Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055386.t1 | XP_013443819.1 | 98.6 | 624 | 8 | 1 | 1 | 623 | 1 | 624 | 0.00E+00 | 1205.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055386.t1 | F4HVW5 | 46.6 | 609 | 263 | 11 | 19 | 621 | 38 | 590 | 8.7e-132 | 472.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055386.t1 | A0A072TJX9 | 98.6 | 624 | 8 | 1 | 1 | 623 | 1 | 624 | 0.0e+00 | 1205.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene055386 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene055386 | 0.817107 | 3.92E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene055386 | 0.829297 | 5.57E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene055386 | 0.807168 | 5.77E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene055386 | 0.817626 | 2.99E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene055386 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene052463 | MS.gene055386 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene055386 | 0.846389 | 2.24E-59 | -1.69E-46 |
| MS.gene052534 | MS.gene055386 | 0.809175 | 2.15E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene055386 | 0.806843 | 6.75E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene055386 | -0.802764 | 4.81E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene055386 | 0.80459 | 2.01E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene055386 | 0.800891 | 1.16E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene055513 | 0.814463 | 1.52E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene055724 | 0.818116 | 2.32E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene056519 | 0.800143 | 1.65E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene056699 | 0.820051 | 8.41E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene05686 | 0.817576 | 3.07E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene057102 | 0.81195 | 5.42E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene057344 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene059634 | 0.826972 | 2.02E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene05985 | -0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene060522 | 0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene060933 | 0.835738 | 1.41E-56 | -1.69E-46 |
| MS.gene055386 | MS.gene060935 | 0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene060937 | 0.830701 | 2.53E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene061100 | 0.823912 | 1.07E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene061160 | 0.844192 | 8.80E-59 | -1.69E-46 |
| MS.gene055386 | MS.gene06133 | 0.800984 | 1.11E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene061564 | 0.807685 | 4.48E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene061707 | 0.833958 | 3.95E-56 | -1.69E-46 |
| MS.gene055386 | MS.gene061729 | 0.801393 | 9.20E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene061811 | 0.800958 | 1.13E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene06372 | 0.841572 | 4.38E-58 | -1.69E-46 |
| MS.gene055386 | MS.gene064243 | 0.818694 | 1.72E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene065159 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene067087 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene069825 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene070029 | 0.820567 | 6.41E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene070301 | 0.815767 | 7.81E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene070818 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene072116 | 0.8387 | 2.46E-57 | -1.69E-46 |
| MS.gene055386 | MS.gene072873 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene09600 | 0.806449 | 8.18E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene09656 | 0.853337 | 2.55E-61 | -1.69E-46 |
| MS.gene055386 | MS.gene20117 | 0.825496 | 4.54E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene20298 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene21470 | 0.841147 | 5.67E-58 | -1.69E-46 |
| MS.gene055386 | MS.gene21536 | 0.806127 | 9.57E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene22958 | 0.813202 | 2.88E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene24903 | 0.807355 | 5.26E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene25217 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene25471 | 0.800142 | 1.66E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene25860 | 0.80447 | 2.13E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene27059 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene27997 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene28462 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene28611 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene29036 | 0.828301 | 9.70E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene29096 | 0.830189 | 3.38E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene29631 | 0.819698 | 1.01E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene31111 | 0.827964 | 1.17E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene31336 | 0.821174 | 4.65E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene32182 | 0.839682 | 1.37E-57 | -1.69E-46 |
| MS.gene055386 | MS.gene32184 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene32636 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene32688 | 0.816437 | 5.53E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene32965 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene33135 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene33466 | 0.830612 | 2.66E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene34508 | 0.824551 | 7.59E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene34691 | 0.807877 | 4.08E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene35800 | 0.805582 | 1.25E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene35858 | 0.811596 | 6.47E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene35934 | 0.814918 | 1.21E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene37007 | 0.820024 | 8.53E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene37028 | 0.805891 | 1.07E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene37090 | 0.811657 | 6.27E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene38207 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene39046 | 0.866329 | 3.09E-65 | -1.69E-46 |
| MS.gene055386 | MS.gene39074 | 0.817723 | 2.84E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene39253 | 0.819794 | 9.63E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene39404 | 0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene39406 | 0.828784 | 7.41E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene39529 | 0.810235 | 1.27E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene40093 | 0.81484 | 1.26E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene41678 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene42528 | 0.809089 | 2.25E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene42653 | 0.822075 | 2.88E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene43381 | 0.80125 | 9.84E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene43969 | 0.810021 | 1.42E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene44969 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene45281 | 0.813259 | 2.80E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene47581 | 0.810273 | 1.25E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene47601 | 0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene47822 | 0.826359 | 2.83E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene47990 | 0.816536 | 5.26E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene49467 | 0.803511 | 3.37E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene49876 | 0.826107 | 3.25E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene50867 | 0.800903 | 1.16E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene51789 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene54045 | 0.824055 | 9.93E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene56742 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene57128 | 0.811895 | 5.57E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene57360 | 0.805797 | 1.12E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene58134 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene58136 | 0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene055386 | MS.gene58571 | 0.812953 | 3.27E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene58930 | 0.812757 | 3.61E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene59241 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene59242 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene59811 | 0.815354 | 9.65E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene61957 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene62423 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene62924 | 0.832382 | 9.76E-56 | -1.69E-46 |
| MS.gene055386 | MS.gene64800 | 0.813621 | 2.33E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene64934 | 0.809597 | 1.75E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene67067 | 0.818806 | 1.62E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene67735 | 0.807327 | 5.34E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene67841 | 0.800928 | 1.15E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene68291 | 0.801819 | 7.52E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene68444 | 0.800673 | 1.29E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene69239 | 0.802918 | 4.47E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene70282 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene70283 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene71810 | 0.8803 | 6.15E-70 | -1.69E-46 |
| MS.gene055386 | MS.gene73078 | 0.801595 | 8.36E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene74235 | 0.814089 | 1.84E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene74537 | 0.853261 | 2.69E-61 | -1.69E-46 |
| MS.gene055386 | MS.gene74606 | 0.810037 | 1.41E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene74972 | 0.812467 | 4.18E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene75413 | 0.829005 | 6.56E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene75521 | 0.831522 | 1.59E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene76244 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene76314 | 0.828068 | 1.10E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene76506 | 0.80259 | 5.22E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene76516 | 0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene77356 | 0.801622 | 8.26E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene78318 | 0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene78642 | 0.850578 | 1.55E-60 | -1.69E-46 |
| MS.gene055386 | MS.gene80201 | 0.826403 | 2.77E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene80237 | 0.832953 | 7.04E-56 | -1.69E-46 |
| MS.gene055386 | MS.gene80577 | 0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene82912 | 0.806007 | 1.01E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene84179 | 0.815641 | 8.33E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene84345 | 0.803327 | 3.68E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene84454 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene84703 | 0.858923 | 5.90E-63 | -1.69E-46 |
| MS.gene055386 | MS.gene84734 | 0.807786 | 4.26E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene85281 | 0.820502 | 6.63E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene87673 | 0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene055386 | MS.gene88032 | 0.84116 | 5.62E-58 | -1.69E-46 |
| MS.gene055386 | MS.gene88062 | 0.81935 | 1.22E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene88256 | 0.824864 | 6.41E-54 | -1.69E-46 |
| MS.gene055386 | MS.gene89154 | 0.810247 | 1.27E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene89985 | 0.822968 | 1.78E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene90121 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene90260 | 0.823244 | 1.54E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene90263 | 0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene91778 | 0.875675 | 2.56E-68 | -1.69E-46 |
| MS.gene055386 | MS.gene92320 | 0.808982 | 2.37E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene93025 | 0.830599 | 2.68E-55 | -1.69E-46 |
| MS.gene055386 | MS.gene94056 | 0.810991 | 8.75E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene94231 | 0.815415 | 9.35E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene94674 | 0.820833 | 5.57E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene95712 | 0.817818 | 2.71E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene96190 | 0.81894 | 1.51E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene97017 | 0.809024 | 2.32E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene98721 | 0.816982 | 4.18E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene99858 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene055386 | MS.gene99860 | 0.847143 | 1.39E-59 | -1.69E-46 |
| MS.gene055386 | MS.gene99894 | 0.823422 | 1.40E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene99937 | 0.824277 | 8.81E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055386.t1 | MTR_8g006895 | 98.558 | 624 | 8 | 1 | 1 | 623 | 1 | 624 | 0.0 | 1279 |
| MS.gene055386.t1 | MTR_8g006895 | 98.397 | 624 | 8 | 2 | 1 | 623 | 1 | 623 | 0.0 | 1272 |
| MS.gene055386.t1 | MTR_4g087320 | 24.069 | 403 | 220 | 13 | 54 | 436 | 233 | 569 | 9.46e-20 | 93.6 |
| MS.gene055386.t1 | MTR_4g087320 | 24.198 | 343 | 177 | 12 | 54 | 376 | 233 | 512 | 2.57e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055386.t1 | AT1G02120 | 47.480 | 615 | 249 | 12 | 19 | 621 | 38 | 590 | 6.93e-177 | 515 |
| MS.gene055386.t1 | AT1G02120 | 54.632 | 421 | 161 | 5 | 19 | 431 | 38 | 436 | 3.41e-149 | 439 |
| MS.gene055386.t1 | AT1G02120 | 53.885 | 399 | 154 | 5 | 19 | 409 | 38 | 414 | 2.93e-137 | 407 |
| MS.gene055386.t1 | AT3G59660 | 31.387 | 137 | 73 | 3 | 49 | 169 | 227 | 358 | 5.55e-12 | 68.9 |
| MS.gene055386.t1 | AT3G59660 | 31.387 | 137 | 73 | 3 | 49 | 169 | 227 | 358 | 6.53e-12 | 68.9 |
Find 125 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGTACATCTCATCTTTA+AGG | 0.146037 | 8.1:+86812656 | None:intergenic |
| TCCTATAAACTCGATATTTC+TGG | 0.151087 | 8.1:+86818532 | None:intergenic |
| TGGCATCCTCAAGAGAAATT+TGG | 0.189881 | 8.1:-86819203 | MS.gene055386:CDS |
| CGTAAAAGATGCGGCGATAA+AGG | 0.277145 | 8.1:-86819422 | MS.gene055386:intron |
| CCAGGAAAACATACTTATTC+AGG | 0.290582 | 8.1:-86824673 | MS.gene055386:intron |
| GCAACACACGTATAAGCTTC+TGG | 0.294393 | 8.1:+86819647 | None:intergenic |
| TCAGCGCTGGATTGCTTCTC+TGG | 0.303106 | 8.1:+86820593 | None:intergenic |
| AAACGATGCCAGAGCAATTA+TGG | 0.303999 | 8.1:-86823226 | MS.gene055386:CDS |
| TCTGGAACAACTATCAATAT+AGG | 0.304457 | 8.1:+86820611 | None:intergenic |
| CACAATTAAAATCTTCAATT+AGG | 0.313779 | 8.1:+86824700 | None:intergenic |
| CAGACTTCAAGTGTGCTTCA+TGG | 0.317114 | 8.1:-86819223 | MS.gene055386:CDS |
| TAAAGGTTGAAGACTTCTTT+TGG | 0.322771 | 8.1:-86819487 | MS.gene055386:CDS |
| TGTTGCAGAATCAATATTTC+CGG | 0.323318 | 8.1:-86819630 | MS.gene055386:intron |
| TTTCAATTCTTCCGATATTC+CGG | 0.339873 | 8.1:-86827098 | MS.gene055386:intron |
| TTGGGAGTTCCATCCATTAC+TGG | 0.354910 | 8.1:-86820641 | MS.gene055386:CDS |
| TCCGTACGCCTGTGATTTCA+TGG | 0.367615 | 8.1:+86823509 | None:intergenic |
| AACAAATGTAGTTGACAAAT+AGG | 0.368964 | 8.1:+86824455 | None:intergenic |
| GGCATCCTCAAGAGAAATTT+GGG | 0.376671 | 8.1:-86819202 | MS.gene055386:CDS |
| AACGGGATGTTGCGGCGATT+CGG | 0.381474 | 8.1:+86827180 | None:intergenic |
| TTCCAGTTGCAACCCAATCT+AGG | 0.382014 | 8.1:+86820533 | None:intergenic |
| AAAAGAAAGCTGCATCTTAC+GGG | 0.389632 | 8.1:-86816811 | MS.gene055386:CDS |
| AGAAGAACGTACCGGAATAT+CGG | 0.390648 | 8.1:+86827087 | None:intergenic |
| TGTTACTTCATCCAGTCATT+TGG | 0.393585 | 8.1:-86818351 | MS.gene055386:intron |
| GTTGCAGCAGTTTAGCATAC+TGG | 0.394477 | 8.1:-86812800 | MS.gene055386:intron |
| CCCCTAGATTGGGTTGCAAC+TGG | 0.396364 | 8.1:-86820535 | MS.gene055386:CDS |
| CAAAAGAAAGCTGCATCTTA+CGG | 0.397265 | 8.1:-86816812 | MS.gene055386:CDS |
| CTAACGCACCTTCTTGCTTC+CGG | 0.398045 | 8.1:+86823441 | None:intergenic |
| AAGAGTTTGCGACAAAGATT+AGG | 0.401400 | 8.1:-86813556 | MS.gene055386:CDS |
| GAAGCAATCCAGCGCTGAAC+AGG | 0.403247 | 8.1:-86820588 | MS.gene055386:CDS |
| GAAGAAGGAGAAGGTTGAAC+GGG | 0.406043 | 8.1:+86827163 | None:intergenic |
| GTACGGAGGGCAAAGACAGC+TGG | 0.410767 | 8.1:-86823493 | MS.gene055386:CDS |
| AATATCGAGTTTATAGGAAC+AGG | 0.413740 | 8.1:-86818527 | MS.gene055386:intron |
| TCCAGAAATATCGAGTTTAT+AGG | 0.414688 | 8.1:-86818533 | MS.gene055386:CDS |
| AACACTGTGAATAGCATTGA+TGG | 0.415243 | 8.1:+86813637 | None:intergenic |
| AAACCCATTCTCTTGGCTGC+TGG | 0.418508 | 8.1:+86820834 | None:intergenic |
| CTGGAACAACTATCAATATA+GGG | 0.421815 | 8.1:+86820612 | None:intergenic |
| TCCTTCGGACATAGCGTGGC+TGG | 0.422739 | 8.1:-86812695 | MS.gene055386:CDS |
| TCCTTCTCCGATGGCTTCTA+CGG | 0.425635 | 8.1:-86827215 | None:intergenic |
| CAACACACGTATAAGCTTCT+GGG | 0.427188 | 8.1:+86819648 | None:intergenic |
| TCTTCACTCTTTAATGCATC+CGG | 0.449257 | 8.1:+86826102 | None:intergenic |
| GGATATAATCTCAATGGCAT+TGG | 0.463282 | 8.1:+86823462 | None:intergenic |
| GATATAATCTCAATGGCATT+GGG | 0.467582 | 8.1:+86823463 | None:intergenic |
| CATATGTATATGTTGAGGTC+TGG | 0.468954 | 8.1:+86812768 | None:intergenic |
| TAGGAGAGGAATTGGAAGAA+TGG | 0.473064 | 8.1:+86827125 | None:intergenic |
| TCCAGTTGCAACCCAATCTA+GGG | 0.475238 | 8.1:+86820534 | None:intergenic |
| CAGGATCAAAGTAATCCTAC+AGG | 0.477554 | 8.1:-86813680 | MS.gene055386:CDS |
| TAATTCTATTTGCAAAGACT+TGG | 0.484156 | 8.1:-86820660 | MS.gene055386:CDS |
| CTGCTGTTCCATAATTGCTC+TGG | 0.485873 | 8.1:+86823218 | None:intergenic |
| TAATGACGGATGGTTGAGAC+AGG | 0.487160 | 8.1:-86823250 | MS.gene055386:CDS |
| ATCCTATTCATAAAGTCTAC+AGG | 0.488047 | 8.1:+86812739 | None:intergenic |
| ACAAGAAAGTAATCTGCATA+AGG | 0.488155 | 8.1:+86818296 | None:intergenic |
| GTCAGCAACCTGTTCAGCGC+TGG | 0.489926 | 8.1:+86820580 | None:intergenic |
| GCAAACTCTTTGAACAAAGA+TGG | 0.490281 | 8.1:+86813569 | None:intergenic |
| GTTTAGCATACTGGTGCTCT+TGG | 0.495145 | 8.1:-86812791 | MS.gene055386:CDS |
| CTCCTGTAGACTTTATGAAT+AGG | 0.495569 | 8.1:-86812741 | MS.gene055386:CDS |
| TAAAAGCTTCATCACGGGAT+AGG | 0.501721 | 8.1:+86823280 | None:intergenic |
| AATGCCATTGAGATTATATC+CGG | 0.504654 | 8.1:-86823460 | MS.gene055386:CDS |
| AGAAACTTCAGAAGGATCTC+AGG | 0.506426 | 8.1:-86813699 | MS.gene055386:CDS |
| AAATCACTCACTTCTTCTTG+TGG | 0.514279 | 8.1:+86826057 | None:intergenic |
| TATAGGGTCTTCTCCAGTAA+TGG | 0.517274 | 8.1:+86820628 | None:intergenic |
| GAGTCCAGCAGCCAAGAGAA+TGG | 0.519387 | 8.1:-86820838 | MS.gene055386:CDS |
| CACTCACTTCTTCTTGTGGA+AGG | 0.524080 | 8.1:+86826061 | None:intergenic |
| AGTCCAGCAGCCAAGAGAAT+GGG | 0.524134 | 8.1:-86820837 | MS.gene055386:CDS |
| CAGAGCAATTATGGAACAGC+AGG | 0.528502 | 8.1:-86823217 | MS.gene055386:intron |
| CTCGATATTTCTGGACCTCA+TGG | 0.533083 | 8.1:+86818541 | None:intergenic |
| TTCCCAGGGGCTGTGGAATG+TGG | 0.534141 | 8.1:-86816853 | MS.gene055386:intron |
| AATTCTATTTGCAAAGACTT+GGG | 0.539596 | 8.1:-86820659 | MS.gene055386:CDS |
| GATGTAGTTTGCCTCCCTGT+AGG | 0.539808 | 8.1:+86813665 | None:intergenic |
| AGCTTCATCACGGGATAGGA+AGG | 0.541458 | 8.1:+86823284 | None:intergenic |
| TTTGATAGAGAAGCAAAGAC+GGG | 0.542139 | 8.1:-86813722 | MS.gene055386:CDS |
| TGGAGTGACTAGAAGTCCTT+CGG | 0.543558 | 8.1:-86812710 | MS.gene055386:CDS |
| TGTAGACTTTATGAATAGGA+TGG | 0.553506 | 8.1:-86812737 | MS.gene055386:CDS |
| GGAAGAATGGTTACGATCAA+CGG | 0.558320 | 8.1:+86827138 | None:intergenic |
| TAATCTTAAAAGCTTCATCA+CGG | 0.558595 | 8.1:+86823274 | None:intergenic |
| TGCAGATTACTTTCTTGTCG+AGG | 0.560152 | 8.1:-86818291 | MS.gene055386:intron |
| TACGCCTGTGATTTCATGGA+GGG | 0.562013 | 8.1:+86823513 | None:intergenic |
| TTAAGATTATTAATGACGGA+TGG | 0.566095 | 8.1:-86823260 | MS.gene055386:CDS |
| TACGGAGGGCAAAGACAGCT+GGG | 0.568120 | 8.1:-86823492 | MS.gene055386:CDS |
| GGGATGTTGCGGCGATTCGG+CGG | 0.568369 | 8.1:+86827183 | None:intergenic |
| GCTTCCGGATATAATCTCAA+TGG | 0.570356 | 8.1:+86823456 | None:intergenic |
| ATCAATGCTATTCACAGTGT+TGG | 0.570435 | 8.1:-86813635 | MS.gene055386:CDS |
| CCTTAAAGATGAGATGTACA+TGG | 0.574672 | 8.1:-86812656 | MS.gene055386:CDS |
| AATCTTAAAAGCTTCATCAC+GGG | 0.579201 | 8.1:+86823275 | None:intergenic |
| GGAAGAAGGAGAAGGTTGAA+CGG | 0.582618 | 8.1:+86827162 | None:intergenic |
| GCATACCCAAATTTCTCTTG+AGG | 0.583068 | 8.1:+86819197 | None:intergenic |
| GGGTCTTCTCCAGTAATGGA+TGG | 0.584010 | 8.1:+86820632 | None:intergenic |
| ATTCCCCTCCATGAAATCAC+AGG | 0.592238 | 8.1:-86823517 | MS.gene055386:CDS |
| TCCAGCCACGCTATGTCCGA+AGG | 0.593074 | 8.1:+86812694 | None:intergenic |
| TTACGATCAACGGAGGAAGA+AGG | 0.594450 | 8.1:+86827148 | None:intergenic |
| TCCATGAAATCACAGGCGTA+CGG | 0.594751 | 8.1:-86823510 | MS.gene055386:CDS |
| TATGTGTGAGTCAGGAGCAA+AGG | 0.595228 | 8.1:-86820683 | MS.gene055386:intron |
| ATTGGGTTGCAACTGGAATG+AGG | 0.595612 | 8.1:-86820528 | MS.gene055386:CDS |
| GATTATATCCGGAAGCAAGA+AGG | 0.598222 | 8.1:-86823449 | MS.gene055386:intron |
| CTTACGGGTATATGTGAATG+TGG | 0.600531 | 8.1:-86816796 | MS.gene055386:CDS |
| TGAAATCACAGGCGTACGGA+GGG | 0.610233 | 8.1:-86823506 | MS.gene055386:CDS |
| GTAAAGACGCTTATGCATTG+TGG | 0.610779 | 8.1:-86814044 | MS.gene055386:CDS |
| AGATGTACATGGTTGAGACT+AGG | 0.612127 | 8.1:-86812645 | MS.gene055386:CDS |
| ATGAAATCACAGGCGTACGG+AGG | 0.615317 | 8.1:-86823507 | MS.gene055386:CDS |
| GAAGGTTGAACGGGATGTTG+CGG | 0.624022 | 8.1:+86827172 | None:intergenic |
| GTGAATAGCATTGATGGCAT+CGG | 0.632862 | 8.1:+86813643 | None:intergenic |
| GGGTTCATATGTATATGTTG+AGG | 0.633315 | 8.1:+86812763 | None:intergenic |
| GCAACAGCCGTAGAAGCCAT+CGG | 0.639195 | 8.1:+86827208 | None:intergenic |
| GAAGTCCTTCGGACATAGCG+TGG | 0.641739 | 8.1:-86812699 | MS.gene055386:CDS |
| GAGAAGAACCTTGTAAAACA+AGG | 0.642003 | 8.1:-86813902 | MS.gene055386:intron |
| TTTATGAATAGGATGGACAA+TGG | 0.645980 | 8.1:-86812730 | MS.gene055386:CDS |
| TCAACGGAGGAAGAAGGAGA+AGG | 0.648130 | 8.1:+86827154 | None:intergenic |
| TTATGCATTGTGGATAAACA+TGG | 0.651302 | 8.1:-86814034 | MS.gene055386:intron |
| TTCTGATGTACTCTACAATG+AGG | 0.652306 | 8.1:-86820788 | MS.gene055386:CDS |
| GTACGCCTGTGATTTCATGG+AGG | 0.661130 | 8.1:+86823512 | None:intergenic |
| AAGACGGGAGAAACTTCAGA+AGG | 0.663194 | 8.1:-86813707 | MS.gene055386:CDS |
| AACACACGTATAAGCTTCTG+GGG | 0.665125 | 8.1:+86819649 | None:intergenic |
| CCAGTTGCAACCCAATCTAG+GGG | 0.667272 | 8.1:+86820535 | None:intergenic |
| AGACTAGGCTTGAAAGAATG+CGG | 0.670699 | 8.1:-86812630 | MS.gene055386:CDS |
| CTATTCATAAAGTCTACAGG+AGG | 0.672906 | 8.1:+86812742 | None:intergenic |
| GAGTCTTATCGTAAAAGATG+CGG | 0.676267 | 8.1:-86819431 | MS.gene055386:CDS |
| AGGATCAAAGTAATCCTACA+GGG | 0.678381 | 8.1:-86813679 | MS.gene055386:CDS |
| TATTCATAAAGTCTACAGGA+GGG | 0.680454 | 8.1:+86812743 | None:intergenic |
| ACGCCTGTGATTTCATGGAG+GGG | 0.696719 | 8.1:+86823514 | None:intergenic |
| AAAATCGGGTGGCTGCCATG+AGG | 0.716133 | 8.1:-86818556 | MS.gene055386:CDS |
| GTGGAATGTGGAGAGAGACA+AGG | 0.719709 | 8.1:-86816841 | MS.gene055386:CDS |
| AGAATGGTTACGATCAACGG+AGG | 0.730287 | 8.1:+86827141 | None:intergenic |
| AATGACGGATGGTTGAGACA+GGG | 0.735151 | 8.1:-86823249 | MS.gene055386:CDS |
| CAGTTGCAACCCAATCTAGG+GGG | 0.736768 | 8.1:+86820536 | None:intergenic |
| GGGTTGCAACTGGAATGAGG+AGG | 0.737069 | 8.1:-86820525 | MS.gene055386:CDS |
| ATCAAAGTAATCCTACAGGG+AGG | 0.739664 | 8.1:-86813676 | MS.gene055386:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 86812579 | 86827227 | 86812579 | ID=MS.gene055386 |
| chr8.1 | mRNA | 86812579 | 86827227 | 86812579 | ID=MS.gene055386.t1;Parent=MS.gene055386 |
| chr8.1 | exon | 86827099 | 86827227 | 86827099 | ID=MS.gene055386.t1.exon1;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86827099 | 86827227 | 86827099 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86826068 | 86826127 | 86826068 | ID=MS.gene055386.t1.exon2;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86826068 | 86826127 | 86826068 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86824674 | 86824724 | 86824674 | ID=MS.gene055386.t1.exon3;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86824674 | 86824724 | 86824674 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86824423 | 86824488 | 86824423 | ID=MS.gene055386.t1.exon4;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86824423 | 86824488 | 86824423 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86823450 | 86823545 | 86823450 | ID=MS.gene055386.t1.exon5;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86823450 | 86823545 | 86823450 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86823218 | 86823319 | 86823218 | ID=MS.gene055386.t1.exon6;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86823218 | 86823319 | 86823218 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86820772 | 86820872 | 86820772 | ID=MS.gene055386.t1.exon7;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86820772 | 86820872 | 86820772 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86820507 | 86820691 | 86820507 | ID=MS.gene055386.t1.exon8;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86820507 | 86820691 | 86820507 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86819631 | 86819671 | 86819631 | ID=MS.gene055386.t1.exon9;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86819631 | 86819671 | 86819631 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86819423 | 86819510 | 86819423 | ID=MS.gene055386.t1.exon10;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86819423 | 86819510 | 86819423 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86819156 | 86819242 | 86819156 | ID=MS.gene055386.t1.exon11;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86819156 | 86819242 | 86819156 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86818528 | 86818582 | 86818528 | ID=MS.gene055386.t1.exon12;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86818528 | 86818582 | 86818528 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86818292 | 86818358 | 86818292 | ID=MS.gene055386.t1.exon13;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86818292 | 86818358 | 86818292 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86816769 | 86816868 | 86816769 | ID=MS.gene055386.t1.exon14;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86816769 | 86816868 | 86816769 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86814035 | 86814096 | 86814035 | ID=MS.gene055386.t1.exon15;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86814035 | 86814096 | 86814035 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86813903 | 86813942 | 86813903 | ID=MS.gene055386.t1.exon16;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86813903 | 86813942 | 86813903 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86813484 | 86813788 | 86813484 | ID=MS.gene055386.t1.exon17;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86813484 | 86813788 | 86813484 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| chr8.1 | exon | 86812579 | 86812815 | 86812579 | ID=MS.gene055386.t1.exon18;Parent=MS.gene055386.t1 |
| chr8.1 | CDS | 86812579 | 86812815 | 86812579 | ID=cds.MS.gene055386.t1;Parent=MS.gene055386.t1 |
| Gene Sequence |
| Protein sequence |
