AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059009

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059009.t1 MTR_1g069110 73.780 492 92 4 1 489 1 458 0.0 708
MS.gene059009.t1 MTR_7g099570 46.048 291 142 5 10 286 1 290 5.93e-74 244
MS.gene059009.t1 MTR_7g099570 53.723 188 86 1 280 466 402 589 9.90e-61 209
MS.gene059009.t1 MTR_7g099580 40.237 338 132 8 10 341 4 277 2.28e-71 230
MS.gene059009.t1 MTR_7g099560 38.760 258 82 7 213 468 1 184 3.74e-43 153
MS.gene059009.t1 MTR_8g073260 29.293 396 230 12 5 380 1 366 5.32e-39 147
MS.gene059009.t1 MTR_3g016210 26.891 476 286 13 5 457 1 437 7.77e-39 147
MS.gene059009.t1 MTR_8g039620 27.723 404 250 8 5 393 1 377 1.28e-38 146
MS.gene059009.t1 MTR_8g069880 24.845 483 293 12 21 483 10 442 1.36e-36 141
MS.gene059009.t1 MTR_8g072510 25.902 471 281 13 21 469 13 437 2.11e-36 140
MS.gene059009.t1 MTR_8g068990 28.052 385 223 9 21 391 15 359 4.05e-36 139
MS.gene059009.t1 MTR_7g021090 27.543 403 235 12 5 391 1 362 2.26e-35 136
MS.gene059009.t1 MTR_7g099550 56.731 104 45 0 77 180 136 239 7.37e-35 130
MS.gene059009.t1 MTR_2g101310 26.281 449 249 11 46 430 134 564 2.43e-33 134
MS.gene059009.t1 MTR_2g101310 30.348 201 131 5 12 209 33 227 4.44e-14 75.1
MS.gene059009.t1 MTR_8g066670 25.474 475 290 14 3 458 1065 1494 7.39e-33 133
MS.gene059009.t1 MTR_8g062410 25.591 465 287 12 5 456 1 419 2.41e-32 129
MS.gene059009.t1 MTR_8g467780 27.040 429 261 11 21 429 14 410 3.73e-32 128
MS.gene059009.t1 MTR_7g087540 39.429 175 84 5 297 468 24 179 8.28e-31 118
MS.gene059009.t1 MTR_3g105650 25.298 419 252 9 21 429 8 375 2.01e-30 123
MS.gene059009.t1 MTR_2g101320 25.333 450 253 9 46 430 134 565 8.33e-30 123
MS.gene059009.t1 MTR_1g059930 27.822 381 227 12 18 381 12 361 4.53e-29 119
MS.gene059009.t1 MTR_8g019450 35.398 226 112 8 272 465 2 225 7.73e-29 114
MS.gene059009.t1 MTR_7g451420 27.616 344 207 8 5 338 1 312 1.67e-28 115
MS.gene059009.t1 MTR_8g040930 27.143 350 205 9 60 390 1 319 8.51e-28 114
MS.gene059009.t1 MTR_8g041240 27.143 350 205 9 60 390 1 319 8.51e-28 114
MS.gene059009.t1 MTR_8g019260 37.013 154 96 1 305 457 12 165 1.34e-27 109
MS.gene059009.t1 MTR_8g019110 37.013 154 96 1 305 457 12 165 1.34e-27 109
MS.gene059009.t1 MTR_0514s0010 33.333 228 121 7 268 465 1 227 1.67e-27 110
MS.gene059009.t1 MTR_0470s0020 35.714 210 109 6 281 465 17 225 5.62e-27 109
MS.gene059009.t1 MTR_8g019050 35.714 210 109 6 281 465 17 225 5.62e-27 109
MS.gene059009.t1 MTR_8g018980 35.268 224 115 8 272 465 2 225 6.48e-27 109
MS.gene059009.t1 MTR_1g115575 24.477 478 317 14 18 488 135 575 3.63e-26 112
MS.gene059009.t1 MTR_2g096190 25.121 414 240 11 21 420 108 465 4.35e-26 111
MS.gene059009.t1 MTR_8g019290 41.085 129 72 3 306 432 13 139 2.70e-25 102
MS.gene059009.t1 MTR_2g101310 25.490 357 202 8 49 344 137 490 7.07e-25 107
MS.gene059009.t1 MTR_2g101310 30.348 201 131 5 12 209 33 227 1.52e-13 73.2
MS.gene059009.t1 MTR_4g062100 25.067 375 256 10 53 420 108 464 1.16e-24 107
MS.gene059009.t1 MTR_7g117620 25.051 495 316 16 9 488 78 532 6.98e-24 105
MS.gene059009.t1 MTR_1g032100 25.581 387 263 8 9 392 50 414 1.27e-23 104
MS.gene059009.t1 MTR_0470s0010 28.804 184 106 4 282 457 6 172 2.66e-22 94.7
MS.gene059009.t1 MTR_8g019020 28.804 184 106 4 282 457 6 172 2.66e-22 94.7
MS.gene059009.t1 MTR_7g087560 34.682 173 80 4 297 469 24 163 6.42e-22 93.2
MS.gene059009.t1 MTR_8g019280 35.714 140 90 0 324 463 1 140 7.30e-22 92.4
MS.gene059009.t1 MTR_7g100390 25.416 421 270 15 18 420 53 447 1.75e-21 97.8
MS.gene059009.t1 MTR_8g019380 31.278 227 123 8 272 469 2 224 1.77e-21 94.7
MS.gene059009.t1 MTR_7g099600 55.814 86 38 0 371 456 2 87 4.96e-21 87.8
MS.gene059009.t1 MTR_7g055630 36.090 133 78 3 306 432 14 145 7.83e-21 90.5
MS.gene059009.t1 MTR_7g100430 25.788 349 225 11 43 385 148 468 2.46e-20 94.7
MS.gene059009.t1 MTR_8g105260 23.276 348 244 7 47 392 95 421 8.37e-20 92.8
MS.gene059009.t1 MTR_8g019060 30.986 213 131 5 267 465 41 251 4.70e-18 87.0
MS.gene059009.t1 MTR_8g019060 31.609 174 111 4 303 468 273 446 4.67e-17 84.0
MS.gene059009.t1 MTR_2g033050 28.655 171 119 2 64 231 212 382 3.16e-15 77.8
MS.gene059009.t1 MTR_8g019440 33.333 162 101 2 311 465 2 163 5.70e-15 73.6
MS.gene059009.t1 MTR_5g085810 22.782 417 262 12 47 436 298 681 7.40e-15 77.8
MS.gene059009.t1 MTR_5g085480 23.171 492 279 15 18 463 54 492 1.08e-14 77.0
MS.gene059009.t1 MTR_5g085480 23.171 492 279 15 18 463 214 652 1.49e-14 76.6
MS.gene059009.t1 MTR_5g085830 22.991 448 275 16 18 436 247 653 2.11e-14 76.3
MS.gene059009.t1 MTR_5g085500 28.205 156 109 2 80 232 1 156 1.34e-12 70.1
MS.gene059009.t1 MTR_2g096760 30.409 171 104 5 50 208 11 178 1.91e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059009.t1 AT5G51160 29.894 378 229 10 69 432 34 389 5.90e-39 147
MS.gene059009.t1 AT4G10720 27.160 405 247 10 25 416 12 381 1.32e-38 146
MS.gene059009.t1 AT4G10720 29.483 329 197 7 25 340 12 318 1.56e-36 140
MS.gene059009.t1 AT1G14500 25.843 445 264 13 18 437 5 408 4.12e-33 130
MS.gene059009.t1 AT5G15500 27.957 465 270 17 16 465 4 418 7.71e-32 127
MS.gene059009.t1 AT1G14480 22.857 455 299 9 18 461 5 418 1.00e-30 124
MS.gene059009.t1 AT3G13950 36.842 190 114 3 281 466 4 191 3.73e-28 111
MS.gene059009.t1 AT4G13266 34.146 205 115 7 274 468 2 196 2.97e-27 109
MS.gene059009.t1 AT5G54620 24.941 421 264 10 24 417 11 406 3.47e-26 110
MS.gene059009.t1 AT3G09550 24.257 404 257 11 28 420 166 531 1.70e-25 110
MS.gene059009.t1 AT3G09550 24.257 404 257 11 28 420 166 531 1.70e-25 110
MS.gene059009.t1 AT3G09550 24.257 404 257 11 28 420 173 538 1.91e-25 110
MS.gene059009.t1 AT5G60070 27.415 383 253 12 53 427 111 476 2.48e-25 109
MS.gene059009.t1 AT3G12360 26.509 381 237 12 53 420 155 505 5.96e-25 108
MS.gene059009.t1 AT3G12360 33.071 127 82 3 18 144 190 313 4.74e-11 65.5
MS.gene059009.t1 AT3G12360 26.247 381 238 11 53 420 167 517 6.28e-25 108
MS.gene059009.t1 AT3G12360 33.071 127 82 3 18 144 202 325 4.65e-11 65.5
MS.gene059009.t1 AT5G54610 28.037 321 189 8 24 329 11 304 8.51e-25 107
MS.gene059009.t1 AT2G01680 23.276 348 244 6 47 392 91 417 6.61e-22 99.4
MS.gene059009.t1 AT5G54710 24.259 371 253 9 69 431 227 577 1.20e-21 99.0
MS.gene059009.t1 AT5G54710 23.989 371 254 9 69 431 182 532 1.66e-21 98.2
MS.gene059009.t1 AT2G31820 25.754 431 276 15 5 420 182 583 2.80e-21 97.8
MS.gene059009.t1 AT1G34050 24.267 375 244 9 64 430 161 503 2.52e-20 94.7
MS.gene059009.t1 AT5G02620 24.051 395 241 11 54 420 95 458 3.65e-20 94.0
MS.gene059009.t1 AT5G02620 24.051 395 241 11 54 420 95 458 3.65e-20 94.0
MS.gene059009.t1 AT5G02620 24.051 395 241 11 54 420 95 458 3.65e-20 94.0
MS.gene059009.t1 AT1G05640 25.467 428 274 16 9 420 150 548 6.46e-20 93.6
MS.gene059009.t1 AT1G14480 31.169 154 105 1 18 170 5 158 5.08e-19 89.4
MS.gene059009.t1 AT1G07710 24.893 466 282 12 21 479 108 512 8.56e-19 89.7
MS.gene059009.t1 AT1G07710 24.893 466 282 12 21 479 108 512 8.56e-19 89.7
MS.gene059009.t1 AT5G54700 23.450 371 204 11 115 480 28 323 1.61e-18 87.4
MS.gene059009.t1 AT1G10340 23.953 430 270 14 34 437 118 516 1.96e-18 88.6
MS.gene059009.t1 AT1G10340 24.339 378 240 12 81 437 168 520 2.96e-18 88.2
MS.gene059009.t1 AT5G02620 23.317 416 241 12 54 420 95 481 5.46e-17 84.0
MS.gene059009.t1 AT5G02620 23.317 416 241 12 54 420 95 481 5.46e-17 84.0
MS.gene059009.t1 AT4G03500 23.765 425 249 14 13 420 214 580 2.01e-16 82.8
MS.gene059009.t1 AT4G03500 23.765 425 249 14 13 420 191 557 2.07e-16 82.4
MS.gene059009.t1 AT4G03500 23.765 425 249 14 13 420 191 557 2.07e-16 82.4
MS.gene059009.t1 AT4G03440 24.130 460 279 17 13 454 264 671 2.10e-16 82.8
MS.gene059009.t1 AT4G03440 24.130 460 279 17 13 454 264 671 2.10e-16 82.8
MS.gene059009.t1 AT4G03440 24.130 460 279 17 13 454 271 678 2.21e-16 82.8
MS.gene059009.t1 AT4G03470 23.733 375 220 10 64 428 284 602 5.48e-16 81.3
MS.gene059009.t1 AT4G03450 21.649 388 240 12 54 428 227 563 1.45e-15 79.7
MS.gene059009.t1 AT4G03450 21.649 388 240 12 54 428 227 563 1.80e-15 79.7
MS.gene059009.t1 AT4G03480 23.920 301 186 9 54 344 357 624 4.91e-15 78.2
MS.gene059009.t1 AT4G03480 23.920 301 186 9 54 344 360 627 5.57e-15 78.2
MS.gene059009.t1 AT1G03670 23.773 387 225 11 51 421 216 548 1.63e-14 76.6
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G05040 25.753 365 195 13 1 350 237 540 2.18e-14 76.3
MS.gene059009.t1 AT4G14390 27.083 336 192 11 5 335 256 543 2.05e-13 73.2
MS.gene059009.t1 AT4G14390 26.190 336 194 10 5 335 237 523 2.48e-13 72.8
MS.gene059009.t1 AT4G14390 26.190 336 194 10 5 335 256 542 2.64e-13 72.8
MS.gene059009.t1 AT5G50140 25.481 208 132 6 49 238 26 228 1.92e-12 69.7
MS.gene059009.t1 AT5G15500 27.072 362 199 17 119 465 1 312 2.33e-12 68.6
MS.gene059009.t1 AT4G14390 30.047 213 130 5 5 213 237 434 3.09e-12 69.3

Find 90 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTGAATAACTCCTTTA+AGG 0.092289 1.2:+51873469 None:intergenic
ATTGCTGCTGTTCTTATTTC+AGG 0.164280 1.2:+51871222 None:intergenic
TAACTTGTGCAGTTTGAATT+TGG 0.249371 1.2:+51870444 None:intergenic
TTACATATAGCCTCTCTTCT+TGG 0.260364 1.2:-51873806 MS.gene059009:CDS
ATCTACAATTCCAAGGTAAT+TGG 0.266877 1.2:-51870957 MS.gene059009:CDS
TGTAATGGAGTTTCATTATA+GGG 0.299569 1.2:+51873824 None:intergenic
ACCTTGGAATTGTAGATACT+TGG 0.320981 1.2:+51870963 None:intergenic
ACTCACGTACGCGTTTGCTC+TGG 0.329819 1.2:-51870602 MS.gene059009:CDS
AGTTAGACTCAAACAAATTA+AGG 0.333576 1.2:-51873381 MS.gene059009:intron
ATGTAATGGAGTTTCATTAT+AGG 0.336117 1.2:+51873823 None:intergenic
ACATCATGACCTTATTCTTA+AGG 0.338349 1.2:+51870668 None:intergenic
CATCATGACCTTATTCTTAA+GGG 0.374973 1.2:+51870669 None:intergenic
TGGCAAGAAAATACAAATAC+TGG 0.376493 1.2:-51870844 MS.gene059009:CDS
GTTGTGCTTCTCCTTATTAG+TGG 0.383085 1.2:-51870697 MS.gene059009:CDS
GTACGCGTTTGCTCTGGGTT+TGG 0.383450 1.2:-51870596 MS.gene059009:CDS
GTTACCCGCGTGTTGTAACT+TGG 0.395378 1.2:-51870534 MS.gene059009:CDS
TTGATTTGGTTGTTCTTGAT+TGG 0.397711 1.2:+51871041 None:intergenic
TAAGTCCGCCAGGTGGTGTT+TGG 0.404642 1.2:-51870864 MS.gene059009:CDS
CTGCAAAAGTAAGTATTCTA+TGG 0.406886 1.2:+51871245 None:intergenic
ACTCCTTTAAGGCCTCAAAA+TGG 0.407906 1.2:+51873480 None:intergenic
GGACTCAATTGCACTACTTA+TGG 0.414169 1.2:-51870820 MS.gene059009:CDS
CTCTACAATGCATCACTAAA+CGG 0.416585 1.2:-51873914 MS.gene059009:CDS
AGGGAGAGAGTGAAACTTTG+TGG 0.417625 1.2:+51873843 None:intergenic
AGCAAATGAAGATGTTTGTT+TGG 0.420847 1.2:-51873651 MS.gene059009:CDS
TTCACAACGTGAATCGAATC+TGG 0.421280 1.2:+51873542 None:intergenic
TTTGCATTTAGCTGCGAAAA+GGG 0.427624 1.2:-51873603 MS.gene059009:CDS
GAGTTATTCAATTCAGTAAG+AGG 0.427817 1.2:-51873461 MS.gene059009:CDS
CTTTGCATTTAGCTGCGAAA+AGG 0.427839 1.2:-51873604 MS.gene059009:CDS
CTCACGTACGCGTTTGCTCT+GGG 0.439047 1.2:-51870601 MS.gene059009:CDS
CAGGTCAGGCTTCACAACTT+TGG 0.443752 1.2:-51871190 MS.gene059009:CDS
TCCACTTCATTGGTGAAACT+TGG 0.446592 1.2:+51873746 None:intergenic
TGTGTCATCTTCTAGATTTG+CGG 0.447230 1.2:+51873946 None:intergenic
CAGCAGCAATTGCTATGAAC+AGG 0.467072 1.2:-51871209 MS.gene059009:CDS
AAGAGAGGAAAAGAAAGAAA+TGG 0.476405 1.2:+51870723 None:intergenic
TCTTGATTAGAAGATTGATT+TGG 0.481340 1.2:+51871027 None:intergenic
TTGCACATGTGTATTTGGTA+TGG 0.485137 1.2:-51873503 MS.gene059009:CDS
TTTCTTCTATCCAATTACCT+TGG 0.494158 1.2:+51870947 None:intergenic
GAAGAAATGTTAATTGAAGT+CGG 0.497265 1.2:-51871123 MS.gene059009:CDS
TTACCCGCGTGTTGTAACTT+GGG 0.497451 1.2:-51870533 MS.gene059009:CDS
ACTTGCTGAATAATATGATA+AGG 0.498621 1.2:+51870568 None:intergenic
CTTCATTTAGCTTCAGCTGA+AGG 0.498852 1.2:-51873704 MS.gene059009:CDS
AGAAGAGAGGCTATATGTAA+TGG 0.505246 1.2:+51873809 None:intergenic
GCAATTGCTATGAACAGGTC+AGG 0.512758 1.2:-51871204 MS.gene059009:CDS
ACCAATGAAGTGGACTCAAA+AGG 0.514134 1.2:-51873737 MS.gene059009:CDS
GAAACTTTGTGGAGTAAAAG+AGG 0.514459 1.2:+51873854 None:intergenic
AAGAACATCCAAATGAAAGA+AGG 0.523294 1.2:-51871008 MS.gene059009:CDS
ATTCACGTTGTGAATGATGA+TGG 0.528117 1.2:-51873533 MS.gene059009:CDS
CTTTACGAATTCATGTGGCC+AGG 0.530040 1.2:+51870762 None:intergenic
ACTTATGGTGTATGTGAAGC+AGG 0.532106 1.2:-51870805 MS.gene059009:CDS
CTTTGGAGGTGTTAGATCCC+TGG 0.532590 1.2:-51871173 MS.gene059009:CDS
CAAATGAAAGAAGGAAAATG+TGG 0.533149 1.2:-51870999 MS.gene059009:CDS
CAATCAACATTAAGTCCGCC+AGG 0.537352 1.2:-51870874 MS.gene059009:CDS
GTCAGGCTTCACAACTTTGG+AGG 0.538537 1.2:-51871187 MS.gene059009:CDS
CTTTGTGATGCTGCATGTTG+CGG 0.541509 1.2:+51871069 None:intergenic
ACCAAGTTTCACCAATGAAG+TGG 0.544752 1.2:-51873747 MS.gene059009:CDS
TGCATTTAGCTGCGAAAAGG+GGG 0.560379 1.2:-51873601 MS.gene059009:CDS
TTGCATTTAGCTGCGAAAAG+GGG 0.561017 1.2:-51873602 MS.gene059009:CDS
GCTTATAAAATCTCTTGACC+AGG 0.564370 1.2:+51871155 None:intergenic
TACCCGCGTGTTGTAACTTG+GGG 0.566004 1.2:-51870532 MS.gene059009:CDS
GGCGTGGAATTCATATATAC+TGG 0.566937 1.2:+51871090 None:intergenic
AAGGGGAGCATTGATGTTGG+TGG 0.576116 1.2:-51870923 MS.gene059009:CDS
ATCATGACCTTATTCTTAAG+GGG 0.576143 1.2:+51870670 None:intergenic
GAGAAGCACAACACCAAGAG+AGG 0.582743 1.2:+51870708 None:intergenic
AACAAGGGGAGCATTGATGT+TGG 0.590579 1.2:-51870926 MS.gene059009:CDS
CAGCTGAAGCTAAATGAAGA+GGG 0.593840 1.2:+51873708 None:intergenic
TCAGCTGAAGCTAAATGAAG+AGG 0.610021 1.2:+51873707 None:intergenic
TTCTAAGTGTCCAAGAAGAG+AGG 0.612839 1.2:+51873796 None:intergenic
GTAATTGGATAGAAGAAACA+AGG 0.615840 1.2:-51870942 MS.gene059009:CDS
TCCAAGTATCTACAATTCCA+AGG 0.616695 1.2:-51870964 MS.gene059009:CDS
ATGAACTTTACGAATTCATG+TGG 0.618290 1.2:+51870757 None:intergenic
TTAAGAATAAGGTCATGATG+TGG 0.621215 1.2:-51870666 MS.gene059009:CDS
TAATTGGATAGAAGAAACAA+GGG 0.621684 1.2:-51870941 MS.gene059009:CDS
TAAGAATAAGGTCATGATGT+GGG 0.624421 1.2:-51870665 MS.gene059009:CDS
AGCTGAAGGACACACTGAGG+TGG 0.626270 1.2:-51873690 MS.gene059009:CDS
CTTATAAAATCTCTTGACCA+GGG 0.628861 1.2:+51871156 None:intergenic
AAATGAAAGAAGGAAAATGT+GGG 0.636464 1.2:-51870998 MS.gene059009:CDS
TCATGACCTTATTCTTAAGG+GGG 0.638445 1.2:+51870671 None:intergenic
TGATGCTGCATGTTGCGGCG+TGG 0.639755 1.2:+51871074 None:intergenic
TGTTGATTGAAAAGTCATTG+TGG 0.646814 1.2:+51870888 None:intergenic
AAACTTTGTGGAGTAAAAGA+GGG 0.648448 1.2:+51873855 None:intergenic
GTTTGCAAGAGCAAATTACT+CGG 0.652309 1.2:-51870413 MS.gene059009:CDS
TCTTGCCAAACACCACCTGG+CGG 0.659487 1.2:+51870859 None:intergenic
ACGCCCCAAGTTACAACACG+CGG 0.663681 1.2:+51870529 None:intergenic
CGCCCCAAGTTACAACACGC+GGG 0.670277 1.2:+51870530 None:intergenic
CAAGAAAATACAAATACTGG+AGG 0.676007 1.2:-51870841 MS.gene059009:CDS
AGTCATTGTGGCAATTACAG+TGG 0.700366 1.2:+51870900 None:intergenic
AATTGGATAGAAGAAACAAG+GGG 0.730527 1.2:-51870940 MS.gene059009:CDS
TTCAGCTGAAGGACACACTG+AGG 0.735387 1.2:-51873693 MS.gene059009:CDS
TGACATGAATGTGACAGCGA+CGG 0.741823 1.2:+51870624 None:intergenic
TCAACATTAAGTCCGCCAGG+TGG 0.747812 1.2:-51870871 MS.gene059009:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTAATAATAATACTA+GGG - chr1.2:51871245-51871264 MS.gene059009:CDS 10.0%
!! TAACAATTAATAATAATACT+AGG - chr1.2:51871244-51871263 MS.gene059009:CDS 10.0%
!! AATAATTAATTAAAGATCGT+TGG - chr1.2:51872860-51872879 MS.gene059009:intron 15.0%
!! ACAATTAATAATAATACTAG+GGG - chr1.2:51871246-51871265 MS.gene059009:CDS 15.0%
!! AGATGATTTAATAATCAATT+AGG + chr1.2:51871350-51871369 None:intergenic 15.0%
!! TATTAATTGTTAGTATTATG+CGG + chr1.2:51871236-51871255 None:intergenic 15.0%
!!! TTAACATTTCTTCAATTTTA+AGG + chr1.2:51873240-51873259 None:intergenic 15.0%
!! GATTTAATAATCAATTAGGA+TGG + chr1.2:51871346-51871365 None:intergenic 20.0%
!! TTCTATGTTATTCAAAGATA+AGG - chr1.2:51871665-51871684 MS.gene059009:intron 20.0%
!! TTGGATTAAAACAAAATAGA+GGG - chr1.2:51872879-51872898 MS.gene059009:intron 20.0%
!!! AAAGGGTATATTAGTAATTT+TGG - chr1.2:51872680-51872699 MS.gene059009:intron 20.0%
!!! AACGTAATTTAAGTTTACAT+AGG - chr1.2:51872242-51872261 MS.gene059009:intron 20.0%
!!! AAGGGTATATTAGTAATTTT+GGG - chr1.2:51872681-51872700 MS.gene059009:intron 20.0%
!!! TGATTTAATTTTACGTAGAA+GGG - chr1.2:51872218-51872237 MS.gene059009:intron 20.0%
!!! TTAGAATGATAATGAAAGAA+GGG + chr1.2:51871961-51871980 None:intergenic 20.0%
!!! TTGATTTAATTTTACGTAGA+AGG - chr1.2:51872217-51872236 MS.gene059009:intron 20.0%
!!! TTTAGAATGATAATGAAAGA+AGG + chr1.2:51871962-51871981 None:intergenic 20.0%
!!! TTTTAGAAATTTACATGAAG+AGG + chr1.2:51871937-51871956 None:intergenic 20.0%
! AAACAAAAGACATTGTAGAA+GGG + chr1.2:51871047-51871066 None:intergenic 25.0%
! AAATGAAAGAAGGAAAATGT+GGG - chr1.2:51873372-51873391 MS.gene059009:intron 25.0%
! AATGACCAATGTTAGTATTA+TGG + chr1.2:51872959-51872978 None:intergenic 25.0%
! ACAATAGTCATGAACAAAAT+TGG + chr1.2:51871817-51871836 None:intergenic 25.0%
! AGAAACTTAACGAGTAATTA+TGG - chr1.2:51873001-51873020 MS.gene059009:intron 25.0%
! AGTTAGACTCAAACAAATTA+AGG - chr1.2:51870989-51871008 MS.gene059009:CDS 25.0%
! ATGACCAATGTTAGTATTAT+GGG + chr1.2:51872958-51872977 None:intergenic 25.0%
! ATGGTTGGATTAAAACTAAA+TGG + chr1.2:51871327-51871346 None:intergenic 25.0%
! ATTAATAATAATACTAGGGG+AGG - chr1.2:51871249-51871268 MS.gene059009:CDS 25.0%
! GAAGAAATGTTAATTGAAGT+CGG - chr1.2:51873247-51873266 MS.gene059009:intron 25.0%
! GATAAGGAGGATAAAATTAT+TGG - chr1.2:51871681-51871700 MS.gene059009:intron 25.0%
! GGGTGTAACTAAAATTATAT+GGG + chr1.2:51871877-51871896 None:intergenic 25.0%
! GGTGTAACTAAAATTATATG+GGG + chr1.2:51871876-51871895 None:intergenic 25.0%
! GTTGGATTAAAACAAAATAG+AGG - chr1.2:51872878-51872897 MS.gene059009:intron 25.0%
! TAAACAAAAGACATTGTAGA+AGG + chr1.2:51871048-51871067 None:intergenic 25.0%
! TAATAATCAATTAGGATGGT+TGG + chr1.2:51871342-51871361 None:intergenic 25.0%
! TAATTGGATAGAAGAAACAA+GGG - chr1.2:51873429-51873448 MS.gene059009:CDS 25.0%
! TAGTATATGTCGAACATATA+TGG - chr1.2:51872732-51872751 MS.gene059009:intron 25.0%
! TATGTTATTCAAAGATAAGG+AGG - chr1.2:51871668-51871687 MS.gene059009:intron 25.0%
! TCTTGATTAGAAGATTGATT+TGG + chr1.2:51873346-51873365 None:intergenic 25.0%
! TGAATTGAATAACTCCTTTA+AGG + chr1.2:51870904-51870923 None:intergenic 25.0%
! TGGGTGTAACTAAAATTATA+TGG + chr1.2:51871878-51871897 None:intergenic 25.0%
! TGTGACAATAAGAAAAACTA+AGG + chr1.2:51871121-51871140 None:intergenic 25.0%
! TTAATAATAATACTAGGGGA+GGG - chr1.2:51871250-51871269 MS.gene059009:intron 25.0%
! TTGGATTAAAACTAAATGGA+GGG + chr1.2:51871323-51871342 None:intergenic 25.0%
!! ACTTGCTGAATAATATGATA+AGG + chr1.2:51873805-51873824 None:intergenic 25.0%
!! AGGGTATATTAGTAATTTTG+GGG - chr1.2:51872682-51872701 MS.gene059009:intron 25.0%
!! ATGTAATGGAGTTTCATTAT+AGG + chr1.2:51870550-51870569 None:intergenic 25.0%
!! GATGTTGTTAATTTTACCAT+GGG - chr1.2:51872151-51872170 MS.gene059009:intron 25.0%
!! GATTTAGATTAGTACGATTT+TGG - chr1.2:51871093-51871112 MS.gene059009:CDS 25.0%
!! TGATGTTGTTAATTTTACCA+TGG - chr1.2:51872150-51872169 MS.gene059009:intron 25.0%
!! TGTAATGGAGTTTCATTATA+GGG + chr1.2:51870549-51870568 None:intergenic 25.0%
!! TTTACGTACATATTCTAAAG+AGG - chr1.2:51872281-51872300 MS.gene059009:intron 25.0%
!!! ATTTAATTGGCGATTTTAGT+AGG + chr1.2:51872033-51872052 None:intergenic 25.0%
AAACTTTGTGGAGTAAAAGA+GGG + chr1.2:51870518-51870537 None:intergenic 30.0%
AAATTCTTTGTGGGAATCAA+AGG - chr1.2:51871748-51871767 MS.gene059009:intron 30.0%
AACAAAAGACATTGTAGAAG+GGG + chr1.2:51871046-51871065 None:intergenic 30.0%
AAGAACATCCAAATGAAAGA+AGG - chr1.2:51873362-51873381 MS.gene059009:intron 30.0%
AAGAGAGGAAAAGAAAGAAA+TGG + chr1.2:51873650-51873669 None:intergenic 30.0%
AATTCTTTGTGGGAATCAAA+GGG - chr1.2:51871749-51871768 MS.gene059009:intron 30.0%
AATTGGATAGAAGAAACAAG+GGG - chr1.2:51873430-51873449 MS.gene059009:CDS 30.0%
ACATCATGACCTTATTCTTA+AGG + chr1.2:51873705-51873724 None:intergenic 30.0%
AGAAATCTGAATACGTTGTT+AGG + chr1.2:51872778-51872797 None:intergenic 30.0%
AGCAAATGAAGATGTTTGTT+TGG - chr1.2:51870719-51870738 MS.gene059009:CDS 30.0%
ATATGTCGAACATATATGGA+AGG - chr1.2:51872736-51872755 MS.gene059009:intron 30.0%
ATCATGACCTTATTCTTAAG+GGG + chr1.2:51873703-51873722 None:intergenic 30.0%
ATCTACAATTCCAAGGTAAT+TGG - chr1.2:51873413-51873432 MS.gene059009:CDS 30.0%
ATGAACTTTACGAATTCATG+TGG + chr1.2:51873616-51873635 None:intergenic 30.0%
ATTTAAGGAGTTGCGTAATA+AGG - chr1.2:51871185-51871204 MS.gene059009:CDS 30.0%
CAAATGAAAGAAGGAAAATG+TGG - chr1.2:51873371-51873390 MS.gene059009:intron 30.0%
CAAGAAAATACAAATACTGG+AGG - chr1.2:51873529-51873548 MS.gene059009:CDS 30.0%
CATCATGACCTTATTCTTAA+GGG + chr1.2:51873704-51873723 None:intergenic 30.0%
CTGCAAAAGTAAGTATTCTA+TGG + chr1.2:51873128-51873147 None:intergenic 30.0%
CTTATAAAATCTCTTGACCA+GGG + chr1.2:51873217-51873236 None:intergenic 30.0%
GAAATCTGAATACGTTGTTA+GGG + chr1.2:51872777-51872796 None:intergenic 30.0%
GACAATAGACTCATTACTTA+TGG - chr1.2:51873053-51873072 MS.gene059009:intron 30.0%
GAGTTATTCAATTCAGTAAG+AGG - chr1.2:51870909-51870928 MS.gene059009:CDS 30.0%
GTAATTGGATAGAAGAAACA+AGG - chr1.2:51873428-51873447 MS.gene059009:CDS 30.0%
GTTGGATTAAAACTAAATGG+AGG + chr1.2:51871324-51871343 None:intergenic 30.0%
TAACTCAAAAGAGTTACTCT+TGG - chr1.2:51872915-51872934 MS.gene059009:intron 30.0%
TAACTCACAAGAATTACTCT+TGG + chr1.2:51871287-51871306 None:intergenic 30.0%
TAAGAATAAGGTCATGATGT+GGG - chr1.2:51873705-51873724 MS.gene059009:CDS 30.0%
TAAGTCCTCATCTTTAAGTA+TGG - chr1.2:51871143-51871162 MS.gene059009:CDS 30.0%
TGACCAATGTTAGTATTATG+GGG + chr1.2:51872957-51872976 None:intergenic 30.0%
TGGCAAGAAAATACAAATAC+TGG - chr1.2:51873526-51873545 MS.gene059009:CDS 30.0%
TGTTGACCCAAAAAACAAAA+CGG + chr1.2:51873900-51873919 None:intergenic 30.0%
TTAAGAATAAGGTCATGATG+TGG - chr1.2:51873704-51873723 MS.gene059009:CDS 30.0%
TTTCTTCTATCCAATTACCT+TGG + chr1.2:51873426-51873445 None:intergenic 30.0%
TTTGATTCCCACAAAGAATT+TGG + chr1.2:51871749-51871768 None:intergenic 30.0%
! ATGCAAAATTCTAGTTGAAG+AGG + chr1.2:51871603-51871622 None:intergenic 30.0%
! ATTGTTTCTTAAGATTTGCC+TGG + chr1.2:51871440-51871459 None:intergenic 30.0%
! ATTTCTTTCTTTTCCTCTCT+TGG - chr1.2:51873649-51873668 MS.gene059009:CDS 30.0%
! CACATTTTCCTTCTTTCATT+TGG + chr1.2:51873373-51873392 None:intergenic 30.0%
! CTGCTTTCTAAAAACAAAGA+GGG - chr1.2:51870945-51870964 MS.gene059009:CDS 30.0%
! GGAAAATGTGGGAAAAATTT+TGG - chr1.2:51873383-51873402 MS.gene059009:CDS 30.0%
! TAACTTGTGCAGTTTGAATT+TGG + chr1.2:51873929-51873948 None:intergenic 30.0%
! TGTTGATTGAAAAGTCATTG+TGG + chr1.2:51873485-51873504 None:intergenic 30.0%
! TTACATGAAGAGGACAATTT+TGG + chr1.2:51871927-51871946 None:intergenic 30.0%
! TTGTTTCTTAAGATTTGCCT+GGG + chr1.2:51871439-51871458 None:intergenic 30.0%
!! GGAAGAGATGTTGATTTAAT+TGG + chr1.2:51872046-51872065 None:intergenic 30.0%
!! TTGATTTGGTTGTTCTTGAT+TGG + chr1.2:51873332-51873351 None:intergenic 30.0%
AATGTTAGTATTATGGGGGA+GGG + chr1.2:51872952-51872971 None:intergenic 35.0%
ACAATAACGATAAACACCCA+TGG + chr1.2:51872170-51872189 None:intergenic 35.0%
ACCTTGGAATTGTAGATACT+TGG + chr1.2:51873410-51873429 None:intergenic 35.0%
AGAAGAGAGGCTATATGTAA+TGG + chr1.2:51870564-51870583 None:intergenic 35.0%
ATGAATCGAGTACGTATCAA+TGG + chr1.2:51872067-51872086 None:intergenic 35.0%
ATGGAGTCCAAATTCTTTGT+GGG - chr1.2:51871739-51871758 MS.gene059009:intron 35.0%
ATTCACGTTGTGAATGATGA+TGG - chr1.2:51870837-51870856 MS.gene059009:CDS 35.0%
CAAAATAGAGGGATGTGATT+TGG - chr1.2:51872890-51872909 MS.gene059009:intron 35.0%
CTCTACAATGCATCACTAAA+CGG - chr1.2:51870456-51870475 MS.gene059009:CDS 35.0%
GAAACTTTGTGGAGTAAAAG+AGG + chr1.2:51870519-51870538 None:intergenic 35.0%
GACCAATGTTAGTATTATGG+GGG + chr1.2:51872956-51872975 None:intergenic 35.0%
GCTTATAAAATCTCTTGACC+AGG + chr1.2:51873218-51873237 None:intergenic 35.0%
GGGTGTAACTTGGATTATTT+GGG - chr1.2:51872702-51872721 MS.gene059009:intron 35.0%
GGTGTAACTTGGATTATTTG+GGG - chr1.2:51872703-51872722 MS.gene059009:intron 35.0%
GTTTGCAAGAGCAAATTACT+CGG - chr1.2:51873957-51873976 MS.gene059009:CDS 35.0%
TATGGAGTCCAAATTCTTTG+TGG - chr1.2:51871738-51871757 MS.gene059009:intron 35.0%
TCATGACCTTATTCTTAAGG+GGG + chr1.2:51873702-51873721 None:intergenic 35.0%
TCCAAGTATCTACAATTCCA+AGG - chr1.2:51873406-51873425 MS.gene059009:CDS 35.0%
TGTGTCATCTTCTAGATTTG+CGG + chr1.2:51870427-51870446 None:intergenic 35.0%
TTACATATAGCCTCTCTTCT+TGG - chr1.2:51870564-51870583 MS.gene059009:CDS 35.0%
TTGCACATGTGTATTTGGTA+TGG - chr1.2:51870867-51870886 MS.gene059009:CDS 35.0%
TTTGCATTTAGCTGCGAAAA+GGG - chr1.2:51870767-51870786 MS.gene059009:CDS 35.0%
! AAATTCTAGTTGAAGAGGTG+AGG + chr1.2:51871598-51871617 None:intergenic 35.0%
! ATTGCTGCTGTTCTTATTTC+AGG + chr1.2:51873151-51873170 None:intergenic 35.0%
! CCTGCTTTCTAAAAACAAAG+AGG - chr1.2:51870944-51870963 MS.gene059009:CDS 35.0%
! CGAAAGTCGCTAGATTTTTA+TGG - chr1.2:51871720-51871739 MS.gene059009:intron 35.0%
! CTGTTTTGCACATGTGTATT+TGG - chr1.2:51870862-51870881 MS.gene059009:CDS 35.0%
! TATTGATTGCATATCCATGG+TGG + chr1.2:51872010-51872029 None:intergenic 35.0%
!! AGGTATTGATTGCATATCCA+TGG + chr1.2:51872013-51872032 None:intergenic 35.0%
!! ATCTTTAAGTATGGCTTGGT+GGG - chr1.2:51871152-51871171 MS.gene059009:CDS 35.0%
!! TATTTGGTATGGCCATTTTG+AGG - chr1.2:51870878-51870897 MS.gene059009:CDS 35.0%
!! TTTTAGAAAGCAGGAACTCT+TGG + chr1.2:51870938-51870957 None:intergenic 35.0%
!!! ACACACTCCGTTTTGTTTTT+TGG - chr1.2:51873890-51873909 MS.gene059009:CDS 35.0%
!!! AGTAATTTTGGGGTGTAACT+TGG - chr1.2:51872692-51872711 MS.gene059009:intron 35.0%
!!! CACACTCCGTTTTGTTTTTT+GGG - chr1.2:51873891-51873910 MS.gene059009:CDS 35.0%
!!! CCTCTTTGTTTTTAGAAAGC+AGG + chr1.2:51870947-51870966 None:intergenic 35.0%
ACCAAGTTTCACCAATGAAG+TGG - chr1.2:51870623-51870642 MS.gene059009:CDS 40.0%
ACTTATGGTGTATGTGAAGC+AGG - chr1.2:51873565-51873584 MS.gene059009:CDS 40.0%
AGTCATTGTGGCAATTACAG+TGG + chr1.2:51873473-51873492 None:intergenic 40.0%
CAATGTTAGTATTATGGGGG+AGG + chr1.2:51872953-51872972 None:intergenic 40.0%
CAGCTGAAGCTAAATGAAGA+GGG + chr1.2:51870665-51870684 None:intergenic 40.0%
CCAAGCCATACTTAAAGATG+AGG + chr1.2:51871151-51871170 None:intergenic 40.0%
CCTCATCTTTAAGTATGGCT+TGG - chr1.2:51871148-51871167 MS.gene059009:CDS 40.0%
CTAAATGGAGGGATGTGATT+TGG + chr1.2:51871312-51871331 None:intergenic 40.0%
CTCCCCCATAATACTAACAT+TGG - chr1.2:51872951-51872970 MS.gene059009:intron 40.0%
CTTTGCATTTAGCTGCGAAA+AGG - chr1.2:51870766-51870785 MS.gene059009:CDS 40.0%
GAACATATATGGAAGGATCG+AGG - chr1.2:51872743-51872762 MS.gene059009:intron 40.0%
GAGATGGTTGGGTATAAATG+TGG + chr1.2:51871574-51871593 None:intergenic 40.0%
GAGTAATTATGGCAACTCTG+AGG - chr1.2:51873012-51873031 MS.gene059009:intron 40.0%
GGACTCAATTGCACTACTTA+TGG - chr1.2:51873550-51873569 MS.gene059009:CDS 40.0%
GGCGTGGAATTCATATATAC+TGG + chr1.2:51873283-51873302 None:intergenic 40.0%
GGGGTGTAACTTGGATTATT+TGG - chr1.2:51872701-51872720 MS.gene059009:intron 40.0%
GTTGTGCTTCTCCTTATTAG+TGG - chr1.2:51873673-51873692 MS.gene059009:CDS 40.0%
TAAGGGGGAATCCACTAATA+AGG + chr1.2:51873687-51873706 None:intergenic 40.0%
TCAGCTGAAGCTAAATGAAG+AGG + chr1.2:51870666-51870685 None:intergenic 40.0%
TCCACTTCATTGGTGAAACT+TGG + chr1.2:51870627-51870646 None:intergenic 40.0%
TGGATTCCCCCTTAAGAATA+AGG - chr1.2:51873693-51873712 MS.gene059009:CDS 40.0%
TTCACAACGTGAATCGAATC+TGG + chr1.2:51870831-51870850 None:intergenic 40.0%
TTCTAAGTGTCCAAGAAGAG+AGG + chr1.2:51870577-51870596 None:intergenic 40.0%
TTGCATTTAGCTGCGAAAAG+GGG - chr1.2:51870768-51870787 MS.gene059009:CDS 40.0%
TTTCTTAAGATTTGCCTGGG+AGG + chr1.2:51871436-51871455 None:intergenic 40.0%
! AACTTGGATTATTTGGGGTG+TGG - chr1.2:51872708-51872727 MS.gene059009:intron 40.0%
! ACCAATGAAGTGGACTCAAA+AGG - chr1.2:51870633-51870652 MS.gene059009:CDS 40.0%
! ACTTGGATTATTTGGGGTGT+GGG - chr1.2:51872709-51872728 MS.gene059009:intron 40.0%
! CATCTTTAAGTATGGCTTGG+TGG - chr1.2:51871151-51871170 MS.gene059009:CDS 40.0%
! CTTCATTTAGCTTCAGCTGA+AGG - chr1.2:51870666-51870685 MS.gene059009:CDS 40.0%
! CTTTTCGCAGCTAAATGCAA+AGG + chr1.2:51870768-51870787 None:intergenic 40.0%
! GTGGTTTGTGGGTGAAAAAT+GGG + chr1.2:51871991-51872010 None:intergenic 40.0%
!! ACTCCTTTAAGGCCTCAAAA+TGG + chr1.2:51870893-51870912 None:intergenic 40.0%
!! CGAGACTTTTTCTACGCATA+CGG + chr1.2:51871406-51871425 None:intergenic 40.0%
!! GGCGTTTTGCTTTTAGTTGT+TGG - chr1.2:51873859-51873878 MS.gene059009:CDS 40.0%
!! TCCTTTTGAGTCCACTTCAT+TGG + chr1.2:51870637-51870656 None:intergenic 40.0%
!! TCTTTAAGTATGGCTTGGTG+GGG - chr1.2:51871153-51871172 MS.gene059009:CDS 40.0%
AGGGAGAGAGTGAAACTTTG+TGG + chr1.2:51870530-51870549 None:intergenic 45.0%
CAATCAACATTAAGTCCGCC+AGG - chr1.2:51873496-51873515 MS.gene059009:CDS 45.0%
CAGCAGCAATTGCTATGAAC+AGG - chr1.2:51873161-51873180 MS.gene059009:intron 45.0%
CTTTACGAATTCATGTGGCC+AGG + chr1.2:51873611-51873630 None:intergenic 45.0%
CTTTGTGATGCTGCATGTTG+CGG + chr1.2:51873304-51873323 None:intergenic 45.0%
GCAACAAGGAAGTGATGTAG+AGG - chr1.2:51872808-51872827 MS.gene059009:intron 45.0%
GCAATTGCTATGAACAGGTC+AGG - chr1.2:51873166-51873185 MS.gene059009:intron 45.0%
TGACATGAATGTGACAGCGA+CGG + chr1.2:51873749-51873768 None:intergenic 45.0%
TGCATATCCATGGTGGTTTG+TGG + chr1.2:51872003-51872022 None:intergenic 45.0%
TGCATTTAGCTGCGAAAAGG+GGG - chr1.2:51870769-51870788 MS.gene059009:CDS 45.0%
TGTGGGTGAAAAATGGGTGA+GGG + chr1.2:51871985-51872004 None:intergenic 45.0%
TTACCCGCGTGTTGTAACTT+GGG - chr1.2:51873837-51873856 MS.gene059009:CDS 45.0%
TTCTTAGTGACGCAGCAACA+AGG - chr1.2:51872794-51872813 MS.gene059009:intron 45.0%
TTGTGGGTGAAAAATGGGTG+AGG + chr1.2:51871986-51872005 None:intergenic 45.0%
! GCATATCCATGGTGGTTTGT+GGG + chr1.2:51872002-51872021 None:intergenic 45.0%
! GGTGGTTTGTGGGTGAAAAA+TGG + chr1.2:51871992-51872011 None:intergenic 45.0%
! TTTTCACCCACAAACCACCA+TGG - chr1.2:51871993-51872012 MS.gene059009:intron 45.0%
! TTTTCTTGCCAAACACCACC+TGG + chr1.2:51873517-51873536 None:intergenic 45.0%
!! AACAAGGGGAGCATTGATGT+TGG - chr1.2:51873444-51873463 MS.gene059009:CDS 45.0%
!!! CTGCAGTTTTAGCTTATGCC+TGG - chr1.2:51873590-51873609 MS.gene059009:CDS 45.0%
!!! TGGCCATTTTGAGGCCTTAA+AGG - chr1.2:51870887-51870906 MS.gene059009:CDS 45.0%
!!! AAATAGTTTATTTTAATTAA+AGG - chr1.2:51872662-51872681 MS.gene059009:intron 5.0%
!!! AATAGTTTATTTTAATTAAA+GGG - chr1.2:51872663-51872682 MS.gene059009:intron 5.0%
!!! GTAAAATTTTAAATAAATTT+GGG + chr1.2:51871897-51871916 None:intergenic 5.0%
!!! TGTAAAATTTTAAATAAATT+TGG + chr1.2:51871898-51871917 None:intergenic 5.0%
AAGAGGTGAGGTGAGATGGT+TGG + chr1.2:51871586-51871605 None:intergenic 50.0%
AGAGGTGAGGTGAGATGGTT+GGG + chr1.2:51871585-51871604 None:intergenic 50.0%
CAGGTCAGGCTTCACAACTT+TGG - chr1.2:51873180-51873199 MS.gene059009:intron 50.0%
GTCAGGCTTCACAACTTTGG+AGG - chr1.2:51873183-51873202 MS.gene059009:intron 50.0%
GTGGGGTGTGGGAGAATTTA+AGG - chr1.2:51871170-51871189 MS.gene059009:CDS 50.0%
GTTACCCGCGTGTTGTAACT+TGG - chr1.2:51873836-51873855 MS.gene059009:CDS 50.0%
GTTGAAGAGGTGAGGTGAGA+TGG + chr1.2:51871590-51871609 None:intergenic 50.0%
TACCCGCGTGTTGTAACTTG+GGG - chr1.2:51873838-51873857 MS.gene059009:CDS 50.0%
TCAACATTAAGTCCGCCAGG+TGG - chr1.2:51873499-51873518 MS.gene059009:CDS 50.0%
TTCAGCTGAAGGACACACTG+AGG - chr1.2:51870677-51870696 MS.gene059009:CDS 50.0%
! CTTTTTCTACGCATACGGCG+AGG + chr1.2:51871401-51871420 None:intergenic 50.0%
! GAGAAGCACAACACCAAGAG+AGG + chr1.2:51873665-51873684 None:intergenic 50.0%
!! AAGGGGAGCATTGATGTTGG+TGG - chr1.2:51873447-51873466 MS.gene059009:CDS 50.0%
!! CTTTGGAGGTGTTAGATCCC+TGG - chr1.2:51873197-51873216 MS.gene059009:intron 50.0%
ACGCCCCAAGTTACAACACG+CGG + chr1.2:51873844-51873863 None:intergenic 55.0%
ACTCACGTACGCGTTTGCTC+TGG - chr1.2:51873768-51873787 MS.gene059009:CDS 55.0%
AGCTGAAGGACACACTGAGG+TGG - chr1.2:51870680-51870699 MS.gene059009:CDS 55.0%
AGTCTCGTCTTCTTCCTCCC+AGG - chr1.2:51871419-51871438 MS.gene059009:intron 55.0%
CTCACGTACGCGTTTGCTCT+GGG - chr1.2:51873769-51873788 MS.gene059009:CDS 55.0%
TAAGTCCGCCAGGTGGTGTT+TGG - chr1.2:51873506-51873525 MS.gene059009:CDS 55.0%
TCTTGCCAAACACCACCTGG+CGG + chr1.2:51873514-51873533 None:intergenic 55.0%
! GTACGCGTTTGCTCTGGGTT+TGG - chr1.2:51873774-51873793 MS.gene059009:CDS 55.0%
!! AAGTATGGCTTGGTGGGGTG+TGG - chr1.2:51871158-51871177 MS.gene059009:CDS 55.0%
!! AGTATGGCTTGGTGGGGTGT+GGG - chr1.2:51871159-51871178 MS.gene059009:CDS 55.0%
CGCCCCAAGTTACAACACGC+GGG + chr1.2:51873843-51873862 None:intergenic 60.0%
GCTGCGAAAAGGGGGCGAAT+AGG - chr1.2:51870777-51870796 MS.gene059009:CDS 60.0%
TGATGCTGCATGTTGCGGCG+TGG + chr1.2:51873299-51873318 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 51870405 51873987 51870405 ID=MS.gene059009
chr1.2 mRNA 51870405 51873987 51870405 ID=MS.gene059009.t1;Parent=MS.gene059009
chr1.2 exon 51873382 51873987 51873382 ID=MS.gene059009.t1.exon1;Parent=MS.gene059009.t1
chr1.2 CDS 51873382 51873987 51873382 ID=cds.MS.gene059009.t1;Parent=MS.gene059009.t1
chr1.2 exon 51870405 51871268 51870405 ID=MS.gene059009.t1.exon2;Parent=MS.gene059009.t1
chr1.2 CDS 51870405 51871268 51870405 ID=cds.MS.gene059009.t1;Parent=MS.gene059009.t1
Gene Sequence

>MS.gene059009

ATGGAGACAAAAATAAATACCGCAAATCTAGAAGATGACACAATAAAAACACTCTACAATGCATCACTAAACGGTTGTGTAACTACTTTAAACACACTCATTCAAAACGACCCTCTTTTACTCCACAAAGTTTCACTCTCTCCCTATAATGAAACTCCATTACATATAGCCTCTCTTCTTGGACACTTAGAATTTTGTGAAATTCTTCTAAAAAACAAACCAAGTTTCACCAATGAAGTGGACTCAAAAGGACGTTGCCCTCTTCATTTAGCTTCAGCTGAAGGACACACTGAGGTGGTGAAAGCTCTTTTGATAGCAAATGAAGATGTTTGTTTGGTTTTTGACAAAGATGATATGATTCCTTTGCATTTAGCTGCGAAAAGGGGGCGAATAGGAGTAATTAAAGAGTTGATTAAAGCTAGACCAGATTCGATTCACGTTGTGAATGATGATGGTTCTGTTTTGCACATGTGTATTTGGTATGGCCATTTTGAGGCCTTAAAGGAGTTATTCAATTCAGTAAGAGGAGACCAAGAGTTCCTGCTTTCTAAAAACAAAGAGGGCAATACAATTCTGCACTTAGCAGTTAGACTCAAACAAATTAAGGTACTACTTAACAATTTTTAAAGTAATGTAATCCCCTTCTACAATGTCTTTTGTTTAGATTTAATTACACTTTAAATTTTCTGATTTAGATTAGTACGATTTTGGTTCCTTAGTTTTTCTTATTGTCACACTTAAGTCCTCATCTTTAAGTATGGCTTGGTGGGGTGTGGGAGAATTTAAGGAGTTGCGTAATAAGGAGATCAAGAGTTCGATCTTCACTCTCCGCATAATACTAACAATTAATAATAATACTAGGGGAGGGATATTTTGACTCCAAGAGTAATTCTTGTGAGTTACTCCAAATCACATCCCTCCATTTAGTTTTAATCCAACCATCCTAATTGATTATTAAATCATCTCTAATGATCAAGTAGTACTAAATCATTGCCTCGCCGTATGCGTAGAAAAAGTCTCGTCTTCTTCCTCCCAGGCAAATCTTAAGAAACAATGATTTGAATATGAATTAATTAAATTCATTGATCATTGATAAGTTCAGTTTTTTTCTGATAAATTTCACATCTTTGTTTTTATGCTGCGAAAATTATGAATTACAGTGTTTGCCACATTTATACCCAACCATCTCACCTCACCTCTTCAACTAGAATTTTGCATAATAATTTAAATTTGAGAATTCTATTTCTTCAAATTTGAGAATTCTATGTTATTCAAAGATAAGGAGGATAAAATTATTGGAATCTAAAAATAATGTCGAAAGTCGCTAGATTTTTATGGAGTCCAAATTCTTTGTGGGAATCAAAGGGCATAAAATAGAGATCATGTAGACATAGAAATGAAATCGAAAGCCAATTTTGTTCATGACTATTGTTAATCTTTGAGAACATATAGACTCTTTCTAGTCTCACCCCATATAATTTTAGTTACACCCAAATTTATTTAAAATTTTACAATAATACCAAAATTGTCCTCTTCATGTAAATTTCTAAAAACCCTTCTTTCATTATCATTCTAAACCCTCACCCATTTTTCACCCACAAACCACCATGGATATGCAATCAATACCTACTAAAATCGCCAATTAAATCAACATCTCTTCCATTGATACGTACTCGATTCATACAAGTAAGTGAATTTCATAAATTTCTTCGAGTTTCTATTTATCGTTTGCTCTATGATTTATTTGATGTTGTTAATTTTACCATGGGTGTTTATCGTTATTGTTAATTTCACGTTTGTCTGTCGATTTGTTTGATTTAATTTTACGTAGAAGGGTAACGTAATTTAAGTTTACATAGGTCTCACGTGAATTTAGTTTACGTACATATTCTAAAGAGGAATAACATACACGTAAACTCAGTTTACATGAACTTAAGTAAACTCAGTTTACATGAACTGTGTAAACTACGTTAGTTTACTTAACTTGTTGTAAACTTAGTTTACATAGTGTATGTAAACTTAGTTTACATAAACTACGTAAACTTAGTTTACATAAACTGTGTAAACTAAGTTTTCGTAGTGTATGTAAATTCAGTTTACATAAACTACGTAAACTCAGTTTACATAAACTGTGTAAAATCAGTTTACGTTAGTTTACTTAACTTATGTAAACTCAGTTTACATAAACTACGTAAACTTAGTTTACATAAACTGTGTAAACTCAGTTTACGTAGTGTATGTAAACTCAGTTTACATAAAATAGTTTATTTTAATTAAAGGGTATATTAGTAATTTTGGGGTGTAACTTGGATTATTTGGGGTGTGGGTAGTATATGTCGAACATATATGGAAGGATCGAGGAAAAAATACCCTAACAACGTATTCAGATTTCTTAGTGACGCAGCAACAAGGAAGTGATGTAGAGGATAATAGTGTGTGATCATGAAGATGATTTAATAATTAATTAAAGATCGTTGGATTAAAACAAAATAGAGGGATGTGATTTGGAGTAACTCAAAAGAGTTACTCTTGGAGTCAAAATATCCCTCCCCCATAATACTAACATTGGTCATTTCAAAACAAAAAAAAAAAATTGAGAAACTTAACGAGTAATTATGGCAACTCTGAGGTTTAAGTAATTCATTCTAGACAATAGACTCATTACTTATGGCGTGTGCTAGTGATTTTCTTTTCAATAACTTTGTTAATTTGTTTGCAGACCATAGAATACTTACTTTTGCAGCCTGAAATAAGAACAGCAGCAATTGCTATGAACAGGTCAGGCTTCACAACTTTGGAGGTGTTAGATCCCTGGTCAAGAGATTTTATAAGCCTTAAAATTGAAGAAATGTTAATTGAAGTCGGTGTTCTAAGACCAGTATATATGAATTCCACGCCGCAACATGCAGCATCACAAAGCATAGCCAATCAAGAACAACCAAATCAATCTTCTAATCAAGAACATCCAAATGAAAGAAGGAAAATGTGGGAAAAATTTTGGTCCAAGTATCTACAATTCCAAGGTAATTGGATAGAAGAAACAAGGGGAGCATTGATGTTGGTGGCCACTGTAATTGCCACAATGACTTTTCAATCAACATTAAGTCCGCCAGGTGGTGTTTGGCAAGAAAATACAAATACTGGAGGACTCAATTGCACTACTTATGGTGTATGTGAAGCAGGCACTGCAGTTTTAGCTTATGCCTGGCCACATGAATTCGTAAAGTTCATGACATACAACACCATTTCTTTCTTTTCCTCTCTTGGTGTTGTGCTTCTCCTTATTAGTGGATTCCCCCTTAAGAATAAGGTCATGATGTGGGTCTTGACATTCGCTATGACCGTCGCTGTCACATTCATGTCACTCACGTACGCGTTTGCTCTGGGTTTGGTCGCTCCTTATCATATTATTCAGCAAGTTTACAACATGCGTTACCCGCGTGTTGTAACTTGGGGCGTTTTGCTTTTAGTTGTTGGTTTGATTCACACACTCCGTTTTGTTTTTTGGGTCAACAAGATAACCAAATTCAAACTGCACAAGTTAAGACGTGTGTTTGCAAGAGCAAATTACTCGGATGTTTAG
Protein sequence

>MS.gene059009.t1

METKINTANLEDDTIKTLYNASLNGCVTTLNTLIQNDPLLLHKVSLSPYNETPLHIASLLGHLEFCEILLKNKPSFTNEVDSKGRCPLHLASAEGHTEVVKALLIANEDVCLVFDKDDMIPLHLAAKRGRIGVIKELIKARPDSIHVVNDDGSVLHMCIWYGHFEALKELFNSVRGDQEFLLSKNKEGNTILHLAVRLKQIKTIEYLLLQPEIRTAAIAMNRSGFTTLEVLDPWSRDFISLKIEEMLIEVGVLRPVYMNSTPQHAASQSIANQEQPNQSSNQEHPNERRKMWEKFWSKYLQFQGNWIEETRGALMLVATVIATMTFQSTLSPPGGVWQENTNTGGLNCTTYGVCEAGTAVLAYAWPHEFVKFMTYNTISFFSSLGVVLLLISGFPLKNKVMMWVLTFAMTVAVTFMSLTYAFALGLVAPYHIIQQVYNMRYPRVVTWGVLLLVVGLIHTLRFVFWVNKITKFKLHKLRRVFARANYSDV