Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057186.t1 | XP_003602296.2 | 85.9 | 771 | 28 | 3 | 1 | 690 | 1 | 771 | 0.00E+00 | 1199.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057186.t1 | Q9FIN7 | 41.1 | 722 | 322 | 9 | 58 | 688 | 63 | 772 | 2.4e-151 | 537.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057186.t1 | G7J7I6 | 85.9 | 771 | 28 | 3 | 1 | 690 | 1 | 771 | 0.0e+00 | 1199.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057185 | MS.gene057186 | 0.913117 | 8.92E-84 | -1.69E-46 |
| MS.gene057186 | MS.gene060349 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene057186 | MS.gene06880 | 0.864555 | 1.12E-64 | -1.69E-46 |
| MS.gene057186 | MS.gene54037 | 0.810493 | 1.12E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057186.t1 | MTR_3g091940 | 85.733 | 771 | 29 | 3 | 1 | 690 | 1 | 771 | 0.0 | 1308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057186.t1 | AT5G24350 | 42.105 | 760 | 334 | 12 | 5 | 671 | 9 | 755 | 0.0 | 578 |
| MS.gene057186.t1 | AT5G24350 | 42.105 | 760 | 334 | 12 | 5 | 671 | 9 | 755 | 0.0 | 578 |
| MS.gene057186.t1 | AT5G24350 | 40.641 | 780 | 337 | 13 | 5 | 671 | 9 | 775 | 2.93e-178 | 561 |
Find 136 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCTCTCCCAAGACAAAT+TGG | 0.188436 | 3.2:+77421877 | None:intergenic |
| ATTTGGATAGGAACTGTTTC+TGG | 0.232942 | 3.2:+77419806 | None:intergenic |
| ATCAGTAAACCATACATTTC+AGG | 0.249512 | 3.2:+77421477 | None:intergenic |
| TTAAACAATTTCACCTTTCT+AGG | 0.250369 | 3.2:-77421539 | MS.gene057186:CDS |
| GTGACGGCTTTGCTGGCTTA+TGG | 0.289149 | 3.2:-77421261 | MS.gene057186:CDS |
| GATCTTGCCATGTTTCTCTT+TGG | 0.295881 | 3.2:-77422097 | MS.gene057186:CDS |
| GCTACAGCAGCTTCGTTAAT+AGG | 0.297401 | 3.2:+77419926 | None:intergenic |
| GTGATGATTCTAGTGAAGTA+TGG | 0.305485 | 3.2:-77421197 | MS.gene057186:CDS |
| AAAATTTAAATTTATGCTTA+AGG | 0.309359 | 3.2:-77419367 | MS.gene057186:CDS |
| ATGTTGATAGACATTCTAAA+TGG | 0.315192 | 3.2:-77421735 | MS.gene057186:CDS |
| AAAATATCTGCGCCTATTGT+AGG | 0.318309 | 3.2:-77423689 | MS.gene057186:CDS |
| AGATGCTGTGACGGCTTTGC+TGG | 0.320928 | 3.2:-77421268 | MS.gene057186:CDS |
| AAATGTATGGTTTACTGATT+AGG | 0.323352 | 3.2:-77421473 | MS.gene057186:CDS |
| CTTGCAGAAAGTGGGAAAAT+TGG | 0.326443 | 3.2:-77419902 | MS.gene057186:CDS |
| ATGTATGGGCAGCTTCTTCC+TGG | 0.331843 | 3.2:-77419785 | MS.gene057186:CDS |
| TCTAAATGGTTCAAAGGTTC+AGG | 0.336367 | 3.2:-77421721 | MS.gene057186:CDS |
| TCCGAAGATGATGAAATTCT+TGG | 0.337755 | 3.2:-77423791 | MS.gene057186:CDS |
| ACAAAGGGAGACAAAGAATA+TGG | 0.338245 | 3.2:+77419851 | None:intergenic |
| TGAGCTCTCAAAATGGTATA+TGG | 0.340782 | 3.2:-77419597 | MS.gene057186:CDS |
| GACAGGCTGGAAACATTTCT+TGG | 0.344394 | 3.2:-77421135 | MS.gene057186:CDS |
| AAATTTAAATTTATGCTTAA+GGG | 0.348375 | 3.2:-77419366 | MS.gene057186:CDS |
| TTCACCTTTCTAGGTTGCTC+TGG | 0.354557 | 3.2:-77421530 | MS.gene057186:CDS |
| GTGGTGTTGAGGAGGGTAAT+TGG | 0.357738 | 3.2:+77424337 | None:intergenic |
| TACACTCTCCCAATTTGTCT+TGG | 0.371687 | 3.2:-77421886 | MS.gene057186:CDS |
| GAAGAAGCTGCCCATACATT+TGG | 0.372186 | 3.2:+77419789 | None:intergenic |
| CAACAAATTGAGATCAGTTA+TGG | 0.375159 | 3.2:-77423288 | MS.gene057186:CDS |
| TGCTGTGAGGCAAGATGATT+GGG | 0.376762 | 3.2:-77419741 | MS.gene057186:CDS |
| TCCTCTGACAATGCAAAATC+AGG | 0.381642 | 3.2:+77421597 | None:intergenic |
| TTCTGTGCTCTTCCCAGAGC+AGG | 0.382408 | 3.2:+77421675 | None:intergenic |
| CAATCGATGAGCTCTCAAAA+TGG | 0.382725 | 3.2:-77419604 | MS.gene057186:CDS |
| ATATTGCAAAATTTGAAGTC+TGG | 0.386094 | 3.2:+77421161 | None:intergenic |
| CCCAATTTGTCTTGGGAGAG+AGG | 0.386776 | 3.2:-77421878 | MS.gene057186:CDS |
| TATCTACAATTGCAATGATA+TGG | 0.386989 | 3.2:+77421772 | None:intergenic |
| TCGTGTGAACAGCTGCAAAA+AGG | 0.392394 | 3.2:+77423175 | None:intergenic |
| TTTGAGAGCTCATCGATTGA+TGG | 0.392826 | 3.2:+77419608 | None:intergenic |
| TGACTTGAATTTGAATATCA+TGG | 0.396761 | 3.2:+77419672 | None:intergenic |
| ACAGTTCCTATCCAAATGTA+TGG | 0.397947 | 3.2:-77419800 | MS.gene057186:CDS |
| CAGATTGGATTGTTGAAGAC+AGG | 0.404118 | 3.2:-77421563 | MS.gene057186:CDS |
| CTTTCTCTTCTCTCACTTCG+AGG | 0.405408 | 3.2:-77424197 | MS.gene057186:intron |
| TTGCTGTGAGGCAAGATGAT+TGG | 0.409982 | 3.2:-77419742 | MS.gene057186:CDS |
| TCCAAGAATTTCATCATCTT+CGG | 0.412965 | 3.2:+77423790 | None:intergenic |
| ACACTCTCCCAATTTGTCTT+GGG | 0.414408 | 3.2:-77421885 | MS.gene057186:CDS |
| GCAGCTGTTCACACGAAGTC+TGG | 0.417595 | 3.2:-77423168 | MS.gene057186:intron |
| GTACATTTAGTGTGGGAGAT+TGG | 0.418918 | 3.2:-77423814 | MS.gene057186:CDS |
| TCAGAAAATAAACCTACAAT+AGG | 0.419834 | 3.2:+77423677 | None:intergenic |
| GACGACAATGATAGTGAAAC+AGG | 0.430152 | 3.2:-77419434 | MS.gene057186:CDS |
| TATTGACCTGGTGTTGTTGT+TGG | 0.437817 | 3.2:+77424315 | None:intergenic |
| TTTGGATAGGAACTGTTTCT+GGG | 0.448460 | 3.2:+77419807 | None:intergenic |
| CCTCTCTCCCAAGACAAATT+GGG | 0.448562 | 3.2:+77421878 | None:intergenic |
| CTTTGCTGATAGTCATGGAT+TGG | 0.454687 | 3.2:-77421424 | MS.gene057186:CDS |
| TAGTGTCCTTGTTTGTTTCG+CGG | 0.459121 | 3.2:-77424038 | MS.gene057186:CDS |
| CTTCAACAATCCAATCTGTC+TGG | 0.460007 | 3.2:+77421568 | None:intergenic |
| CTACTTCTGAGAATCTATAA+TGG | 0.460491 | 3.2:+77421223 | None:intergenic |
| CTGTGTTTACAAATGTACTT+AGG | 0.462563 | 3.2:+77423249 | None:intergenic |
| AGGACCTGCTCCAGACAGAT+TGG | 0.469540 | 3.2:-77421578 | MS.gene057186:CDS |
| ATATCATTGCAATTGTAGAT+AGG | 0.476570 | 3.2:-77421770 | MS.gene057186:CDS |
| TTCTTGGAATAAACATGGGC+AGG | 0.477132 | 3.2:-77421119 | MS.gene057186:intron |
| TGGGAAGAGCACAGAAATGT+AGG | 0.479275 | 3.2:-77421668 | MS.gene057186:CDS |
| TGTGGCAGAAATTACAAAGA+AGG | 0.482018 | 3.2:-77423717 | MS.gene057186:CDS |
| TGACCTGGTGTTGTTGTTGG+TGG | 0.484305 | 3.2:+77424318 | None:intergenic |
| TGACGTTGCGTTTCGTAGAG+TGG | 0.485197 | 3.2:+77424365 | None:intergenic |
| GGGAAGAGCACAGAAATGTA+GGG | 0.487329 | 3.2:-77421667 | MS.gene057186:CDS |
| TCAGTAAACCATACATTTCA+GGG | 0.492560 | 3.2:+77421478 | None:intergenic |
| GCTAAAACTTTCAAAACAAA+GGG | 0.493026 | 3.2:+77419836 | None:intergenic |
| GGAACCAGAGCAACCTAGAA+AGG | 0.495147 | 3.2:+77421526 | None:intergenic |
| GTTGTTGGTGGTGTTGAGGA+GGG | 0.495848 | 3.2:+77424330 | None:intergenic |
| CTAGACTTTGCTGATAGTCA+TGG | 0.497149 | 3.2:-77421429 | MS.gene057186:CDS |
| AGGAACTGTTTCTGGGATAG+AGG | 0.499945 | 3.2:+77419814 | None:intergenic |
| TTCACTGTCATTACATCTGA+TGG | 0.502694 | 3.2:-77423318 | MS.gene057186:CDS |
| TGAGTTGCAGCAGTTCCATC+AGG | 0.503976 | 3.2:-77419489 | MS.gene057186:CDS |
| TCTGATAATTTATCCGTTGG+CGG | 0.509822 | 3.2:-77421840 | MS.gene057186:CDS |
| AATTTCTGCCACAACTTCGC+CGG | 0.511963 | 3.2:+77423727 | None:intergenic |
| TCAGGCAAACGAAGATTCAA+AGG | 0.513716 | 3.2:-77424228 | MS.gene057186:intron |
| CAATATGAGTCTTGTCATGT+GGG | 0.514118 | 3.2:-77419408 | MS.gene057186:CDS |
| TGGTTCAAAGGTTCAGGAAG+AGG | 0.515500 | 3.2:-77421715 | MS.gene057186:CDS |
| TGTTGTTGTTGGTGGTGTTG+AGG | 0.517419 | 3.2:+77424326 | None:intergenic |
| GGCTAAAACTTTCAAAACAA+AGG | 0.518762 | 3.2:+77419835 | None:intergenic |
| TTTGCAATATAAGGACAGGC+TGG | 0.519556 | 3.2:-77421148 | MS.gene057186:CDS |
| GCTGTAGCACTTGCAGAAAG+TGG | 0.519972 | 3.2:-77419911 | MS.gene057186:CDS |
| CGCAGTCCGCGAAACAAACA+AGG | 0.520371 | 3.2:+77424032 | None:intergenic |
| TGACAATGCAAAATCAGGAC+TGG | 0.527576 | 3.2:+77421602 | None:intergenic |
| TGTTGTTGGTGGTGTTGAGG+AGG | 0.527918 | 3.2:+77424329 | None:intergenic |
| AGACATTCTAAATGGTTCAA+AGG | 0.527936 | 3.2:-77421727 | MS.gene057186:CDS |
| CAATCCAATCTGTCTGGAGC+AGG | 0.530703 | 3.2:+77421574 | None:intergenic |
| TCAATATGAGTCTTGTCATG+TGG | 0.532645 | 3.2:-77419409 | MS.gene057186:CDS |
| ATGTCTGATAATTTATCCGT+TGG | 0.533171 | 3.2:-77421843 | MS.gene057186:CDS |
| AACATTTCTTGGAATAAACA+TGG | 0.533502 | 3.2:-77421124 | MS.gene057186:CDS |
| TGAAGTATGGGATGTTCGCT+TGG | 0.539079 | 3.2:-77421184 | MS.gene057186:CDS |
| GAGCAAACTCAAGTAGGCTC+AGG | 0.542431 | 3.2:+77419528 | None:intergenic |
| CTTGAGTTTGCTCTTCGCAA+AGG | 0.542595 | 3.2:-77419518 | MS.gene057186:CDS |
| GATAATTTATCCGTTGGCGG+TGG | 0.543147 | 3.2:-77421837 | MS.gene057186:CDS |
| AAATACGTTGCAGTTGCTGC+GGG | 0.545968 | 3.2:-77424009 | MS.gene057186:CDS |
| AAATCTGTCCCTGAAATGTA+TGG | 0.547795 | 3.2:-77421486 | MS.gene057186:CDS |
| CCAATTTGTCTTGGGAGAGA+GGG | 0.548608 | 3.2:-77421877 | MS.gene057186:CDS |
| TTTACAAATGTACTTAGGAA+AGG | 0.550330 | 3.2:+77423254 | None:intergenic |
| GCAAAGAGAATACCTGCTCC+AGG | 0.550349 | 3.2:+77422054 | None:intergenic |
| TGATAGTCATGGATTGGATA+AGG | 0.553330 | 3.2:-77421418 | MS.gene057186:CDS |
| TAAATTCACCGGCGAAGTTG+TGG | 0.555240 | 3.2:-77423735 | MS.gene057186:CDS |
| TAAAACTTCAAGCACAGACC+TGG | 0.556976 | 3.2:-77422072 | MS.gene057186:CDS |
| AAAAGATTTACCACCGCCAA+CGG | 0.563211 | 3.2:+77421827 | None:intergenic |
| GCCGTCACAGCATCTTCTGT+TGG | 0.565850 | 3.2:+77421276 | None:intergenic |
| CTAAGTACATTTGTAAACAC+AGG | 0.566768 | 3.2:-77423248 | MS.gene057186:CDS |
| CCAAGAAAATGCTTAACAAG+AGG | 0.571156 | 3.2:+77419641 | None:intergenic |
| TTCAAGCACAGACCTGGAGC+AGG | 0.575995 | 3.2:-77422066 | MS.gene057186:intron |
| TCTGTGCTCTTCCCAGAGCA+GGG | 0.576378 | 3.2:+77421676 | None:intergenic |
| CTGTAGCACTTGCAGAAAGT+GGG | 0.576919 | 3.2:-77419910 | MS.gene057186:CDS |
| TATGGATAGAGCTAGAGCTA+TGG | 0.583943 | 3.2:-77419579 | MS.gene057186:CDS |
| AAGTGAGAGAAGAGAAAGCA+AGG | 0.584401 | 3.2:+77424202 | None:intergenic |
| AAAGGTTAAGTTCATGGTGG+CGG | 0.586758 | 3.2:+77423193 | None:intergenic |
| ATTGCAATTGTAGATAGGAA+TGG | 0.588079 | 3.2:-77421765 | MS.gene057186:CDS |
| TGTATGGGCAGCTTCTTCCT+GGG | 0.588104 | 3.2:-77419784 | MS.gene057186:CDS |
| ACAAATGTACTTAGGAAAGG+TGG | 0.589842 | 3.2:+77423257 | None:intergenic |
| TGATGATTCTAGTGAAGTAT+GGG | 0.591122 | 3.2:-77421196 | MS.gene057186:CDS |
| CAGTTCCTATCCAAATGTAT+GGG | 0.592408 | 3.2:-77419799 | MS.gene057186:CDS |
| TGAAGGTGTGAATCAACTCA+AGG | 0.595809 | 3.2:-77424103 | MS.gene057186:intron |
| CTTCGTTAATAGGCATACTA+CGG | 0.596557 | 3.2:+77419936 | None:intergenic |
| TGCCTCACAGCAACACCAGA+CGG | 0.606152 | 3.2:+77419752 | None:intergenic |
| TTCCGTCTGGTGTTGCTGTG+AGG | 0.607160 | 3.2:-77419754 | MS.gene057186:CDS |
| CAAATTGAGATCAGTTATGG+AGG | 0.609768 | 3.2:-77423285 | MS.gene057186:CDS |
| ACATTTCTTGGAATAAACAT+GGG | 0.611045 | 3.2:-77421123 | MS.gene057186:CDS |
| AGCTGCCCATACATTTGGAT+AGG | 0.618349 | 3.2:+77419794 | None:intergenic |
| TGCGAAGAGCAAACTCAAGT+AGG | 0.618665 | 3.2:+77419522 | None:intergenic |
| GAAATACGTTGCAGTTGCTG+CGG | 0.621532 | 3.2:-77424010 | MS.gene057186:CDS |
| ACCAACAGAAGATGCTGTGA+CGG | 0.623916 | 3.2:-77421277 | MS.gene057186:CDS |
| TTGGGTTGAATGCAAGAGGA+TGG | 0.624885 | 3.2:-77419723 | MS.gene057186:CDS |
| ACACCACCAACAACAACACC+AGG | 0.627122 | 3.2:-77424321 | MS.gene057186:intron |
| CAAAGCAGTAAACGTTGTTG+CGG | 0.631113 | 3.2:+77423217 | None:intergenic |
| GCAAGTATAAGACATCCTGA+TGG | 0.633505 | 3.2:+77419474 | None:intergenic |
| CCAGACGGAAAAGACCTCCC+AGG | 0.641041 | 3.2:+77419767 | None:intergenic |
| AATATGAGTCTTGTCATGTG+GGG | 0.642636 | 3.2:-77419407 | MS.gene057186:CDS |
| ATGATTGGGTTGAATGCAAG+AGG | 0.648686 | 3.2:-77419727 | MS.gene057186:CDS |
| ATATGAGTCTTGTCATGTGG+GGG | 0.650464 | 3.2:-77419406 | MS.gene057186:CDS |
| ATGGGCAGCTTCTTCCTGGG+AGG | 0.668795 | 3.2:-77419781 | MS.gene057186:CDS |
| GGAAGAGCACAGAAATGTAG+GGG | 0.674483 | 3.2:-77421666 | MS.gene057186:CDS |
| ATTTCTCAGAAAATGAAACA+AGG | 0.691917 | 3.2:+77421505 | None:intergenic |
| AATTGTAGATAGGAATGGTG+TGG | 0.707479 | 3.2:-77421760 | MS.gene057186:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTAAATTTATGCTTA+AGG | - | chr3.2:77424353-77424372 | MS.gene057186:CDS | 10.0% |
| !! | AAATTTAAATTTATGCTTAA+GGG | - | chr3.2:77424354-77424373 | MS.gene057186:CDS | 10.0% |
| !!! | ATTCTGTAATTTTTTTTTTT+TGG | - | chr3.2:77423590-77423609 | MS.gene057186:intron | 10.0% |
| !!! | AATTTAAATTTTTCATAGTC+TGG | + | chr3.2:77424345-77424364 | None:intergenic | 15.0% |
| !!! | CTCTTATTTAAAAGTTAAAA+AGG | - | chr3.2:77422716-77422735 | MS.gene057186:intron | 15.0% |
| !!! | GTATAATCATAAAAGTATTA+TGG | + | chr3.2:77421198-77421217 | None:intergenic | 15.0% |
| !!! | TATATTTTTGGCAAATATTA+CGG | - | chr3.2:77422380-77422399 | MS.gene057186:intron | 15.0% |
| !!! | TTGTATTTTATTAAATTCAC+CGG | - | chr3.2:77419974-77419993 | MS.gene057186:intron | 15.0% |
| !! | AAATTACAAAGAAACAAAAG+AGG | - | chr3.2:77422801-77422820 | MS.gene057186:intron | 20.0% |
| !! | AGCAGAAAGATAAAAAAATA+AGG | + | chr3.2:77421295-77421314 | None:intergenic | 20.0% |
| !! | CAAATATTTGTACATGAATA+CGG | - | chr3.2:77420858-77420877 | MS.gene057186:intron | 20.0% |
| !! | CTTCTATATGATAATAGATT+AGG | - | chr3.2:77420723-77420742 | MS.gene057186:intron | 20.0% |
| !! | TTAAAACCAAAAGGTTATAA+AGG | - | chr3.2:77421706-77421725 | MS.gene057186:CDS | 20.0% |
| !!! | ACTTCAAATTTTGCAATATA+AGG | - | chr3.2:77422563-77422582 | MS.gene057186:intron | 20.0% |
| !!! | CAGTCAATAAATTTTAAGAA+GGG | - | chr3.2:77421035-77421054 | MS.gene057186:intron | 20.0% |
| !!! | GGATTATATTTAAAACCAAA+AGG | - | chr3.2:77421697-77421716 | MS.gene057186:CDS | 20.0% |
| !!! | TCAATTTTTCATAGAGTTAA+AGG | + | chr3.2:77423529-77423548 | None:intergenic | 20.0% |
| !!! | TCAGTCAATAAATTTTAAGA+AGG | - | chr3.2:77421034-77421053 | MS.gene057186:intron | 20.0% |
| !!! | TTTCTTTGTAATTTTGTCAA+AGG | + | chr3.2:77422795-77422814 | None:intergenic | 20.0% |
| ! | AAAAAGGAATCATTTGTAAG+TGG | - | chr3.2:77422732-77422751 | MS.gene057186:intron | 25.0% |
| ! | AAACAGAACGAATAAATAGA+TGG | + | chr3.2:77423461-77423480 | None:intergenic | 25.0% |
| ! | AAACTTACATGGTTAATGTT+AGG | - | chr3.2:77420348-77420367 | MS.gene057186:intron | 25.0% |
| ! | AAATTGAAGAAATATTGACC+TGG | + | chr3.2:77419420-77419439 | None:intergenic | 25.0% |
| ! | AACATTTCTTGGAATAAACA+TGG | - | chr3.2:77422596-77422615 | MS.gene057186:intron | 25.0% |
| ! | ACATTTCTTGGAATAAACAT+GGG | - | chr3.2:77422597-77422616 | MS.gene057186:intron | 25.0% |
| ! | ATATCATTGCAATTGTAGAT+AGG | - | chr3.2:77421950-77421969 | MS.gene057186:intron | 25.0% |
| ! | ATTTCTCAGAAAATGAAACA+AGG | + | chr3.2:77422218-77422237 | None:intergenic | 25.0% |
| ! | CATAATTTGGTAAACTTACA+TGG | - | chr3.2:77420337-77420356 | MS.gene057186:intron | 25.0% |
| ! | CTATTATCATATAGAAGAAG+TGG | + | chr3.2:77420720-77420739 | None:intergenic | 25.0% |
| ! | GCTAAAACTTTCAAAACAAA+GGG | + | chr3.2:77423887-77423906 | None:intergenic | 25.0% |
| ! | GCTTAACAATATGATGAATA+TGG | + | chr3.2:77422982-77423001 | None:intergenic | 25.0% |
| ! | GGTTTCTCAACAAATATATT+GGG | + | chr3.2:77422855-77422874 | None:intergenic | 25.0% |
| ! | GTGATATATAAACCTACTTT+AGG | + | chr3.2:77423226-77423245 | None:intergenic | 25.0% |
| ! | GTTTCTCAACAAATATATTG+GGG | + | chr3.2:77422854-77422873 | None:intergenic | 25.0% |
| ! | TAGCATACAAGAAACAAATT+AGG | + | chr3.2:77420123-77420142 | None:intergenic | 25.0% |
| ! | TAGTATCTCTCATATCTTTA+AGG | + | chr3.2:77422951-77422970 | None:intergenic | 25.0% |
| ! | TAGTGTTGTATATATCATCT+AGG | - | chr3.2:77421601-77421620 | MS.gene057186:CDS | 25.0% |
| ! | TATCTACAATTGCAATGATA+TGG | + | chr3.2:77421951-77421970 | None:intergenic | 25.0% |
| ! | TCAGAAAATAAACCTACAAT+AGG | + | chr3.2:77420046-77420065 | None:intergenic | 25.0% |
| ! | TCATTAAATCTCTAGATCTA+TGG | + | chr3.2:77420176-77420195 | None:intergenic | 25.0% |
| ! | TGACTTGAATTTGAATATCA+TGG | + | chr3.2:77424051-77424070 | None:intergenic | 25.0% |
| ! | TTAAACAATTTCACCTTTCT+AGG | - | chr3.2:77422181-77422200 | MS.gene057186:intron | 25.0% |
| ! | TTTACAAATGTACTTAGGAA+AGG | + | chr3.2:77420469-77420488 | None:intergenic | 25.0% |
| ! | TTTGAATGTGTTCATAGAAT+TGG | - | chr3.2:77422420-77422439 | MS.gene057186:intron | 25.0% |
| !! | AAATGTATGGTTTACTGATT+AGG | - | chr3.2:77422247-77422266 | MS.gene057186:intron | 25.0% |
| !! | AAATTTTGCAATATAAGGAC+AGG | - | chr3.2:77422568-77422587 | MS.gene057186:intron | 25.0% |
| !! | ATATTGCAAAATTTGAAGTC+TGG | + | chr3.2:77422562-77422581 | None:intergenic | 25.0% |
| !! | ATGTTGATAGACATTCTAAA+TGG | - | chr3.2:77421985-77422004 | MS.gene057186:intron | 25.0% |
| !! | CAATCATATTCAATTTTCAC+CGG | - | chr3.2:77419774-77419793 | MS.gene057186:CDS | 25.0% |
| !! | TATGTAGTGCAGTTTTTAAA+AGG | + | chr3.2:77422877-77422896 | None:intergenic | 25.0% |
| !! | TGATGTTGAATTTGTTTGTT+AGG | - | chr3.2:77419872-77419891 | MS.gene057186:CDS | 25.0% |
| !! | TTGAATTTGTTTGTTAGGTT+CGG | - | chr3.2:77419877-77419896 | MS.gene057186:CDS | 25.0% |
| !!! | AAGTGATGCTAGTTTTAAAT+TGG | + | chr3.2:77423169-77423188 | None:intergenic | 25.0% |
| !!! | AATTACGATTTTGAGTAAAG+AGG | - | chr3.2:77419740-77419759 | MS.gene057186:CDS | 25.0% |
| !!! | AATTTTAAGAAGGGATAGAA+AGG | - | chr3.2:77421044-77421063 | MS.gene057186:intron | 25.0% |
| !!! | AGAAGTTTGTTGTTATTTCA+TGG | - | chr3.2:77421340-77421359 | MS.gene057186:intron | 25.0% |
| !!! | ATGTAGTGCAGTTTTTAAAA+GGG | + | chr3.2:77422876-77422895 | None:intergenic | 25.0% |
| !!! | ATGTTTGCATATTTTTAAGC+TGG | - | chr3.2:77421798-77421817 | MS.gene057186:CDS | 25.0% |
| !!! | ATTGTTGATGATTAGTTAGT+CGG | - | chr3.2:77420288-77420307 | MS.gene057186:intron | 25.0% |
| !!! | GATTTTAGTACATTTAGTGT+GGG | - | chr3.2:77419899-77419918 | MS.gene057186:CDS | 25.0% |
| ACAATCTAATCACATCTTAC+CGG | + | chr3.2:77419796-77419815 | None:intergenic | 30.0% | |
| AGAACGAATAAATAGATGGT+GGG | + | chr3.2:77423457-77423476 | None:intergenic | 30.0% | |
| AGACATTCTAAATGGTTCAA+AGG | - | chr3.2:77421993-77422012 | MS.gene057186:intron | 30.0% | |
| ATCAGTAAACCATACATTTC+AGG | + | chr3.2:77422246-77422265 | None:intergenic | 30.0% | |
| ATGATATCACAATTTGTCCA+AGG | - | chr3.2:77423059-77423078 | MS.gene057186:intron | 30.0% | |
| ATGTCTGATAATTTATCCGT+TGG | - | chr3.2:77421877-77421896 | MS.gene057186:CDS | 30.0% | |
| ATTGCAATTGTAGATAGGAA+TGG | - | chr3.2:77421955-77421974 | MS.gene057186:intron | 30.0% | |
| CAACAAATTGAGATCAGTTA+TGG | - | chr3.2:77420432-77420451 | MS.gene057186:intron | 30.0% | |
| CTAAGTACATTTGTAAACAC+AGG | - | chr3.2:77420472-77420491 | MS.gene057186:intron | 30.0% | |
| CTATCATTTGTAGCCATTTA+GGG | + | chr3.2:77423660-77423679 | None:intergenic | 30.0% | |
| CTGTGTTTACAAATGTACTT+AGG | + | chr3.2:77420474-77420493 | None:intergenic | 30.0% | |
| GATCTAGAGATTTAATGAGT+TGG | - | chr3.2:77420178-77420197 | MS.gene057186:intron | 30.0% | |
| GATCTCGATTAACGTTTATT+TGG | - | chr3.2:77419587-77419606 | MS.gene057186:CDS | 30.0% | |
| GATTGTGATAGAAGTAAAGA+GGG | + | chr3.2:77423033-77423052 | None:intergenic | 30.0% | |
| GGAAGAGAAGAAATTAGAAT+GGG | - | chr3.2:77422753-77422772 | MS.gene057186:intron | 30.0% | |
| GGCTAAAACTTTCAAAACAA+AGG | + | chr3.2:77423888-77423907 | None:intergenic | 30.0% | |
| GGGTTTCTCAACAAATATAT+TGG | + | chr3.2:77422856-77422875 | None:intergenic | 30.0% | |
| GTTTATTTGGATCCAATTGA+AGG | - | chr3.2:77419600-77419619 | MS.gene057186:CDS | 30.0% | |
| TAAAAACTGCACTACATAGA+TGG | - | chr3.2:77422879-77422898 | MS.gene057186:intron | 30.0% | |
| TAAATACTATGTGAGCTCTA+CGG | + | chr3.2:77421545-77421564 | None:intergenic | 30.0% | |
| TACAAGAAACAAATTAGGCA+AGG | + | chr3.2:77420118-77420137 | None:intergenic | 30.0% | |
| TATCATTTGTAGCCATTTAG+GGG | + | chr3.2:77423659-77423678 | None:intergenic | 30.0% | |
| TCAAATAGGCAAATTATGGA+CGG | + | chr3.2:77423393-77423412 | None:intergenic | 30.0% | |
| TCAGTAAACCATACATTTCA+GGG | + | chr3.2:77422245-77422264 | None:intergenic | 30.0% | |
| TCCAAGAATTTCATCATCTT+CGG | + | chr3.2:77419933-77419952 | None:intergenic | 30.0% | |
| TCTATCATTTGTAGCCATTT+AGG | + | chr3.2:77423661-77423680 | None:intergenic | 30.0% | |
| TGAATCAACTCAAGGAAAAA+TGG | - | chr3.2:77419625-77419644 | MS.gene057186:CDS | 30.0% | |
| TGAATTGAGAGAATGTGAAT+TGG | + | chr3.2:77419455-77419474 | None:intergenic | 30.0% | |
| TGATGATTCTAGTGAAGTAT+GGG | - | chr3.2:77422524-77422543 | MS.gene057186:intron | 30.0% | |
| TGATTGTGATAGAAGTAAAG+AGG | + | chr3.2:77423034-77423053 | None:intergenic | 30.0% | |
| TGGAAGAGAAGAAATTAGAA+TGG | - | chr3.2:77422752-77422771 | MS.gene057186:intron | 30.0% | |
| TGTTCATAGTTTCCTTTACA+AGG | - | chr3.2:77420895-77420914 | MS.gene057186:intron | 30.0% | |
| TTGTATCATCAACAACCTTT+GGG | - | chr3.2:77421123-77421142 | MS.gene057186:CDS | 30.0% | |
| TTTACCAAATTATGACAGCA+AGG | + | chr3.2:77420331-77420350 | None:intergenic | 30.0% | |
| TTTGGTCAAAGCTAAATATG+TGG | + | chr3.2:77423090-77423109 | None:intergenic | 30.0% | |
| ! | AACAAATATATTGGGGTGTT+GGG | + | chr3.2:77422847-77422866 | None:intergenic | 30.0% |
| ! | ACTAATTTTCGAAGTCTCTT+CGG | + | chr3.2:77419666-77419685 | None:intergenic | 30.0% |
| ! | ATATTGCTTGTTCAAGTTCT+TGG | - | chr3.2:77421573-77421592 | MS.gene057186:CDS | 30.0% |
| ! | CTACTTCTGAGAATCTATAA+TGG | + | chr3.2:77422500-77422519 | None:intergenic | 30.0% |
| ! | GTTTTATGGATTTTACTTGG+TGG | - | chr3.2:77421920-77421939 | MS.gene057186:intron | 30.0% |
| ! | TAAATCTTTTGCGGGTTTTA+TGG | - | chr3.2:77421906-77421925 | MS.gene057186:CDS | 30.0% |
| ! | TCCATAATTTGCCTATTTGA+GGG | - | chr3.2:77423393-77423412 | MS.gene057186:intron | 30.0% |
| ! | TTTTATGCCAAAGAGAAACA+TGG | + | chr3.2:77421633-77421652 | None:intergenic | 30.0% |
| !! | ATCGTTGAATTTCACTTTTC+AGG | - | chr3.2:77419474-77419493 | MS.gene057186:CDS | 30.0% |
| !! | ATTTTTAAGCTGGACAAAGA+AGG | - | chr3.2:77421808-77421827 | MS.gene057186:CDS | 30.0% |
| !! | CTAAGTTTTGACATTGTTTG+AGG | - | chr3.2:77420373-77420392 | MS.gene057186:intron | 30.0% |
| !! | GGATTTTAGTACATTTAGTG+TGG | - | chr3.2:77419898-77419917 | MS.gene057186:CDS | 30.0% |
| !!! | GAGCTATGTTCTGAATTTTT+TGG | + | chr3.2:77423108-77423127 | None:intergenic | 30.0% |
| AAAATATCTGCGCCTATTGT+AGG | - | chr3.2:77420031-77420050 | MS.gene057186:intron | 35.0% | |
| AAATCTGTCCCTGAAATGTA+TGG | - | chr3.2:77422234-77422253 | MS.gene057186:intron | 35.0% | |
| AACTAATTAGGTGAAAGGCT+AGG | + | chr3.2:77421008-77421027 | None:intergenic | 35.0% | |
| AATTGTAGATAGGAATGGTG+TGG | - | chr3.2:77421960-77421979 | MS.gene057186:intron | 35.0% | |
| ACAAAGGGAGACAAAGAATA+TGG | + | chr3.2:77423872-77423891 | None:intergenic | 35.0% | |
| ACAAATGTACTTAGGAAAGG+TGG | + | chr3.2:77420466-77420485 | None:intergenic | 35.0% | |
| ACAGTTCCTATCCAAATGTA+TGG | - | chr3.2:77423920-77423939 | MS.gene057186:intron | 35.0% | |
| ACTAATTAGGTGAAAGGCTA+GGG | + | chr3.2:77421007-77421026 | None:intergenic | 35.0% | |
| ATCACTTAACTCACAGATCA+GGG | - | chr3.2:77423182-77423201 | MS.gene057186:CDS | 35.0% | |
| ATGTGAATTGGAATTGAGAG+AGG | + | chr3.2:77419443-77419462 | None:intergenic | 35.0% | |
| ATTGCAACTCTGGATTTAAC+AGG | - | chr3.2:77421775-77421794 | MS.gene057186:CDS | 35.0% | |
| ATTTGGATAGGAACTGTTTC+TGG | + | chr3.2:77423917-77423936 | None:intergenic | 35.0% | |
| CAAAAAGGTTAAGTTCATGG+TGG | + | chr3.2:77420533-77420552 | None:intergenic | 35.0% | |
| CAAATTGAGATCAGTTATGG+AGG | - | chr3.2:77420435-77420454 | MS.gene057186:intron | 35.0% | |
| CAACAAATATATTGGGGTGT+TGG | + | chr3.2:77422848-77422867 | None:intergenic | 35.0% | |
| CAGAACGAATAAATAGATGG+TGG | + | chr3.2:77423458-77423477 | None:intergenic | 35.0% | |
| CAGGAAACAAATTGAAAGCA+AGG | - | chr3.2:77420926-77420945 | MS.gene057186:intron | 35.0% | |
| CAGTTCCTATCCAAATGTAT+GGG | - | chr3.2:77423921-77423940 | MS.gene057186:intron | 35.0% | |
| CCAAGAAAATGCTTAACAAG+AGG | + | chr3.2:77424082-77424101 | None:intergenic | 35.0% | |
| CCTTTACAAGGTTTGAAAAC+AGG | - | chr3.2:77420907-77420926 | MS.gene057186:intron | 35.0% | |
| CTGCAAAAAGGTTAAGTTCA+TGG | + | chr3.2:77420536-77420555 | None:intergenic | 35.0% | |
| CTGCAAACTAATTAGGTGAA+AGG | + | chr3.2:77421013-77421032 | None:intergenic | 35.0% | |
| CTTCGTTAATAGGCATACTA+CGG | + | chr3.2:77423787-77423806 | None:intergenic | 35.0% | |
| CTTGTATCATCAACAACCTT+TGG | - | chr3.2:77421122-77421141 | MS.gene057186:CDS | 35.0% | |
| GAACGAATAAATAGATGGTG+GGG | + | chr3.2:77423456-77423475 | None:intergenic | 35.0% | |
| GACTGAACTGCAAACTAATT+AGG | + | chr3.2:77421020-77421039 | None:intergenic | 35.0% | |
| GAGAAGAAATTAGAATGGGT+TGG | - | chr3.2:77422757-77422776 | MS.gene057186:intron | 35.0% | |
| GTATTCTCTTTGCAGTTTGA+GGG | - | chr3.2:77421676-77421695 | MS.gene057186:CDS | 35.0% | |
| GTGATGATTCTAGTGAAGTA+TGG | - | chr3.2:77422523-77422542 | MS.gene057186:intron | 35.0% | |
| TAAATATCGCAGCAAAAGCA+TGG | + | chr3.2:77422671-77422690 | None:intergenic | 35.0% | |
| TCATAGAGTTAAAGGACTGA+AGG | + | chr3.2:77423521-77423540 | None:intergenic | 35.0% | |
| TCCCTCAAATAGGCAAATTA+TGG | + | chr3.2:77423397-77423416 | None:intergenic | 35.0% | |
| TCCGAAGATGATGAAATTCT+TGG | - | chr3.2:77419929-77419948 | MS.gene057186:CDS | 35.0% | |
| TCGTACATAAAAGTGACAAC+AGG | - | chr3.2:77420957-77420976 | MS.gene057186:intron | 35.0% | |
| TCTAAATGGTTCAAAGGTTC+AGG | - | chr3.2:77421999-77422018 | MS.gene057186:intron | 35.0% | |
| TCTGATAATTTATCCGTTGG+CGG | - | chr3.2:77421880-77421899 | MS.gene057186:CDS | 35.0% | |
| TGAGCTCTCAAAATGGTATA+TGG | - | chr3.2:77424123-77424142 | MS.gene057186:intron | 35.0% | |
| TGTGGCAGAAATTACAAAGA+AGG | - | chr3.2:77420003-77420022 | MS.gene057186:intron | 35.0% | |
| TTCACTGTCATTACATCTGA+TGG | - | chr3.2:77420402-77420421 | MS.gene057186:intron | 35.0% | |
| TTCAGAACATAGCTCAAGTA+AGG | - | chr3.2:77423113-77423132 | MS.gene057186:intron | 35.0% | |
| TTGCTAAGTTACTCAAGTGT+TGG | - | chr3.2:77420606-77420625 | MS.gene057186:intron | 35.0% | |
| ! | AAGTCTGGTATGTGTGTTTT+GGG | - | chr3.2:77420567-77420586 | MS.gene057186:intron | 35.0% |
| ! | AATATGAGTCTTGTCATGTG+GGG | - | chr3.2:77424313-77424332 | MS.gene057186:intron | 35.0% |
| ! | AGAGCTATGGATGATTTTAG+CGG | - | chr3.2:77424154-77424173 | MS.gene057186:intron | 35.0% |
| ! | AGCATTTTCTTGGACTTCTT+TGG | - | chr3.2:77424089-77424108 | MS.gene057186:CDS | 35.0% |
| ! | AGCTGACCTTTATAACCTTT+TGG | + | chr3.2:77421715-77421734 | None:intergenic | 35.0% |
| ! | AGCTTTTGAGCAAGAATTAC+AGG | - | chr3.2:77423621-77423640 | MS.gene057186:intron | 35.0% |
| ! | AGTTGATTCACACCTTCAAT+TGG | + | chr3.2:77419615-77419634 | None:intergenic | 35.0% |
| ! | ATGTCCTTGCTGTCATAATT+TGG | - | chr3.2:77420324-77420343 | MS.gene057186:intron | 35.0% |
| ! | CAATATGAGTCTTGTCATGT+GGG | - | chr3.2:77424312-77424331 | MS.gene057186:intron | 35.0% |
| ! | CCTCTTGTTAAGCATTTTCT+TGG | - | chr3.2:77424079-77424098 | MS.gene057186:CDS | 35.0% |
| ! | CCTGTTTTCAAACCTTGTAA+AGG | + | chr3.2:77420910-77420929 | None:intergenic | 35.0% |
| ! | GTCCATAATTTGCCTATTTG+AGG | - | chr3.2:77423392-77423411 | MS.gene057186:intron | 35.0% |
| ! | TAAGGATGCTTTTACTGTGT+AGG | + | chr3.2:77422933-77422952 | None:intergenic | 35.0% |
| ! | TCAATATGAGTCTTGTCATG+TGG | - | chr3.2:77424311-77424330 | MS.gene057186:intron | 35.0% |
| ! | TTTGACATTGTTTGAGGTGT+AGG | - | chr3.2:77420379-77420398 | MS.gene057186:intron | 35.0% |
| ! | TTTGGATAGGAACTGTTTCT+GGG | + | chr3.2:77423916-77423935 | None:intergenic | 35.0% |
| !! | CGGGTTTTATGGATTTTACT+TGG | - | chr3.2:77421917-77421936 | MS.gene057186:intron | 35.0% |
| !! | TGATAGTCATGGATTGGATA+AGG | - | chr3.2:77422302-77422321 | MS.gene057186:intron | 35.0% |
| AAAAGATTTACCACCGCCAA+CGG | + | chr3.2:77421896-77421915 | None:intergenic | 40.0% | |
| AAAGGTTAAGTTCATGGTGG+CGG | + | chr3.2:77420530-77420549 | None:intergenic | 40.0% | |
| AACATTCTGCTCCCTCAAAT+AGG | + | chr3.2:77423407-77423426 | None:intergenic | 40.0% | |
| AAGAAGAGACACGCAAGAAA+AGG | + | chr3.2:77421458-77421477 | None:intergenic | 40.0% | |
| AAGTGAGAGAAGAGAAAGCA+AGG | + | chr3.2:77419521-77419540 | None:intergenic | 40.0% | |
| ACACTCTCCCAATTTGTCTT+GGG | - | chr3.2:77421835-77421854 | MS.gene057186:CDS | 40.0% | |
| AGACACGCAAGAAAAGGATA+AGG | + | chr3.2:77421452-77421471 | None:intergenic | 40.0% | |
| AGAGCAGGGAAAAAATATGC+AGG | + | chr3.2:77422033-77422052 | None:intergenic | 40.0% | |
| ATCAGGGTAAATAGCTCACA+TGG | - | chr3.2:77423198-77423217 | MS.gene057186:CDS | 40.0% | |
| ATCCAGAGTTGCAATGAATG+TGG | + | chr3.2:77421770-77421789 | None:intergenic | 40.0% | |
| ATTCCGTAACCGAATTCGTT+CGG | + | chr3.2:77419561-77419580 | None:intergenic | 40.0% | |
| CAAAGCAGTAAACGTTGTTG+CGG | + | chr3.2:77420506-77420525 | None:intergenic | 40.0% | |
| CAATCGATGAGCTCTCAAAA+TGG | - | chr3.2:77424116-77424135 | MS.gene057186:intron | 40.0% | |
| CAGATTGGATTGTTGAAGAC+AGG | - | chr3.2:77422157-77422176 | MS.gene057186:intron | 40.0% | |
| CAGTGGTTGAATTCTAGTCA+AGG | - | chr3.2:77422342-77422361 | MS.gene057186:intron | 40.0% | |
| CATACACATAGTCCCCTAAA+TGG | - | chr3.2:77423644-77423663 | MS.gene057186:CDS | 40.0% | |
| CATCACTTAACTCACAGATC+AGG | - | chr3.2:77423181-77423200 | MS.gene057186:CDS | 40.0% | |
| CGTACTTTACCGAACGAATT+CGG | - | chr3.2:77419549-77419568 | MS.gene057186:CDS | 40.0% | |
| CTAAATATGTGGCATGTCCT+TGG | + | chr3.2:77423079-77423098 | None:intergenic | 40.0% | |
| CTAGACTTTGCTGATAGTCA+TGG | - | chr3.2:77422291-77422310 | MS.gene057186:intron | 40.0% | |
| CTTCAACAATCCAATCTGTC+TGG | + | chr3.2:77422155-77422174 | None:intergenic | 40.0% | |
| CTTGCAGAAAGTGGGAAAAT+TGG | - | chr3.2:77423818-77423837 | MS.gene057186:CDS | 40.0% | |
| CTTTGCTGATAGTCATGGAT+TGG | - | chr3.2:77422296-77422315 | MS.gene057186:intron | 40.0% | |
| GATATAAGCTCTCTTTCCCT+CGG | - | chr3.2:77420667-77420686 | MS.gene057186:intron | 40.0% | |
| GATCTTGCCATGTTTCTCTT+TGG | - | chr3.2:77421623-77421642 | MS.gene057186:CDS | 40.0% | |
| GCAAGTATAAGACATCCTGA+TGG | + | chr3.2:77424249-77424268 | None:intergenic | 40.0% | |
| GGAGCAGAATGTTGAACAAA+TGG | - | chr3.2:77423414-77423433 | MS.gene057186:intron | 40.0% | |
| GGTATTCTCTTTGCAGTTTG+AGG | - | chr3.2:77421675-77421694 | MS.gene057186:CDS | 40.0% | |
| GTACATTTAGTGTGGGAGAT+TGG | - | chr3.2:77419906-77419925 | MS.gene057186:CDS | 40.0% | |
| GTCAATGAACTTTGAGTCAG+TGG | + | chr3.2:77423723-77423742 | None:intergenic | 40.0% | |
| TAAAACTTCAAGCACAGACC+TGG | - | chr3.2:77421648-77421667 | MS.gene057186:CDS | 40.0% | |
| TACACTCTCCCAATTTGTCT+TGG | - | chr3.2:77421834-77421853 | MS.gene057186:CDS | 40.0% | |
| TATCTTTCTGCTGCATGACT+AGG | - | chr3.2:77421303-77421322 | MS.gene057186:intron | 40.0% | |
| TATGGATAGAGCTAGAGCTA+TGG | - | chr3.2:77424141-77424160 | MS.gene057186:intron | 40.0% | |
| TCAGGCAAACGAAGATTCAA+AGG | - | chr3.2:77419492-77419511 | MS.gene057186:CDS | 40.0% | |
| TCCTCTGACAATGCAAAATC+AGG | + | chr3.2:77422126-77422145 | None:intergenic | 40.0% | |
| TCTCGAAGTAAACAAGTCCT+TGG | + | chr3.2:77420791-77420810 | None:intergenic | 40.0% | |
| TGACAATGCAAAATCAGGAC+TGG | + | chr3.2:77422121-77422140 | None:intergenic | 40.0% | |
| TGGAAACTTCAAGCAGAGTA+TGG | + | chr3.2:77421178-77421197 | None:intergenic | 40.0% | |
| TGTTGAACAAATGGTCAAGC+TGG | - | chr3.2:77423423-77423442 | MS.gene057186:intron | 40.0% | |
| TTACCGAACGAATTCGGTTA+CGG | - | chr3.2:77419555-77419574 | MS.gene057186:CDS | 40.0% | |
| TTCTTGGAATAAACATGGGC+AGG | - | chr3.2:77422601-77422620 | MS.gene057186:intron | 40.0% | |
| TTTGCAATATAAGGACAGGC+TGG | - | chr3.2:77422572-77422591 | MS.gene057186:intron | 40.0% | |
| ! | AGTCTGGTATGTGTGTTTTG+GGG | - | chr3.2:77420568-77420587 | MS.gene057186:intron | 40.0% |
| ! | ATATGAGTCTTGTCATGTGG+GGG | - | chr3.2:77424314-77424333 | MS.gene057186:intron | 40.0% |
| ! | GAAGTCTGGTATGTGTGTTT+TGG | - | chr3.2:77420566-77420585 | MS.gene057186:intron | 40.0% |
| ! | GACGACAATGATAGTGAAAC+AGG | - | chr3.2:77424286-77424305 | MS.gene057186:intron | 40.0% |
| ! | GCTTTTACTGTGTAGGAACT+GGG | + | chr3.2:77422926-77422945 | None:intergenic | 40.0% |
| ! | TAGTGTCCTTGTTTGTTTCG+CGG | - | chr3.2:77419682-77419701 | MS.gene057186:CDS | 40.0% |
| ! | TCATTGACACAGTTTTCTGC+AGG | - | chr3.2:77423735-77423754 | MS.gene057186:CDS | 40.0% |
| ! | TCCTGATTTTGCATTGTCAG+AGG | - | chr3.2:77422122-77422141 | MS.gene057186:intron | 40.0% |
| ! | TGAAGGTGTGAATCAACTCA+AGG | - | chr3.2:77419617-77419636 | MS.gene057186:CDS | 40.0% |
| ! | TGCTTTTACTGTGTAGGAAC+TGG | + | chr3.2:77422927-77422946 | None:intergenic | 40.0% |
| ! | TTTGAGAGCTCATCGATTGA+TGG | + | chr3.2:77424115-77424134 | None:intergenic | 40.0% |
| !! | ATGAAGTTCTGAAGTCACAG+TGG | - | chr3.2:77422325-77422344 | MS.gene057186:intron | 40.0% |
| !! | ATGATTGGGTTGAATGCAAG+AGG | - | chr3.2:77423993-77424012 | MS.gene057186:CDS | 40.0% |
| !! | GAGCTATGGATGATTTTAGC+GGG | - | chr3.2:77424155-77424174 | MS.gene057186:intron | 40.0% |
| !! | TATTGACCTGGTGTTGTTGT+TGG | + | chr3.2:77419408-77419427 | None:intergenic | 40.0% |
| !!! | GCATATTTTTTCCCTGCTCT+GGG | - | chr3.2:77422033-77422052 | MS.gene057186:intron | 40.0% |
| !!! | TGCATATTTTTTCCCTGCTC+TGG | - | chr3.2:77422032-77422051 | MS.gene057186:intron | 40.0% |
| AAAGCCTTCTCCACTAAGTG+GGG | + | chr3.2:77420259-77420278 | None:intergenic | 45.0% | |
| AAATACGTTGCAGTTGCTGC+GGG | - | chr3.2:77419711-77419730 | MS.gene057186:CDS | 45.0% | |
| AATTTCTGCCACAACTTCGC+CGG | + | chr3.2:77419996-77420015 | None:intergenic | 45.0% | |
| ACAAAGCCTTCTCCACTAAG+TGG | + | chr3.2:77420261-77420280 | None:intergenic | 45.0% | |
| ACCAACAGAAGATGCTGTGA+CGG | - | chr3.2:77422443-77422462 | MS.gene057186:intron | 45.0% | |
| AGCCACATTCATTGCAACTC+TGG | - | chr3.2:77421765-77421784 | MS.gene057186:CDS | 45.0% | |
| AGCTGCCCATACATTTGGAT+AGG | + | chr3.2:77423929-77423948 | None:intergenic | 45.0% | |
| CAAAGCCTTCTCCACTAAGT+GGG | + | chr3.2:77420260-77420279 | None:intergenic | 45.0% | |
| CCAATTTGTCTTGGGAGAGA+GGG | - | chr3.2:77421843-77421862 | MS.gene057186:CDS | 45.0% | |
| CCTCTCTCCCAAGACAAATT+GGG | + | chr3.2:77421845-77421864 | None:intergenic | 45.0% | |
| CTGGGACAAGATTGAGTTCA+TGG | + | chr3.2:77422908-77422927 | None:intergenic | 45.0% | |
| CTGTAGCACTTGCAGAAAGT+GGG | - | chr3.2:77423810-77423829 | MS.gene057186:CDS | 45.0% | |
| CTTTCTCTTCTCTCACTTCG+AGG | - | chr3.2:77419523-77419542 | MS.gene057186:CDS | 45.0% | |
| GAAATACGTTGCAGTTGCTG+CGG | - | chr3.2:77419710-77419729 | MS.gene057186:CDS | 45.0% | |
| GAAGAAGCTGCCCATACATT+TGG | + | chr3.2:77423934-77423953 | None:intergenic | 45.0% | |
| GAAGTAAAGAGGGAACAGTC+TGG | + | chr3.2:77423023-77423042 | None:intergenic | 45.0% | |
| GACAGGCTGGAAACATTTCT+TGG | - | chr3.2:77422585-77422604 | MS.gene057186:intron | 45.0% | |
| GATAATTTATCCGTTGGCGG+TGG | - | chr3.2:77421883-77421902 | MS.gene057186:CDS | 45.0% | |
| GCTACAGCAGCTTCGTTAAT+AGG | + | chr3.2:77423797-77423816 | None:intergenic | 45.0% | |
| GCTCACATGGAACCTAAAGT+AGG | - | chr3.2:77423211-77423230 | MS.gene057186:CDS | 45.0% | |
| GTTGCAATGAATGTGGCTTG+TGG | + | chr3.2:77421763-77421782 | None:intergenic | 45.0% | |
| TAAATTCACCGGCGAAGTTG+TGG | - | chr3.2:77419985-77420004 | MS.gene057186:intron | 45.0% | |
| TCCATTGATGCTAGAAGCCA+AGG | - | chr3.2:77420771-77420790 | MS.gene057186:intron | 45.0% | |
| TCCTTGGCTTCTAGCATCAA+TGG | + | chr3.2:77420775-77420794 | None:intergenic | 45.0% | |
| TCGTGTGAACAGCTGCAAAA+AGG | + | chr3.2:77420548-77420567 | None:intergenic | 45.0% | |
| TGAAGTATGGGATGTTCGCT+TGG | - | chr3.2:77422536-77422555 | MS.gene057186:intron | 45.0% | |
| TGCGAAGAGCAAACTCAAGT+AGG | + | chr3.2:77424201-77424220 | None:intergenic | 45.0% | |
| TGCTGTGAGGCAAGATGATT+GGG | - | chr3.2:77423979-77423998 | MS.gene057186:CDS | 45.0% | |
| TGGTTCAAAGGTTCAGGAAG+AGG | - | chr3.2:77422005-77422024 | MS.gene057186:intron | 45.0% | |
| TGTGGCGAGATTAGTAGCTT+TGG | + | chr3.2:77421745-77421764 | None:intergenic | 45.0% | |
| TTCACCTTTCTAGGTTGCTC+TGG | - | chr3.2:77422190-77422209 | MS.gene057186:intron | 45.0% | |
| TTGCTGTGAGGCAAGATGAT+TGG | - | chr3.2:77423978-77423997 | MS.gene057186:CDS | 45.0% | |
| ! | CTTGAGTTTGCTCTTCGCAA+AGG | - | chr3.2:77424202-77424221 | MS.gene057186:CDS | 45.0% |
| ! | GGAAGAGCACAGAAATGTAG+GGG | - | chr3.2:77422054-77422073 | MS.gene057186:intron | 45.0% |
| ! | GGGAAGAGCACAGAAATGTA+GGG | - | chr3.2:77422053-77422072 | MS.gene057186:intron | 45.0% |
| ! | TGGCGGTGGTAAATCTTTTG+CGG | - | chr3.2:77421897-77421916 | MS.gene057186:CDS | 45.0% |
| ! | TGGGAAGAGCACAGAAATGT+AGG | - | chr3.2:77422052-77422071 | MS.gene057186:intron | 45.0% |
| ! | TTTCTGCAGGTTTTCTGTGC+AGG | - | chr3.2:77423748-77423767 | MS.gene057186:CDS | 45.0% |
| !! | AGGAACTGTTTCTGGGATAG+AGG | + | chr3.2:77423909-77423928 | None:intergenic | 45.0% |
| !! | TGTTGTTGTTGGTGGTGTTG+AGG | + | chr3.2:77419397-77419416 | None:intergenic | 45.0% |
| !! | TTGGGTTGAATGCAAGAGGA+TGG | - | chr3.2:77423997-77424016 | MS.gene057186:CDS | 45.0% |
| !!! | AAATGAAATTAATATATTTT+TGG | - | chr3.2:77422368-77422387 | MS.gene057186:intron | 5.0% |
| ACACCACCAACAACAACACC+AGG | - | chr3.2:77419399-77419418 | MS.gene057186:CDS | 50.0% | |
| ATGTATGGGCAGCTTCTTCC+TGG | - | chr3.2:77423935-77423954 | MS.gene057186:intron | 50.0% | |
| CCCAATTTGTCTTGGGAGAG+AGG | - | chr3.2:77421842-77421861 | MS.gene057186:CDS | 50.0% | |
| CCCTCTCTCCCAAGACAAAT+TGG | + | chr3.2:77421846-77421865 | None:intergenic | 50.0% | |
| CTGCAAGCAACTCAACCCAA+AGG | + | chr3.2:77421141-77421160 | None:intergenic | 50.0% | |
| GAGCAAACTCAAGTAGGCTC+AGG | + | chr3.2:77424195-77424214 | None:intergenic | 50.0% | |
| GCAAAGAGAATACCTGCTCC+AGG | + | chr3.2:77421669-77421688 | None:intergenic | 50.0% | |
| GCTGTAGCACTTGCAGAAAG+TGG | - | chr3.2:77423809-77423828 | MS.gene057186:CDS | 50.0% | |
| GGAACCAGAGCAACCTAGAA+AGG | + | chr3.2:77422197-77422216 | None:intergenic | 50.0% | |
| GTAAAGAGGGAACAGTCTGG+TGG | + | chr3.2:77423020-77423039 | None:intergenic | 50.0% | |
| TCTCTTTCCCTCGGACTACT+GGG | - | chr3.2:77420676-77420695 | MS.gene057186:intron | 50.0% | |
| TGACGTTGCGTTTCGTAGAG+TGG | + | chr3.2:77419358-77419377 | None:intergenic | 50.0% | |
| TGAGTTGCAGCAGTTCCATC+AGG | - | chr3.2:77424231-77424250 | MS.gene057186:intron | 50.0% | |
| TGTATGGGCAGCTTCTTCCT+GGG | - | chr3.2:77423936-77423955 | MS.gene057186:intron | 50.0% | |
| ! | CAATCCAATCTGTCTGGAGC+AGG | + | chr3.2:77422149-77422168 | None:intergenic | 50.0% |
| ! | GGCGGTGGTAAATCTTTTGC+GGG | - | chr3.2:77421898-77421917 | MS.gene057186:CDS | 50.0% |
| ! | GTGGTGTTGAGGAGGGTAAT+TGG | + | chr3.2:77419386-77419405 | None:intergenic | 50.0% |
| !! | GTTGTTGGTGGTGTTGAGGA+GGG | + | chr3.2:77419393-77419412 | None:intergenic | 50.0% |
| !! | TGACCTGGTGTTGTTGTTGG+TGG | + | chr3.2:77419405-77419424 | None:intergenic | 50.0% |
| !! | TGTTGTTGGTGGTGTTGAGG+AGG | + | chr3.2:77419394-77419413 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3.2:77420247-77420266 | None:intergenic | 55.0% | |
| AGATGCTGTGACGGCTTTGC+TGG | - | chr3.2:77422452-77422471 | MS.gene057186:intron | 55.0% | |
| AGGACCTGCTCCAGACAGAT+TGG | - | chr3.2:77422142-77422161 | MS.gene057186:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3.2:77420246-77420265 | MS.gene057186:intron | 55.0% | |
| CCTTCTCCACTAAGTGGGGT+CGG | + | chr3.2:77420255-77420274 | None:intergenic | 55.0% | |
| CGCAGTCCGCGAAACAAACA+AGG | + | chr3.2:77419691-77419710 | None:intergenic | 55.0% | |
| CTCTCTTTCCCTCGGACTAC+TGG | - | chr3.2:77420675-77420694 | MS.gene057186:intron | 55.0% | |
| GCAGCTGTTCACACGAAGTC+TGG | - | chr3.2:77420552-77420571 | MS.gene057186:intron | 55.0% | |
| GCCGTCACAGCATCTTCTGT+TGG | + | chr3.2:77422447-77422466 | None:intergenic | 55.0% | |
| TCTGTGCTCTTCCCAGAGCA+GGG | + | chr3.2:77422047-77422066 | None:intergenic | 55.0% | |
| TGCCTCACAGCAACACCAGA+CGG | + | chr3.2:77423971-77423990 | None:intergenic | 55.0% | |
| TTCAAGCACAGACCTGGAGC+AGG | - | chr3.2:77421654-77421673 | MS.gene057186:CDS | 55.0% | |
| TTCTGTGCTCTTCCCAGAGC+AGG | + | chr3.2:77422048-77422067 | None:intergenic | 55.0% | |
| TTTCCCTCGGACTACTGGGT+TGG | - | chr3.2:77420680-77420699 | MS.gene057186:intron | 55.0% | |
| !! | GTGACGGCTTTGCTGGCTTA+TGG | - | chr3.2:77422459-77422478 | MS.gene057186:intron | 55.0% |
| !! | TTCCGTCTGGTGTTGCTGTG+AGG | - | chr3.2:77423966-77423985 | MS.gene057186:CDS | 55.0% |
| AGCACCAACCCAGTAGTCCG+AGG | + | chr3.2:77420687-77420706 | None:intergenic | 60.0% | |
| ATGGGCAGCTTCTTCCTGGG+AGG | - | chr3.2:77423939-77423958 | MS.gene057186:intron | 60.0% | |
| CCAGACGGAAAAGACCTCCC+AGG | + | chr3.2:77423956-77423975 | None:intergenic | 60.0% | |
| CCGACCCCACTTAGTGGAGA+AGG | - | chr3.2:77420252-77420271 | MS.gene057186:intron | 60.0% | |
| GCACCAACCCAGTAGTCCGA+GGG | + | chr3.2:77420686-77420705 | None:intergenic | 60.0% | |
| ! | CCTGGGAGGTCTTTTCCGTC+TGG | - | chr3.2:77423953-77423972 | MS.gene057186:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77419346 | 77424396 | 77419346 | ID=MS.gene057186 |
| chr3.2 | mRNA | 77419346 | 77424396 | 77419346 | ID=MS.gene057186.t1;Parent=MS.gene057186 |
| chr3.2 | exon | 77424322 | 77424396 | 77424322 | ID=MS.gene057186.t1.exon1;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77424322 | 77424396 | 77424322 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77424198 | 77424246 | 77424198 | ID=MS.gene057186.t1.exon2;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77424198 | 77424246 | 77424198 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77423947 | 77424120 | 77423947 | ID=MS.gene057186.t1.exon3;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77423947 | 77424120 | 77423947 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77423644 | 77423848 | 77423644 | ID=MS.gene057186.t1.exon4;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77423644 | 77423848 | 77423644 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77423169 | 77423341 | 77423169 | ID=MS.gene057186.t1.exon5;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77423169 | 77423341 | 77423169 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77422067 | 77422119 | 77422067 | ID=MS.gene057186.t1.exon6;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77422067 | 77422119 | 77422067 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77421405 | 77421925 | 77421405 | ID=MS.gene057186.t1.exon7;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77421405 | 77421925 | 77421405 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77421120 | 77421305 | 77421120 | ID=MS.gene057186.t1.exon8;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77421120 | 77421305 | 77421120 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| chr3.2 | exon | 77419346 | 77419985 | 77419346 | ID=MS.gene057186.t1.exon9;Parent=MS.gene057186.t1 |
| chr3.2 | CDS | 77419346 | 77419985 | 77419346 | ID=cds.MS.gene057186.t1;Parent=MS.gene057186.t1 |
| Gene Sequence |
| Protein sequence |
