Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057696.t1 | XP_013456473.1 | 99.6 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 2.90E-121 | 444.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057696.t1 | O49605 | 78.5 | 223 | 47 | 1 | 1 | 222 | 1 | 223 | 1.2e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057696.t1 | I3S543 | 99.6 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 2.1e-121 | 444.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057696 | MS.gene048458 | PPI |
| MS.gene057696 | MS.gene04515 | PPI |
| MS.gene057696 | MS.gene04526 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057696.t1 | MTR_4g073650 | 99.552 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 3.13e-164 | 452 |
| MS.gene057696.t1 | MTR_3g463900 | 60.541 | 185 | 72 | 1 | 31 | 215 | 19 | 202 | 2.63e-79 | 236 |
| MS.gene057696.t1 | MTR_3g070500 | 58.791 | 182 | 73 | 2 | 34 | 214 | 51 | 231 | 4.84e-73 | 221 |
| MS.gene057696.t1 | MTR_7g116340 | 55.357 | 168 | 74 | 1 | 47 | 214 | 5 | 171 | 1.20e-62 | 193 |
| MS.gene057696.t1 | MTR_4g075290 | 53.216 | 171 | 79 | 1 | 44 | 214 | 2 | 171 | 9.71e-61 | 188 |
| MS.gene057696.t1 | MTR_1g085560 | 53.977 | 176 | 73 | 2 | 41 | 215 | 80 | 248 | 1.08e-60 | 191 |
| MS.gene057696.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 3.87e-60 | 191 |
| MS.gene057696.t1 | MTR_3g117750 | 54.762 | 168 | 75 | 1 | 47 | 214 | 13 | 179 | 4.84e-60 | 187 |
| MS.gene057696.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 5.58e-60 | 191 |
| MS.gene057696.t1 | MTR_4g086760 | 56.000 | 175 | 76 | 1 | 47 | 220 | 5 | 179 | 9.22e-60 | 192 |
| MS.gene057696.t1 | MTR_8g079690 | 57.396 | 169 | 71 | 1 | 47 | 214 | 5 | 173 | 1.00e-59 | 192 |
| MS.gene057696.t1 | MTR_1g117010 | 49.485 | 194 | 88 | 2 | 25 | 215 | 56 | 242 | 2.44e-59 | 187 |
| MS.gene057696.t1 | MTR_1g117010 | 49.485 | 194 | 88 | 2 | 25 | 215 | 56 | 242 | 2.44e-59 | 187 |
| MS.gene057696.t1 | MTR_7g110980 | 48.128 | 187 | 90 | 1 | 29 | 215 | 79 | 258 | 4.51e-59 | 187 |
| MS.gene057696.t1 | MTR_7g095750 | 55.814 | 172 | 74 | 2 | 48 | 218 | 9 | 179 | 1.64e-56 | 190 |
| MS.gene057696.t1 | MTR_3g070500 | 58.696 | 138 | 56 | 1 | 34 | 170 | 51 | 188 | 2.66e-55 | 175 |
| MS.gene057696.t1 | MTR_8g040180 | 47.619 | 168 | 85 | 2 | 48 | 214 | 20 | 185 | 1.30e-48 | 157 |
| MS.gene057696.t1 | MTR_3g070500 | 53.913 | 115 | 52 | 1 | 34 | 147 | 51 | 165 | 1.18e-39 | 134 |
| MS.gene057696.t1 | MTR_3g070500 | 55.455 | 110 | 48 | 1 | 34 | 142 | 51 | 160 | 1.49e-39 | 134 |
| MS.gene057696.t1 | MTR_3g107660 | 46.707 | 167 | 87 | 2 | 48 | 213 | 12 | 177 | 3.16e-39 | 144 |
| MS.gene057696.t1 | MTR_1g011980 | 47.904 | 167 | 84 | 3 | 48 | 213 | 9 | 173 | 1.05e-38 | 142 |
| MS.gene057696.t1 | MTR_2g085075 | 42.500 | 160 | 79 | 4 | 59 | 217 | 470 | 617 | 2.01e-31 | 120 |
| MS.gene057696.t1 | MTR_8g036015 | 44.853 | 136 | 63 | 4 | 58 | 192 | 8 | 132 | 2.45e-27 | 102 |
| MS.gene057696.t1 | MTR_7g105220 | 40.458 | 131 | 66 | 3 | 59 | 188 | 18 | 137 | 7.60e-27 | 101 |
| MS.gene057696.t1 | MTR_5g015500 | 42.000 | 150 | 75 | 4 | 60 | 208 | 314 | 452 | 3.46e-25 | 103 |
| MS.gene057696.t1 | MTR_2g023120 | 45.522 | 134 | 58 | 5 | 60 | 191 | 22 | 142 | 3.81e-25 | 102 |
| MS.gene057696.t1 | MTR_5g015500 | 42.000 | 150 | 75 | 4 | 60 | 208 | 354 | 492 | 4.76e-25 | 102 |
| MS.gene057696.t1 | MTR_3g085705 | 40.678 | 118 | 58 | 2 | 85 | 202 | 20 | 125 | 4.06e-21 | 85.5 |
| MS.gene057696.t1 | MTR_6g084140 | 34.591 | 159 | 84 | 5 | 59 | 208 | 9 | 156 | 1.14e-18 | 84.3 |
| MS.gene057696.t1 | MTR_6g084140 | 34.591 | 159 | 84 | 5 | 59 | 208 | 26 | 173 | 1.21e-18 | 84.3 |
| MS.gene057696.t1 | MTR_8g442420 | 33.962 | 159 | 85 | 5 | 59 | 208 | 9 | 156 | 1.43e-17 | 81.3 |
| MS.gene057696.t1 | MTR_2g461260 | 27.143 | 210 | 94 | 8 | 41 | 206 | 53 | 247 | 1.46e-13 | 68.6 |
| MS.gene057696.t1 | MTR_1g035360 | 29.108 | 213 | 110 | 7 | 18 | 210 | 32 | 223 | 4.95e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057696.t1 | AT4G34960 | 78.475 | 223 | 47 | 1 | 1 | 222 | 1 | 223 | 4.59e-124 | 350 |
| MS.gene057696.t1 | AT4G34960 | 75.439 | 171 | 41 | 1 | 1 | 170 | 1 | 171 | 1.65e-87 | 256 |
| MS.gene057696.t1 | AT2G29960 | 59.799 | 199 | 76 | 2 | 17 | 215 | 6 | 200 | 3.44e-81 | 241 |
| MS.gene057696.t1 | AT2G29960 | 59.799 | 199 | 76 | 2 | 17 | 215 | 6 | 200 | 3.44e-81 | 241 |
| MS.gene057696.t1 | AT5G58710 | 60.440 | 182 | 71 | 1 | 34 | 215 | 23 | 203 | 1.02e-77 | 232 |
| MS.gene057696.t1 | AT2G29960 | 56.784 | 199 | 72 | 3 | 17 | 215 | 6 | 190 | 1.76e-74 | 224 |
| MS.gene057696.t1 | AT3G55920 | 52.074 | 217 | 87 | 3 | 14 | 214 | 11 | 226 | 5.66e-71 | 216 |
| MS.gene057696.t1 | AT5G13120 | 52.821 | 195 | 82 | 2 | 27 | 218 | 67 | 254 | 1.19e-66 | 206 |
| MS.gene057696.t1 | AT5G13120 | 52.821 | 195 | 82 | 2 | 27 | 218 | 71 | 258 | 1.67e-66 | 206 |
| MS.gene057696.t1 | AT3G56070 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 4.85e-64 | 197 |
| MS.gene057696.t1 | AT3G56070 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 4.85e-64 | 197 |
| MS.gene057696.t1 | AT4G38740 | 55.952 | 168 | 73 | 1 | 47 | 214 | 5 | 171 | 6.12e-64 | 196 |
| MS.gene057696.t1 | AT2G21130 | 57.738 | 168 | 70 | 1 | 47 | 214 | 6 | 172 | 2.72e-63 | 195 |
| MS.gene057696.t1 | AT4G34870 | 55.357 | 168 | 74 | 1 | 47 | 214 | 5 | 171 | 8.29e-62 | 191 |
| MS.gene057696.t1 | AT2G15790 | 57.895 | 171 | 71 | 1 | 47 | 216 | 5 | 175 | 2.02e-61 | 196 |
| MS.gene057696.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 83 | 256 | 8.20e-61 | 191 |
| MS.gene057696.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 84 | 257 | 8.63e-61 | 191 |
| MS.gene057696.t1 | AT3G62030 | 50.829 | 181 | 82 | 1 | 35 | 215 | 137 | 310 | 3.18e-60 | 191 |
| MS.gene057696.t1 | AT2G16600 | 52.976 | 168 | 78 | 1 | 47 | 214 | 6 | 172 | 1.06e-58 | 183 |
| MS.gene057696.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 1.28e-54 | 179 |
| MS.gene057696.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene057696.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene057696.t1 | AT3G63400 | 55.357 | 168 | 73 | 2 | 48 | 214 | 9 | 175 | 7.90e-53 | 179 |
| MS.gene057696.t1 | AT2G38730 | 45.833 | 168 | 88 | 2 | 48 | 214 | 34 | 199 | 1.72e-45 | 150 |
| MS.gene057696.t1 | AT2G16600 | 45.833 | 168 | 68 | 2 | 47 | 214 | 6 | 150 | 1.37e-43 | 144 |
| MS.gene057696.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene057696.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene057696.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene057696.t1 | AT4G32420 | 47.305 | 167 | 86 | 2 | 48 | 213 | 9 | 174 | 8.56e-39 | 142 |
| MS.gene057696.t1 | AT4G32420 | 48.630 | 146 | 74 | 1 | 48 | 192 | 9 | 154 | 1.18e-37 | 139 |
| MS.gene057696.t1 | AT3G22920 | 43.860 | 171 | 85 | 5 | 47 | 214 | 5 | 167 | 2.16e-35 | 125 |
| MS.gene057696.t1 | AT3G44600 | 42.500 | 160 | 79 | 4 | 59 | 217 | 484 | 631 | 8.07e-31 | 119 |
| MS.gene057696.t1 | AT1G01940 | 45.588 | 136 | 62 | 4 | 58 | 192 | 8 | 132 | 3.70e-28 | 104 |
| MS.gene057696.t1 | AT2G36130 | 41.221 | 131 | 65 | 3 | 59 | 188 | 18 | 137 | 9.18e-28 | 103 |
| MS.gene057696.t1 | AT4G33060 | 45.600 | 125 | 55 | 4 | 60 | 182 | 22 | 135 | 2.98e-27 | 108 |
| MS.gene057696.t1 | AT5G67530 | 42.484 | 153 | 76 | 4 | 60 | 211 | 353 | 494 | 1.90e-26 | 107 |
| MS.gene057696.t1 | AT1G53720 | 33.962 | 159 | 85 | 5 | 59 | 208 | 9 | 156 | 7.81e-18 | 81.3 |
| MS.gene057696.t1 | AT1G53720 | 34.591 | 159 | 84 | 6 | 59 | 208 | 9 | 156 | 3.00e-17 | 80.1 |
| MS.gene057696.t1 | AT5G35100 | 30.366 | 191 | 81 | 6 | 44 | 192 | 50 | 230 | 1.98e-12 | 65.5 |
| MS.gene057696.t1 | AT5G35100 | 30.366 | 191 | 81 | 6 | 44 | 192 | 50 | 230 | 1.98e-12 | 65.5 |
Find 48 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCCAGACGAGAATTTC+AGG | 0.190065 | 4.4:-35692180 | MS.gene057696:CDS |
| CGCATTCTCTGCTTCTAAAT+TGG | 0.208778 | 4.4:-35694836 | MS.gene057696:intron |
| CCATTTCATCGGATAGTATC+TGG | 0.290312 | 4.4:-35692271 | MS.gene057696:CDS |
| AAAACTCTATGTGTAATTTC+AGG | 0.328445 | 4.4:+35693031 | None:intergenic |
| CTTCCTCGGTTTCCCACTAT+AGG | 0.329905 | 4.4:+35691672 | None:intergenic |
| GATATTGATAAACAGCGTTT+AGG | 0.342954 | 4.4:-35692998 | MS.gene057696:intron |
| AGGATCGTGATTGGATTATA+TGG | 0.372648 | 4.4:-35692781 | MS.gene057696:CDS |
| AACTGTGAACCGTTGGAATC+AGG | 0.372964 | 4.4:+35691966 | None:intergenic |
| GATTGCAGGCGTTGTCTCTA+TGG | 0.374529 | 4.4:-35692000 | MS.gene057696:intron |
| TCCTCGTCCCACTTGCTCTT+CGG | 0.389846 | 4.4:+35691619 | None:intergenic |
| CCAGATACTATCCGATGAAA+TGG | 0.402366 | 4.4:+35692271 | None:intergenic |
| GTTGTCTCTATGGCTAATTC+AGG | 0.429788 | 4.4:-35691990 | MS.gene057696:CDS |
| TACAAATTTGATAGGTTGGA+TGG | 0.436162 | 4.4:-35691766 | MS.gene057696:intron |
| AAAGCATCCGAATCTATTTA+CGG | 0.448536 | 4.4:-35692208 | MS.gene057696:CDS |
| TCTGCAGGTAGGATCGTGAT+TGG | 0.453737 | 4.4:-35692790 | MS.gene057696:intron |
| AGAGAACAAGGAGGAGAATG+AGG | 0.453892 | 4.4:+35694875 | None:intergenic |
| GGTGTAAAACTTCATTATAA+AGG | 0.459312 | 4.4:-35692298 | MS.gene057696:CDS |
| TTAATCCTGAAATTCTCGTC+TGG | 0.460676 | 4.4:+35692175 | None:intergenic |
| CCATATTGTGTAGGGGAGAA+AGG | 0.471502 | 4.4:-35692334 | MS.gene057696:intron |
| AAGGTAGTGATTGCGGACTC+TGG | 0.481336 | 4.4:-35691649 | MS.gene057696:CDS |
| AGGATTAAACATTCTCATGC+TGG | 0.482834 | 4.4:-35692160 | MS.gene057696:intron |
| GCAATCACTACCTTCTTCCT+CGG | 0.508012 | 4.4:+35691658 | None:intergenic |
| GGTGCCACCGTAAATAGATT+CGG | 0.518595 | 4.4:+35692201 | None:intergenic |
| GATACCGTATTTGCAATTGA+AGG | 0.526063 | 4.4:-35691706 | MS.gene057696:CDS |
| TGGCAAGGTTGTTCAAGGCA+TGG | 0.547061 | 4.4:-35691728 | MS.gene057696:CDS |
| ATACCGTATTTGCAATTGAA+GGG | 0.553217 | 4.4:-35691705 | MS.gene057696:CDS |
| CCTGAAATTCTCGTCTGGAA+AGG | 0.563449 | 4.4:+35692180 | None:intergenic |
| TAATGAAAATTGAGAGAACA+AGG | 0.563578 | 4.4:+35694863 | None:intergenic |
| GAGAGATACCGAAGAGCAAG+TGG | 0.564077 | 4.4:-35691627 | MS.gene057696:CDS |
| ATAAAGGAACACCATTTCAT+CGG | 0.570046 | 4.4:-35692282 | MS.gene057696:CDS |
| GGAGATATTGTTCATCGTGA+TGG | 0.573728 | 4.4:-35692232 | MS.gene057696:CDS |
| ACCGAAGAGCAAGTGGGACG+AGG | 0.574878 | 4.4:-35691620 | MS.gene057696:CDS |
| TACCGTATTTGCAATTGAAG+GGG | 0.577885 | 4.4:-35691704 | MS.gene057696:CDS |
| TAGTGGGAAACCGAGGAAGA+AGG | 0.584123 | 4.4:-35691668 | MS.gene057696:CDS |
| GAGAAAGGCGAGAGTGCAAG+TGG | 0.602323 | 4.4:-35692319 | MS.gene057696:CDS |
| GGGGAGCTGGAACCTATAGT+GGG | 0.603118 | 4.4:-35691684 | MS.gene057696:CDS |
| GGCAGATGAGAAAACAGAAG+AGG | 0.611503 | 4.4:-35693056 | MS.gene057696:CDS |
| TTACCACAGTGAAGGCCAGT+TGG | 0.614315 | 4.4:-35691938 | MS.gene057696:intron |
| AATTCAGGACCTGATTCCAA+CGG | 0.636612 | 4.4:-35691975 | MS.gene057696:CDS |
| GAGGAAGAAGGTAGTGATTG+CGG | 0.640776 | 4.4:-35691656 | MS.gene057696:CDS |
| AGGAGGAGAATGAGGAATCG+AGG | 0.641912 | 4.4:+35694883 | None:intergenic |
| ACCGTATTTGCAATTGAAGG+GGG | 0.647013 | 4.4:-35691703 | MS.gene057696:CDS |
| TGAAAATTGAGAGAACAAGG+AGG | 0.658859 | 4.4:+35694866 | None:intergenic |
| GAACCTATAGTGGGAAACCG+AGG | 0.686763 | 4.4:-35691675 | MS.gene057696:CDS |
| AGAGATACCGAAGAGCAAGT+GGG | 0.699903 | 4.4:-35691626 | MS.gene057696:CDS |
| GATTGGATTATATGGCCAAG+TGG | 0.703755 | 4.4:-35692773 | MS.gene057696:CDS |
| TTACCAACTGGCCTTCACTG+TGG | 0.710194 | 4.4:+35691935 | None:intergenic |
| GCATCCGAATCTATTTACGG+TGG | 0.747499 | 4.4:-35692205 | MS.gene057696:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAGTATTTCATTTTATT+AGG | - | chr4.4:35694408-35694427 | MS.gene057696:intron | 10.0% |
| !! | AATTTCATTACAAATTTGAT+AGG | - | chr4.4:35694751-35694770 | MS.gene057696:intron | 15.0% |
| !!! | AGTTTTTGATATTCTTATTA+AGG | - | chr4.4:35692057-35692076 | MS.gene057696:intron | 15.0% |
| !!! | GAAACCAAATATAATAATTT+TGG | - | chr4.4:35693120-35693139 | MS.gene057696:intron | 15.0% |
| !!! | TTTCCTTTTTACTATTAATA+AGG | - | chr4.4:35693695-35693714 | MS.gene057696:intron | 15.0% |
| !! | AAAAAGAAGAAAAAGTTGTT+AGG | + | chr4.4:35693556-35693575 | None:intergenic | 20.0% |
| !! | ACTGCAATATATATACAAAA+GGG | + | chr4.4:35691728-35691747 | None:intergenic | 20.0% |
| !! | ATATTTAATGAACAACATGA+AGG | + | chr4.4:35694128-35694147 | None:intergenic | 20.0% |
| !! | CTCAAAAATGACAAAAAAAA+TGG | + | chr4.4:35694458-35694477 | None:intergenic | 20.0% |
| !! | TAAAAGAACCTTACTATATT+AGG | + | chr4.4:35693251-35693270 | None:intergenic | 20.0% |
| !! | TGCTCCAAAATTATTATATT+TGG | + | chr4.4:35693127-35693146 | None:intergenic | 20.0% |
| !! | TTAAACTTAAAAGAATGAGT+CGG | + | chr4.4:35693217-35693236 | None:intergenic | 20.0% |
| !! | TTTATGTTTCTTCTATTGTA+AGG | + | chr4.4:35693841-35693860 | None:intergenic | 20.0% |
| !! | TTTGATATTCTTATTAAGGT+GGG | - | chr4.4:35692061-35692080 | MS.gene057696:intron | 20.0% |
| !!! | AATTTTGAACAATTTAGACT+CGG | - | chr4.4:35694636-35694655 | MS.gene057696:intron | 20.0% |
| !!! | AGAAGTATGAAATTAGTTAA+TGG | - | chr4.4:35692098-35692117 | MS.gene057696:intron | 20.0% |
| !!! | ATCAGACTCTTATTTATATT+TGG | - | chr4.4:35693098-35693117 | MS.gene057696:intron | 20.0% |
| !!! | CATTTTTTTTGTCATTTTTG+AGG | - | chr4.4:35694456-35694475 | MS.gene057696:intron | 20.0% |
| !!! | GATAGATTGATAATAGTTTA+AGG | - | chr4.4:35692827-35692846 | MS.gene057696:intron | 20.0% |
| !!! | TTTTGATATTCTTATTAAGG+TGG | - | chr4.4:35692060-35692079 | MS.gene057696:intron | 20.0% |
| !!! | TTTTTACTATTAATAAGGTG+CGG | - | chr4.4:35693700-35693719 | MS.gene057696:intron | 20.0% |
| ! | AAAACTCTATGTGTAATTTC+AGG | + | chr4.4:35693497-35693516 | None:intergenic | 25.0% |
| ! | AAAGTGATGAAGTAAGATAA+AGG | - | chr4.4:35692706-35692725 | MS.gene057696:intron | 25.0% |
| ! | AAATGACAAAAAAAATGGTG+AGG | + | chr4.4:35694453-35694472 | None:intergenic | 25.0% |
| ! | AACTTAAGAAAGTAATGCAA+GGG | + | chr4.4:35691917-35691936 | None:intergenic | 25.0% |
| ! | AAGTGATGAAGTAAGATAAA+GGG | - | chr4.4:35692707-35692726 | MS.gene057696:intron | 25.0% |
| ! | AATTGTTTCCAGCTTATTAT+GGG | - | chr4.4:35693042-35693061 | MS.gene057696:CDS | 25.0% |
| ! | ATATATACAAAAGGGTCATA+AGG | + | chr4.4:35691720-35691739 | None:intergenic | 25.0% |
| ! | ATGATCTAATAGAAATGTGA+TGG | - | chr4.4:35692683-35692702 | MS.gene057696:intron | 25.0% |
| ! | ATTATCTGATTGGAAATGTA+TGG | - | chr4.4:35693350-35693369 | MS.gene057696:intron | 25.0% |
| ! | CAAAATCACTCTCTTAAATA+AGG | - | chr4.4:35692554-35692573 | MS.gene057696:intron | 25.0% |
| ! | GAACTAAGAAAATGTATTAG+AGG | - | chr4.4:35692432-35692451 | MS.gene057696:intron | 25.0% |
| ! | GACTGCAATATATATACAAA+AGG | + | chr4.4:35691729-35691748 | None:intergenic | 25.0% |
| ! | GCACCTTATTAATAGTAAAA+AGG | + | chr4.4:35693701-35693720 | None:intergenic | 25.0% |
| ! | GGTGTAAAACTTCATTATAA+AGG | - | chr4.4:35694227-35694246 | MS.gene057696:intron | 25.0% |
| ! | TAAACTTCGAGTGTTAAAAT+TGG | + | chr4.4:35693311-35693330 | None:intergenic | 25.0% |
| ! | TAATGAAAATTGAGAGAACA+AGG | + | chr4.4:35691665-35691684 | None:intergenic | 25.0% |
| ! | TAATTGTTTCCAGCTTATTA+TGG | - | chr4.4:35693041-35693060 | MS.gene057696:CDS | 25.0% |
| ! | TATATACAAAAGGGTCATAA+GGG | + | chr4.4:35691719-35691738 | None:intergenic | 25.0% |
| ! | TATATATATTGCAGTCATTG+TGG | - | chr4.4:35691733-35691752 | MS.gene057696:CDS | 25.0% |
| ! | TCACATTTCTATTAGATCAT+AGG | + | chr4.4:35692683-35692702 | None:intergenic | 25.0% |
| ! | TCATTACAAATTTGATAGGT+TGG | - | chr4.4:35694755-35694774 | MS.gene057696:intron | 25.0% |
| !! | AAACTGCAATTTTTATTGAC+TGG | - | chr4.4:35694031-35694050 | MS.gene057696:intron | 25.0% |
| !! | AATCATAGTTTCAACTTTTG+AGG | + | chr4.4:35692284-35692303 | None:intergenic | 25.0% |
| !! | AATGTATTAGAGGATGATTT+TGG | - | chr4.4:35692442-35692461 | MS.gene057696:intron | 25.0% |
| !! | AATTACACATAGAGTTTTCT+TGG | - | chr4.4:35693499-35693518 | MS.gene057696:intron | 25.0% |
| !! | ACACAATGTTTGTTAGAAAA+AGG | - | chr4.4:35693614-35693633 | MS.gene057696:intron | 25.0% |
| !! | TTTTTCTAACAAACATTGTG+TGG | + | chr4.4:35693615-35693634 | None:intergenic | 25.0% |
| !!! | AAACTATGATTTTGAAAGAG+GGG | - | chr4.4:35692293-35692312 | MS.gene057696:CDS | 25.0% |
| !!! | AACACTGATTTTCTTATCAA+AGG | + | chr4.4:35693873-35693892 | None:intergenic | 25.0% |
| !!! | ACACTGATTTTCTTATCAAA+GGG | + | chr4.4:35693872-35693891 | None:intergenic | 25.0% |
| !!! | GAAACTATGATTTTGAAAGA+GGG | - | chr4.4:35692292-35692311 | MS.gene057696:CDS | 25.0% |
| !!! | TAATGGATTCAAACTTACAA+CGG | - | chr4.4:35692115-35692134 | MS.gene057696:intron | 25.0% |
| !!! | TATTGTTGTTGATTTGATGA+TGG | - | chr4.4:35691847-35691866 | MS.gene057696:intron | 25.0% |
| !!! | TGAAACTATGATTTTGAAAG+AGG | - | chr4.4:35692291-35692310 | MS.gene057696:CDS | 25.0% |
| !!! | TGTCATTGGTTTTGTATTTT+TGG | - | chr4.4:35693793-35693812 | MS.gene057696:intron | 25.0% |
| AATACATAATCTCCCTAAGT+TGG | - | chr4.4:35692407-35692426 | MS.gene057696:intron | 30.0% | |
| AATCACTCTCTTAAATAAGG+TGG | - | chr4.4:35692557-35692576 | MS.gene057696:intron | 30.0% | |
| ACCTTACTATATTAGGAATG+TGG | + | chr4.4:35693244-35693263 | None:intergenic | 30.0% | |
| ACTCTTGTGTATTATCTGAT+TGG | - | chr4.4:35693340-35693359 | MS.gene057696:intron | 30.0% | |
| ATAAAGGAACACCATTTCAT+CGG | - | chr4.4:35694243-35694262 | MS.gene057696:intron | 30.0% | |
| ATACATAATCTCCCTAAGTT+GGG | - | chr4.4:35692408-35692427 | MS.gene057696:intron | 30.0% | |
| ATACCGTATTTGCAATTGAA+GGG | - | chr4.4:35694820-35694839 | MS.gene057696:intron | 30.0% | |
| ATGCTTAACGATTATAGCTA+TGG | - | chr4.4:35692657-35692676 | MS.gene057696:intron | 30.0% | |
| CAACTTAAGAAAGTAATGCA+AGG | + | chr4.4:35691918-35691937 | None:intergenic | 30.0% | |
| CAATGTCAATGTTGTTAAGT+TGG | - | chr4.4:35691969-35691988 | MS.gene057696:CDS | 30.0% | |
| GATAACATGAATAGTGATGA+TGG | + | chr4.4:35694731-35694750 | None:intergenic | 30.0% | |
| GATATTGATAAACAGCGTTT+AGG | - | chr4.4:35693527-35693546 | MS.gene057696:intron | 30.0% | |
| GTGATTAGATAGTTTGAAGA+CGG | - | chr4.4:35692224-35692243 | MS.gene057696:CDS | 30.0% | |
| TAGACTCATTCTGTAATCAA+AGG | + | chr4.4:35692984-35693003 | None:intergenic | 30.0% | |
| TAGTTTAGGGATCAAATTGA+TGG | - | chr4.4:35692900-35692919 | MS.gene057696:intron | 30.0% | |
| TGTAAAAAGGATTGAGTTAG+TGG | - | chr4.4:35692343-35692362 | MS.gene057696:intron | 30.0% | |
| TTCCATATCAACTGCATATT+GGG | - | chr4.4:35693406-35693425 | MS.gene057696:intron | 30.0% | |
| TTGATATGGAAATCAAAGGT+GGG | + | chr4.4:35693397-35693416 | None:intergenic | 30.0% | |
| TTTCCATATCAACTGCATAT+TGG | - | chr4.4:35693405-35693424 | MS.gene057696:intron | 30.0% | |
| ! | AAAGCATCCGAATCTATTTA+CGG | - | chr4.4:35694317-35694336 | MS.gene057696:intron | 30.0% |
| ! | CAAAACAGAAAAGAGTATGA+TGG | + | chr4.4:35692785-35692804 | None:intergenic | 30.0% |
| ! | TACAAATTTGATAGGTTGGA+TGG | - | chr4.4:35694759-35694778 | MS.gene057696:intron | 30.0% |
| ! | TGTTTGTTAGAAAAAGGATG+AGG | - | chr4.4:35693620-35693639 | MS.gene057696:intron | 30.0% |
| ! | TTAAGAGAGTGATTTTGTAG+AGG | + | chr4.4:35692551-35692570 | None:intergenic | 30.0% |
| ! | TTTTCTTGGAGGAATTTTCA+GGG | + | chr4.4:35692186-35692205 | None:intergenic | 30.0% |
| !! | TAAACTTGCTTCTTTTGTTG+TGG | - | chr4.4:35693171-35693190 | MS.gene057696:intron | 30.0% |
| !!! | TGAATATGATGGGTTGATTT+TGG | + | chr4.4:35693010-35693029 | None:intergenic | 30.0% |
| AAAAACTGTGGGTATGTCAT+TGG | - | chr4.4:35693779-35693798 | MS.gene057696:intron | 35.0% | |
| AAAAGGATTGAGTTAGTGGA+AGG | - | chr4.4:35692347-35692366 | MS.gene057696:intron | 35.0% | |
| AAAGAAAAACTGTGAACCGT+TGG | + | chr4.4:35694569-35694588 | None:intergenic | 35.0% | |
| AAAGGATTGAGTTAGTGGAA+GGG | - | chr4.4:35692348-35692367 | MS.gene057696:intron | 35.0% | |
| AATGTATCTTCCTACATGAC+AGG | + | chr4.4:35694690-35694709 | None:intergenic | 35.0% | |
| AATTAGTGCATGGACCAAAT+GGG | + | chr4.4:35694162-35694181 | None:intergenic | 35.0% | |
| ACTATCTAATCACTGCAATG+TGG | + | chr4.4:35692217-35692236 | None:intergenic | 35.0% | |
| AGGATCGTGATTGGATTATA+TGG | - | chr4.4:35693744-35693763 | MS.gene057696:intron | 35.0% | |
| AGGATTAAACATTCTCATGC+TGG | - | chr4.4:35694365-35694384 | MS.gene057696:intron | 35.0% | |
| AGGCGCATACAAAATATAGT+GGG | + | chr4.4:35693276-35693295 | None:intergenic | 35.0% | |
| AGTGCAAACAGTGAATATGA+TGG | + | chr4.4:35693021-35693040 | None:intergenic | 35.0% | |
| ATGTATGTCGCAATAGCAAT+TGG | + | chr4.4:35693587-35693606 | None:intergenic | 35.0% | |
| ATTTGGTCCATGCACTAATT+AGG | - | chr4.4:35694162-35694181 | MS.gene057696:intron | 35.0% | |
| CTGAAAATTCCTCCAAGAAA+AGG | - | chr4.4:35692185-35692204 | MS.gene057696:CDS | 35.0% | |
| GATACCGTATTTGCAATTGA+AGG | - | chr4.4:35694819-35694838 | MS.gene057696:intron | 35.0% | |
| GCCACATTCCTAATATAGTA+AGG | - | chr4.4:35693240-35693259 | MS.gene057696:intron | 35.0% | |
| GTAAAAACATTGTAGTCCCT+GGG | - | chr4.4:35692930-35692949 | MS.gene057696:intron | 35.0% | |
| GTGCAAACAGTGAATATGAT+GGG | + | chr4.4:35693020-35693039 | None:intergenic | 35.0% | |
| GTTGATATGGAAATCAAAGG+TGG | + | chr4.4:35693398-35693417 | None:intergenic | 35.0% | |
| TAATTAGTGCATGGACCAAA+TGG | + | chr4.4:35694163-35694182 | None:intergenic | 35.0% | |
| TACATAATCTCCCTAAGTTG+GGG | - | chr4.4:35692409-35692428 | MS.gene057696:intron | 35.0% | |
| TACCGTATTTGCAATTGAAG+GGG | - | chr4.4:35694821-35694840 | MS.gene057696:intron | 35.0% | |
| TATTAATCTATCCCCCCATT+TGG | - | chr4.4:35694145-35694164 | MS.gene057696:intron | 35.0% | |
| TGAAAATTGAGAGAACAAGG+AGG | + | chr4.4:35691662-35691681 | None:intergenic | 35.0% | |
| TGACAAAGTAACTTACCAAC+TGG | + | chr4.4:35694605-35694624 | None:intergenic | 35.0% | |
| TTAATCCTGAAATTCTCGTC+TGG | + | chr4.4:35694353-35694372 | None:intergenic | 35.0% | |
| TTGACATTGTCAGTTGAGTT+AGG | + | chr4.4:35691958-35691977 | None:intergenic | 35.0% | |
| ! | AAAACTTGCTCTATGATTGC+AGG | - | chr4.4:35694511-35694530 | MS.gene057696:intron | 35.0% |
| ! | AACCCAATATGCAGTTGATA+TGG | + | chr4.4:35693411-35693430 | None:intergenic | 35.0% |
| ! | AATGACATACCCACAGTTTT+TGG | + | chr4.4:35693780-35693799 | None:intergenic | 35.0% |
| ! | CTTTTCTTGGAGGAATTTTC+AGG | + | chr4.4:35692187-35692206 | None:intergenic | 35.0% |
| ! | GATAAAGGGTTAGAAGTGTA+TGG | - | chr4.4:35692721-35692740 | MS.gene057696:intron | 35.0% |
| ! | GCAGTTGATATGGAAATCAA+AGG | + | chr4.4:35693401-35693420 | None:intergenic | 35.0% |
| ! | GTGATTTTGTAGAGGATGAT+TGG | + | chr4.4:35692543-35692562 | None:intergenic | 35.0% |
| ! | GTTTTTCTTTACCACAGTGA+AGG | - | chr4.4:35694579-35694598 | MS.gene057696:intron | 35.0% |
| ! | TGGTGTGTAACAATTTGCTT+GGG | - | chr4.4:35694385-35694404 | MS.gene057696:intron | 35.0% |
| !! | AAGAGGGGTATCTATACTTT+AGG | - | chr4.4:35692308-35692327 | MS.gene057696:CDS | 35.0% |
| !! | GATGATGGATGAATCTGTTA+TGG | - | chr4.4:35691862-35691881 | MS.gene057696:intron | 35.0% |
| !! | TTTGCCTTTTCTGATGATGT+AGG | - | chr4.4:35693448-35693467 | MS.gene057696:intron | 35.0% |
| !!! | AATTTTAGAGCTTTGTGCAC+AGG | - | chr4.4:35694073-35694092 | MS.gene057696:intron | 35.0% |
| !!! | AGTATCTGGTTTTGTGATTC+AGG | - | chr4.4:35694268-35694287 | MS.gene057696:intron | 35.0% |
| !!! | AGTTTCAACTTTTGAGGCAT+AGG | + | chr4.4:35692278-35692297 | None:intergenic | 35.0% |
| !!! | GTATCTGGTTTTGTGATTCA+GGG | - | chr4.4:35694269-35694288 | MS.gene057696:intron | 35.0% |
| AAGTTGTGTGAGTGTCTGTA+AGG | - | chr4.4:35691932-35691951 | MS.gene057696:intron | 40.0% | |
| AATTCAGGACCTGATTCCAA+CGG | - | chr4.4:35694550-35694569 | MS.gene057696:intron | 40.0% | |
| ACCGTATTTGCAATTGAAGG+GGG | - | chr4.4:35694822-35694841 | MS.gene057696:intron | 40.0% | |
| AGAAGAGAGAGCAGTAGTTT+AGG | - | chr4.4:35692886-35692905 | MS.gene057696:intron | 40.0% | |
| AGGAAATGCCCATAATAAGC+TGG | + | chr4.4:35693053-35693072 | None:intergenic | 40.0% | |
| AGTCATTGTGGATCTGATCT+GGG | - | chr4.4:35691745-35691764 | MS.gene057696:CDS | 40.0% | |
| ATGCAATAACTTCTGCAGGT+AGG | - | chr4.4:35693724-35693743 | MS.gene057696:intron | 40.0% | |
| ATTAGTGCATGGACCAAATG+GGG | + | chr4.4:35694161-35694180 | None:intergenic | 40.0% | |
| CAACCTTGCCAAAAACAACA+TGG | + | chr4.4:35694788-35694807 | None:intergenic | 40.0% | |
| CAAGTGGTACCAAAAACTGT+GGG | - | chr4.4:35693768-35693787 | MS.gene057696:intron | 40.0% | |
| CAGGCGCATACAAAATATAG+TGG | + | chr4.4:35693277-35693296 | None:intergenic | 40.0% | |
| CCAGATACTATCCGATGAAA+TGG | + | chr4.4:35694257-35694276 | None:intergenic | 40.0% | |
| CCATTTCATCGGATAGTATC+TGG | - | chr4.4:35694254-35694273 | MS.gene057696:intron | 40.0% | |
| CGCATTCTCTGCTTCTAAAT+TGG | - | chr4.4:35691689-35691708 | MS.gene057696:CDS | 40.0% | |
| CGTAAAAACATTGTAGTCCC+TGG | - | chr4.4:35692929-35692948 | MS.gene057696:intron | 40.0% | |
| GAACACTCCTAATTAGTGCA+TGG | + | chr4.4:35694172-35694191 | None:intergenic | 40.0% | |
| GAAGAGAGAGCAGTAGTTTA+GGG | - | chr4.4:35692887-35692906 | MS.gene057696:intron | 40.0% | |
| GAGTGTTCCATATTGTGTAG+GGG | - | chr4.4:35694184-35694203 | MS.gene057696:intron | 40.0% | |
| GATTGGATTATATGGCCAAG+TGG | - | chr4.4:35693752-35693771 | MS.gene057696:intron | 40.0% | |
| GGAGATATTGTTCATCGTGA+TGG | - | chr4.4:35694293-35694312 | MS.gene057696:intron | 40.0% | |
| GGCGCATACAAAATATAGTG+GGG | + | chr4.4:35693275-35693294 | None:intergenic | 40.0% | |
| GTTGTCTCTATGGCTAATTC+AGG | - | chr4.4:35694535-35694554 | MS.gene057696:intron | 40.0% | |
| TAGAAGGATGTGGCATCAAA+CGG | - | chr4.4:35692748-35692767 | MS.gene057696:intron | 40.0% | |
| TCCCCCTTCAATTGCAAATA+CGG | + | chr4.4:35694826-35694845 | None:intergenic | 40.0% | |
| TCTCTCAGCTTTCTCATCAA+CGG | - | chr4.4:35693952-35693971 | MS.gene057696:intron | 40.0% | |
| TCTGCCTACATCATCAGAAA+AGG | + | chr4.4:35693455-35693474 | None:intergenic | 40.0% | |
| TTATCATTTACTCGAGCTCC+TGG | + | chr4.4:35692152-35692171 | None:intergenic | 40.0% | |
| TTCTTAGTTCCCCCAACTTA+GGG | + | chr4.4:35692422-35692441 | None:intergenic | 40.0% | |
| TTTCTTAGTTCCCCCAACTT+AGG | + | chr4.4:35692423-35692442 | None:intergenic | 40.0% | |
| ! | AAAATTGGTGCTCTTAACGC+AGG | + | chr4.4:35693296-35693315 | None:intergenic | 40.0% |
| ! | ACATAATCTCCCTAAGTTGG+GGG | - | chr4.4:35692410-35692429 | MS.gene057696:intron | 40.0% |
| ! | AGAAGTGTATGGCTAGTAGA+AGG | - | chr4.4:35692732-35692751 | MS.gene057696:intron | 40.0% |
| ! | ATGTGGCAATGTCCTTTTCT+TGG | + | chr4.4:35692200-35692219 | None:intergenic | 40.0% |
| ! | CTGGTGTGTAACAATTTGCT+TGG | - | chr4.4:35694384-35694403 | MS.gene057696:intron | 40.0% |
| ! | GCTCGAGTAAATGATAATGC+AGG | - | chr4.4:35692155-35692174 | MS.gene057696:intron | 40.0% |
| ! | GGAGTGTTCCATATTGTGTA+GGG | - | chr4.4:35694183-35694202 | MS.gene057696:intron | 40.0% |
| ! | GGGGTATCTATACTTTAGGA+CGG | - | chr4.4:35692312-35692331 | MS.gene057696:CDS | 40.0% |
| !! | ACTTGCTTCTTTTGTTGTGG+TGG | - | chr4.4:35693174-35693193 | MS.gene057696:intron | 40.0% |
| !! | AGGAGTGTTCCATATTGTGT+AGG | - | chr4.4:35694182-35694201 | MS.gene057696:intron | 40.0% |
| !! | ATCTATACTTTAGGACGGGA+GGG | - | chr4.4:35692317-35692336 | MS.gene057696:CDS | 40.0% |
| !! | GGGTATCTATACTTTAGGAC+GGG | - | chr4.4:35692313-35692332 | MS.gene057696:CDS | 40.0% |
| !! | TATCTATACTTTAGGACGGG+AGG | - | chr4.4:35692316-35692335 | MS.gene057696:CDS | 40.0% |
| !! | TCACAAAACCTCTAAGATGC+AGG | + | chr4.4:35693073-35693092 | None:intergenic | 40.0% |
| !!! | AGACCATGTTGTTTTTGGCA+AGG | - | chr4.4:35694782-35694801 | MS.gene057696:intron | 40.0% |
| !!! | GATGGAGACCATGTTGTTTT+TGG | - | chr4.4:35694777-35694796 | MS.gene057696:intron | 40.0% |
| !!! | GTTTTTGGCAAGGTTGTTCA+AGG | - | chr4.4:35694792-35694811 | MS.gene057696:intron | 40.0% |
| AAACAGAGCCTTCGGTTTCA+AGG | - | chr4.4:35692624-35692643 | MS.gene057696:intron | 45.0% | |
| AACTGTGAACCGTTGGAATC+AGG | + | chr4.4:35694562-35694581 | None:intergenic | 45.0% | |
| ACAACGGTGAAGTGTAAACC+AGG | - | chr4.4:35692131-35692150 | MS.gene057696:intron | 45.0% | |
| AGAGAACAAGGAGGAGAATG+AGG | + | chr4.4:35691653-35691672 | None:intergenic | 45.0% | |
| AGAGATACCGAAGAGCAAGT+GGG | - | chr4.4:35694899-35694918 | MS.gene057696:CDS | 45.0% | |
| CAGTCATTGTGGATCTGATC+TGG | - | chr4.4:35691744-35691763 | MS.gene057696:CDS | 45.0% | |
| CCAAGTGGTACCAAAAACTG+TGG | - | chr4.4:35693767-35693786 | MS.gene057696:intron | 45.0% | |
| CCATATTGTGTAGGGGAGAA+AGG | - | chr4.4:35694191-35694210 | MS.gene057696:intron | 45.0% | |
| CCTGAAATTCTCGTCTGGAA+AGG | + | chr4.4:35694348-35694367 | None:intergenic | 45.0% | |
| CCTTTCCAGACGAGAATTTC+AGG | - | chr4.4:35694345-35694364 | MS.gene057696:intron | 45.0% | |
| CCTTTCTCCCCTACACAATA+TGG | + | chr4.4:35694194-35694213 | None:intergenic | 45.0% | |
| CGGTATGCAATAACTTCTGC+AGG | - | chr4.4:35693720-35693739 | MS.gene057696:intron | 45.0% | |
| GAGGAAGAAGGTAGTGATTG+CGG | - | chr4.4:35694869-35694888 | MS.gene057696:CDS | 45.0% | |
| GATTGAGTTAGTGGAAGGGA+TGG | - | chr4.4:35692352-35692371 | MS.gene057696:intron | 45.0% | |
| GCAATCACTACCTTCTTCCT+CGG | + | chr4.4:35694870-35694889 | None:intergenic | 45.0% | |
| GCATCCGAATCTATTTACGG+TGG | - | chr4.4:35694320-35694339 | MS.gene057696:intron | 45.0% | |
| GGCAGATGAGAAAACAGAAG+AGG | - | chr4.4:35693469-35693488 | MS.gene057696:intron | 45.0% | |
| GTATGGCTAGTAGAAGGATG+TGG | - | chr4.4:35692738-35692757 | MS.gene057696:intron | 45.0% | |
| TGAAACCGAAGGCTCTGTTT+GGG | + | chr4.4:35692624-35692643 | None:intergenic | 45.0% | |
| TGACTGATAGCCTGTCATGT+AGG | - | chr4.4:35694677-35694696 | MS.gene057696:intron | 45.0% | |
| TTAGTGCATGGACCAAATGG+GGG | + | chr4.4:35694160-35694179 | None:intergenic | 45.0% | |
| TTGAAACCGAAGGCTCTGTT+TGG | + | chr4.4:35692625-35692644 | None:intergenic | 45.0% | |
| ! | GGTGCCACCGTAAATAGATT+CGG | + | chr4.4:35694327-35694346 | None:intergenic | 45.0% |
| ! | TAAGTTGGACCCCTTCACTT+GGG | - | chr4.4:35691984-35692003 | MS.gene057696:CDS | 45.0% |
| ! | TGGCAATGTCCTTTTCTTGG+AGG | + | chr4.4:35692197-35692216 | None:intergenic | 45.0% |
| !! | TTAAGTTGGACCCCTTCACT+TGG | - | chr4.4:35691983-35692002 | MS.gene057696:CDS | 45.0% |
| !! | TTGGAGGAATTTTCAGGGCA+TGG | + | chr4.4:35692181-35692200 | None:intergenic | 45.0% |
| !!! | CCACAGTTTTTGGTACCACT+TGG | + | chr4.4:35693770-35693789 | None:intergenic | 45.0% |
| !!! | TCTGGTTTTGTGATTCAGGG+TGG | - | chr4.4:35694272-35694291 | MS.gene057696:intron | 45.0% |
| AAGGTAGTGATTGCGGACTC+TGG | - | chr4.4:35694876-35694895 | MS.gene057696:CDS | 50.0% | |
| AGGAGGAGAATGAGGAATCG+AGG | + | chr4.4:35691645-35691664 | None:intergenic | 50.0% | |
| CTTCCTCGGTTTCCCACTAT+AGG | + | chr4.4:35694856-35694875 | None:intergenic | 50.0% | |
| CTTGCTTGCCTTGAAACCGA+AGG | + | chr4.4:35692635-35692654 | None:intergenic | 50.0% | |
| GAGAGATACCGAAGAGCAAG+TGG | - | chr4.4:35694898-35694917 | MS.gene057696:CDS | 50.0% | |
| GAGTTAGTGGAAGGGATGGA+GGG | - | chr4.4:35692356-35692375 | MS.gene057696:intron | 50.0% | |
| GGGCATTTCCTGCATCTTAG+AGG | - | chr4.4:35693062-35693081 | MS.gene057696:intron | 50.0% | |
| TAGTGCATGGACCAAATGGG+GGG | + | chr4.4:35694159-35694178 | None:intergenic | 50.0% | |
| TAGTGGGAAACCGAGGAAGA+AGG | - | chr4.4:35694857-35694876 | MS.gene057696:CDS | 50.0% | |
| TCTGCAGGTAGGATCGTGAT+TGG | - | chr4.4:35693735-35693754 | MS.gene057696:intron | 50.0% | |
| TGAGTTAGTGGAAGGGATGG+AGG | - | chr4.4:35692355-35692374 | MS.gene057696:intron | 50.0% | |
| TGGCAAGGTTGTTCAAGGCA+TGG | - | chr4.4:35694797-35694816 | MS.gene057696:intron | 50.0% | |
| TTACCACAGTGAAGGCCAGT+TGG | - | chr4.4:35694587-35694606 | MS.gene057696:intron | 50.0% | |
| TTTGCAATTGAAGGGGGAGC+TGG | - | chr4.4:35694828-35694847 | MS.gene057696:intron | 50.0% | |
| ! | GAACCTATAGTGGGAAACCG+AGG | - | chr4.4:35694850-35694869 | MS.gene057696:CDS | 50.0% |
| ! | GACGGGAGGGCTTTGTAAAA+AGG | - | chr4.4:35692330-35692349 | MS.gene057696:intron | 50.0% |
| ! | GATTGCAGGCGTTGTCTCTA+TGG | - | chr4.4:35694525-35694544 | MS.gene057696:intron | 50.0% |
| !! | TTACCAACTGGCCTTCACTG+TGG | + | chr4.4:35694593-35694612 | None:intergenic | 50.0% |
| AACTCACACACGCAACTGCG+AGG | + | chr4.4:35692011-35692030 | None:intergenic | 55.0% | |
| AACTGCGAGGACCCAAGTGA+AGG | + | chr4.4:35691998-35692017 | None:intergenic | 55.0% | |
| ACCGAAGGCTCTGTTTGGGA+CGG | + | chr4.4:35692620-35692639 | None:intergenic | 55.0% | |
| ACGGAAGGCGAGGGAAAGAA+AGG | + | chr4.4:35692601-35692620 | None:intergenic | 55.0% | |
| ACTGCGAGGACCCAAGTGAA+GGG | + | chr4.4:35691997-35692016 | None:intergenic | 55.0% | |
| CTTGCAGAAATGCTCGCCCA+GGG | + | chr4.4:35692949-35692968 | None:intergenic | 55.0% | |
| GGGGAGCTGGAACCTATAGT+GGG | - | chr4.4:35694841-35694860 | MS.gene057696:CDS | 55.0% | |
| TCCGTCCCAAACAGAGCCTT+CGG | - | chr4.4:35692616-35692635 | MS.gene057696:intron | 55.0% | |
| TCCTCGTCCCACTTGCTCTT+CGG | + | chr4.4:35694909-35694928 | None:intergenic | 55.0% | |
| TCTTGCAGAAATGCTCGCCC+AGG | + | chr4.4:35692950-35692969 | None:intergenic | 55.0% | |
| TGGAAGGGATGGAGGGCTAT+GGG | - | chr4.4:35692363-35692382 | MS.gene057696:intron | 55.0% | |
| ! | AAGGCTCTGTTTGGGACGGA+AGG | + | chr4.4:35692616-35692635 | None:intergenic | 55.0% |
| ! | GAGAAAGGCGAGAGTGCAAG+TGG | - | chr4.4:35694206-35694225 | MS.gene057696:intron | 55.0% |
| ACCGAAGAGCAAGTGGGACG+AGG | - | chr4.4:35694905-35694924 | MS.gene057696:CDS | 60.0% | |
| CTGCGAGGACCCAAGTGAAG+GGG | + | chr4.4:35691996-35692015 | None:intergenic | 60.0% | |
| GGAAGGGATGGAGGGCTATG+GGG | - | chr4.4:35692364-35692383 | MS.gene057696:intron | 60.0% | |
| GGGGGAGCTGGAACCTATAG+TGG | - | chr4.4:35694840-35694859 | MS.gene057696:CDS | 60.0% | |
| GTGGAAGGGATGGAGGGCTA+TGG | - | chr4.4:35692362-35692381 | MS.gene057696:intron | 60.0% | |
| ! | CTGTTTGGGACGGAAGGCGA+GGG | + | chr4.4:35692610-35692629 | None:intergenic | 60.0% |
| ! | TCTGTTTGGGACGGAAGGCG+AGG | + | chr4.4:35692611-35692630 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 35691612 | 35694935 | 35691612 | ID=MS.gene057696 |
| chr4.4 | mRNA | 35691612 | 35694935 | 35691612 | ID=MS.gene057696.t1;Parent=MS.gene057696 |
| chr4.4 | exon | 35694837 | 35694935 | 35694837 | ID=MS.gene057696.t1.exon1;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35694837 | 35694935 | 35694837 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35692999 | 35693077 | 35692999 | ID=MS.gene057696.t1.exon2;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35692999 | 35693077 | 35692999 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35692758 | 35692805 | 35692758 | ID=MS.gene057696.t1.exon3;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35692758 | 35692805 | 35692758 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35692453 | 35692476 | 35692453 | ID=MS.gene057696.t1.exon4;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35692453 | 35692476 | 35692453 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35692161 | 35692343 | 35692161 | ID=MS.gene057696.t1.exon5;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35692161 | 35692343 | 35692161 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35691939 | 35692014 | 35691939 | ID=MS.gene057696.t1.exon6;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35691939 | 35692014 | 35691939 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| chr4.4 | exon | 35691612 | 35691774 | 35691612 | ID=MS.gene057696.t1.exon7;Parent=MS.gene057696.t1 |
| chr4.4 | CDS | 35691612 | 35691774 | 35691612 | ID=cds.MS.gene057696.t1;Parent=MS.gene057696.t1 |
| Gene Sequence |
| Protein sequence |
