Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05840.t1 | XP_003593906.1 | 96.4 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 4.90E-245 | 856.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05840.t1 | Q9M209 | 60.0 | 452 | 158 | 5 | 1 | 443 | 1 | 438 | 2.9e-145 | 516.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05840.t1 | G7IP72 | 96.4 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 3.5e-245 | 856.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05840 | MS.gene46475 | PPI |
| MS.gene050621 | MS.gene05840 | PPI |
| MS.gene87461 | MS.gene05840 | PPI |
| MS.gene05840 | MS.gene034607 | PPI |
| MS.gene025936 | MS.gene05840 | PPI |
| MS.gene22822 | MS.gene05840 | PPI |
| MS.gene05840 | MS.gene76412 | PPI |
| MS.gene05840 | MS.gene39195 | PPI |
| MS.gene012007 | MS.gene05840 | PPI |
| MS.gene024471 | MS.gene05840 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05840.t1 | MTR_2g019210 | 96.437 | 449 | 16 | 0 | 1 | 449 | 1 | 449 | 0.0 | 899 |
| MS.gene05840.t1 | MTR_2g019210 | 97.253 | 364 | 10 | 0 | 1 | 364 | 1 | 364 | 0.0 | 739 |
| MS.gene05840.t1 | MTR_1g063090 | 90.476 | 294 | 28 | 0 | 1 | 294 | 1 | 294 | 0.0 | 566 |
| MS.gene05840.t1 | MTR_8g077430 | 29.368 | 269 | 168 | 7 | 11 | 264 | 4 | 265 | 1.19e-26 | 108 |
| MS.gene05840.t1 | MTR_1g031820 | 29.963 | 267 | 169 | 6 | 11 | 264 | 401 | 662 | 3.24e-26 | 112 |
| MS.gene05840.t1 | MTR_1g007060 | 25.899 | 278 | 187 | 6 | 17 | 278 | 28 | 302 | 2.37e-21 | 94.4 |
| MS.gene05840.t1 | MTR_1g007060 | 26.749 | 243 | 163 | 4 | 17 | 247 | 28 | 267 | 1.81e-20 | 91.7 |
| MS.gene05840.t1 | MTR_8g077430 | 27.228 | 202 | 128 | 6 | 75 | 264 | 2 | 196 | 7.52e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05840.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene05840.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene05840.t1 | AT3G60500 | 60.000 | 445 | 149 | 6 | 1 | 433 | 1 | 428 | 0.0 | 513 |
| MS.gene05840.t1 | AT3G60500 | 63.708 | 383 | 118 | 5 | 1 | 377 | 1 | 368 | 3.25e-170 | 483 |
| MS.gene05840.t1 | AT3G12990 | 71.192 | 302 | 87 | 0 | 1 | 302 | 1 | 302 | 8.41e-160 | 454 |
| MS.gene05840.t1 | AT3G12990 | 71.192 | 302 | 87 | 0 | 1 | 302 | 1 | 302 | 8.41e-160 | 454 |
| MS.gene05840.t1 | AT3G12990 | 72.887 | 284 | 77 | 0 | 1 | 284 | 1 | 284 | 4.05e-152 | 433 |
| MS.gene05840.t1 | AT3G12990 | 75.701 | 214 | 52 | 0 | 1 | 214 | 1 | 214 | 1.66e-117 | 343 |
| MS.gene05840.t1 | AT3G07750 | 29.740 | 269 | 167 | 7 | 11 | 264 | 3 | 264 | 3.04e-27 | 110 |
| MS.gene05840.t1 | AT3G07750 | 29.740 | 269 | 167 | 7 | 11 | 264 | 3 | 264 | 3.04e-27 | 110 |
| MS.gene05840.t1 | AT1G60080 | 27.881 | 269 | 176 | 5 | 17 | 269 | 26 | 292 | 3.03e-23 | 99.8 |
Find 114 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGTTGAACATTAAATT+TGG | 0.095631 | 2.3:-67496924 | MS.gene05840:CDS |
| CATAACTTAATTCCCATTAT+TGG | 0.197437 | 2.3:+67493408 | None:intergenic |
| TTCTTTCTGCCAAACTTGTC+TGG | 0.208475 | 2.3:-67496653 | MS.gene05840:CDS |
| ATTTCCTGCGCTGGTTCTTC+TGG | 0.247600 | 2.3:+67493544 | None:intergenic |
| CTTCCAGTTGCAGTCACCTT+TGG | 0.284591 | 2.3:-67496247 | MS.gene05840:CDS |
| CATTATAGACCGCGGTTTAC+GGG | 0.295153 | 2.3:-67496709 | MS.gene05840:CDS |
| TCCTTTGAGCCTGGCCATCC+TGG | 0.308879 | 2.3:-67496756 | MS.gene05840:CDS |
| GAAAGGCGAGACAAATTTAA+TGG | 0.327208 | 2.3:-67495280 | MS.gene05840:CDS |
| GCATTATAGACCGCGGTTTA+CGG | 0.332870 | 2.3:-67496710 | MS.gene05840:CDS |
| AATCCAAAGGTGACTGCAAC+TGG | 0.344185 | 2.3:+67496244 | None:intergenic |
| GAATGTGATGCCACATCATT+AGG | 0.345051 | 2.3:-67495258 | MS.gene05840:CDS |
| GGAGAATCTGCCGTTGAGTT+AGG | 0.366917 | 2.3:-67496735 | MS.gene05840:CDS |
| GCAAGTTGAACATTAAATTT+GGG | 0.368287 | 2.3:-67496923 | MS.gene05840:CDS |
| ATTAAATTTGGGAGGGATGA+TGG | 0.374567 | 2.3:-67496912 | MS.gene05840:CDS |
| AGTGGATGGTCGGGGCCCCT+TGG | 0.390912 | 2.3:-67496952 | MS.gene05840:CDS |
| TGTGGAACCACTGCCACGTT+AGG | 0.394002 | 2.3:-67495363 | MS.gene05840:CDS |
| AGAAGGCCTGAATGCTCGTT+GGG | 0.394350 | 2.3:-67496434 | MS.gene05840:CDS |
| TCTCGCCTTTCAGCTTCAAC+TGG | 0.394391 | 2.3:+67495292 | None:intergenic |
| TCATTAGGCCTATCTTTGTA+AGG | 0.401300 | 2.3:+67496825 | None:intergenic |
| ATAGATAGTGTACCTTCATT+AGG | 0.408385 | 2.3:+67496810 | None:intergenic |
| ACTCACTGCATCATTTATCT+TGG | 0.411650 | 2.3:+67495890 | None:intergenic |
| GCGAATGGCCCAGACAAGTT+TGG | 0.413491 | 2.3:+67496644 | None:intergenic |
| TCTTTCTGCCAAACTTGTCT+GGG | 0.424579 | 2.3:-67496652 | MS.gene05840:CDS |
| CAGTCATTACAGCCTCTTCA+TGG | 0.425419 | 2.3:+67496045 | None:intergenic |
| TTGTGCAGCCTTACAAAGAT+AGG | 0.432049 | 2.3:-67496833 | MS.gene05840:CDS |
| GCTGATCCTTCCTTTGAGCC+TGG | 0.434825 | 2.3:-67496765 | MS.gene05840:CDS |
| ATTGACACTGCTCTAACTGC+TGG | 0.450510 | 2.3:-67493502 | MS.gene05840:CDS |
| TGACACGTGTCTCGCCCAAT+TGG | 0.455639 | 2.3:+67496877 | None:intergenic |
| AGCAGAGATTAGCTAATTGT+TGG | 0.456222 | 2.3:-67497031 | MS.gene05840:CDS |
| GCAGTTAGAGCAGTGTCAAT+TGG | 0.458988 | 2.3:+67493505 | None:intergenic |
| AGAGCTTCGAGTGGATGGTC+GGG | 0.470323 | 2.3:-67496961 | MS.gene05840:CDS |
| ATCAACTCCTAGTAAACAAA+AGG | 0.472420 | 2.3:-67493587 | MS.gene05840:CDS |
| TGGGTCTGCCGAGATCCAAT+TGG | 0.473726 | 2.3:-67496892 | MS.gene05840:CDS |
| GTGGAACCACTGCCACGTTA+GGG | 0.484142 | 2.3:-67495362 | MS.gene05840:CDS |
| AACTCAACGGCAGATTCTCC+AGG | 0.490630 | 2.3:+67496738 | None:intergenic |
| TGCTGCAAATATTGCTGCAT+TGG | 0.500659 | 2.3:-67496474 | MS.gene05840:CDS |
| CATGAAGAGGCTGTAATGAC+TGG | 0.506831 | 2.3:-67496044 | MS.gene05840:CDS |
| GGGTCTGCCGAGATCCAATT+GGG | 0.507284 | 2.3:-67496891 | MS.gene05840:CDS |
| TTAAATTTGGGAGGGATGAT+GGG | 0.508701 | 2.3:-67496911 | MS.gene05840:CDS |
| GGAAGATGATGTATAATCAA+AGG | 0.510424 | 2.3:+67496265 | None:intergenic |
| TCCAGGATGGCCAGGCTCAA+AGG | 0.511535 | 2.3:+67496755 | None:intergenic |
| TTGAAAAGCACAACAATGAA+AGG | 0.511669 | 2.3:-67495434 | MS.gene05840:CDS |
| AGAGATTAGCTAATTGTTGG+CGG | 0.512799 | 2.3:-67497028 | MS.gene05840:CDS |
| GTGTGTGCAATTCAAAAGCC+TGG | 0.513608 | 2.3:-67495987 | MS.gene05840:CDS |
| CAGAGCTTCGAGTGGATGGT+CGG | 0.514274 | 2.3:-67496962 | MS.gene05840:CDS |
| GAAGATGATGTATAATCAAA+GGG | 0.519406 | 2.3:+67496266 | None:intergenic |
| ACGACATTCTTCCTCTGTTG+CGG | 0.519551 | 2.3:-67495394 | MS.gene05840:CDS |
| GCAGATTCTCCAGGATGGCC+AGG | 0.520556 | 2.3:+67496747 | None:intergenic |
| ACTGTCTTGATTTCCTGCGC+TGG | 0.521832 | 2.3:+67493535 | None:intergenic |
| CTATCAGAGCTTCGAGTGGA+TGG | 0.523011 | 2.3:-67496966 | MS.gene05840:CDS |
| AAACTTGCTCATGTTAAAGC+TGG | 0.525982 | 2.3:-67495924 | MS.gene05840:CDS |
| GCAGAGCGATTCAGTGTCAA+TGG | 0.527593 | 2.3:+67496677 | None:intergenic |
| TGAATTGACACAATCTGAGT+AGG | 0.528375 | 2.3:+67494893 | None:intergenic |
| CTGACACCTTACCAGCTTGA+GGG | 0.534896 | 2.3:+67495183 | None:intergenic |
| ACTGCAACACTTAATGCAAA+TGG | 0.537645 | 2.3:-67496014 | MS.gene05840:CDS |
| CTTCACTGAATTCTCTCCCA+TGG | 0.539169 | 2.3:-67496787 | MS.gene05840:CDS |
| ACATTCTTCCTCTGTTGCGG+TGG | 0.540050 | 2.3:-67495391 | MS.gene05840:CDS |
| GTTCAACTTGCGATAGTCCA+AGG | 0.542934 | 2.3:+67496935 | None:intergenic |
| TGGAACCACTGCCACGTTAG+GGG | 0.547405 | 2.3:-67495361 | MS.gene05840:CDS |
| TAAACAAAAGGATTCAAGAC+AGG | 0.550828 | 2.3:-67493575 | MS.gene05840:CDS |
| GAGCTTCGAGTGGATGGTCG+GGG | 0.552607 | 2.3:-67496960 | MS.gene05840:CDS |
| CAGAAGGCCTGAATGCTCGT+TGG | 0.553951 | 2.3:-67496435 | MS.gene05840:CDS |
| TTTCAGCAATGAAAATCTTG+TGG | 0.555730 | 2.3:-67496221 | MS.gene05840:intron |
| TCTGTTGCGGTGGATGTATG+TGG | 0.557391 | 2.3:-67495381 | MS.gene05840:CDS |
| TTATCGGTGGCCCCTCAAGC+TGG | 0.557741 | 2.3:-67495194 | MS.gene05840:intron |
| TGAAAAGCACAACAATGAAA+GGG | 0.559466 | 2.3:-67495433 | MS.gene05840:CDS |
| ACTGCTGGGCAGAGTAATGA+AGG | 0.560209 | 2.3:-67493487 | MS.gene05840:CDS |
| GTTGAACATTAAATTTGGGA+GGG | 0.560586 | 2.3:-67496919 | MS.gene05840:CDS |
| CAATCAGATGGTGATAAAGA+AGG | 0.565707 | 2.3:-67495327 | MS.gene05840:CDS |
| TACAAAGATAGGCCTAATGA+AGG | 0.565777 | 2.3:-67496822 | MS.gene05840:CDS |
| ACCCTGCATTGTCTAGTATG+TGG | 0.565903 | 2.3:+67496613 | None:intergenic |
| CTAGACCAGTTGAAGCTGAA+AGG | 0.569023 | 2.3:-67495297 | MS.gene05840:CDS |
| TGTGTGCAATTCAAAAGCCT+GGG | 0.572264 | 2.3:-67495986 | MS.gene05840:CDS |
| AGTTGAACATTAAATTTGGG+AGG | 0.574931 | 2.3:-67496920 | MS.gene05840:CDS |
| TTCAACTTGCGATAGTCCAA+GGG | 0.575404 | 2.3:+67496936 | None:intergenic |
| CTCAAAGGAAGGATCAGCCA+TGG | 0.576940 | 2.3:+67496770 | None:intergenic |
| TAAGCCAGAAGAACCAGCGC+AGG | 0.581328 | 2.3:-67493548 | MS.gene05840:CDS |
| AAGGCCTGAATGCTCGTTGG+GGG | 0.582507 | 2.3:-67496432 | MS.gene05840:CDS |
| GTGCAGAGTAGCAAGAAGGA+TGG | 0.583283 | 2.3:-67495231 | MS.gene05840:CDS |
| GAATTGACACAATCTGAGTA+GGG | 0.583687 | 2.3:+67494894 | None:intergenic |
| GGAAAACAAAATCAATCAGA+TGG | 0.587328 | 2.3:-67495339 | MS.gene05840:CDS |
| ACTGACACCTTACCAGCTTG+AGG | 0.591782 | 2.3:+67495182 | None:intergenic |
| TGTCTCGCCCAATTGGATCT+CGG | 0.592757 | 2.3:+67496884 | None:intergenic |
| TGATGTATAATCAAAGGGAG+TGG | 0.594545 | 2.3:+67496271 | None:intergenic |
| GGAACCACTGCCACGTTAGG+GGG | 0.597428 | 2.3:-67495360 | MS.gene05840:CDS |
| GGATGGCCAGGCTCAAAGGA+AGG | 0.597532 | 2.3:+67496759 | None:intergenic |
| CTGAGGAAGCTGACCTCAGG+AGG | 0.600233 | 2.3:+67496380 | None:intergenic |
| TTGACACTGCTCTAACTGCT+GGG | 0.600516 | 2.3:-67493501 | MS.gene05840:CDS |
| CTGTCAAGCCCAAGAACAAG+CGG | 0.602139 | 2.3:-67493447 | MS.gene05840:CDS |
| TGACACCTTACCAGCTTGAG+GGG | 0.602551 | 2.3:+67495184 | None:intergenic |
| TAATGAAGGTAAGACTCTGA+AGG | 0.603765 | 2.3:-67493473 | MS.gene05840:CDS |
| GAAGGCCTGAATGCTCGTTG+GGG | 0.609514 | 2.3:-67496433 | MS.gene05840:CDS |
| ATCCACATACTAGACAATGC+AGG | 0.610994 | 2.3:-67496615 | MS.gene05840:CDS |
| ACAAGTGCAGAGTAGCAAGA+AGG | 0.616848 | 2.3:-67495235 | MS.gene05840:CDS |
| CATCTCTGAAGACATTCAGA+AGG | 0.617687 | 2.3:-67496451 | MS.gene05840:CDS |
| ACAGCCTCTTCATGGTATGT+CGG | 0.618076 | 2.3:+67496053 | None:intergenic |
| CTGCACTTGTCCTAATGATG+TGG | 0.618547 | 2.3:+67495248 | None:intergenic |
| TCAAAGGAAGGATCAGCCAT+GGG | 0.631822 | 2.3:+67496771 | None:intergenic |
| AGGCCTGAATGCTCGTTGGG+GGG | 0.639267 | 2.3:-67496431 | MS.gene05840:CDS |
| TCCACATACTAGACAATGCA+GGG | 0.639330 | 2.3:-67496614 | MS.gene05840:intron |
| AGTTGTAGTGCATCCTCCTG+AGG | 0.641826 | 2.3:-67496393 | MS.gene05840:intron |
| AAAGCTTCTCTAGCTTCTCG+TGG | 0.641908 | 2.3:-67494861 | MS.gene05840:intron |
| TATAATGCGTCCTAACTCAA+CGG | 0.642138 | 2.3:+67496725 | None:intergenic |
| CAACGGCAGATTCTCCAGGA+TGG | 0.646304 | 2.3:+67496742 | None:intergenic |
| GGATCCGACATACCATGAAG+AGG | 0.653779 | 2.3:-67496057 | MS.gene05840:CDS |
| CTCTACTTTCCCGTAAACCG+CGG | 0.664238 | 2.3:+67496700 | None:intergenic |
| TCTTCTATCAGAGCTTCGAG+TGG | 0.667601 | 2.3:-67496970 | MS.gene05840:CDS |
| TATGTGGATGTCAATGCGAA+TGG | 0.686074 | 2.3:+67496629 | None:intergenic |
| GTGCAATTCAAAAGCCTGGG+GGG | 0.686221 | 2.3:-67495983 | MS.gene05840:CDS |
| ACATACATCCACCGCAACAG+AGG | 0.701182 | 2.3:+67495383 | None:intergenic |
| GTGTGCAATTCAAAAGCCTG+GGG | 0.708877 | 2.3:-67495985 | MS.gene05840:CDS |
| TCAACTTGCGATAGTCCAAG+GGG | 0.732414 | 2.3:+67496937 | None:intergenic |
| TTAGGACGCATTATAGACCG+CGG | 0.761510 | 2.3:-67496717 | MS.gene05840:CDS |
| TGTGCAATTCAAAAGCCTGG+GGG | 0.776295 | 2.3:-67495984 | MS.gene05840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATTTACAG+AGG | - | chr2.3:67496361-67496380 | MS.gene05840:intron | 10.0% |
| !! | AAAAAAAAAAAATTTACAGA+GGG | - | chr2.3:67496362-67496381 | MS.gene05840:intron | 10.0% |
| !! | AAAACAAAAAAAAAATTACA+GGG | + | chr2.3:67496228-67496247 | None:intergenic | 10.0% |
| !! | TAAAAAATAATAATTTACAG+GGG | + | chr2.3:67496199-67496218 | None:intergenic | 10.0% |
| !!! | TTCATATATTTTATAATCAT+TGG | - | chr2.3:67496734-67496753 | MS.gene05840:CDS | 10.0% |
| !! | AAAAAAAAAAATTTACAGAG+GGG | - | chr2.3:67496363-67496382 | MS.gene05840:intron | 15.0% |
| !! | AAACAAAAAAAAAATTACAG+GGG | + | chr2.3:67496227-67496246 | None:intergenic | 15.0% |
| !! | CAAAACAAAAAAAAAATTAC+AGG | + | chr2.3:67496229-67496248 | None:intergenic | 15.0% |
| !! | GTAATTTAACAAAACAATAA+GGG | - | chr2.3:67496119-67496138 | MS.gene05840:intron | 15.0% |
| !! | TTTAGATAAAATTGTTCAAT+TGG | - | chr2.3:67495761-67495780 | MS.gene05840:intron | 15.0% |
| !!! | AAAACAATTTTTTTTTACAG+GGG | - | chr2.3:67496334-67496353 | MS.gene05840:intron | 15.0% |
| !!! | CAAAACAATTTTTTTTTACA+GGG | - | chr2.3:67496333-67496352 | MS.gene05840:intron | 15.0% |
| !!! | CTGTAATTTTTTTTTTGTTT+TGG | - | chr2.3:67496227-67496246 | MS.gene05840:CDS | 15.0% |
| !! | AAAAAAACATCTTCCAATAA+TGG | - | chr2.3:67497028-67497047 | MS.gene05840:CDS | 20.0% |
| !! | AAAAAACATCTTCCAATAAT+GGG | - | chr2.3:67497029-67497048 | MS.gene05840:CDS | 20.0% |
| !! | AACAAAAAAAAAATTACAGG+GGG | + | chr2.3:67496226-67496245 | None:intergenic | 20.0% |
| !! | AGCAACATTAATTATTGTTT+GGG | + | chr2.3:67496427-67496446 | None:intergenic | 20.0% |
| !! | ATAGGATAATAAATGAGTAA+AGG | + | chr2.3:67495968-67495987 | None:intergenic | 20.0% |
| !! | ATATATACCAAAATCAAGAA+AGG | + | chr2.3:67494327-67494346 | None:intergenic | 20.0% |
| !! | ATTTCTGCAAAAAAAAAAGT+TGG | - | chr2.3:67496282-67496301 | MS.gene05840:CDS | 20.0% |
| !! | GGTAATTTAACAAAACAATA+AGG | - | chr2.3:67496118-67496137 | MS.gene05840:intron | 20.0% |
| !! | TCTTAAAATGACAACTAAAA+GGG | + | chr2.3:67495883-67495902 | None:intergenic | 20.0% |
| !!! | AAGCATGAAAATTTTCATAA+CGG | + | chr2.3:67494848-67494867 | None:intergenic | 20.0% |
| !!! | AATCAAAAGTTATTAGTTCT+TGG | + | chr2.3:67495296-67495315 | None:intergenic | 20.0% |
| !!! | ATTACTTTTATCTGTCATTT+TGG | - | chr2.3:67495468-67495487 | MS.gene05840:intron | 20.0% |
| !!! | CCAAAACAATTTTTTTTTAC+AGG | - | chr2.3:67496332-67496351 | MS.gene05840:intron | 20.0% |
| !!! | CCTGTAAAAAAAAATTGTTT+TGG | + | chr2.3:67496335-67496354 | None:intergenic | 20.0% |
| !!! | GATTTCAATTTTTGGAATTT+TGG | + | chr2.3:67495715-67495734 | None:intergenic | 20.0% |
| !!! | TTGATTTTGGTATATATATG+AGG | - | chr2.3:67494330-67494349 | MS.gene05840:intron | 20.0% |
| !!! | TTTTGATTAAGCATTTAAAC+TGG | - | chr2.3:67495658-67495677 | MS.gene05840:intron | 20.0% |
| ! | AACAAAACAATAAGGGTTAA+TGG | - | chr2.3:67496126-67496145 | MS.gene05840:intron | 25.0% |
| ! | ACTATAAATAACAGTCTTTG+AGG | + | chr2.3:67495363-67495382 | None:intergenic | 25.0% |
| ! | CAGCAACATTAATTATTGTT+TGG | + | chr2.3:67496428-67496447 | None:intergenic | 25.0% |
| ! | CTATAAATAACAGTCTTTGA+GGG | + | chr2.3:67495362-67495381 | None:intergenic | 25.0% |
| ! | GAAGATGATGTATAATCAAA+GGG | + | chr2.3:67494186-67494205 | None:intergenic | 25.0% |
| ! | GATAATATGATATGTATTGC+AGG | - | chr2.3:67494147-67494166 | MS.gene05840:intron | 25.0% |
| ! | GATTATGGAATGTATATTGT+TGG | - | chr2.3:67494960-67494979 | MS.gene05840:intron | 25.0% |
| ! | GTCTTAAAATGACAACTAAA+AGG | + | chr2.3:67495884-67495903 | None:intergenic | 25.0% |
| ! | TATGTTGAGGTAAAAATACT+TGG | - | chr2.3:67495513-67495532 | MS.gene05840:intron | 25.0% |
| ! | TCTCTGTAATAACTAACTAA+GGG | - | chr2.3:67495999-67496018 | MS.gene05840:CDS | 25.0% |
| ! | TGATAATATGGAAACCTATA+TGG | - | chr2.3:67495391-67495410 | MS.gene05840:CDS | 25.0% |
| ! | TTGGTATATATATGAGGTAA+TGG | - | chr2.3:67494336-67494355 | MS.gene05840:intron | 25.0% |
| !! | ACTGCAATGATTTCAATTTT+TGG | + | chr2.3:67495723-67495742 | None:intergenic | 25.0% |
| !! | AGACTGTTATTTATAGTCAA+TGG | - | chr2.3:67495366-67495385 | MS.gene05840:CDS | 25.0% |
| !! | ATTTTTGAATGACCTATTAG+GGG | + | chr2.3:67496258-67496277 | None:intergenic | 25.0% |
| !! | CATTTTTGAATGACCTATTA+GGG | + | chr2.3:67496259-67496278 | None:intergenic | 25.0% |
| !! | GATTTGTTTATCTACAACTA+AGG | - | chr2.3:67493908-67493927 | MS.gene05840:intron | 25.0% |
| !! | GCAAGTTGAACATTAAATTT+GGG | - | chr2.3:67493526-67493545 | MS.gene05840:CDS | 25.0% |
| !! | TTTTTATGCGTAAAGATTTG+AGG | - | chr2.3:67494587-67494606 | MS.gene05840:intron | 25.0% |
| !!! | AATTTCTTTTGTTGTCTGAA+TGG | - | chr2.3:67494985-67495004 | MS.gene05840:intron | 25.0% |
| !!! | CTAACTAAGGGTAATTTTTT+TGG | - | chr2.3:67496011-67496030 | MS.gene05840:CDS | 25.0% |
| !!! | TAAATGAGTAAAGGTACTAT+AGG | + | chr2.3:67495959-67495978 | None:intergenic | 25.0% |
| !!! | TAGTCAATGGATTGATAATA+TGG | - | chr2.3:67495379-67495398 | MS.gene05840:CDS | 25.0% |
| !!! | TCATTTTTGAATGACCTATT+AGG | + | chr2.3:67496260-67496279 | None:intergenic | 25.0% |
| AAATGACAACTAAAAGGGAA+CGG | + | chr2.3:67495878-67495897 | None:intergenic | 30.0% | |
| AACATAGACAAAACTCAGAA+TGG | + | chr2.3:67495499-67495518 | None:intergenic | 30.0% | |
| AGATAAACAAATCAGCAAGT+TGG | + | chr2.3:67493901-67493920 | None:intergenic | 30.0% | |
| AGTCAATGACCTACTATTAT+AGG | + | chr2.3:67496164-67496183 | None:intergenic | 30.0% | |
| AGTTGAACATTAAATTTGGG+AGG | - | chr2.3:67493529-67493548 | MS.gene05840:CDS | 30.0% | |
| ATAGATAGTGTACCTTCATT+AGG | + | chr2.3:67493642-67493661 | None:intergenic | 30.0% | |
| ATCAACTCCTAGTAAACAAA+AGG | - | chr2.3:67496862-67496881 | MS.gene05840:CDS | 30.0% | |
| ATTGCATTATCAATTGCGTA+TGG | - | chr2.3:67494938-67494957 | MS.gene05840:intron | 30.0% | |
| CAAGATTATAGTGAAAGTGA+AGG | + | chr2.3:67495625-67495644 | None:intergenic | 30.0% | |
| CTCTCTGTAATAACTAACTA+AGG | - | chr2.3:67495998-67496017 | MS.gene05840:CDS | 30.0% | |
| CTTAACACCAAACACAAAAT+GGG | + | chr2.3:67494667-67494686 | None:intergenic | 30.0% | |
| CTTCACTTTCACTATAATCT+TGG | - | chr2.3:67495623-67495642 | MS.gene05840:intron | 30.0% | |
| GAATGTCTTCTAAACAGAAT+GGG | + | chr2.3:67495808-67495827 | None:intergenic | 30.0% | |
| GATAAACAAATCAGCAAGTT+GGG | + | chr2.3:67493900-67493919 | None:intergenic | 30.0% | |
| GGAAAACAAAATCAATCAGA+TGG | - | chr2.3:67495110-67495129 | MS.gene05840:intron | 30.0% | |
| GGAAGATGATGTATAATCAA+AGG | + | chr2.3:67494187-67494206 | None:intergenic | 30.0% | |
| GTCAATGACCTACTATTATA+GGG | + | chr2.3:67496163-67496182 | None:intergenic | 30.0% | |
| GTTATTACAGAGAGAATTGA+TGG | + | chr2.3:67495992-67496011 | None:intergenic | 30.0% | |
| GTTGAACATTAAATTTGGGA+GGG | - | chr2.3:67493530-67493549 | MS.gene05840:CDS | 30.0% | |
| TAAACAAAAGGATTCAAGAC+AGG | - | chr2.3:67496874-67496893 | MS.gene05840:CDS | 30.0% | |
| TAATAATTTACAGGGGAAAC+CGG | + | chr2.3:67496192-67496211 | None:intergenic | 30.0% | |
| TCAATGACCTACTATTATAG+GGG | + | chr2.3:67496162-67496181 | None:intergenic | 30.0% | |
| TGAATGTCTTCTAAACAGAA+TGG | + | chr2.3:67495809-67495828 | None:intergenic | 30.0% | |
| TGCATAATATATGCAATGTC+CGG | + | chr2.3:67496057-67496076 | None:intergenic | 30.0% | |
| TGTACTATTGTAAAATGAGC+AGG | - | chr2.3:67496836-67496855 | MS.gene05840:CDS | 30.0% | |
| TTCATTGCTGAAAAATCCAA+AGG | + | chr2.3:67494221-67494240 | None:intergenic | 30.0% | |
| TTGAAATCATTGCAGTACTA+AGG | - | chr2.3:67495727-67495746 | MS.gene05840:intron | 30.0% | |
| TTGACATGTTTATGCCATAT+AGG | + | chr2.3:67495408-67495427 | None:intergenic | 30.0% | |
| TTTATGGCTGTGAAAAGTAA+TGG | + | chr2.3:67496564-67496583 | None:intergenic | 30.0% | |
| TTTCAGCAATGAAAATCTTG+TGG | - | chr2.3:67494228-67494247 | MS.gene05840:intron | 30.0% | |
| ! | AATTTTACCCTCGGTAATAT+AGG | + | chr2.3:67496402-67496421 | None:intergenic | 30.0% |
| ! | ATACATGCCTTTCTTGATTT+TGG | - | chr2.3:67494317-67494336 | MS.gene05840:intron | 30.0% |
| ! | CGCAAGTTGAACATTAAATT+TGG | - | chr2.3:67493525-67493544 | MS.gene05840:CDS | 30.0% |
| ! | GATTTTATATGATGCTCTCT+AGG | - | chr2.3:67494365-67494384 | MS.gene05840:intron | 30.0% |
| ! | GGAAGCTCAAAGAATTTTAT+CGG | - | chr2.3:67495239-67495258 | MS.gene05840:CDS | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | - | chr2.3:67496303-67496322 | MS.gene05840:intron | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | - | chr2.3:67496304-67496323 | MS.gene05840:intron | 30.0% |
| ! | TATCAATTGCGTATGGATTA+TGG | - | chr2.3:67494945-67494964 | MS.gene05840:intron | 30.0% |
| ! | TGAAAAGCACAACAATGAAA+GGG | - | chr2.3:67495016-67495035 | MS.gene05840:intron | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | - | chr2.3:67496302-67496321 | MS.gene05840:intron | 30.0% |
| ! | TTGAAAAGCACAACAATGAA+AGG | - | chr2.3:67495015-67495034 | MS.gene05840:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | - | chr2.3:67496305-67496324 | MS.gene05840:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | + | chr2.3:67496324-67496305 | None:intergenic | 30.0% |
| !! | CTTGAATCCTTTTGTTTACT+AGG | + | chr2.3:67496872-67496891 | None:intergenic | 30.0% |
| !!! | ACTAAGGGTAATTTTTTTGG+TGG | - | chr2.3:67496014-67496033 | MS.gene05840:CDS | 30.0% |
| AAAATTTACAGAGGGGAAAC+CGG | - | chr2.3:67496370-67496389 | MS.gene05840:intron | 35.0% | |
| AATGACCTACTATTATAGGG+GGG | + | chr2.3:67496160-67496179 | None:intergenic | 35.0% | |
| ACAGAGAGAATTGATGGAAT+AGG | + | chr2.3:67495986-67496005 | None:intergenic | 35.0% | |
| ACCTGGTTCATTATTCTACA+AGG | - | chr2.3:67496589-67496608 | MS.gene05840:intron | 35.0% | |
| ACTCACTGCATCATTTATCT+TGG | + | chr2.3:67494562-67494581 | None:intergenic | 35.0% | |
| ACTGCAACACTTAATGCAAA+TGG | - | chr2.3:67494435-67494454 | MS.gene05840:intron | 35.0% | |
| ATATGATGCTCTCTAGGTAT+TGG | - | chr2.3:67494371-67494390 | MS.gene05840:intron | 35.0% | |
| ATTAAATTTGGGAGGGATGA+TGG | - | chr2.3:67493537-67493556 | MS.gene05840:CDS | 35.0% | |
| ATTTCATTTCTGCGTTTGGT+TGG | - | chr2.3:67496659-67496678 | MS.gene05840:CDS | 35.0% | |
| CAATCAGATGGTGATAAAGA+AGG | - | chr2.3:67495122-67495141 | MS.gene05840:intron | 35.0% | |
| CAATGACCTACTATTATAGG+GGG | + | chr2.3:67496161-67496180 | None:intergenic | 35.0% | |
| CATAATATATGCAATGTCCG+GGG | + | chr2.3:67496055-67496074 | None:intergenic | 35.0% | |
| CATATTATCGATAACTGCTG+CGG | + | chr2.3:67494136-67494155 | None:intergenic | 35.0% | |
| CGGAAGCTAAATAGAAAACA+GGG | + | chr2.3:67494116-67494135 | None:intergenic | 35.0% | |
| GAAAGGCGAGACAAATTTAA+TGG | - | chr2.3:67495169-67495188 | MS.gene05840:intron | 35.0% | |
| GAAATGACCTATATTACCGA+GGG | - | chr2.3:67496392-67496411 | MS.gene05840:intron | 35.0% | |
| GAATTGACACAATCTGAGTA+GGG | + | chr2.3:67495558-67495577 | None:intergenic | 35.0% | |
| GACAACGAAAAAGGAACAAA+GGG | - | chr2.3:67496509-67496528 | MS.gene05840:intron | 35.0% | |
| GCATAATATATGCAATGTCC+GGG | + | chr2.3:67496056-67496075 | None:intergenic | 35.0% | |
| GCTTAACACCAAACACAAAA+TGG | + | chr2.3:67494668-67494687 | None:intergenic | 35.0% | |
| GGAAGCTAAATAGAAAACAG+GGG | + | chr2.3:67494115-67494134 | None:intergenic | 35.0% | |
| TAATGAAGGTAAGACTCTGA+AGG | - | chr2.3:67496976-67496995 | MS.gene05840:CDS | 35.0% | |
| TACAAAGATAGGCCTAATGA+AGG | - | chr2.3:67493627-67493646 | MS.gene05840:intron | 35.0% | |
| TATAATGCGTCCTAACTCAA+CGG | + | chr2.3:67493727-67493746 | None:intergenic | 35.0% | |
| TCATTAGGCCTATCTTTGTA+AGG | + | chr2.3:67493627-67493646 | None:intergenic | 35.0% | |
| TCCTTGTAGAATAATGAACC+AGG | + | chr2.3:67496593-67496612 | None:intergenic | 35.0% | |
| TCGGTAATATAGGTCATTTC+CGG | + | chr2.3:67496392-67496411 | None:intergenic | 35.0% | |
| TCTTCTGCTTATAAGTCTTC+TGG | - | chr2.3:67494723-67494742 | MS.gene05840:intron | 35.0% | |
| TGAATTGACACAATCTGAGT+AGG | + | chr2.3:67495559-67495578 | None:intergenic | 35.0% | |
| TGATGTATAATCAAAGGGAG+TGG | + | chr2.3:67494181-67494200 | None:intergenic | 35.0% | |
| TTAAATTTGGGAGGGATGAT+GGG | - | chr2.3:67493538-67493557 | MS.gene05840:CDS | 35.0% | |
| TTCAAATGCGACAACGAAAA+AGG | - | chr2.3:67496500-67496519 | MS.gene05840:intron | 35.0% | |
| ! | AAACTTGCTCATGTTAAAGC+TGG | - | chr2.3:67494525-67494544 | MS.gene05840:intron | 35.0% |
| ! | AGAGATTAGCTAATTGTTGG+CGG | - | chr2.3:67493421-67493440 | MS.gene05840:CDS | 35.0% |
| ! | AGCAGAGATTAGCTAATTGT+TGG | - | chr2.3:67493418-67493437 | MS.gene05840:CDS | 35.0% |
| ! | AGCTCAAAGAATTTTATCGG+TGG | - | chr2.3:67495242-67495261 | MS.gene05840:CDS | 35.0% |
| ! | ATCATCTCCCATTTTGTGTT+TGG | - | chr2.3:67494657-67494676 | MS.gene05840:intron | 35.0% |
| ! | ATGAACCAGGTTGAGATTTA+TGG | + | chr2.3:67496580-67496599 | None:intergenic | 35.0% |
| ! | GTTGATTTCATTTCTGCGTT+TGG | - | chr2.3:67496655-67496674 | MS.gene05840:CDS | 35.0% |
| ! | TTTGATAGTCTAGCTGTTTC+TGG | - | chr2.3:67495335-67495354 | MS.gene05840:CDS | 35.0% |
| ! | TTTGTTGTCTGAATGGATGT+AGG | - | chr2.3:67494992-67495011 | MS.gene05840:intron | 35.0% |
| ! | TTTTTCTTCCGCTTGTTCTT+GGG | + | chr2.3:67497013-67497032 | None:intergenic | 35.0% |
| !! | GTTTGGGTTAATTTTACCCT+CGG | + | chr2.3:67496411-67496430 | None:intergenic | 35.0% |
| !! | TCTGAGTTTTGTCTATGTTG+AGG | - | chr2.3:67495500-67495519 | MS.gene05840:intron | 35.0% |
| !!! | GAGGGAGTATTGTTTTACAT+GGG | + | chr2.3:67495856-67495875 | None:intergenic | 35.0% |
| !!! | GTAATTTTTTTGGTGGTGTC+CGG | - | chr2.3:67496021-67496040 | MS.gene05840:CDS | 35.0% |
| !!! | TAATTTTTTTGGTGGTGTCC+GGG | - | chr2.3:67496022-67496041 | MS.gene05840:CDS | 35.0% |
| !!! | TTTTTTCTTCCGCTTGTTCT+TGG | + | chr2.3:67497014-67497033 | None:intergenic | 35.0% |
| AAATAGAAAACAGGGGCGAA+AGG | + | chr2.3:67494108-67494127 | None:intergenic | 40.0% | |
| AAGCTCTTGGAGACAACTAA+GGG | - | chr2.3:67496097-67496116 | MS.gene05840:intron | 40.0% | |
| AGATGCATCGTTCTGTTCAT+AGG | + | chr2.3:67494630-67494649 | None:intergenic | 40.0% | |
| ATCCACATACTAGACAATGC+AGG | - | chr2.3:67493834-67493853 | MS.gene05840:intron | 40.0% | |
| ATGACCTACTATTATAGGGG+GGG | + | chr2.3:67496159-67496178 | None:intergenic | 40.0% | |
| CACTCTATTTAGCTGCACTT+AGG | - | chr2.3:67495682-67495701 | MS.gene05840:intron | 40.0% | |
| CGACAACGAAAAAGGAACAA+AGG | - | chr2.3:67496508-67496527 | MS.gene05840:intron | 40.0% | |
| GAACAAAGGGAGTAATGTAG+AGG | - | chr2.3:67496522-67496541 | MS.gene05840:intron | 40.0% | |
| GAATGTGATGCCACATCATT+AGG | - | chr2.3:67495191-67495210 | MS.gene05840:intron | 40.0% | |
| GCGGAAGCTAAATAGAAAAC+AGG | + | chr2.3:67494117-67494136 | None:intergenic | 40.0% | |
| GGAAATGACCTATATTACCG+AGG | - | chr2.3:67496391-67496410 | MS.gene05840:intron | 40.0% | |
| TAAGCTCTTGGAGACAACTA+AGG | - | chr2.3:67496096-67496115 | MS.gene05840:intron | 40.0% | |
| TACCAACTGAGTTAAGCTCT+TGG | - | chr2.3:67496084-67496103 | MS.gene05840:intron | 40.0% | |
| TATGTGGATGTCAATGCGAA+TGG | + | chr2.3:67493823-67493842 | None:intergenic | 40.0% | |
| TCCACATACTAGACAATGCA+GGG | - | chr2.3:67493835-67493854 | MS.gene05840:intron | 40.0% | |
| TCTTTCTGCCAAACTTGTCT+GGG | - | chr2.3:67493797-67493816 | MS.gene05840:intron | 40.0% | |
| TGCAATGAAAGGCAAACAGA+AGG | + | chr2.3:67494784-67494803 | None:intergenic | 40.0% | |
| TGCTGCAAATATTGCTGCAT+TGG | - | chr2.3:67493975-67493994 | MS.gene05840:intron | 40.0% | |
| TGTCTTCTAAACAGAATGGG+TGG | + | chr2.3:67495805-67495824 | None:intergenic | 40.0% | |
| TGTGTGCAATTCAAAAGCCT+GGG | - | chr2.3:67494463-67494482 | MS.gene05840:intron | 40.0% | |
| TTCAACTTGCGATAGTCCAA+GGG | + | chr2.3:67493516-67493535 | None:intergenic | 40.0% | |
| TTCTTTCTGCCAAACTTGTC+TGG | - | chr2.3:67493796-67493815 | MS.gene05840:intron | 40.0% | |
| TTGTGCAGCCTTACAAAGAT+AGG | - | chr2.3:67493616-67493635 | MS.gene05840:intron | 40.0% | |
| TTTACCCCCCCTATAATAGT+AGG | - | chr2.3:67496152-67496171 | MS.gene05840:intron | 40.0% | |
| ! | ACTTGGTCTTTCACTTCTCA+GGG | - | chr2.3:67495530-67495549 | MS.gene05840:intron | 40.0% |
| ! | AGAGCTTAACTCAGTTGGTA+AGG | + | chr2.3:67496084-67496103 | None:intergenic | 40.0% |
| ! | CATCTCTGAAGACATTCAGA+AGG | - | chr2.3:67493998-67494017 | MS.gene05840:intron | 40.0% |
| ! | CGTGAGGTTTTCGTTTAGAT+AGG | - | chr2.3:67496616-67496635 | MS.gene05840:CDS | 40.0% |
| ! | TACTTGGTCTTTCACTTCTC+AGG | - | chr2.3:67495529-67495548 | MS.gene05840:intron | 40.0% |
| !! | CATAGGCATTGAAAGAGTGA+GGG | + | chr2.3:67494613-67494632 | None:intergenic | 40.0% |
| !! | GTAGGTCATTGACTCATTTC+CGG | - | chr2.3:67496170-67496189 | MS.gene05840:intron | 40.0% |
| !! | TCATAGGCATTGAAAGAGTG+AGG | + | chr2.3:67494614-67494633 | None:intergenic | 40.0% |
| !!! | AATTTTTTTGGTGGTGTCCG+GGG | - | chr2.3:67496023-67496042 | MS.gene05840:CDS | 40.0% |
| !!! | ATTTTGTTTTCCCCCTAACG+TGG | + | chr2.3:67495102-67495121 | None:intergenic | 40.0% |
| !!! | GGAGGGAGTATTGTTTTACA+TGG | + | chr2.3:67495857-67495876 | None:intergenic | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | - | chr2.3:67496243-67496262 | MS.gene05840:CDS | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | + | chr2.3:67496262-67496243 | None:intergenic | 40.0% |
| AAGGTCACGCTGTTAAACTG+AGG | + | chr2.3:67494089-67494108 | None:intergenic | 45.0% | |
| AATCCAAAGGTGACTGCAAC+TGG | + | chr2.3:67494208-67494227 | None:intergenic | 45.0% | |
| ACAAGTGCAGAGTAGCAAGA+AGG | - | chr2.3:67495214-67495233 | MS.gene05840:CDS | 45.0% | |
| ACAGCCTCTTCATGGTATGT+CGG | + | chr2.3:67494399-67494418 | None:intergenic | 45.0% | |
| ACCCTGCATTGTCTAGTATG+TGG | + | chr2.3:67493839-67493858 | None:intergenic | 45.0% | |
| ACGACATTCTTCCTCTGTTG+CGG | - | chr2.3:67495055-67495074 | MS.gene05840:intron | 45.0% | |
| ATTGACACTGCTCTAACTGC+TGG | - | chr2.3:67496947-67496966 | MS.gene05840:CDS | 45.0% | |
| CACAGCCATAAATCTCAACC+TGG | - | chr2.3:67496572-67496591 | MS.gene05840:intron | 45.0% | |
| CAGTCATTACAGCCTCTTCA+TGG | + | chr2.3:67494407-67494426 | None:intergenic | 45.0% | |
| CATGAAGAGGCTGTAATGAC+TGG | - | chr2.3:67494405-67494424 | MS.gene05840:intron | 45.0% | |
| CATTATAGACCGCGGTTTAC+GGG | - | chr2.3:67493740-67493759 | MS.gene05840:intron | 45.0% | |
| CTAGACCAGTTGAAGCTGAA+AGG | - | chr2.3:67495152-67495171 | MS.gene05840:intron | 45.0% | |
| CTCCAAGAGCTTAACTCAGT+TGG | + | chr2.3:67496089-67496108 | None:intergenic | 45.0% | |
| CTGCACTTGTCCTAATGATG+TGG | + | chr2.3:67495204-67495223 | None:intergenic | 45.0% | |
| CTTCACTGAATTCTCTCCCA+TGG | - | chr2.3:67493662-67493681 | MS.gene05840:intron | 45.0% | |
| GACAACTAAAAGGGAACGGA+GGG | + | chr2.3:67495874-67495893 | None:intergenic | 45.0% | |
| GCACACTTCACTGCAATGAA+AGG | + | chr2.3:67494795-67494814 | None:intergenic | 45.0% | |
| GCAGTTAGAGCAGTGTCAAT+TGG | + | chr2.3:67496947-67496966 | None:intergenic | 45.0% | |
| GCATTATAGACCGCGGTTTA+CGG | - | chr2.3:67493739-67493758 | MS.gene05840:intron | 45.0% | |
| GTGTGCAATTCAAAAGCCTG+GGG | - | chr2.3:67494464-67494483 | MS.gene05840:intron | 45.0% | |
| GTGTGTGCAATTCAAAAGCC+TGG | - | chr2.3:67494462-67494481 | MS.gene05840:intron | 45.0% | |
| GTTCAACTTGCGATAGTCCA+AGG | + | chr2.3:67493517-67493536 | None:intergenic | 45.0% | |
| TCAAAGGAAGGATCAGCCAT+GGG | + | chr2.3:67493681-67493700 | None:intergenic | 45.0% | |
| TCAACTTGCGATAGTCCAAG+GGG | + | chr2.3:67493515-67493534 | None:intergenic | 45.0% | |
| TCTTCTATCAGAGCTTCGAG+TGG | - | chr2.3:67493479-67493498 | MS.gene05840:CDS | 45.0% | |
| TGACAACTAAAAGGGAACGG+AGG | + | chr2.3:67495875-67495894 | None:intergenic | 45.0% | |
| TGTGCAATTCAAAAGCCTGG+GGG | - | chr2.3:67494465-67494484 | MS.gene05840:intron | 45.0% | |
| TTAGGACGCATTATAGACCG+CGG | - | chr2.3:67493732-67493751 | MS.gene05840:intron | 45.0% | |
| TTGACACTGCTCTAACTGCT+GGG | - | chr2.3:67496948-67496967 | MS.gene05840:CDS | 45.0% | |
| ! | AAAGCTTCTCTAGCTTCTCG+TGG | - | chr2.3:67495588-67495607 | MS.gene05840:intron | 45.0% |
| ! | CAGCAAGTTGGGTAAGAAAG+AGG | + | chr2.3:67493889-67493908 | None:intergenic | 45.0% |
| ! | TATTCTACAAGGAGTGCGTG+AGG | - | chr2.3:67496600-67496619 | MS.gene05840:intron | 45.0% |
| !! | AATAAAAAATAATAATTTAC+AGG | + | chr2.3:67496201-67496220 | None:intergenic | 5.0% |
| !! | ATAAAAAATAATAATTTACA+GGG | + | chr2.3:67496200-67496219 | None:intergenic | 5.0% |
| AAACTGAGGAAGCTGACCTC+AGG | + | chr2.3:67494075-67494094 | None:intergenic | 50.0% | |
| AACTCAACGGCAGATTCTCC+AGG | + | chr2.3:67493714-67493733 | None:intergenic | 50.0% | |
| ACATACATCCACCGCAACAG+AGG | + | chr2.3:67495069-67495088 | None:intergenic | 50.0% | |
| ACATTCTTCCTCTGTTGCGG+TGG | - | chr2.3:67495058-67495077 | MS.gene05840:intron | 50.0% | |
| ACTGACACCTTACCAGCTTG+AGG | + | chr2.3:67495270-67495289 | None:intergenic | 50.0% | |
| ACTGCTGGGCAGAGTAATGA+AGG | - | chr2.3:67496962-67496981 | MS.gene05840:CDS | 50.0% | |
| ACTGTCTTGATTTCCTGCGC+TGG | + | chr2.3:67496917-67496936 | None:intergenic | 50.0% | |
| AGAAGGCCTGAATGCTCGTT+GGG | - | chr2.3:67494015-67494034 | MS.gene05840:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr2.3:67494280-67494299 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | + | chr2.3:67494280-67494299 | None:intergenic | 50.0% | |
| AGTTGTAGTGCATCCTCCTG+AGG | - | chr2.3:67494056-67494075 | MS.gene05840:intron | 50.0% | |
| CTATCAGAGCTTCGAGTGGA+TGG | - | chr2.3:67493483-67493502 | MS.gene05840:CDS | 50.0% | |
| CTCAAAGGAAGGATCAGCCA+TGG | + | chr2.3:67493682-67493701 | None:intergenic | 50.0% | |
| CTCTACTTTCCCGTAAACCG+CGG | + | chr2.3:67493752-67493771 | None:intergenic | 50.0% | |
| CTGACACCTTACCAGCTTGA+GGG | + | chr2.3:67495269-67495288 | None:intergenic | 50.0% | |
| CTGTCAAGCCCAAGAACAAG+CGG | - | chr2.3:67497002-67497021 | MS.gene05840:CDS | 50.0% | |
| CTTCCAGTTGCAGTCACCTT+TGG | - | chr2.3:67494202-67494221 | MS.gene05840:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr2.3:67494281-67494300 | None:intergenic | 50.0% | |
| GCAGAGCGATTCAGTGTCAA+TGG | + | chr2.3:67493775-67493794 | None:intergenic | 50.0% | |
| GGAGAATCTGCCGTTGAGTT+AGG | - | chr2.3:67493714-67493733 | MS.gene05840:intron | 50.0% | |
| GGATCCGACATACCATGAAG+AGG | - | chr2.3:67494392-67494411 | MS.gene05840:intron | 50.0% | |
| GTGCAATTCAAAAGCCTGGG+GGG | - | chr2.3:67494466-67494485 | MS.gene05840:intron | 50.0% | |
| GTGCAGAGTAGCAAGAAGGA+TGG | - | chr2.3:67495218-67495237 | MS.gene05840:CDS | 50.0% | |
| TCTCGCCTTTCAGCTTCAAC+TGG | + | chr2.3:67495160-67495179 | None:intergenic | 50.0% | |
| TCTGTTGCGGTGGATGTATG+TGG | - | chr2.3:67495068-67495087 | MS.gene05840:intron | 50.0% | |
| TGACACCTTACCAGCTTGAG+GGG | + | chr2.3:67495268-67495287 | None:intergenic | 50.0% | |
| TGTCTCGCCCAATTGGATCT+CGG | + | chr2.3:67493568-67493587 | None:intergenic | 50.0% | |
| !! | ATTTCCTGCGCTGGTTCTTC+TGG | + | chr2.3:67496908-67496927 | None:intergenic | 50.0% |
| AAGGCCTGAATGCTCGTTGG+GGG | - | chr2.3:67494017-67494036 | MS.gene05840:intron | 55.0% | |
| AATTCAAAAGCCTGGGGGGC+AGG | - | chr2.3:67494470-67494489 | MS.gene05840:intron | 55.0% | |
| AGAGCTTCGAGTGGATGGTC+GGG | - | chr2.3:67493488-67493507 | MS.gene05840:CDS | 55.0% | |
| ATTCAAAAGCCTGGGGGGCA+GGG | - | chr2.3:67494471-67494490 | MS.gene05840:intron | 55.0% | |
| CAACGGCAGATTCTCCAGGA+TGG | + | chr2.3:67493710-67493729 | None:intergenic | 55.0% | |
| CAGAAGGCCTGAATGCTCGT+TGG | - | chr2.3:67494014-67494033 | MS.gene05840:intron | 55.0% | |
| CAGAGCTTCGAGTGGATGGT+CGG | - | chr2.3:67493487-67493506 | MS.gene05840:CDS | 55.0% | |
| GAAGGCCTGAATGCTCGTTG+GGG | - | chr2.3:67494016-67494035 | MS.gene05840:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+GGG | + | chr2.3:67494279-67494298 | None:intergenic | 55.0% | |
| GCGAATGGCCCAGACAAGTT+TGG | + | chr2.3:67493808-67493827 | None:intergenic | 55.0% | |
| GCTGATCCTTCCTTTGAGCC+TGG | - | chr2.3:67493684-67493703 | MS.gene05840:intron | 55.0% | |
| GGGTCTGCCGAGATCCAATT+GGG | - | chr2.3:67493558-67493577 | MS.gene05840:CDS | 55.0% | |
| GTGGAACCACTGCCACGTTA+GGG | - | chr2.3:67495087-67495106 | MS.gene05840:intron | 55.0% | |
| TAAGCCAGAAGAACCAGCGC+AGG | - | chr2.3:67496901-67496920 | MS.gene05840:CDS | 55.0% | |
| TGACACGTGTCTCGCCCAAT+TGG | + | chr2.3:67493575-67493594 | None:intergenic | 55.0% | |
| TGGAACCACTGCCACGTTAG+GGG | - | chr2.3:67495088-67495107 | MS.gene05840:intron | 55.0% | |
| TGGGTCTGCCGAGATCCAAT+TGG | - | chr2.3:67493557-67493576 | MS.gene05840:CDS | 55.0% | |
| TGTGGAACCACTGCCACGTT+AGG | - | chr2.3:67495086-67495105 | MS.gene05840:intron | 55.0% | |
| ! | TTTTCCCCCTAACGTGGCAG+TGG | + | chr2.3:67495096-67495115 | None:intergenic | 55.0% |
| AATGTCCGGGGTTCGAACCC+CGG | + | chr2.3:67496043-67496062 | None:intergenic | 60.0% | |
| AGAGAGAGAGAGAGGGGGAG+AGG | + | chr2.3:67494274-67494293 | None:intergenic | 60.0% | |
| AGGCCTGAATGCTCGTTGGG+GGG | - | chr2.3:67494018-67494037 | MS.gene05840:intron | 60.0% | |
| CTGAGGAAGCTGACCTCAGG+AGG | + | chr2.3:67494072-67494091 | None:intergenic | 60.0% | |
| GAGAGAGAGAGAGGGGGAGA+GGG | + | chr2.3:67494273-67494292 | None:intergenic | 60.0% | |
| GAGCTTCGAGTGGATGGTCG+GGG | - | chr2.3:67493489-67493508 | MS.gene05840:CDS | 60.0% | |
| GCAGATTCTCCAGGATGGCC+AGG | + | chr2.3:67493705-67493724 | None:intergenic | 60.0% | |
| GGAACCACTGCCACGTTAGG+GGG | - | chr2.3:67495089-67495108 | MS.gene05840:intron | 60.0% | |
| GGATGGCCAGGCTCAAAGGA+AGG | + | chr2.3:67493693-67493712 | None:intergenic | 60.0% | |
| TCCAGGATGGCCAGGCTCAA+AGG | + | chr2.3:67493697-67493716 | None:intergenic | 60.0% | |
| TCCTTTGAGCCTGGCCATCC+TGG | - | chr2.3:67493693-67493712 | MS.gene05840:intron | 60.0% | |
| TCTCCCCCCAACGAGCATTC+AGG | + | chr2.3:67494024-67494043 | None:intergenic | 60.0% | |
| TGAATGCTCGTTGGGGGGAG+AGG | - | chr2.3:67494023-67494042 | MS.gene05840:intron | 60.0% | |
| TTATCGGTGGCCCCTCAAGC+TGG | - | chr2.3:67495255-67495274 | MS.gene05840:CDS | 60.0% | |
| AGAGAGAGAGGGGGAGAGGG+AGG | + | chr2.3:67494270-67494289 | None:intergenic | 65.0% | |
| GAGAGAGAGGGGGAGAGGGA+GGG | + | chr2.3:67494269-67494288 | None:intergenic | 65.0% | |
| GGTGGCCCCTCAAGCTGGTA+AGG | - | chr2.3:67495260-67495279 | MS.gene05840:CDS | 65.0% | |
| TGAAAGACACCCTGCCCCCC+AGG | + | chr2.3:67494483-67494502 | None:intergenic | 65.0% | |
| TGCTCGTTGGGGGGAGAGGA+TGG | - | chr2.3:67494027-67494046 | MS.gene05840:intron | 65.0% | |
| AGTGGATGGTCGGGGCCCCT+TGG | - | chr2.3:67493497-67493516 | MS.gene05840:CDS | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2.3:67496035-67496054 | MS.gene05840:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 67493414 | 67497057 | 67493414 | ID=MS.gene05840 |
| chr2.3 | mRNA | 67493414 | 67497057 | 67493414 | ID=MS.gene05840.t1;Parent=MS.gene05840 |
| chr2.3 | exon | 67496615 | 67497057 | 67496615 | ID=MS.gene05840.t1.exon1;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67496615 | 67497057 | 67496615 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67496394 | 67496508 | 67496394 | ID=MS.gene05840.t1.exon2;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67496394 | 67496508 | 67496394 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67496222 | 67496302 | 67496222 | ID=MS.gene05840.t1.exon3;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67496222 | 67496302 | 67496222 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67495896 | 67496084 | 67495896 | ID=MS.gene05840.t1.exon4;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67495896 | 67496084 | 67495896 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67495195 | 67495457 | 67495195 | ID=MS.gene05840.t1.exon5;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67495195 | 67495457 | 67495195 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67494862 | 67494920 | 67494862 | ID=MS.gene05840.t1.exon6;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67494862 | 67494920 | 67494862 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| chr2.3 | exon | 67493414 | 67493613 | 67493414 | ID=MS.gene05840.t1.exon7;Parent=MS.gene05840.t1 |
| chr2.3 | CDS | 67493414 | 67493613 | 67493414 | ID=cds.MS.gene05840.t1;Parent=MS.gene05840.t1 |
| Gene Sequence |
| Protein sequence |
