1:+73941753 | MS.gene057185:CDS |
| GCGTGATATGCAGTACTTGA+GGG | 0.592452 | 3.1:+73944525 | MS.gene057185:CDS |
| CAGTGGTTGAATTCTAGTCA+AGG | 0.594330 | 3.1:+73940173 | MS.gene057185:CDS |
| TTTCGTCTAACTGAGCCCCT+GGG | 0.595088 | 3.1:-73944414 | None:intergenic |
| TGAAGGTGTGAATCAACTCA+AGG | 0.595809 | 3.1:+73937448 | MS.gene057185:intron |
| TTCTATAAATCAAAATCTGG+AGG | 0.595909 | 3.1:+73942309 | MS.gene057185:CDS |
| CTTCGTTAATAGGCATACTA+CGG | 0.596557 | 3.1:-73941616 | None:intergenic |
| TCTAAGCTTCCTCAAATGCA+TGG | 0.600977 | 3.1:+73942532 | MS.gene057185:CDS |
| TATCTGATCGGCCAGGCTGA+CGG | 0.601543 | 3.1:-73944483 | None:intergenic |
| TGCCTCACAGCAACACCAGA+CGG | 0.606152 | 3.1:-73941800 | None:intergenic |
| TTCCGTCTGGTGTTGCTGTG+AGG | 0.607160 | 3.1:+73941798 | MS.gene057185:CDS |
| GCCTTGTAATTCAAGCAGCT+AGG | 0.608877 | 3.1:+73944689 | MS.gene057185:CDS |
| CAAATTGAGATCAGTTATGG+AGG | 0.609768 | 3.1:+73938266 | MS.gene057185:CDS |
| CATGTGCTTGGTGGTAATTG+AGG | 0.609897 | 3.1:+73942384 | MS.gene057185:CDS |
| ACATTTCTTGGAATAAACAT+GGG | 0.611045 | 3.1:+73940428 | MS.gene057185:CDS |
| AAAAGACTTAGAGTTGCTGA+AGG | 0.616824 | 3.1:+73944079 | MS.gene057185:CDS |
| AGCTGCCCATACATTTGGAT+AGG | 0.618349 | 3.1:-73941758 | None:intergenic |
| TGCGAAGAGCAAACTCAAGT+AGG | 0.618665 | 3.1:-73942030 | None:intergenic |
| ATATGAGTCTTGTCATGTGG+GGG | 0.618909 | 3.1:+73942146 | MS.gene057185:CDS |
| GAAATACGTTGCAGTTGCTG+CGG | 0.621532 | 3.1:+73937541 | MS.gene057185:CDS |
| ATAGTGAATGGGCCAGCATG+TGG | 0.621832 | 3.1:+73944503 | MS.gene057185:CDS |
| ACCAACAGAAGATGCTGTGA+CGG | 0.623916 | 3.1:+73940274 | MS.gene057185:CDS |
| TTGGGTTGAATGCAAGAGGA+TGG | 0.624885 | 3.1:+73941829 | MS.gene057185:CDS |
| TGTGCACAGTTACAGATAGG+TGG | 0.628104 | 3.1:+73942488 | MS.gene057185:CDS |
| CAAAGCAGTAAACGTTGTTG+CGG | 0.631113 | 3.1:-73938334 | None:intergenic |
| AATATGAGTCTTGTCATGTG+GGG | 0.631958 | 3.1:+73942145 | MS.gene057185:CDS |
| GCAAGTATAAGACATCCTGA+TGG | 0.633505 | 3.1:-73942078 | None:intergenic |
| TAAATTGGACATGTGCTTGG+TGG | 0.633593 | 3.1:+73942375 | MS.gene057185:CDS |
| CCAGACGGAAAAGACCTCCC+AGG | 0.641041 | 3.1:-73941785 | None:intergenic |
| CTGAAGGGCACATTGAAGCA+GGG | 0.643193 | 3.1:+73944095 | MS.gene057185:CDS |
| TGGCCCATTCACTATCTGAT+CGG | 0.643989 | 3.1:-73944495 | None:intergenic |
| ATGATTGGGTTGAATGCAAG+AGG | 0.648686 | 3.1:+73941825 | MS.gene057185:CDS |
| TATGCGCGAAAAGTTTCACA+GGG | 0.666334 | 3.1:+73942261 | MS.gene057185:CDS |
| ATGGGCAGCTTCTTCCTGGG+AGG | 0.668795 | 3.1:+73941771 | MS.gene057185:CDS |
| GGAAGAGCACAGAAATGTAG+GGG | 0.674483 | 3.1:+73939885 | MS.gene057185:CDS |
| TATGAGTCTTGTCATGTGGG+GGG | 0.681239 | 3.1:+73942147 | MS.gene057185:CDS |
| TAAATTTAGAAAGAATAAGG+CGG | 0.681647 | 3.1:-73944456 | None:intergenic |
| AAAGACTTAGAGTTGCTGAA+GGG | 0.684679 | 3.1:+73944080 | MS.gene057185:CDS |
| ATTTCTCAGAAAATGAAACA+AGG | 0.691917 | 3.1:-73940046 | None:intergenic |
| GGCGTGATATGCAGTACTTG+AGG | 0.699136 | 3.1:+73944524 | MS.gene057185:CDS |
| AATTGTAGATAGGAATGGTG+TGG | 0.707479 | 3.1:+73939791 | MS.gene057185:CDS |
| GTTGCAATGAATGTGGCTTG+TGG | 0.713358 | 3.1:-73939591 | None:intergenic |
| GCTTGGTGGTAATTGAGGAA+GGG | 0.727742 | 3.1:+73942389 | MS.gene057185:CDS |
| ATGAAGTTCTGAAGTCACAG+TGG | 0.748170 | 3.1:+73940156 | MS.gene057185:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73937327 | 73944750 | 73937327 | ID=MS.gene057185 |
| chr3.1 | mRNA | 73937327 | 73944750 | 73937327 | ID=MS.gene057185.t1;Parent=MS.gene057185 |
| chr3.1 | exon | 73937327 | 73937375 | 73937327 | ID=MS.gene057185.t1.exon1;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73937327 | 73937375 | 73937327 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73937453 | 73937626 | 73937453 | ID=MS.gene057185.t1.exon2;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73937453 | 73937626 | 73937453 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73937725 | 73937929 | 73937725 | ID=MS.gene057185.t1.exon3;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73937725 | 73937929 | 73937725 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73938232 | 73938404 | 73938232 | ID=MS.gene057185.t1.exon4;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73938232 | 73938404 | 73938232 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73939454 | 73940453 | 73939454 | ID=MS.gene057185.t1.exon5;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73939454 | 73940453 | 73939454 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73941589 | 73942553 | 73941589 | ID=MS.gene057185.t1.exon6;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73941589 | 73942553 | 73941589 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73944050 | 73944138 | 73944050 | ID=MS.gene057185.t1.exon7;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73944050 | 73944138 | 73944050 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| chr3.1 | exon | 73944391 | 73944750 | 73944391 | ID=MS.gene057185.t1.exon8;Parent=MS.gene057185.t1 |
| chr3.1 | CDS | 73944391 | 73944750 | 73944391 | ID=cds.MS.gene057185.t1;Parent=MS.gene057185.t1 |
| Gene Sequence |
| Protein sequence |
