Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057344.t1 | XP_003600894.1 | 93.9 | 578 | 29 | 1 | 1 | 572 | 1 | 578 | 0.00E+00 | 1098.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057344.t1 | Q8GV43 | 51.0 | 580 | 252 | 7 | 7 | 564 | 20 | 589 | 1.2e-162 | 574.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057344.t1 | G7JB93 | 93.9 | 578 | 29 | 1 | 1 | 572 | 1 | 578 | 0.0e+00 | 1098.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055386 | MS.gene057344 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene057344 | MS.gene39046 | 0.806699 | 7.24E-50 | -1.69E-46 |
| MS.gene057344 | MS.gene69226 | 0.848192 | 7.17E-60 | -1.69E-46 |
| MS.gene057344 | MS.gene69239 | 0.807724 | 4.39E-50 | -1.69E-46 |
| MS.gene057344 | MS.gene84703 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene057344 | MS.gene94231 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene057344 | MS.gene99860 | 0.826295 | 2.93E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057344.t1 | MTR_3g070560 | 94.271 | 576 | 27 | 1 | 1 | 570 | 1 | 576 | 0.0 | 1104 |
| MS.gene057344.t1 | MTR_3g070710 | 83.420 | 579 | 87 | 3 | 1 | 572 | 1 | 577 | 0.0 | 987 |
| MS.gene057344.t1 | MTR_3g070560 | 93.564 | 404 | 20 | 1 | 175 | 572 | 2 | 405 | 0.0 | 798 |
| MS.gene057344.t1 | MTR_5g082590 | 60.656 | 549 | 201 | 6 | 23 | 564 | 18 | 558 | 0.0 | 682 |
| MS.gene057344.t1 | MTR_5g082580 | 59.028 | 576 | 214 | 10 | 7 | 564 | 12 | 583 | 0.0 | 657 |
| MS.gene057344.t1 | MTR_5g071010 | 52.105 | 570 | 245 | 11 | 24 | 572 | 22 | 584 | 0.0 | 583 |
| MS.gene057344.t1 | MTR_5g082620 | 49.831 | 590 | 273 | 10 | 1 | 577 | 1 | 580 | 0.0 | 568 |
| MS.gene057344.t1 | MTR_3g070720 | 49.488 | 586 | 273 | 9 | 2 | 572 | 6 | 583 | 0.0 | 547 |
| MS.gene057344.t1 | MTR_3g069280 | 50.260 | 577 | 255 | 9 | 12 | 572 | 2 | 562 | 0.0 | 546 |
| MS.gene057344.t1 | MTR_5g071040 | 45.679 | 567 | 269 | 13 | 3 | 564 | 17 | 549 | 3.80e-162 | 475 |
| MS.gene057344.t1 | MTR_3g070720 | 48.703 | 501 | 241 | 7 | 2 | 494 | 6 | 498 | 1.36e-160 | 468 |
| MS.gene057344.t1 | MTR_3g070720 | 46.998 | 483 | 240 | 7 | 2 | 476 | 6 | 480 | 7.58e-144 | 425 |
| MS.gene057344.t1 | MTR_3g070720 | 45.107 | 419 | 214 | 7 | 2 | 412 | 6 | 416 | 2.11e-114 | 347 |
| MS.gene057344.t1 | MTR_3g070730 | 70.175 | 57 | 17 | 0 | 491 | 547 | 4 | 60 | 2.28e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057344.t1 | AT2G40116 | 51.724 | 580 | 248 | 9 | 7 | 564 | 20 | 589 | 0.0 | 594 |
| MS.gene057344.t1 | AT3G08510 | 50.086 | 581 | 267 | 11 | 1 | 570 | 1 | 569 | 0.0 | 559 |
| MS.gene057344.t1 | AT3G08510 | 50.086 | 581 | 267 | 11 | 1 | 570 | 1 | 569 | 0.0 | 559 |
| MS.gene057344.t1 | AT5G58690 | 50.271 | 553 | 261 | 5 | 13 | 564 | 15 | 554 | 0.0 | 555 |
| MS.gene057344.t1 | AT5G58690 | 50.271 | 553 | 261 | 5 | 13 | 564 | 15 | 554 | 0.0 | 555 |
| MS.gene057344.t1 | AT5G58700 | 49.225 | 581 | 276 | 7 | 7 | 572 | 11 | 587 | 0.0 | 554 |
| MS.gene057344.t1 | AT5G58700 | 49.225 | 581 | 276 | 7 | 7 | 572 | 11 | 587 | 0.0 | 554 |
| MS.gene057344.t1 | AT5G58690 | 50.547 | 548 | 257 | 5 | 18 | 564 | 1 | 535 | 0.0 | 553 |
| MS.gene057344.t1 | AT3G55940 | 49.393 | 577 | 262 | 11 | 1 | 564 | 1 | 560 | 0.0 | 553 |
| MS.gene057344.t1 | AT5G58700 | 53.445 | 479 | 205 | 6 | 109 | 572 | 4 | 479 | 4.95e-176 | 507 |
| MS.gene057344.t1 | AT5G58670 | 47.880 | 566 | 259 | 10 | 3 | 564 | 2 | 535 | 2.18e-172 | 500 |
| MS.gene057344.t1 | AT3G08510 | 46.816 | 581 | 257 | 12 | 1 | 570 | 1 | 540 | 2.39e-172 | 500 |
| MS.gene057344.t1 | AT3G08510 | 46.816 | 581 | 257 | 12 | 1 | 570 | 1 | 540 | 2.39e-172 | 500 |
| MS.gene057344.t1 | AT4G38530 | 46.454 | 564 | 263 | 12 | 6 | 564 | 5 | 534 | 1.96e-168 | 491 |
| MS.gene057344.t1 | AT3G47290 | 40.541 | 481 | 229 | 9 | 87 | 564 | 81 | 507 | 3.06e-108 | 335 |
| MS.gene057344.t1 | AT3G47290 | 40.541 | 481 | 229 | 9 | 87 | 564 | 81 | 507 | 1.07e-107 | 335 |
| MS.gene057344.t1 | AT3G47220 | 39.876 | 484 | 227 | 15 | 87 | 564 | 82 | 507 | 4.04e-96 | 303 |
Find 109 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTAATTGAACTTGATTTA+TGG | 0.148872 | 3.1:+57867852 | MS.gene057344:CDS |
| TGGACAATTGGTATCCTATT+TGG | 0.164917 | 3.1:+57870034 | MS.gene057344:CDS |
| AGAACAAAATTGCACCTTAT+TGG | 0.178097 | 3.1:+57865768 | MS.gene057344:CDS |
| TGTTTCAAAGCCTCTATAAT+TGG | 0.221396 | 3.1:-57867821 | None:intergenic |
| AGTGCATACCTCATCCTTTA+AGG | 0.223441 | 3.1:-57865914 | None:intergenic |
| CTCCTTTAGGATAAATTCTT+AGG | 0.242663 | 3.1:-57869076 | None:intergenic |
| CAGATGGCAAATAAAATATT+TGG | 0.245584 | 3.1:+57868437 | MS.gene057344:intron |
| GTGAATCCGATTCCCATATT+TGG | 0.253107 | 3.1:-57870296 | None:intergenic |
| TGATTTCAATGGTCCCTTAA+AGG | 0.259016 | 3.1:+57865900 | MS.gene057344:CDS |
| GATTGAACACGTTCTCCTTT+AGG | 0.264859 | 3.1:-57869089 | None:intergenic |
| AGACGTCGTTCATCCAAATA+TGG | 0.269481 | 3.1:+57870283 | MS.gene057344:intron |
| AAATTGCACCTTATTGGATT+TGG | 0.270742 | 3.1:+57865774 | MS.gene057344:CDS |
| ACTTCTTGAATTAGAAATTC+AGG | 0.277184 | 3.1:-57869656 | None:intergenic |
| CTCATGGAGCCGACCTAATT+AGG | 0.293120 | 3.1:+57868956 | MS.gene057344:CDS |
| ATCCGGAGCAACGCGAGTTC+TGG | 0.295971 | 3.1:-57870087 | None:intergenic |
| TGTATTCACGCGCACCTTGC+TGG | 0.315471 | 3.1:-57868810 | None:intergenic |
| GTTCTATGGCAGAAAGTAAA+TGG | 0.329143 | 3.1:+57868745 | MS.gene057344:intron |
| AGTTTGATAGGTACCTAATT+AGG | 0.337092 | 3.1:-57868969 | None:intergenic |
| AAACATTTGGTTAGTGCAAC+TGG | 0.337432 | 3.1:-57868033 | None:intergenic |
| AGAACCACCTTTAGATCTTA+AGG | 0.339714 | 3.1:+57865666 | MS.gene057344:CDS |
| GGACACAATTCCTACCTTAC+TGG | 0.347434 | 3.1:+57867767 | MS.gene057344:CDS |
| TCGAACTCTTCGTCCCAAAT+AGG | 0.347640 | 3.1:-57870048 | None:intergenic |
| TTGACGGCGGTAAAGTTAAA+AGG | 0.351013 | 3.1:+57868893 | MS.gene057344:CDS |
| GGACAATTGGTATCCTATTT+GGG | 0.357053 | 3.1:+57870035 | MS.gene057344:CDS |
| GCGTGACAGGTTTGTATTGC+TGG | 0.359926 | 3.1:+57869970 | MS.gene057344:intron |
| TCACATTATTTCATGTATAC+AGG | 0.373381 | 3.1:+57867746 | MS.gene057344:CDS |
| CAGAGCTAAGACATGGATTT+CGG | 0.377392 | 3.1:+57870172 | MS.gene057344:CDS |
| AATGAAACTAGCAGTATTGC+AGG | 0.384072 | 3.1:+57865838 | MS.gene057344:CDS |
| GCAAAGTTATCCTGAAGTTT+TGG | 0.384127 | 3.1:-57868129 | None:intergenic |
| AGTTGCACTAACCAAATGTT+TGG | 0.392870 | 3.1:+57868035 | MS.gene057344:CDS |
| CCACCTAACACCAAAACTTC+AGG | 0.394243 | 3.1:+57868119 | MS.gene057344:CDS |
| CCATGTCTTAGCTCTGATAT+AGG | 0.405158 | 3.1:-57870165 | None:intergenic |
| ATTGCAGGTACATCATGATA+TGG | 0.407698 | 3.1:+57867712 | MS.gene057344:intron |
| GATTGGCTCCAAATCCAATA+AGG | 0.408541 | 3.1:-57865782 | None:intergenic |
| CAGTATTGCAGGACTCAGTT+TGG | 0.408717 | 3.1:+57865849 | MS.gene057344:CDS |
| TCAGTTTGAGGATACTCTTT+TGG | 0.409231 | 3.1:-57868551 | None:intergenic |
| GCGAATAATCATGTGTCAAA+TGG | 0.414902 | 3.1:+57868578 | MS.gene057344:CDS |
| ACAGGAACAACAAGATTCTA+TGG | 0.416912 | 3.1:+57868631 | MS.gene057344:CDS |
| TAAATGTGGCCTAAAATTTG+TGG | 0.417479 | 3.1:-57869111 | None:intergenic |
| TTCCAGAACTCGCGTTGCTC+CGG | 0.431005 | 3.1:+57870085 | MS.gene057344:CDS |
| GGTGGTATTAAAGTAGTTCA+TGG | 0.435995 | 3.1:+57867893 | MS.gene057344:CDS |
| CGAGTTCTGGAACAGTCAAT+TGG | 0.437931 | 3.1:-57870074 | None:intergenic |
| CTAACCTTTGTGTAGAAGTC+TGG | 0.438109 | 3.1:-57869885 | None:intergenic |
| CTGCTTCTAGATGATTTCAA+TGG | 0.441202 | 3.1:+57865889 | MS.gene057344:CDS |
| CGAAGTGAAAGATAAAGATA+AGG | 0.444805 | 3.1:+57870110 | MS.gene057344:CDS |
| GGATCAACTACTTAGATTCA+TGG | 0.446194 | 3.1:+57865732 | MS.gene057344:CDS |
| TAGTAAATTGATTTCCAGTA+AGG | 0.448160 | 3.1:-57867781 | None:intergenic |
| CAAGTGTAAAGATGGACAAT+TGG | 0.450323 | 3.1:+57870022 | MS.gene057344:CDS |
| TTTGGAGCCAATCATTGAAA+AGG | 0.458273 | 3.1:+57865792 | MS.gene057344:CDS |
| TGAACATCCCTTGCATCAAT+CGG | 0.458373 | 3.1:-57869601 | None:intergenic |
| CTTTATCTTTCACTTCGATC+CGG | 0.459942 | 3.1:-57870104 | None:intergenic |
| TCTTCTAAAGTTAGAATCAC+TGG | 0.460622 | 3.1:-57868096 | None:intergenic |
| CCACATTTAGGGTGGATGTA+TGG | 0.468165 | 3.1:+57869125 | MS.gene057344:CDS |
| GTGCATACCTCATCCTTTAA+GGG | 0.469745 | 3.1:-57865913 | None:intergenic |
| CCACCATCTTTAGTTGAAGA+TGG | 0.471280 | 3.1:-57867875 | None:intergenic |
| TGGCCATCTTCAACTAAAGA+TGG | 0.471964 | 3.1:+57867872 | MS.gene057344:CDS |
| ATCCTAAGAATTTATCCTAA+AGG | 0.472397 | 3.1:+57869074 | MS.gene057344:CDS |
| GATGAAAACAAGTGTAAAGA+TGG | 0.472423 | 3.1:+57870014 | MS.gene057344:CDS |
| GAAGTGAAAGATAAAGATAA+GGG | 0.476695 | 3.1:+57870111 | MS.gene057344:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 3.1:+57869154 | MS.gene057344:CDS |
| AAAGCTTCCTTAAGATCTAA+AGG | 0.481386 | 3.1:-57865673 | None:intergenic |
| GAAAGTAAATGGTGAAGAGA+TGG | 0.484846 | 3.1:+57868756 | MS.gene057344:intron |
| TTATTCGCACGATCAGTTTG+AGG | 0.487855 | 3.1:-57868563 | None:intergenic |
| AGGCTTTCGATCCTAAAAGA+AGG | 0.498339 | 3.1:+57869690 | MS.gene057344:CDS |
| TCAAGAAGTTGCAAATAATG+AGG | 0.498455 | 3.1:+57869670 | MS.gene057344:CDS |
| CAATGGTCCCTTAAAGGATG+AGG | 0.514587 | 3.1:+57865906 | MS.gene057344:CDS |
| AAATCTGCTTCTGAATCTCA+TGG | 0.515731 | 3.1:+57868940 | MS.gene057344:CDS |
| GTTCATCCAAATATGGGAAT+CGG | 0.518589 | 3.1:+57870290 | MS.gene057344:CDS |
| GACGTCGTTCATCCAAATAT+GGG | 0.525484 | 3.1:+57870284 | MS.gene057344:intron |
| AAGTATACAAAGGAGTTGGC+TGG | 0.527209 | 3.1:+57869820 | MS.gene057344:CDS |
| CAGGTTTGTATTGCTGGAGT+GGG | 0.531989 | 3.1:+57869976 | MS.gene057344:intron |
| CAGTGATAAACCAATTATAG+AGG | 0.533232 | 3.1:+57867811 | MS.gene057344:CDS |
| AAGGATAGACTAAAAGTTGA+CGG | 0.536336 | 3.1:+57868877 | MS.gene057344:CDS |
| TGGTGAAAATTACATGTCAA+AGG | 0.547867 | 3.1:+57865711 | MS.gene057344:CDS |
| CAAGGGATGTTCAAAGCGAA+TGG | 0.550048 | 3.1:+57869611 | MS.gene057344:CDS |
| ATTATAGAGGCTTTGAAACA+AGG | 0.556418 | 3.1:+57867824 | MS.gene057344:CDS |
| CCTATATCAGAGCTAAGACA+TGG | 0.556857 | 3.1:+57870165 | MS.gene057344:CDS |
| TGAAGATGAAACATGGGGAC+AGG | 0.561303 | 3.1:+57868613 | MS.gene057344:CDS |
| AGACATTTGATTACAATCCA+TGG | 0.562214 | 3.1:+57868832 | MS.gene057344:CDS |
| AAAATCAGAAGGTACTATGA+AGG | 0.562601 | 3.1:+57868858 | MS.gene057344:CDS |
| GTCAAAGTATACAAAGGAGT+TGG | 0.566387 | 3.1:+57869816 | MS.gene057344:CDS |
| AAATCACTCCGATTGATGCA+AGG | 0.570110 | 3.1:+57869593 | MS.gene057344:CDS |
| AAATTGATTTCCAGTAAGGT+AGG | 0.573386 | 3.1:-57867777 | None:intergenic |
| GGATGTTCAAAGCGAATGGA+GGG | 0.590594 | 3.1:+57869615 | MS.gene057344:CDS |
| ACCTTTGTGTAGAAGTCTGG+TGG | 0.590735 | 3.1:-57869882 | None:intergenic |
| TTCAAAGCGAATGGAGGGTG+CGG | 0.590959 | 3.1:+57869620 | MS.gene057344:CDS |
| TACATGAAATAATGTGACAA+GGG | 0.596814 | 3.1:-57867740 | None:intergenic |
| ACAGGTTTGTATTGCTGGAG+TGG | 0.597595 | 3.1:+57869975 | MS.gene057344:intron |
| AATCACTCCGATTGATGCAA+GGG | 0.599396 | 3.1:+57869594 | MS.gene057344:CDS |
| AATCGTCTGAAGATGAAACA+TGG | 0.601806 | 3.1:+57868606 | MS.gene057344:CDS |
| GGGATGTTCAAAGCGAATGG+AGG | 0.604762 | 3.1:+57869614 | MS.gene057344:CDS |
| GTGGATGTATGGAGCTCAGA+TGG | 0.609593 | 3.1:+57869136 | MS.gene057344:CDS |
| CCATACATCCACCCTAAATG+TGG | 0.621111 | 3.1:-57869125 | None:intergenic |
| ATCCATGGTGGAAAATCAGA+AGG | 0.621784 | 3.1:+57868847 | MS.gene057344:CDS |
| ATCGTCTGAAGATGAAACAT+GGG | 0.625646 | 3.1:+57868607 | MS.gene057344:CDS |
| TGATAGGTACCTAATTAGGT+CGG | 0.627187 | 3.1:-57868965 | None:intergenic |
| AAACAGGTCAAAGTATACAA+AGG | 0.637507 | 3.1:+57869810 | MS.gene057344:intron |
| CCATCTTCAACTAAAGATGG+TGG | 0.646507 | 3.1:+57867875 | MS.gene057344:CDS |
| TCTGTTATACAATCTGTCGT+AGG | 0.648459 | 3.1:-57868476 | None:intergenic |
| GCTTCCTTAAGATCTAAAGG+TGG | 0.660925 | 3.1:-57865670 | None:intergenic |
| CATTTGATTACAATCCATGG+TGG | 0.664989 | 3.1:+57868835 | MS.gene057344:CDS |
| TTTGGTTAGTGCAACTGGAG+TGG | 0.667170 | 3.1:-57868028 | None:intergenic |
| TATACAAAGGAGTTGGCTGG+AGG | 0.672328 | 3.1:+57869823 | MS.gene057344:CDS |
| ATACATGAAATAATGTGACA+AGG | 0.675745 | 3.1:-57867741 | None:intergenic |
| TATTACAAATCAAACCAGCA+AGG | 0.677933 | 3.1:+57868796 | MS.gene057344:CDS |
| TCCACCAGACTTCTACACAA+AGG | 0.690190 | 3.1:+57869881 | MS.gene057344:CDS |
| TCAACTACTTAGATTCATGG+TGG | 0.694803 | 3.1:+57865735 | MS.gene057344:CDS |
| TCGTCTGAAGATGAAACATG+GGG | 0.715707 | 3.1:+57868608 | MS.gene057344:CDS |
| GATAGACTAAAAGTTGACGG+CGG | 0.769968 | 3.1:+57868880 | MS.gene057344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTTACAAAATGTG+TGG | - | chr3.1:57869933-57869952 | None:intergenic | 15.0% |
| !! | GTATTATTTAATCTAATCAA+AGG | - | chr3.1:57867548-57867567 | None:intergenic | 15.0% |
| !! | GTTATGAAAAAAAATTATCT+TGG | - | chr3.1:57867169-57867188 | None:intergenic | 15.0% |
| !!! | AAAATGAGATGATTTTTATT+CGG | + | chr3.1:57867495-57867514 | MS.gene057344:intron | 15.0% |
| !!! | AACATGACTTATATTTTTAT+GGG | + | chr3.1:57866276-57866295 | MS.gene057344:intron | 15.0% |
| !!! | AATATCACTATTGTTTTAAA+AGG | - | chr3.1:57869445-57869464 | None:intergenic | 15.0% |
| !!! | ACAATATATTTAAAGTTTCA+AGG | - | chr3.1:57870263-57870282 | None:intergenic | 15.0% |
| !!! | ATATATATTTTATGCTAATG+TGG | + | chr3.1:57865948-57865967 | MS.gene057344:intron | 15.0% |
| !!! | ATTTTTTCATATTATTAGTC+AGG | - | chr3.1:57867681-57867700 | None:intergenic | 15.0% |
| !!! | TAACATGACTTATATTTTTA+TGG | + | chr3.1:57866275-57866294 | MS.gene057344:intron | 15.0% |
| !!! | TATTTTTCATGTTAAAAAAC+AGG | + | chr3.1:57869794-57869813 | MS.gene057344:intron | 15.0% |
| !!! | TCATATTATTATTTTTTTGG+TGG | - | chr3.1:57869323-57869342 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAGATAGATGAAA+TGG | - | chr3.1:57867314-57867333 | None:intergenic | 15.0% |
| !! | AAATTTCAAAATTGTTAGGT+CGG | + | chr3.1:57867223-57867242 | MS.gene057344:intron | 20.0% |
| !! | AACTTTAATCACTTTACAAA+AGG | + | chr3.1:57869745-57869764 | MS.gene057344:intron | 20.0% |
| !! | ACTTTAATCACTTTACAAAA+GGG | + | chr3.1:57869746-57869765 | MS.gene057344:intron | 20.0% |
| !! | AGATGGTTAATAATATGAAA+TGG | + | chr3.1:57869294-57869313 | MS.gene057344:intron | 20.0% |
| !! | ATTCAATCACTTCTATTTAT+AGG | - | chr3.1:57868246-57868265 | None:intergenic | 20.0% |
| !! | CAACAAAAAGTTACTATATT+GGG | + | chr3.1:57866609-57866628 | MS.gene057344:intron | 20.0% |
| !! | CAATAGTAGAAATAGATTAT+TGG | - | chr3.1:57866419-57866438 | None:intergenic | 20.0% |
| !! | CAGATTTGACAAATAAAAAT+GGG | - | chr3.1:57866673-57866692 | None:intergenic | 20.0% |
| !! | GCAAAAATTTCAAAATTGTT+AGG | + | chr3.1:57867219-57867238 | MS.gene057344:intron | 20.0% |
| !! | GTTCCAAATAATAAAATGTT+TGG | - | chr3.1:57866745-57866764 | None:intergenic | 20.0% |
| !! | TCAGATTTGACAAATAAAAA+TGG | - | chr3.1:57866674-57866693 | None:intergenic | 20.0% |
| !! | TTAGAGAATATTTCTTCTTT+GGG | - | chr3.1:57866341-57866360 | None:intergenic | 20.0% |
| !! | TTCATAACAAAAAAACTAAG+AGG | + | chr3.1:57867181-57867200 | MS.gene057344:intron | 20.0% |
| !! | TTTAGAGAATATTTCTTCTT+TGG | - | chr3.1:57866342-57866361 | None:intergenic | 20.0% |
| !!! | AAACACTTTTTTTTATGACA+GGG | + | chr3.1:57869563-57869582 | MS.gene057344:intron | 20.0% |
| !!! | AAATGTTAATTTGTTCCTTA+AGG | - | chr3.1:57866457-57866476 | None:intergenic | 20.0% |
| !!! | AACATTTCCCTATTTTTATT+GGG | + | chr3.1:57866470-57866489 | MS.gene057344:intron | 20.0% |
| !!! | AATTGTGTTTTTGGTATATT+TGG | + | chr3.1:57869181-57869200 | MS.gene057344:intron | 20.0% |
| !!! | ACAGTTAGTATATATTTTCA+AGG | + | chr3.1:57866100-57866119 | MS.gene057344:intron | 20.0% |
| !!! | AGAAAAAATGATGATGAATA+TGG | - | chr3.1:57868410-57868429 | None:intergenic | 20.0% |
| !!! | AGGTTTTAAAAAAATGTATG+CGG | - | chr3.1:57869524-57869543 | None:intergenic | 20.0% |
| !!! | ATACACTTAGAATTTTCATT+GGG | - | chr3.1:57867442-57867461 | None:intergenic | 20.0% |
| !!! | ATATATTTAAAGTTTCAAGG+TGG | - | chr3.1:57870260-57870279 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATAAAACTCT+TGG | - | chr3.1:57867339-57867358 | None:intergenic | 20.0% |
| !!! | TAAACACTTTTTTTTATGAC+AGG | + | chr3.1:57869562-57869581 | MS.gene057344:intron | 20.0% |
| !!! | TAACATTTCCCTATTTTTAT+TGG | + | chr3.1:57866469-57866488 | MS.gene057344:intron | 20.0% |
| !!! | TAGCCAAACATTTTATTATT+TGG | + | chr3.1:57866739-57866758 | MS.gene057344:intron | 20.0% |
| ! | AAATTTATGTATCTCATTGC+AGG | + | chr3.1:57867697-57867716 | MS.gene057344:intron | 25.0% |
| ! | AACATGACCCAATAAAAATA+GGG | - | chr3.1:57866480-57866499 | None:intergenic | 25.0% |
| ! | AATTACGTTCATGAATTAGA+TGG | + | chr3.1:57869277-57869296 | MS.gene057344:intron | 25.0% |
| ! | AATTGAATACGCAAGTATTA+AGG | + | chr3.1:57866217-57866236 | MS.gene057344:intron | 25.0% |
| ! | ACTTCTTGAATTAGAAATTC+AGG | - | chr3.1:57869659-57869678 | None:intergenic | 25.0% |
| ! | ATACATGAAATAATGTGACA+AGG | - | chr3.1:57867744-57867763 | None:intergenic | 25.0% |
| ! | ATAGAATGCACAAAATTTCA+GGG | - | chr3.1:57866552-57866571 | None:intergenic | 25.0% |
| ! | ATCCTAAGAATTTATCCTAA+AGG | + | chr3.1:57869074-57869093 | MS.gene057344:CDS | 25.0% |
| ! | ATTGAATACGCAAGTATTAA+GGG | + | chr3.1:57866218-57866237 | MS.gene057344:intron | 25.0% |
| ! | CAAAAAAGGTAAAGTGAATA+AGG | + | chr3.1:57865642-57865661 | MS.gene057344:CDS | 25.0% |
| ! | CAGATGGCAAATAAAATATT+TGG | + | chr3.1:57868437-57868456 | MS.gene057344:intron | 25.0% |
| ! | CCAACAAAAAGTTACTATAT+TGG | + | chr3.1:57866608-57866627 | MS.gene057344:intron | 25.0% |
| ! | CTTGAAAATCATGGTTAATT+AGG | - | chr3.1:57869379-57869398 | None:intergenic | 25.0% |
| ! | GAAGTGAAAGATAAAGATAA+GGG | + | chr3.1:57870111-57870130 | MS.gene057344:CDS | 25.0% |
| ! | GAGTAATTGAACTTGATTTA+TGG | + | chr3.1:57867852-57867871 | MS.gene057344:CDS | 25.0% |
| ! | GTATAGAAATCAAGTTTGAT+AGG | - | chr3.1:57868984-57869003 | None:intergenic | 25.0% |
| ! | TAACATGACCCAATAAAAAT+AGG | - | chr3.1:57866481-57866500 | None:intergenic | 25.0% |
| ! | TAATACTACTAACAAAGAAG+TGG | - | chr3.1:57866797-57866816 | None:intergenic | 25.0% |
| ! | TACATGAAATAATGTGACAA+GGG | - | chr3.1:57867743-57867762 | None:intergenic | 25.0% |
| ! | TAGAGAATATTTCTTCTTTG+GGG | - | chr3.1:57866340-57866359 | None:intergenic | 25.0% |
| ! | TATAGAATGCACAAAATTTC+AGG | - | chr3.1:57866553-57866572 | None:intergenic | 25.0% |
| ! | TATTTCCTAATATGACAACA+AGG | - | chr3.1:57869544-57869563 | None:intergenic | 25.0% |
| ! | TCACATTATTTCATGTATAC+AGG | + | chr3.1:57867746-57867765 | MS.gene057344:CDS | 25.0% |
| ! | TTAAAAAAATGTATGCGGAA+TGG | - | chr3.1:57869519-57869538 | None:intergenic | 25.0% |
| !! | CATACACTTAGAATTTTCAT+TGG | - | chr3.1:57867443-57867462 | None:intergenic | 25.0% |
| !! | CCAATATAGTAACTTTTTGT+TGG | - | chr3.1:57866611-57866630 | None:intergenic | 25.0% |
| !! | GACAAATGCATATTCTTTTA+TGG | - | chr3.1:57868064-57868083 | None:intergenic | 25.0% |
| !! | GATTGTTTTCTTGAATCTTA+TGG | + | chr3.1:57867973-57867992 | MS.gene057344:intron | 25.0% |
| !! | TAAAACCTTGTTGTCATATT+AGG | + | chr3.1:57869536-57869555 | MS.gene057344:intron | 25.0% |
| !! | TACACTTAGAATTTTCATTG+GGG | - | chr3.1:57867441-57867460 | None:intergenic | 25.0% |
| !! | TAGTAAATTGATTTCCAGTA+AGG | - | chr3.1:57867784-57867803 | None:intergenic | 25.0% |
| !! | TTAAGCTTTTTGACCAAAAA+AGG | + | chr3.1:57865628-57865647 | MS.gene057344:CDS | 25.0% |
| !! | TTCAAAACCTTTTCAATGAT+TGG | - | chr3.1:57865802-57865821 | None:intergenic | 25.0% |
| !!! | AACACTTTTTTTTATGACAG+GGG | + | chr3.1:57869564-57869583 | MS.gene057344:intron | 25.0% |
| !!! | AATTTTAACTTATGCCCTTA+AGG | - | chr3.1:57866649-57866668 | None:intergenic | 25.0% |
| !!! | ACTCATTAAGTTGTGTTTTA+AGG | - | chr3.1:57866141-57866160 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTATTCATGCAGA+TGG | + | chr3.1:57868421-57868440 | MS.gene057344:intron | 25.0% |
| !!! | CTTATTCACTTTACCTTTTT+TGG | - | chr3.1:57865644-57865663 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAGGTTCTCTAAT+AGG | - | chr3.1:57869433-57869452 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAAAGTGAAATGA+TGG | - | chr3.1:57868703-57868722 | None:intergenic | 25.0% |
| AAAAAACCATTTGAGCAATG+TGG | + | chr3.1:57866067-57866086 | MS.gene057344:intron | 30.0% | |
| AAAACAATCATCCAACTCTA+TGG | - | chr3.1:57867962-57867981 | None:intergenic | 30.0% | |
| AAACAGGTCAAAGTATACAA+AGG | + | chr3.1:57869810-57869829 | MS.gene057344:intron | 30.0% | |
| AAAGCTTCCTTAAGATCTAA+AGG | - | chr3.1:57865676-57865695 | None:intergenic | 30.0% | |
| AAATTGCACCTTATTGGATT+TGG | + | chr3.1:57865774-57865793 | MS.gene057344:CDS | 30.0% | |
| AAGGATAGACTAAAAGTTGA+CGG | + | chr3.1:57868877-57868896 | MS.gene057344:CDS | 30.0% | |
| AATATAATGCACCATAGAGT+TGG | + | chr3.1:57867948-57867967 | MS.gene057344:intron | 30.0% | |
| AATCTGAATCATCTGTTCTA+TGG | + | chr3.1:57868731-57868750 | MS.gene057344:intron | 30.0% | |
| ACTAGAAACTCAACATTCAT+TGG | + | chr3.1:57866709-57866728 | MS.gene057344:intron | 30.0% | |
| AGAACAAAATTGCACCTTAT+TGG | + | chr3.1:57865768-57865787 | MS.gene057344:CDS | 30.0% | |
| AGACATTTGATTACAATCCA+TGG | + | chr3.1:57868832-57868851 | MS.gene057344:CDS | 30.0% | |
| AGTTTGATAGGTACCTAATT+AGG | - | chr3.1:57868972-57868991 | None:intergenic | 30.0% | |
| ATATACTAACTGTAAAGTGC+AGG | - | chr3.1:57866093-57866112 | None:intergenic | 30.0% | |
| CAATGCTTATCTAACTAGAT+AGG | - | chr3.1:57868361-57868380 | None:intergenic | 30.0% | |
| CAGTGATAAACCAATTATAG+AGG | + | chr3.1:57867811-57867830 | MS.gene057344:CDS | 30.0% | |
| CATAACGCAATTCAAATACA+TGG | + | chr3.1:57869252-57869271 | MS.gene057344:intron | 30.0% | |
| CGAAGTGAAAGATAAAGATA+AGG | + | chr3.1:57870110-57870129 | MS.gene057344:CDS | 30.0% | |
| GATGAAAACAAGTGTAAAGA+TGG | + | chr3.1:57870014-57870033 | MS.gene057344:CDS | 30.0% | |
| GGAATAGCAAAATAGTCATA+AGG | - | chr3.1:57868389-57868408 | None:intergenic | 30.0% | |
| GTCAATAACTCAACATTCAT+TGG | + | chr3.1:57866871-57866890 | MS.gene057344:intron | 30.0% | |
| TAAACAGAAAAATGAGGACA+TGG | + | chr3.1:57868655-57868674 | MS.gene057344:CDS | 30.0% | |
| TAAATGTGGCCTAAAATTTG+TGG | - | chr3.1:57869114-57869133 | None:intergenic | 30.0% | |
| TATGGCTAAACAGAAAAATG+AGG | + | chr3.1:57868649-57868668 | MS.gene057344:CDS | 30.0% | |
| TATTACAAATCAAACCAGCA+AGG | + | chr3.1:57868796-57868815 | MS.gene057344:CDS | 30.0% | |
| TCAAGAAGTTGCAAATAATG+AGG | + | chr3.1:57869670-57869689 | MS.gene057344:CDS | 30.0% | |
| TCATGGTTAATTAGGTTTGA+TGG | - | chr3.1:57869371-57869390 | None:intergenic | 30.0% | |
| TGGTGAAAATTACATGTCAA+AGG | + | chr3.1:57865711-57865730 | MS.gene057344:CDS | 30.0% | |
| TGTTTCAAAGCCTCTATAAT+TGG | - | chr3.1:57867824-57867843 | None:intergenic | 30.0% | |
| TTACTTCTTGAAATCAATGC+AGG | + | chr3.1:57867998-57868017 | MS.gene057344:intron | 30.0% | |
| TTATCTAACTAGATAGGAGA+TGG | - | chr3.1:57868355-57868374 | None:intergenic | 30.0% | |
| TTCCTTATCTTATGCCTTAA+GGG | + | chr3.1:57866632-57866651 | MS.gene057344:intron | 30.0% | |
| ! | AAATTGATTTCCAGTAAGGT+AGG | - | chr3.1:57867780-57867799 | None:intergenic | 30.0% |
| ! | ACAAATTTTAGGCCACATTT+AGG | + | chr3.1:57869113-57869132 | MS.gene057344:CDS | 30.0% |
| ! | ACACTTAGAATTTTCATTGG+GGG | - | chr3.1:57867440-57867459 | None:intergenic | 30.0% |
| ! | ACTTTTAATATCTGCTTCAC+TGG | - | chr3.1:57869719-57869738 | None:intergenic | 30.0% |
| ! | ATTTTCACCATTTGCAAACT+TGG | - | chr3.1:57865701-57865720 | None:intergenic | 30.0% |
| ! | CAAATTTTAGGCCACATTTA+GGG | + | chr3.1:57869114-57869133 | MS.gene057344:CDS | 30.0% |
| ! | CATGCATTGTTATGTTTTTC+AGG | + | chr3.1:57869036-57869055 | MS.gene057344:intron | 30.0% |
| ! | GGTGCATTATATTTTTCTAG+TGG | - | chr3.1:57867941-57867960 | None:intergenic | 30.0% |
| ! | GTGTTCAATCCACAAATTTT+AGG | + | chr3.1:57869102-57869121 | MS.gene057344:CDS | 30.0% |
| ! | TTTTATGGCTTCCAAACATT+TGG | - | chr3.1:57868049-57868068 | None:intergenic | 30.0% |
| !! | AAAATCAGAAGGTACTATGA+AGG | + | chr3.1:57868858-57868877 | MS.gene057344:CDS | 30.0% |
| !! | ATTATAGAGGCTTTGAAACA+AGG | + | chr3.1:57867824-57867843 | MS.gene057344:CDS | 30.0% |
| !! | ATTCATTAACTTGTGCCTTA+AGG | + | chr3.1:57866439-57866458 | MS.gene057344:intron | 30.0% |
| !! | CTCCTTTAGGATAAATTCTT+AGG | - | chr3.1:57869079-57869098 | None:intergenic | 30.0% |
| !! | TAACCATGATTTTCAAGCAT+TGG | + | chr3.1:57869382-57869401 | MS.gene057344:intron | 30.0% |
| !! | TCTTCTAAAGTTAGAATCAC+TGG | - | chr3.1:57868099-57868118 | None:intergenic | 30.0% |
| !!! | CATTGAAAAGGTTTTGAAAG+TGG | + | chr3.1:57865804-57865823 | MS.gene057344:CDS | 30.0% |
| AAACATTTGGTTAGTGCAAC+TGG | - | chr3.1:57868036-57868055 | None:intergenic | 35.0% | |
| AAATCTGCTTCTGAATCTCA+TGG | + | chr3.1:57868940-57868959 | MS.gene057344:CDS | 35.0% | |
| AATCGTCTGAAGATGAAACA+TGG | + | chr3.1:57868606-57868625 | MS.gene057344:CDS | 35.0% | |
| AATGAAACTAGCAGTATTGC+AGG | + | chr3.1:57865838-57865857 | MS.gene057344:CDS | 35.0% | |
| ACAGGAACAACAAGATTCTA+TGG | + | chr3.1:57868631-57868650 | MS.gene057344:CDS | 35.0% | |
| ACCAGCATCGCTAAAAAATA+TGG | + | chr3.1:57868508-57868527 | MS.gene057344:CDS | 35.0% | |
| AGAAAAATGAGGACATGGTA+AGG | + | chr3.1:57868660-57868679 | MS.gene057344:intron | 35.0% | |
| AGAACCACCTTTAGATCTTA+AGG | + | chr3.1:57865666-57865685 | MS.gene057344:CDS | 35.0% | |
| AGTTGCACTAACCAAATGTT+TGG | + | chr3.1:57868035-57868054 | MS.gene057344:CDS | 35.0% | |
| ATCGTCTGAAGATGAAACAT+GGG | + | chr3.1:57868607-57868626 | MS.gene057344:CDS | 35.0% | |
| ATGCCAATGCTTGAAAATCA+TGG | - | chr3.1:57869388-57869407 | None:intergenic | 35.0% | |
| ATTGCAGGTACATCATGATA+TGG | + | chr3.1:57867712-57867731 | MS.gene057344:intron | 35.0% | |
| CAAAAAAACTAAGAGGTTCC+TGG | + | chr3.1:57867188-57867207 | MS.gene057344:intron | 35.0% | |
| CAAGTGTAAAGATGGACAAT+TGG | + | chr3.1:57870022-57870041 | MS.gene057344:CDS | 35.0% | |
| CATAAGAAACCATAATGTCG+TGG | + | chr3.1:57869493-57869512 | MS.gene057344:intron | 35.0% | |
| CATTTGATTACAATCCATGG+TGG | + | chr3.1:57868835-57868854 | MS.gene057344:CDS | 35.0% | |
| CTGCTTCTAGATGATTTCAA+TGG | + | chr3.1:57865889-57865908 | MS.gene057344:CDS | 35.0% | |
| CTTTATCTTTCACTTCGATC+CGG | - | chr3.1:57870107-57870126 | None:intergenic | 35.0% | |
| GAAAGTAAATGGTGAAGAGA+TGG | + | chr3.1:57868756-57868775 | MS.gene057344:intron | 35.0% | |
| GCGAATAATCATGTGTCAAA+TGG | + | chr3.1:57868578-57868597 | MS.gene057344:CDS | 35.0% | |
| GCTGAATTAAACCTACCATA+AGG | + | chr3.1:57869008-57869027 | MS.gene057344:intron | 35.0% | |
| GGACAATTGGTATCCTATTT+GGG | + | chr3.1:57870035-57870054 | MS.gene057344:CDS | 35.0% | |
| GGATCAACTACTTAGATTCA+TGG | + | chr3.1:57865732-57865751 | MS.gene057344:CDS | 35.0% | |
| GGTGGTATTAAAGTAGTTCA+TGG | + | chr3.1:57867893-57867912 | MS.gene057344:CDS | 35.0% | |
| GTAAACTAACACACACAAAG+TGG | - | chr3.1:57867281-57867300 | None:intergenic | 35.0% | |
| GTCAAAGTATACAAAGGAGT+TGG | + | chr3.1:57869816-57869835 | MS.gene057344:CDS | 35.0% | |
| GTTCATCCAAATATGGGAAT+CGG | + | chr3.1:57870290-57870309 | MS.gene057344:CDS | 35.0% | |
| GTTCCTTATCTTATGCCTTA+AGG | + | chr3.1:57866631-57866650 | MS.gene057344:intron | 35.0% | |
| GTTCTATGGCAGAAAGTAAA+TGG | + | chr3.1:57868745-57868764 | MS.gene057344:intron | 35.0% | |
| TAAAAGGTTCTCTAATAGGC+TGG | - | chr3.1:57869429-57869448 | None:intergenic | 35.0% | |
| TCAACTACTTAGATTCATGG+TGG | + | chr3.1:57865735-57865754 | MS.gene057344:CDS | 35.0% | |
| TCTGTTATACAATCTGTCGT+AGG | - | chr3.1:57868479-57868498 | None:intergenic | 35.0% | |
| TGATAGGTACCTAATTAGGT+CGG | - | chr3.1:57868968-57868987 | None:intergenic | 35.0% | |
| TGATTTCAATGGTCCCTTAA+AGG | + | chr3.1:57865900-57865919 | MS.gene057344:CDS | 35.0% | |
| TGGACAATTGGTATCCTATT+TGG | + | chr3.1:57870034-57870053 | MS.gene057344:CDS | 35.0% | |
| TTGAAGACATGCATATTGTC+CGG | - | chr3.1:57868304-57868323 | None:intergenic | 35.0% | |
| ! | AACTCTGTCAAGCTTTTACT+TGG | + | chr3.1:57870231-57870250 | MS.gene057344:intron | 35.0% |
| ! | ACTCAACATTCATTGGTGAT+TGG | + | chr3.1:57866716-57866735 | MS.gene057344:intron | 35.0% |
| ! | GCAAAGTTATCCTGAAGTTT+TGG | - | chr3.1:57868132-57868151 | None:intergenic | 35.0% |
| ! | GCAGGTTAGAATTGTGTTTT+TGG | + | chr3.1:57869172-57869191 | MS.gene057344:intron | 35.0% |
| ! | TAGTGATAACTTGTGCTCTT+AGG | + | chr3.1:57866299-57866318 | MS.gene057344:intron | 35.0% |
| ! | TCAGTTTGAGGATACTCTTT+TGG | - | chr3.1:57868554-57868573 | None:intergenic | 35.0% |
| ! | TTCACTGGAAACCTTCTTTT+AGG | - | chr3.1:57869704-57869723 | None:intergenic | 35.0% |
| ! | TTTGGAGCCAATCATTGAAA+AGG | + | chr3.1:57865792-57865811 | MS.gene057344:CDS | 35.0% |
| !! | AAATTTTTGCCACTTGAACC+AGG | - | chr3.1:57867209-57867228 | None:intergenic | 35.0% |
| !! | ATTCTTTAACTTGTGCCCTA+AGG | - | chr3.1:57866512-57866531 | None:intergenic | 35.0% |
| !! | GCTTTTTCCAAGTTTGCAAA+TGG | + | chr3.1:57865691-57865710 | MS.gene057344:CDS | 35.0% |
| !! | TTCTTTAACTTGTGCCCTAA+GGG | - | chr3.1:57866511-57866530 | None:intergenic | 35.0% |
| !!! | ACCATATTTTTTAGCGATGC+TGG | - | chr3.1:57868512-57868531 | None:intergenic | 35.0% |
| !!! | TATCCTGAAGTTTTGGTGTT+AGG | - | chr3.1:57868125-57868144 | None:intergenic | 35.0% |
| !!! | TTTTTTTTATGACAGGGGCA+TGG | + | chr3.1:57869569-57869588 | MS.gene057344:intron | 35.0% |
| AACTAACACACACAAAGTGG+AGG | - | chr3.1:57867278-57867297 | None:intergenic | 40.0% | |
| AAGTATACAAAGGAGTTGGC+TGG | + | chr3.1:57869820-57869839 | MS.gene057344:CDS | 40.0% | |
| ACAAATCTCACACTTTGGTG+GGG | - | chr3.1:57866846-57866865 | None:intergenic | 40.0% | |
| ACAATGCATGTCAAGCCTTA+TGG | - | chr3.1:57869026-57869045 | None:intergenic | 40.0% | |
| AGACGTCGTTCATCCAAATA+TGG | + | chr3.1:57870283-57870302 | MS.gene057344:intron | 40.0% | |
| AGGCTTTCGATCCTAAAAGA+AGG | + | chr3.1:57869690-57869709 | MS.gene057344:CDS | 40.0% | |
| AGTGCATACCTCATCCTTTA+AGG | - | chr3.1:57865917-57865936 | None:intergenic | 40.0% | |
| ATGAGGACATGGTAAGGAAT+AGG | + | chr3.1:57868666-57868685 | MS.gene057344:intron | 40.0% | |
| ATTCTCCGTATAGAAACCGT+GGG | - | chr3.1:57867074-57867093 | None:intergenic | 40.0% | |
| CAAAGTGTGAGATTTGTGAG+TGG | + | chr3.1:57866849-57866868 | MS.gene057344:intron | 40.0% | |
| CACAAATCTCACACTTTGGT+GGG | - | chr3.1:57866847-57866866 | None:intergenic | 40.0% | |
| CACTCACAAATCTCACACTT+TGG | - | chr3.1:57866851-57866870 | None:intergenic | 40.0% | |
| CAGAGCTAAGACATGGATTT+CGG | + | chr3.1:57870172-57870191 | MS.gene057344:CDS | 40.0% | |
| CCACCATCTTTAGTTGAAGA+TGG | - | chr3.1:57867878-57867897 | None:intergenic | 40.0% | |
| CCATCTTCAACTAAAGATGG+TGG | + | chr3.1:57867875-57867894 | MS.gene057344:CDS | 40.0% | |
| CCTATATCAGAGCTAAGACA+TGG | + | chr3.1:57870165-57870184 | MS.gene057344:CDS | 40.0% | |
| CTAACCTTTGTGTAGAAGTC+TGG | - | chr3.1:57869888-57869907 | None:intergenic | 40.0% | |
| GACGTCGTTCATCCAAATAT+GGG | + | chr3.1:57870284-57870303 | MS.gene057344:intron | 40.0% | |
| GATAGACTAAAAGTTGACGG+CGG | + | chr3.1:57868880-57868899 | MS.gene057344:CDS | 40.0% | |
| GATGGTTGCATTCAATATGC+AGG | + | chr3.1:57869154-57869173 | MS.gene057344:CDS | 40.0% | |
| GATTGAACACGTTCTCCTTT+AGG | - | chr3.1:57869092-57869111 | None:intergenic | 40.0% | |
| GCTTCCTTAAGATCTAAAGG+TGG | - | chr3.1:57865673-57865692 | None:intergenic | 40.0% | |
| GTGAATCCGATTCCCATATT+TGG | - | chr3.1:57870299-57870318 | None:intergenic | 40.0% | |
| GTGCATACCTCATCCTTTAA+GGG | - | chr3.1:57865916-57865935 | None:intergenic | 40.0% | |
| GTGTGGGGTACATAGAAAAT+TGG | - | chr3.1:57867049-57867068 | None:intergenic | 40.0% | |
| TATTCTCCGTATAGAAACCG+TGG | - | chr3.1:57867075-57867094 | None:intergenic | 40.0% | |
| TCACAAATCTCACACTTTGG+TGG | - | chr3.1:57866848-57866867 | None:intergenic | 40.0% | |
| TCGTCTGAAGATGAAACATG+GGG | + | chr3.1:57868608-57868627 | MS.gene057344:CDS | 40.0% | |
| TGCCCTTAAGGCATAAGATA+AGG | - | chr3.1:57866637-57866656 | None:intergenic | 40.0% | |
| TGGCCATCTTCAACTAAAGA+TGG | + | chr3.1:57867872-57867891 | MS.gene057344:CDS | 40.0% | |
| TTATTCGCACGATCAGTTTG+AGG | - | chr3.1:57868566-57868585 | None:intergenic | 40.0% | |
| TTCGGTACGTAAGTTCTCAA+TGG | + | chr3.1:57867513-57867532 | MS.gene057344:intron | 40.0% | |
| TTGACGGCGGTAAAGTTAAA+AGG | + | chr3.1:57868893-57868912 | MS.gene057344:CDS | 40.0% | |
| ! | ATCCATGGTGGAAAATCAGA+AGG | + | chr3.1:57868847-57868866 | MS.gene057344:CDS | 40.0% |
| ! | ATTTTAGGCCACATTTAGGG+TGG | + | chr3.1:57869117-57869136 | MS.gene057344:CDS | 40.0% |
| ! | CTATGTGATAGTGTTGTGTC+CGG | - | chr3.1:57868220-57868239 | None:intergenic | 40.0% |
| ! | GATTGGCTCCAAATCCAATA+AGG | - | chr3.1:57865785-57865804 | None:intergenic | 40.0% |
| ! | GTTGCTTTGTGTGACAGAAA+GGG | + | chr3.1:57870198-57870217 | MS.gene057344:intron | 40.0% |
| ! | GTTTGAGGATACTCTTTTGG+TGG | - | chr3.1:57868551-57868570 | None:intergenic | 40.0% |
| ! | TACCTTCTGATTTTCCACCA+TGG | - | chr3.1:57868852-57868871 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | + | chr3.1:57866494-57866513 | MS.gene057344:intron | 40.0% |
| !! | CCATGTCTTAGCTCTGATAT+AGG | - | chr3.1:57870168-57870187 | None:intergenic | 40.0% |
| !! | TCAAGCATTGGCATATTGCA+TGG | + | chr3.1:57869394-57869413 | MS.gene057344:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | + | chr3.1:57866493-57866512 | MS.gene057344:intron | 40.0% |
| !! | TGTTGCTTTGTGTGACAGAA+AGG | + | chr3.1:57870197-57870216 | MS.gene057344:intron | 40.0% |
| !!! | ATTTTTTAGCGATGCTGGTG+AGG | - | chr3.1:57868507-57868526 | None:intergenic | 40.0% |
| !!! | TTTTTTAGCGATGCTGGTGA+GGG | - | chr3.1:57868506-57868525 | None:intergenic | 40.0% |
| ACAGGTTTGTATTGCTGGAG+TGG | + | chr3.1:57869975-57869994 | MS.gene057344:intron | 45.0% | |
| ACCTTTGTGTAGAAGTCTGG+TGG | - | chr3.1:57869885-57869904 | None:intergenic | 45.0% | |
| ACGGAGAATAGTCTCTATCG+CGG | + | chr3.1:57867085-57867104 | MS.gene057344:intron | 45.0% | |
| CAAGGGATGTTCAAAGCGAA+TGG | + | chr3.1:57869611-57869630 | MS.gene057344:CDS | 45.0% | |
| CAATGGTCCCTTAAAGGATG+AGG | + | chr3.1:57865906-57865925 | MS.gene057344:CDS | 45.0% | |
| CAGGTTTGTATTGCTGGAGT+GGG | + | chr3.1:57869976-57869995 | MS.gene057344:intron | 45.0% | |
| CAGTATTGCAGGACTCAGTT+TGG | + | chr3.1:57865849-57865868 | MS.gene057344:CDS | 45.0% | |
| CCACCTAACACCAAAACTTC+AGG | + | chr3.1:57868119-57868138 | MS.gene057344:CDS | 45.0% | |
| CCATACATCCACCCTAAATG+TGG | - | chr3.1:57869128-57869147 | None:intergenic | 45.0% | |
| CGTCATGTGTCAGTGCTTAT+AGG | - | chr3.1:57868191-57868210 | None:intergenic | 45.0% | |
| GATCAATCTGATTGCGTGAC+AGG | + | chr3.1:57869957-57869976 | MS.gene057344:intron | 45.0% | |
| GGACACAATTCCTACCTTAC+TGG | + | chr3.1:57867767-57867786 | MS.gene057344:CDS | 45.0% | |
| GGATGTTCAAAGCGAATGGA+GGG | + | chr3.1:57869615-57869634 | MS.gene057344:CDS | 45.0% | |
| GGTACGTAAGTTCTCAATGG+AGG | + | chr3.1:57867516-57867535 | MS.gene057344:intron | 45.0% | |
| TAAGAGGTTCCTGGTTCAAG+TGG | + | chr3.1:57867197-57867216 | MS.gene057344:intron | 45.0% | |
| TATACAAAGGAGTTGGCTGG+AGG | + | chr3.1:57869823-57869842 | MS.gene057344:CDS | 45.0% | |
| TCCACCAGACTTCTACACAA+AGG | + | chr3.1:57869881-57869900 | MS.gene057344:CDS | 45.0% | |
| TCGAACTCTTCGTCCCAAAT+AGG | - | chr3.1:57870051-57870070 | None:intergenic | 45.0% | |
| TGAAGATGAAACATGGGGAC+AGG | + | chr3.1:57868613-57868632 | MS.gene057344:CDS | 45.0% | |
| TTCTCCGTATAGAAACCGTG+GGG | - | chr3.1:57867073-57867092 | None:intergenic | 45.0% | |
| TTTGGTTAGTGCAACTGGAG+TGG | - | chr3.1:57868031-57868050 | None:intergenic | 45.0% | |
| ! | AAGGGATCAGACGATTTTGC+TGG | + | chr3.1:57870129-57870148 | MS.gene057344:CDS | 45.0% |
| ! | CCACATTTAGGGTGGATGTA+TGG | + | chr3.1:57869125-57869144 | MS.gene057344:CDS | 45.0% |
| ! | TGCATGTCAAGCCTTATGGT+AGG | - | chr3.1:57869022-57869041 | None:intergenic | 45.0% |
| !! | ACACACAAAGTGGAGGTGTT+GGG | - | chr3.1:57867271-57867290 | None:intergenic | 45.0% |
| !! | AGGTGTTGGGATTTGAATCC+CGG | - | chr3.1:57867258-57867277 | None:intergenic | 45.0% |
| !! | CGAGTTCTGGAACAGTCAAT+TGG | - | chr3.1:57870077-57870096 | None:intergenic | 45.0% |
| !!! | CCTGAAGTTTTGGTGTTAGG+TGG | - | chr3.1:57868122-57868141 | None:intergenic | 45.0% |
| !! | AAAAAAATAATAATATGAAA+TGG | + | chr3.1:57869325-57869344 | MS.gene057344:intron | 5.0% |
| !!! | ATTTCATATTATTATTTTTT+TGG | - | chr3.1:57869326-57869345 | None:intergenic | 5.0% |
| CTCATGGAGCCGACCTAATT+AGG | + | chr3.1:57868956-57868975 | MS.gene057344:CDS | 50.0% | |
| GAGAATAGTCTCTATCGCGG+TGG | + | chr3.1:57867088-57867107 | MS.gene057344:intron | 50.0% | |
| GCGTGACAGGTTTGTATTGC+TGG | + | chr3.1:57869970-57869989 | MS.gene057344:intron | 50.0% | |
| GGGATGTTCAAAGCGAATGG+AGG | + | chr3.1:57869614-57869633 | MS.gene057344:CDS | 50.0% | |
| GTGGATGTATGGAGCTCAGA+TGG | + | chr3.1:57869136-57869155 | MS.gene057344:CDS | 50.0% | |
| GTTAGGTCGGACGTTATGAC+CGG | + | chr3.1:57867236-57867255 | MS.gene057344:intron | 50.0% | |
| TGCAGGCCACATTGCTCAAA+TGG | - | chr3.1:57866076-57866095 | None:intergenic | 50.0% | |
| TTAGGTCGGACGTTATGACC+GGG | + | chr3.1:57867237-57867256 | MS.gene057344:intron | 50.0% | |
| TTCAAAGCGAATGGAGGGTG+CGG | + | chr3.1:57869620-57869639 | MS.gene057344:CDS | 50.0% | |
| TTTCAGACACCATCACGTGC+CGG | + | chr3.1:57868282-57868301 | MS.gene057344:intron | 50.0% | |
| ! | CACACACAAAGTGGAGGTGT+TGG | - | chr3.1:57867272-57867291 | None:intergenic | 50.0% |
| ATAGAAACCGTGGGGCGTGT+GGG | - | chr3.1:57867065-57867084 | None:intergenic | 55.0% | |
| CACGCCCCACGGTTTCTATA+CGG | + | chr3.1:57867066-57867085 | MS.gene057344:intron | 55.0% | |
| CTGACACATGACGCAGACAC+CGG | + | chr3.1:57868198-57868217 | MS.gene057344:intron | 55.0% | |
| GCATATTGTCCGGCACGTGA+TGG | - | chr3.1:57868294-57868313 | None:intergenic | 55.0% | |
| GCGGAATGGCCACGACATTA+TGG | - | chr3.1:57869505-57869524 | None:intergenic | 55.0% | |
| TATAGAAACCGTGGGGCGTG+TGG | - | chr3.1:57867066-57867085 | None:intergenic | 55.0% | |
| TCACACTTTGGTGGGGTACG+TGG | - | chr3.1:57866839-57866858 | None:intergenic | 55.0% | |
| TGTATTCACGCGCACCTTGC+TGG | - | chr3.1:57868813-57868832 | None:intergenic | 55.0% | |
| TTCCAGAACTCGCGTTGCTC+CGG | + | chr3.1:57870085-57870104 | MS.gene057344:CDS | 55.0% | |
| ATCCGGAGCAACGCGAGTTC+TGG | - | chr3.1:57870090-57870109 | None:intergenic | 60.0% | |
| TAGAAACCGTGGGGCGTGTG+GGG | - | chr3.1:57867064-57867083 | None:intergenic | 60.0% | |
| TATGTACCCCACACGCCCCA+CGG | + | chr3.1:57867055-57867074 | MS.gene057344:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 57865604 | 57870333 | 57865604 | ID=MS.gene057344 |
| chr3.1 | mRNA | 57865604 | 57870333 | 57865604 | ID=MS.gene057344.t1;Parent=MS.gene057344 |
| chr3.1 | exon | 57865604 | 57865927 | 57865604 | ID=MS.gene057344.t1.exon1;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57865604 | 57865927 | 57865604 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57867719 | 57867918 | 57867719 | ID=MS.gene057344.t1.exon2;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57867719 | 57867918 | 57867719 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57868020 | 57868155 | 57868020 | ID=MS.gene057344.t1.exon3;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57868020 | 57868155 | 57868020 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57868440 | 57868676 | 57868440 | ID=MS.gene057344.t1.exon4;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57868440 | 57868676 | 57868440 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57868757 | 57868977 | 57868757 | ID=MS.gene057344.t1.exon5;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57868757 | 57868977 | 57868757 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57869058 | 57869175 | 57869058 | ID=MS.gene057344.t1.exon6;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57869058 | 57869175 | 57869058 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57869584 | 57869736 | 57869584 | ID=MS.gene057344.t1.exon7;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57869584 | 57869736 | 57869584 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57869816 | 57869902 | 57869816 | ID=MS.gene057344.t1.exon8;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57869816 | 57869902 | 57869816 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57869979 | 57870193 | 57869979 | ID=MS.gene057344.t1.exon9;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57869979 | 57870193 | 57869979 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| chr3.1 | exon | 57870285 | 57870333 | 57870285 | ID=MS.gene057344.t1.exon10;Parent=MS.gene057344.t1 |
| chr3.1 | CDS | 57870285 | 57870333 | 57870285 | ID=cds.MS.gene057344.t1;Parent=MS.gene057344.t1 |
| Gene Sequence |
| Protein sequence |
