Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059724.t1 | XP_013464589.1 | 88.8 | 340 | 28 | 4 | 1 | 335 | 1 | 335 | 5.80E-166 | 593.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059724.t1 | Q8L7M1 | 75.7 | 313 | 69 | 2 | 26 | 335 | 36 | 344 | 3.1e-136 | 486.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059724.t1 | A0A072V982 | 88.8 | 340 | 28 | 4 | 1 | 335 | 1 | 335 | 4.2e-166 | 593.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059724 | MS.gene060636 | 0.920071 | 2.03E-87 | -1.69E-46 |
| MS.gene059724 | MS.gene85150 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene059724 | MS.gene91342 | 0.804123 | 2.51E-49 | -1.69E-46 |
| MS.gene059724 | MS.gene93402 | 0.814452 | 1.53E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059724.t1 | MTR_2g078030 | 90.294 | 340 | 23 | 4 | 1 | 335 | 1 | 335 | 0.0 | 607 |
| MS.gene059724.t1 | MTR_2g078030 | 89.490 | 314 | 23 | 4 | 1 | 309 | 1 | 309 | 0.0 | 550 |
| MS.gene059724.t1 | MTR_8g463930 | 77.353 | 340 | 72 | 2 | 1 | 335 | 2 | 341 | 0.0 | 544 |
| MS.gene059724.t1 | MTR_4g013305 | 36.641 | 262 | 149 | 7 | 74 | 321 | 106 | 364 | 3.45e-51 | 174 |
| MS.gene059724.t1 | MTR_4g048320 | 35.496 | 262 | 152 | 7 | 74 | 321 | 77 | 335 | 5.16e-50 | 170 |
| MS.gene059724.t1 | MTR_4g035490 | 38.550 | 262 | 138 | 8 | 76 | 320 | 113 | 368 | 1.48e-49 | 170 |
| MS.gene059724.t1 | MTR_4g048320 | 35.496 | 262 | 152 | 7 | 74 | 321 | 135 | 393 | 2.64e-49 | 170 |
| MS.gene059724.t1 | MTR_3g073370 | 34.307 | 274 | 162 | 8 | 61 | 320 | 111 | 380 | 9.51e-48 | 166 |
| MS.gene059724.t1 | MTR_3g073370 | 34.307 | 274 | 162 | 8 | 61 | 320 | 112 | 381 | 1.06e-47 | 165 |
| MS.gene059724.t1 | MTR_2g088270 | 34.483 | 261 | 155 | 6 | 74 | 321 | 131 | 388 | 5.11e-45 | 158 |
| MS.gene059724.t1 | MTR_5g009700 | 33.043 | 230 | 143 | 6 | 76 | 298 | 27 | 252 | 6.95e-40 | 141 |
| MS.gene059724.t1 | MTR_5g009700 | 33.043 | 230 | 143 | 6 | 76 | 298 | 113 | 338 | 4.99e-39 | 141 |
| MS.gene059724.t1 | MTR_3g090600 | 32.114 | 246 | 153 | 6 | 69 | 309 | 106 | 342 | 2.86e-36 | 134 |
| MS.gene059724.t1 | MTR_3g090600 | 32.114 | 246 | 151 | 6 | 69 | 309 | 106 | 340 | 4.39e-36 | 133 |
| MS.gene059724.t1 | MTR_1g012800 | 35.622 | 233 | 134 | 9 | 72 | 297 | 115 | 338 | 3.04e-34 | 129 |
| MS.gene059724.t1 | MTR_3g090600 | 37.158 | 183 | 109 | 4 | 69 | 246 | 106 | 287 | 1.16e-27 | 110 |
| MS.gene059724.t1 | MTR_3g090600 | 37.158 | 183 | 107 | 4 | 69 | 246 | 106 | 285 | 1.71e-27 | 109 |
| MS.gene059724.t1 | MTR_5g041210 | 26.000 | 200 | 140 | 3 | 81 | 278 | 390 | 583 | 1.85e-12 | 68.6 |
| MS.gene059724.t1 | MTR_4g123090 | 24.710 | 259 | 180 | 6 | 74 | 325 | 391 | 641 | 5.25e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059724.t1 | AT1G53290 | 70.640 | 344 | 85 | 3 | 6 | 335 | 3 | 344 | 2.09e-178 | 498 |
| MS.gene059724.t1 | AT3G14960 | 70.760 | 342 | 88 | 4 | 2 | 335 | 5 | 342 | 4.14e-178 | 497 |
| MS.gene059724.t1 | AT2G26100 | 69.582 | 263 | 80 | 0 | 73 | 335 | 106 | 368 | 1.26e-139 | 400 |
| MS.gene059724.t1 | AT2G26100 | 71.130 | 239 | 69 | 0 | 73 | 311 | 106 | 344 | 1.82e-127 | 369 |
| MS.gene059724.t1 | AT1G11730 | 35.606 | 264 | 153 | 7 | 72 | 321 | 110 | 370 | 2.18e-49 | 169 |
| MS.gene059724.t1 | AT1G77810 | 35.496 | 262 | 154 | 7 | 74 | 322 | 115 | 374 | 2.85e-49 | 169 |
| MS.gene059724.t1 | AT1G77810 | 35.496 | 262 | 154 | 7 | 74 | 322 | 112 | 371 | 2.90e-49 | 169 |
| MS.gene059724.t1 | AT1G32930 | 36.900 | 271 | 150 | 8 | 69 | 321 | 118 | 385 | 6.13e-49 | 169 |
| MS.gene059724.t1 | AT1G33430 | 36.667 | 270 | 152 | 8 | 75 | 330 | 122 | 386 | 9.50e-49 | 168 |
| MS.gene059724.t1 | AT1G05170 | 34.601 | 263 | 155 | 7 | 73 | 321 | 134 | 393 | 1.45e-48 | 168 |
| MS.gene059724.t1 | AT1G22015 | 38.129 | 278 | 146 | 9 | 61 | 322 | 115 | 382 | 3.97e-47 | 164 |
| MS.gene059724.t1 | AT1G33430 | 35.740 | 277 | 153 | 9 | 75 | 330 | 122 | 394 | 2.69e-46 | 162 |
| MS.gene059724.t1 | AT4G26940 | 35.249 | 261 | 153 | 6 | 74 | 321 | 136 | 393 | 2.48e-45 | 159 |
| MS.gene059724.t1 | AT1G05170 | 36.036 | 222 | 135 | 4 | 73 | 289 | 134 | 353 | 9.60e-45 | 157 |
| MS.gene059724.t1 | AT2G32430 | 35.115 | 262 | 153 | 7 | 74 | 321 | 137 | 395 | 1.13e-44 | 158 |
| MS.gene059724.t1 | AT4G32120 | 34.981 | 263 | 152 | 9 | 45 | 296 | 82 | 336 | 3.14e-39 | 142 |
| MS.gene059724.t1 | AT5G53340 | 32.911 | 237 | 144 | 7 | 78 | 309 | 111 | 337 | 8.79e-37 | 135 |
| MS.gene059724.t1 | AT5G53340 | 32.489 | 237 | 146 | 6 | 78 | 309 | 111 | 338 | 1.12e-36 | 135 |
| MS.gene059724.t1 | AT1G33430 | 40.884 | 181 | 101 | 3 | 76 | 251 | 123 | 302 | 2.68e-35 | 130 |
| MS.gene059724.t1 | AT2G25300 | 36.564 | 227 | 129 | 8 | 76 | 295 | 40 | 258 | 4.13e-35 | 129 |
| MS.gene059724.t1 | AT2G25300 | 36.564 | 227 | 129 | 8 | 76 | 295 | 118 | 336 | 1.98e-34 | 129 |
| MS.gene059724.t1 | AT4G26940 | 40.278 | 144 | 83 | 2 | 74 | 215 | 136 | 278 | 1.72e-24 | 101 |
| MS.gene059724.t1 | AT1G27120 | 25.728 | 206 | 141 | 4 | 77 | 279 | 394 | 590 | 5.86e-13 | 70.1 |
| MS.gene059724.t1 | AT1G27120 | 25.728 | 206 | 141 | 4 | 77 | 279 | 425 | 621 | 6.75e-13 | 70.1 |
| MS.gene059724.t1 | AT1G26810 | 26.244 | 221 | 148 | 5 | 81 | 293 | 396 | 609 | 1.17e-12 | 69.3 |
| MS.gene059724.t1 | AT1G26810 | 26.244 | 221 | 148 | 5 | 81 | 293 | 396 | 609 | 1.17e-12 | 69.3 |
| MS.gene059724.t1 | AT5G62620 | 24.638 | 207 | 144 | 4 | 76 | 279 | 431 | 628 | 3.00e-12 | 68.2 |
| MS.gene059724.t1 | AT3G06440 | 25.941 | 239 | 149 | 7 | 76 | 300 | 341 | 565 | 1.23e-11 | 65.9 |
| MS.gene059724.t1 | AT3G06440 | 25.941 | 239 | 149 | 7 | 76 | 300 | 370 | 594 | 1.24e-11 | 66.2 |
Find 76 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGATGTCTGCGCTTAAA+AGG | 0.231312 | 2.4:+20554376 | MS.gene059724:CDS |
| CTAGATCCGTTCGCGTTGTT+TGG | 0.244084 | 2.4:+20553052 | MS.gene059724:CDS |
| CAAACAACGCGAACGGATCT+AGG | 0.247402 | 2.4:-20553051 | None:intergenic |
| CTGATGATGACATATATTTA+AGG | 0.264025 | 2.4:+20554607 | MS.gene059724:CDS |
| CCTATCGGCAACAACATTTC+TGG | 0.290197 | 2.4:-20553103 | None:intergenic |
| GTACATAGGATGCATGAAAA+AGG | 0.293304 | 2.4:+20554777 | MS.gene059724:CDS |
| TTTCCAAGCAAATTAGATAA+TGG | 0.334739 | 2.4:-20555404 | None:intergenic |
| CATCGACATCAATCGCTGTT+TGG | 0.338964 | 2.4:+20556449 | MS.gene059724:CDS |
| TACACTAACCATTTGAGTTT+CGG | 0.341334 | 2.4:-20554817 | None:intergenic |
| TAGATCCGTTCGCGTTGTTT+GGG | 0.344788 | 2.4:+20553053 | MS.gene059724:CDS |
| TATTCATCAGATTCCATTGT+TGG | 0.349171 | 2.4:-20557802 | None:intergenic |
| TGGGATATTCCAAAGTGTTC+AGG | 0.349634 | 2.4:+20556469 | MS.gene059724:CDS |
| TCATGCATCCTATGTACGTC+TGG | 0.353445 | 2.4:-20554771 | None:intergenic |
| ATATGACGATTTCATTCAAT+TGG | 0.361639 | 2.4:+20554410 | MS.gene059724:CDS |
| ATCAGCTTTGACATAAAATT+CGG | 0.372389 | 2.4:-20554589 | None:intergenic |
| TGGTTTCCTTCCGATCCTAA+TGG | 0.377181 | 2.4:+20553201 | MS.gene059724:CDS |
| ATCGACATCAATCGCTGTTT+GGG | 0.381526 | 2.4:+20556450 | MS.gene059724:CDS |
| TGCCGATAGGCATAAGGTTA+TGG | 0.390206 | 2.4:+20553116 | MS.gene059724:CDS |
| GCATTTGTCGGTATTCAGAC+TGG | 0.399480 | 2.4:+20553138 | MS.gene059724:CDS |
| TGTCAAGCTTGGTCGCTCTT+AGG | 0.399911 | 2.4:+20555480 | MS.gene059724:CDS |
| GAATGCAGCTGTCCATTTGA+TGG | 0.400266 | 2.4:-20557774 | None:intergenic |
| TAGTACCGTTGAAGTCCATT+AGG | 0.400530 | 2.4:-20553216 | None:intergenic |
| AGTTTCGGATCAGTGAAAAC+AGG | 0.412422 | 2.4:-20554802 | None:intergenic |
| ATTGATGTCGATGTACATTC+TGG | 0.423236 | 2.4:-20556439 | None:intergenic |
| AGCAATGAGGATGTTACAAT+TGG | 0.423646 | 2.4:+20556361 | MS.gene059724:CDS |
| TTGGAAGGCGTGAATCTTTG+AGG | 0.424287 | 2.4:+20553172 | MS.gene059724:CDS |
| TGCTGATGTTGTGTCAAGCT+TGG | 0.426295 | 2.4:+20555469 | MS.gene059724:CDS |
| TGGTCGCTCTTAGGAATAAC+AGG | 0.428844 | 2.4:+20555489 | MS.gene059724:CDS |
| GAGCCATTATCTAATTTGCT+TGG | 0.431342 | 2.4:+20555401 | MS.gene059724:CDS |
| GTTCGCGTTGTTTGGGATCA+CGG | 0.448653 | 2.4:+20553060 | MS.gene059724:CDS |
| CATAAGGTTATGGCATTTGT+CGG | 0.466732 | 2.4:+20553126 | MS.gene059724:CDS |
| TGTTGTTGCCGATAGGCATA+AGG | 0.472626 | 2.4:+20553110 | MS.gene059724:CDS |
| TCAGCAGAAAGAGCATATAT+AGG | 0.474635 | 2.4:-20555452 | None:intergenic |
| AATGTTGGAACTCCATCAAA+TGG | 0.475957 | 2.4:+20557762 | MS.gene059724:CDS |
| TCCAGCTTGGAAGAAGCTAC+TGG | 0.476169 | 2.4:+20554312 | MS.gene059724:intron |
| CGATGAGGAGTAAAAGGAGG+AGG | 0.476875 | 2.4:-20552984 | None:intergenic |
| ATTTCTGGCGCCGTTGGTGA+CGG | 0.479564 | 2.4:-20553088 | None:intergenic |
| TCACTGATCCGAAACTCAAA+TGG | 0.480790 | 2.4:+20554809 | MS.gene059724:CDS |
| ATTATCTAATTTGCTTGGAA+AGG | 0.483371 | 2.4:+20555406 | MS.gene059724:CDS |
| CAGACTGGGTTTAGATCTGT+TGG | 0.492313 | 2.4:+20553153 | MS.gene059724:CDS |
| GTGTGACGTGGGTTGAAGAA+TGG | 0.496529 | 2.4:-20552928 | None:intergenic |
| ACGTGGGTTGAAGAATGGTT+TGG | 0.507473 | 2.4:-20552923 | None:intergenic |
| AACAACATTTCTGGCGCCGT+TGG | 0.510437 | 2.4:-20553094 | None:intergenic |
| GAAGATGTCTGCGCTTAAAA+GGG | 0.512202 | 2.4:+20554377 | MS.gene059724:CDS |
| GAGGAGTAAAAGGAGGAGGA+AGG | 0.516677 | 2.4:-20552980 | None:intergenic |
| CATTTGTCGGTATTCAGACT+GGG | 0.517713 | 2.4:+20553139 | MS.gene059724:CDS |
| ACATACAAACCTGAACACTT+TGG | 0.519604 | 2.4:-20556478 | None:intergenic |
| AAACAACGCGAACGGATCTA+GGG | 0.523178 | 2.4:-20553050 | None:intergenic |
| TGGGTTGAAGAATGGTTTGG+AGG | 0.524516 | 2.4:-20552920 | None:intergenic |
| GTGAATCTTTGAGGAAGACT+TGG | 0.526407 | 2.4:+20553181 | MS.gene059724:CDS |
| CTTGGAAGAAGCTACTGGAT+TGG | 0.527346 | 2.4:+20554317 | MS.gene059724:CDS |
| CGAAGGGGAATGGTGTGACG+TGG | 0.533817 | 2.4:-20552940 | None:intergenic |
| TCTCATTCCCAGACGTACAT+AGG | 0.534214 | 2.4:+20554763 | MS.gene059724:CDS |
| CACGGCAACGCCGTCACCAA+CGG | 0.537116 | 2.4:+20553078 | MS.gene059724:CDS |
| CATGCATCCTATGTACGTCT+GGG | 0.539002 | 2.4:-20554770 | None:intergenic |
| AAAGTTCATGAATATTCTCA+TGG | 0.542243 | 2.4:-20556411 | None:intergenic |
| TGCCATAACCTTATGCCTAT+CGG | 0.542296 | 2.4:-20553118 | None:intergenic |
| GATGACATATATTTAAGGCC+AGG | 0.545400 | 2.4:+20554612 | MS.gene059724:CDS |
| CATTCAATTGGATATTGAAG+AGG | 0.553721 | 2.4:+20554422 | MS.gene059724:CDS |
| TGAGAATCTGCGAAGGGGAA+TGG | 0.555674 | 2.4:-20552950 | None:intergenic |
| TAATCCAGAAAAGAGAATGT+TGG | 0.561149 | 2.4:+20557747 | MS.gene059724:CDS |
| AGGATGTTACAATTGGAGCT+TGG | 0.574710 | 2.4:+20556368 | MS.gene059724:CDS |
| AAACGATGAGGAGTAAAAGG+AGG | 0.582478 | 2.4:-20552987 | None:intergenic |
| CCAGAAATGTTGTTGCCGAT+AGG | 0.597294 | 2.4:+20553103 | MS.gene059724:CDS |
| TGATGAATGAGAATCTGCGA+AGG | 0.601088 | 2.4:-20552957 | None:intergenic |
| TGAAGTCCATTAGGATCGGA+AGG | 0.604237 | 2.4:-20553207 | None:intergenic |
| GGTTTGGAGGAAAATGAAGA+AGG | 0.606976 | 2.4:-20552907 | None:intergenic |
| CTGGGTTTAGATCTGTTGGA+AGG | 0.609512 | 2.4:+20553157 | MS.gene059724:CDS |
| CCGTTGAAGTCCATTAGGAT+CGG | 0.614621 | 2.4:-20553211 | None:intergenic |
| GATGAATGAGAATCTGCGAA+GGG | 0.618098 | 2.4:-20552956 | None:intergenic |
| CCGATCCTAATGGACTTCAA+CGG | 0.632210 | 2.4:+20553211 | MS.gene059724:CDS |
| CTGCATTCAGAGTCCAACAA+TGG | 0.632354 | 2.4:+20557789 | MS.gene059724:CDS |
| GTGATCCCAAACAACGCGAA+CGG | 0.639513 | 2.4:-20553058 | None:intergenic |
| GTTTCGGATCAGTGAAAACA+GGG | 0.647891 | 2.4:-20554801 | None:intergenic |
| GAAGGGGAATGGTGTGACGT+GGG | 0.674684 | 2.4:-20552939 | None:intergenic |
| ATGAATGAGAATCTGCGAAG+GGG | 0.679781 | 2.4:-20552955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAAAATATATATATAG+AGG | + | chr2.4:20556514-20556533 | MS.gene059724:intron | 10.0% |
| !!! | AAAATAACATTAAATTGTTT+TGG | + | chr2.4:20553716-20553735 | MS.gene059724:intron | 10.0% |
| !!! | AATTTATGAATCTTTAATTT+GGG | + | chr2.4:20555039-20555058 | MS.gene059724:intron | 10.0% |
| !!! | TATATATTTTTAACATTTTG+TGG | - | chr2.4:20556509-20556528 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTGCTAATATTA+TGG | - | chr2.4:20556217-20556236 | None:intergenic | 10.0% |
| !! | AAAAATATATATATAGAGGA+TGG | + | chr2.4:20556518-20556537 | MS.gene059724:intron | 15.0% |
| !! | AATAATTGAAAGAATTACAT+AGG | - | chr2.4:20556866-20556885 | None:intergenic | 15.0% |
| !! | ATGTAATTTCCAATATTTAT+GGG | + | chr2.4:20555223-20555242 | MS.gene059724:intron | 15.0% |
| !! | GAATTTATGAATCTTTAATT+TGG | + | chr2.4:20555038-20555057 | MS.gene059724:intron | 15.0% |
| !! | TAATTCTTTCAATTATTTAC+TGG | + | chr2.4:20556869-20556888 | MS.gene059724:intron | 15.0% |
| !! | TTAGATTAAAACAAAATAGA+TGG | - | chr2.4:20556591-20556610 | None:intergenic | 15.0% |
| !!! | ACTGTGTTTTAAAAAATAAA+AGG | - | chr2.4:20556329-20556348 | None:intergenic | 15.0% |
| !!! | ATTTTTTAAAACACAGTTTT+CGG | + | chr2.4:20556332-20556351 | MS.gene059724:intron | 15.0% |
| !!! | TCTATTTTGTTTTAATCTAA+CGG | + | chr2.4:20556591-20556610 | MS.gene059724:intron | 15.0% |
| !! | AAAAAGAAACTGAGAATTAA+CGG | + | chr2.4:20555795-20555814 | MS.gene059724:intron | 20.0% |
| !! | AAAATATGGTCATTTATTAC+AGG | + | chr2.4:20554529-20554548 | MS.gene059724:intron | 20.0% |
| !! | AACTTCATAACTATTCTTTA+AGG | - | chr2.4:20556132-20556151 | None:intergenic | 20.0% |
| !! | AAGTATGATATTGTATGAAT+TGG | - | chr2.4:20556105-20556124 | None:intergenic | 20.0% |
| !! | AATAGGAATAAATCAATATG+AGG | - | chr2.4:20554289-20554308 | None:intergenic | 20.0% |
| !! | CATGTAATTTCCAATATTTA+TGG | + | chr2.4:20555222-20555241 | MS.gene059724:intron | 20.0% |
| !! | GTAATAACAACATTAAAACT+AGG | - | chr2.4:20554660-20554679 | None:intergenic | 20.0% |
| !! | TGTAATTTCCAATATTTATG+GGG | + | chr2.4:20555224-20555243 | MS.gene059724:intron | 20.0% |
| !! | TTGCAAAAATTCTGATTATT+TGG | - | chr2.4:20554698-20554717 | None:intergenic | 20.0% |
| !!! | AATCAGCATTTAATGATTTT+TGG | + | chr2.4:20557632-20557651 | MS.gene059724:intron | 20.0% |
| !!! | GTTTTACTTATCATTTTACT+TGG | + | chr2.4:20554164-20554183 | MS.gene059724:intron | 20.0% |
| !!! | TTGTTTTTATTGTAGTATTG+AGG | + | chr2.4:20553596-20553615 | MS.gene059724:intron | 20.0% |
| ! | AAAGAACTGGATAATTACAT+AGG | - | chr2.4:20556927-20556946 | None:intergenic | 25.0% |
| ! | AAAGTTCATGAATATTCTCA+TGG | - | chr2.4:20556414-20556433 | None:intergenic | 25.0% |
| ! | AACTTTACATTCACAAGTAT+AGG | - | chr2.4:20556301-20556320 | None:intergenic | 25.0% |
| ! | AATGCTATAAGCTACAAAAT+AGG | - | chr2.4:20553654-20553673 | None:intergenic | 25.0% |
| ! | ACATGTATAAGGAAGATTTA+TGG | + | chr2.4:20553348-20553367 | MS.gene059724:intron | 25.0% |
| ! | AGAAACTATTAGGAAAGATT+TGG | + | chr2.4:20553438-20553457 | MS.gene059724:intron | 25.0% |
| ! | AGATTTGGAAATTAATGAGT+TGG | + | chr2.4:20553453-20553472 | MS.gene059724:intron | 25.0% |
| ! | AGGTGAATATTATCAATTTC+TGG | - | chr2.4:20557410-20557429 | None:intergenic | 25.0% |
| ! | ATATATGTAGCATGCAAATA+AGG | - | chr2.4:20555578-20555597 | None:intergenic | 25.0% |
| ! | ATATGACGATTTCATTCAAT+TGG | + | chr2.4:20554410-20554429 | MS.gene059724:CDS | 25.0% |
| ! | ATGTGATATTGTTTAATGAC+AGG | + | chr2.4:20554118-20554137 | MS.gene059724:intron | 25.0% |
| ! | CAAATAAGTCAATCCAAATA+GGG | + | chr2.4:20553871-20553890 | MS.gene059724:intron | 25.0% |
| ! | GATTTATGGATTCTGTAATA+AGG | + | chr2.4:20553362-20553381 | MS.gene059724:intron | 25.0% |
| ! | GGAGAATTACATAAGAAAAT+CGG | - | chr2.4:20557531-20557550 | None:intergenic | 25.0% |
| ! | TAACTATCAGAGAAACTATT+AGG | + | chr2.4:20553428-20553447 | MS.gene059724:intron | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+AGG | + | chr2.4:20553870-20553889 | MS.gene059724:intron | 25.0% |
| ! | TTAAAAAAGAAGCTTAGAGT+TGG | - | chr2.4:20556811-20556830 | None:intergenic | 25.0% |
| ! | TTCTATCATACACCATATTT+CGG | - | chr2.4:20553480-20553499 | None:intergenic | 25.0% |
| ! | TTTCCAAGCAAATTAGATAA+TGG | - | chr2.4:20555407-20555426 | None:intergenic | 25.0% |
| !! | ATCAGCTTTGACATAAAATT+CGG | - | chr2.4:20554592-20554611 | None:intergenic | 25.0% |
| !! | ATTTAGAACCCCATAAATAT+TGG | - | chr2.4:20555235-20555254 | None:intergenic | 25.0% |
| !! | ATTTGATGTACTTTTGTTAC+CGG | + | chr2.4:20554226-20554245 | MS.gene059724:intron | 25.0% |
| !! | CTGATGATGACATATATTTA+AGG | + | chr2.4:20554607-20554626 | MS.gene059724:CDS | 25.0% |
| !! | GTGTTTCTAAGCTAAAAATA+TGG | + | chr2.4:20554515-20554534 | MS.gene059724:intron | 25.0% |
| !! | TAAATGCAAATCGTTTTCAA+TGG | + | chr2.4:20554142-20554161 | MS.gene059724:intron | 25.0% |
| !! | TATGATAGGCATAAAGTATT+TGG | + | chr2.4:20554906-20554925 | MS.gene059724:intron | 25.0% |
| !! | TTTCAACTTAACATTTGTTG+AGG | + | chr2.4:20557483-20557502 | MS.gene059724:intron | 25.0% |
| !!! | AACTTCTTATTTTGCTATCT+TGG | + | chr2.4:20556989-20557008 | MS.gene059724:intron | 25.0% |
| !!! | AATGTCGATGTTTTGATTTT+AGG | + | chr2.4:20553559-20553578 | MS.gene059724:intron | 25.0% |
| !!! | ATTATCTAATTTGCTTGGAA+AGG | + | chr2.4:20555406-20555425 | MS.gene059724:CDS | 25.0% |
| !!! | CTTTTTTCTGAATGATGATT+TGG | + | chr2.4:20557700-20557719 | MS.gene059724:intron | 25.0% |
| !!! | GTATTTTGAGATAAAAGCAA+CGG | + | chr2.4:20557132-20557151 | MS.gene059724:intron | 25.0% |
| !!! | TACTAATCTCTTTTTTGTTG+AGG | + | chr2.4:20553234-20553253 | MS.gene059724:intron | 25.0% |
| !!! | TTTCTCTGATAGTTATTTCT+TGG | - | chr2.4:20553423-20553442 | None:intergenic | 25.0% |
| AAAATCCAAAAGTGAGATAG+TGG | - | chr2.4:20555607-20555626 | None:intergenic | 30.0% | |
| AAACGTCTCAACATAAACTA+GGG | + | chr2.4:20555192-20555211 | MS.gene059724:intron | 30.0% | |
| AACAATGGAATCTGATGAAT+AGG | + | chr2.4:20557804-20557823 | MS.gene059724:CDS | 30.0% | |
| AAGATTGGATTCATTAAGGT+AGG | + | chr2.4:20557201-20557220 | MS.gene059724:intron | 30.0% | |
| AATCAAAACCGACTAACATA+AGG | - | chr2.4:20554020-20554039 | None:intergenic | 30.0% | |
| AATTGTTCTGTAAAGATCCA+AGG | + | chr2.4:20556692-20556711 | MS.gene059724:intron | 30.0% | |
| ACAAGTATAGGAATATGGAA+GGG | - | chr2.4:20556289-20556308 | None:intergenic | 30.0% | |
| ACTATATAAACCAAAGCAGA+TGG | - | chr2.4:20555712-20555731 | None:intergenic | 30.0% | |
| AGAAAACGAAAGAAACAAGA+TGG | - | chr2.4:20555149-20555168 | None:intergenic | 30.0% | |
| ATAAATCAAGAAACCTTGTG+TGG | - | chr2.4:20557093-20557112 | None:intergenic | 30.0% | |
| ATAAGGAGAGATAGATCAAA+TGG | + | chr2.4:20553379-20553398 | MS.gene059724:intron | 30.0% | |
| ATCTTTGTCAGAATTGTGTT+TGG | + | chr2.4:20555670-20555689 | MS.gene059724:intron | 30.0% | |
| ATCTTTGTTCCTTTGTGAAA+AGG | - | chr2.4:20556188-20556207 | None:intergenic | 30.0% | |
| ATGCCTATCATAAAGTGAAA+TGG | - | chr2.4:20554898-20554917 | None:intergenic | 30.0% | |
| ATTCTCCAATTCTATTGCAT+TGG | + | chr2.4:20557544-20557563 | MS.gene059724:intron | 30.0% | |
| CAAGTTGTAGACAAAGAAAA+GGG | - | chr2.4:20555517-20555536 | None:intergenic | 30.0% | |
| CATTCAATTGGATATTGAAG+AGG | + | chr2.4:20554422-20554441 | MS.gene059724:CDS | 30.0% | |
| CATTCACAAGTATAGGAATA+TGG | - | chr2.4:20556294-20556313 | None:intergenic | 30.0% | |
| CTTGAAGATTGGATTCATTA+AGG | + | chr2.4:20557197-20557216 | MS.gene059724:intron | 30.0% | |
| GAAAACGAAAGAAACAAGAT+GGG | - | chr2.4:20555148-20555167 | None:intergenic | 30.0% | |
| GAAACTGAGAAAAGATAAAG+AGG | + | chr2.4:20555750-20555769 | MS.gene059724:intron | 30.0% | |
| GTGTTGTGTATTACAAGAAT+TGG | + | chr2.4:20553902-20553921 | MS.gene059724:intron | 30.0% | |
| TAAATCTCCAAGCAATTGAA+TGG | - | chr2.4:20556047-20556066 | None:intergenic | 30.0% | |
| TAAGTCTATAGACTTACTCT+TGG | - | chr2.4:20556555-20556574 | None:intergenic | 30.0% | |
| TAATCCAGAAAAGAGAATGT+TGG | + | chr2.4:20557747-20557766 | MS.gene059724:CDS | 30.0% | |
| TACATAGGATGCATGAAAAA+GGG | + | chr2.4:20554778-20554797 | MS.gene059724:CDS | 30.0% | |
| TACTTTGCATAGGTAATGAA+TGG | - | chr2.4:20553960-20553979 | None:intergenic | 30.0% | |
| TAGGAAAACAAAAACATACG+TGG | + | chr2.4:20557220-20557239 | MS.gene059724:intron | 30.0% | |
| TATGGTCATTTATTACAGGT+TGG | + | chr2.4:20554533-20554552 | MS.gene059724:intron | 30.0% | |
| TATTCATCAGATTCCATTGT+TGG | - | chr2.4:20557805-20557824 | None:intergenic | 30.0% | |
| TGAATAACATAAGAGAGAGA+TGG | - | chr2.4:20557588-20557607 | None:intergenic | 30.0% | |
| TGCCTATCATAAAGTGAAAT+GGG | - | chr2.4:20554897-20554916 | None:intergenic | 30.0% | |
| TGGTGTATGATAGAACATTA+TGG | + | chr2.4:20553485-20553504 | MS.gene059724:intron | 30.0% | |
| TGTAATACACAACACAACTT+AGG | - | chr2.4:20553897-20553916 | None:intergenic | 30.0% | |
| ! | AATGATTTTCATTCCCTTTG+AGG | - | chr2.4:20555107-20555126 | None:intergenic | 30.0% |
| ! | GAGTATTTTCTTCATGCTTA+TGG | + | chr2.4:20555428-20555447 | MS.gene059724:CDS | 30.0% |
| ! | GTTTTTGAATTTCTACCTTG+AGG | + | chr2.4:20557049-20557068 | MS.gene059724:intron | 30.0% |
| ! | TACACTAACCATTTGAGTTT+CGG | - | chr2.4:20554820-20554839 | None:intergenic | 30.0% |
| ! | TCATTTTACAACCAGCATAT+TGG | + | chr2.4:20555332-20555351 | MS.gene059724:intron | 30.0% |
| ! | TTGATTTGAAGTCTCATGTT+TGG | + | chr2.4:20553620-20553639 | MS.gene059724:intron | 30.0% |
| ! | TTTCTGAATGATGATTTGGA+TGG | + | chr2.4:20557704-20557723 | MS.gene059724:intron | 30.0% |
| ! | TTTTTCCACTATCTCACTTT+TGG | + | chr2.4:20555599-20555618 | MS.gene059724:intron | 30.0% |
| !! | ATTTTCATTTTGACGAATCG+CGG | - | chr2.4:20557374-20557393 | None:intergenic | 30.0% |
| !!! | AGTCGGTTTTGATTGATTTT+GGG | + | chr2.4:20554026-20554045 | MS.gene059724:intron | 30.0% |
| !!! | ATTGTTATCTGCCTCTTTTT+TGG | + | chr2.4:20555253-20555272 | MS.gene059724:intron | 30.0% |
| !!! | TAGTCGGTTTTGATTGATTT+TGG | + | chr2.4:20554025-20554044 | MS.gene059724:intron | 30.0% |
| !!! | TTGGCTTTTAGGTTTGTTAT+TGG | + | chr2.4:20554336-20554355 | MS.gene059724:CDS | 30.0% |
| !!! | TTGTTATCTGCCTCTTTTTT+GGG | + | chr2.4:20555254-20555273 | MS.gene059724:intron | 30.0% |
| !!! | TTGTTTTTGCCTTTTCACAA+AGG | + | chr2.4:20556176-20556195 | MS.gene059724:intron | 30.0% |
| AAAAAGAAGCTTAGAGTTGG+AGG | - | chr2.4:20556808-20556827 | None:intergenic | 35.0% | |
| AAATGAGCCATTCAATTGCT+TGG | + | chr2.4:20556037-20556056 | MS.gene059724:intron | 35.0% | |
| AACGTCTCAACATAAACTAG+GGG | + | chr2.4:20555193-20555212 | MS.gene059724:intron | 35.0% | |
| AATGTTGGAACTCCATCAAA+TGG | + | chr2.4:20557762-20557781 | MS.gene059724:CDS | 35.0% | |
| ACACAATTCTGACAAAGATG+TGG | - | chr2.4:20555669-20555688 | None:intergenic | 35.0% | |
| ACATACAAACCTGAACACTT+TGG | - | chr2.4:20556481-20556500 | None:intergenic | 35.0% | |
| ACGGTTTAAGAAAAACGATG+AGG | - | chr2.4:20553002-20553021 | None:intergenic | 35.0% | |
| AGATAGATCAAATGGAGGAT+AGG | + | chr2.4:20553387-20553406 | MS.gene059724:intron | 35.0% | |
| AGCAATGAGGATGTTACAAT+TGG | + | chr2.4:20556361-20556380 | MS.gene059724:CDS | 35.0% | |
| ATCAATGCGAAAACAAGCTT+AGG | + | chr2.4:20553317-20553336 | MS.gene059724:intron | 35.0% | |
| ATCTTTAATTGTGTCCTTCC+TGG | + | chr2.4:20554843-20554862 | MS.gene059724:intron | 35.0% | |
| ATTGATGTCGATGTACATTC+TGG | - | chr2.4:20556442-20556461 | None:intergenic | 35.0% | |
| CAAACGTCTCAACATAAACT+AGG | + | chr2.4:20555191-20555210 | MS.gene059724:intron | 35.0% | |
| CACAAGTATAGGAATATGGA+AGG | - | chr2.4:20556290-20556309 | None:intergenic | 35.0% | |
| CACCCATTTCACTTTATGAT+AGG | + | chr2.4:20554892-20554911 | MS.gene059724:intron | 35.0% | |
| CATAAGGTTATGGCATTTGT+CGG | + | chr2.4:20553126-20553145 | MS.gene059724:CDS | 35.0% | |
| CCAAAAACAAGACCACAAAA+GGG | - | chr2.4:20553934-20553953 | None:intergenic | 35.0% | |
| CTAGTTTATGTTGAGACGTT+TGG | - | chr2.4:20555193-20555212 | None:intergenic | 35.0% | |
| CTTGATTTATGTGTGACAGA+GGG | + | chr2.4:20557103-20557122 | MS.gene059724:intron | 35.0% | |
| GAAAAACGATGAGGAGTAAA+AGG | - | chr2.4:20552993-20553012 | None:intergenic | 35.0% | |
| GAAAACAAGCTTAGGTGATT+TGG | + | chr2.4:20553325-20553344 | MS.gene059724:intron | 35.0% | |
| GAACTGGATAATTACATAGG+TGG | - | chr2.4:20556924-20556943 | None:intergenic | 35.0% | |
| GCAAGTTGTAGACAAAGAAA+AGG | - | chr2.4:20555518-20555537 | None:intergenic | 35.0% | |
| GCATTATGCCTTATGTTAGT+CGG | + | chr2.4:20554009-20554028 | MS.gene059724:intron | 35.0% | |
| GGGTGAAAATTGAAAAGTTC+CGG | - | chr2.4:20554877-20554896 | None:intergenic | 35.0% | |
| GTACATAGGATGCATGAAAA+AGG | + | chr2.4:20554777-20554796 | MS.gene059724:CDS | 35.0% | |
| GTTCTCCAATGCAATAGAAT+TGG | - | chr2.4:20557552-20557571 | None:intergenic | 35.0% | |
| GTTGTTCAATGCAAAAGAAC+TGG | - | chr2.4:20556940-20556959 | None:intergenic | 35.0% | |
| TAGATCGTAAAAAACTGCCT+TGG | - | chr2.4:20556712-20556731 | None:intergenic | 35.0% | |
| TCAATTGCTTGGAGATTTAG+TGG | + | chr2.4:20556048-20556067 | MS.gene059724:intron | 35.0% | |
| TCCAAAAACAAGACCACAAA+AGG | - | chr2.4:20553935-20553954 | None:intergenic | 35.0% | |
| TCTTGATTTATGTGTGACAG+AGG | + | chr2.4:20557102-20557121 | MS.gene059724:intron | 35.0% | |
| TTGATTTATGTGTGACAGAG+GGG | + | chr2.4:20557104-20557123 | MS.gene059724:intron | 35.0% | |
| TTGTCAGAATTGTGTTTGGT+TGG | + | chr2.4:20555674-20555693 | MS.gene059724:intron | 35.0% | |
| ! | AGGTGATTTGGACATGTATA+AGG | + | chr2.4:20553337-20553356 | MS.gene059724:intron | 35.0% |
| ! | AGTTCCAACATTCTCTTTTC+TGG | - | chr2.4:20557754-20557773 | None:intergenic | 35.0% |
| ! | GATGACATATATTTAAGGCC+AGG | + | chr2.4:20554612-20554631 | MS.gene059724:CDS | 35.0% |
| ! | TAATGAGTTGGACCGAAATA+TGG | + | chr2.4:20553465-20553484 | MS.gene059724:intron | 35.0% |
| ! | TCAGAACACACGTTTTGTAT+GGG | - | chr2.4:20554461-20554480 | None:intergenic | 35.0% |
| ! | TCAGCAGAAAGAGCATATAT+AGG | - | chr2.4:20555455-20555474 | None:intergenic | 35.0% |
| ! | TTTTCATTGTCGCTATAGAG+AGG | - | chr2.4:20555301-20555320 | None:intergenic | 35.0% |
| ! | TTTTGTTACCGGTGCAATTT+GGG | + | chr2.4:20554237-20554256 | MS.gene059724:intron | 35.0% |
| !! | GAGCCATTATCTAATTTGCT+TGG | + | chr2.4:20555401-20555420 | MS.gene059724:CDS | 35.0% |
| !!! | AGACAGCGATTGTTTTGAAA+CGG | - | chr2.4:20553021-20553040 | None:intergenic | 35.0% |
| !!! | ATATTGGCTTCTTTGGCTTT+TGG | + | chr2.4:20555348-20555367 | MS.gene059724:intron | 35.0% |
| !!! | CGCTGAATTTTTTGATCTGA+AGG | - | chr2.4:20556737-20556756 | None:intergenic | 35.0% |
| !!! | GGCTTTTGGAGTAATTTTAC+CGG | + | chr2.4:20555362-20555381 | MS.gene059724:intron | 35.0% |
| !!! | TGTTATCTGCCTCTTTTTTG+GGG | + | chr2.4:20555255-20555274 | MS.gene059724:intron | 35.0% |
| AAACGATGAGGAGTAAAAGG+AGG | - | chr2.4:20552990-20553009 | None:intergenic | 40.0% | |
| AAAGAAATCTGCTCAGTGCA+TGG | - | chr2.4:20556074-20556093 | None:intergenic | 40.0% | |
| AAAGTTCCGGAAATTAAGCC+AGG | - | chr2.4:20554864-20554883 | None:intergenic | 40.0% | |
| AACACAACTTAGGCCCTATT+TGG | - | chr2.4:20553887-20553906 | None:intergenic | 40.0% | |
| AATCAAGAAACCTTGTGTGG+TGG | - | chr2.4:20557090-20557109 | None:intergenic | 40.0% | |
| ACTACATGACCCCAAAAAAG+AGG | - | chr2.4:20555267-20555286 | None:intergenic | 40.0% | |
| ACTCGGTAATGCTTGAAGAT+TGG | + | chr2.4:20557186-20557205 | MS.gene059724:intron | 40.0% | |
| AGAAGTTCAAAGCTGAGAGA+TGG | - | chr2.4:20556976-20556995 | None:intergenic | 40.0% | |
| AGGAGAGATAGATCAAATGG+AGG | + | chr2.4:20553382-20553401 | MS.gene059724:intron | 40.0% | |
| AGGATGTTACAATTGGAGCT+TGG | + | chr2.4:20556368-20556387 | MS.gene059724:CDS | 40.0% | |
| AGGGAAGATTGAAATCCTCA+AGG | - | chr2.4:20557067-20557086 | None:intergenic | 40.0% | |
| AGTATAGGAATATGGAAGGG+AGG | - | chr2.4:20556286-20556305 | None:intergenic | 40.0% | |
| AGTTTCGGATCAGTGAAAAC+AGG | - | chr2.4:20554805-20554824 | None:intergenic | 40.0% | |
| ATCAATGTATTGCAGTCCTG+AGG | + | chr2.4:20555879-20555898 | MS.gene059724:intron | 40.0% | |
| ATCCGTCTGAATCTAGCTAT+TGG | + | chr2.4:20554188-20554207 | MS.gene059724:intron | 40.0% | |
| ATCGACATCAATCGCTGTTT+GGG | + | chr2.4:20556450-20556469 | MS.gene059724:CDS | 40.0% | |
| ATGAATGAGAATCTGCGAAG+GGG | - | chr2.4:20552958-20552977 | None:intergenic | 40.0% | |
| ATGAGGTGCGGAATATTGTT+TGG | - | chr2.4:20556642-20556661 | None:intergenic | 40.0% | |
| CAAAATTGACCATGAACCTC+AGG | - | chr2.4:20555898-20555917 | None:intergenic | 40.0% | |
| CAGATTACAACTACTGTCTG+TGG | + | chr2.4:20555016-20555035 | MS.gene059724:intron | 40.0% | |
| CATTTGTCGGTATTCAGACT+GGG | + | chr2.4:20553139-20553158 | MS.gene059724:CDS | 40.0% | |
| GAACAATTGAAAGACGCTGA+AGG | - | chr2.4:20556680-20556699 | None:intergenic | 40.0% | |
| GAAGATGTCTGCGCTTAAAA+GGG | + | chr2.4:20554377-20554396 | MS.gene059724:CDS | 40.0% | |
| GATGAATGAGAATCTGCGAA+GGG | - | chr2.4:20552959-20552978 | None:intergenic | 40.0% | |
| GGTTTGGAGGAAAATGAAGA+AGG | - | chr2.4:20552910-20552929 | None:intergenic | 40.0% | |
| GTATAGGAATATGGAAGGGA+GGG | - | chr2.4:20556285-20556304 | None:intergenic | 40.0% | |
| GTCCAATAGCTAGATTCAGA+CGG | - | chr2.4:20554193-20554212 | None:intergenic | 40.0% | |
| GTTGAAAACTGTATCGCTGT+TGG | - | chr2.4:20557470-20557489 | None:intergenic | 40.0% | |
| GTTGTACACTATGAAACCCA+AGG | - | chr2.4:20555841-20555860 | None:intergenic | 40.0% | |
| GTTTATGTTGAGACGTTTGG+AGG | - | chr2.4:20555190-20555209 | None:intergenic | 40.0% | |
| GTTTCGGATCAGTGAAAACA+GGG | - | chr2.4:20554804-20554823 | None:intergenic | 40.0% | |
| TAAACTGTAGCAGCCTCAAA+GGG | + | chr2.4:20555091-20555110 | MS.gene059724:intron | 40.0% | |
| TAGTACCGTTGAAGTCCATT+AGG | - | chr2.4:20553219-20553238 | None:intergenic | 40.0% | |
| TATAGGAATATGGAAGGGAG+GGG | - | chr2.4:20556284-20556303 | None:intergenic | 40.0% | |
| TATTCCTATTGCTTCCAGCT+TGG | + | chr2.4:20554299-20554318 | MS.gene059724:intron | 40.0% | |
| TATTTCAATTGCCTCTTCCC+TGG | + | chr2.4:20556760-20556779 | MS.gene059724:intron | 40.0% | |
| TCACTGATCCGAAACTCAAA+TGG | + | chr2.4:20554809-20554828 | MS.gene059724:CDS | 40.0% | |
| TGACAAAGATGTGGAACAGA+CGG | - | chr2.4:20555660-20555679 | None:intergenic | 40.0% | |
| TGATGAATGAGAATCTGCGA+AGG | - | chr2.4:20552960-20552979 | None:intergenic | 40.0% | |
| TGCCATAACCTTATGCCTAT+CGG | - | chr2.4:20553121-20553140 | None:intergenic | 40.0% | |
| TTAAACTGTAGCAGCCTCAA+AGG | + | chr2.4:20555090-20555109 | MS.gene059724:intron | 40.0% | |
| TTGAGACGTTTGGAGGAAAA+GGG | - | chr2.4:20555183-20555202 | None:intergenic | 40.0% | |
| TTTGGATGGTGTTTACCTAC+AGG | + | chr2.4:20557718-20557737 | MS.gene059724:intron | 40.0% | |
| TTTGTTACCGGTGCAATTTG+GGG | + | chr2.4:20554238-20554257 | MS.gene059724:intron | 40.0% | |
| ! | AAAACCTTTTCCCCACTAAG+TGG | - | chr2.4:20553536-20553555 | None:intergenic | 40.0% |
| ! | AAACCTTTTCCCCACTAAGT+GGG | - | chr2.4:20553535-20553554 | None:intergenic | 40.0% |
| ! | AACTGTATCGCTGTTGGTTA+AGG | - | chr2.4:20557464-20557483 | None:intergenic | 40.0% |
| ! | AACTTGCTCACTGCTTGATA+TGG | - | chr2.4:20555992-20556011 | None:intergenic | 40.0% |
| ! | AATTGGAAGCTTCCCTTTTG+TGG | + | chr2.4:20553919-20553938 | MS.gene059724:intron | 40.0% |
| ! | ACTGTATCGCTGTTGGTTAA+GGG | - | chr2.4:20557463-20557482 | None:intergenic | 40.0% |
| ! | CTCAGAACACACGTTTTGTA+TGG | - | chr2.4:20554462-20554481 | None:intergenic | 40.0% |
| ! | CTTTTGTTACCGGTGCAATT+TGG | + | chr2.4:20554236-20554255 | MS.gene059724:intron | 40.0% |
| ! | GGAACAATCAATGGTTGATG+AGG | - | chr2.4:20556659-20556678 | None:intergenic | 40.0% |
| ! | GTGAATCTTTGAGGAAGACT+TGG | + | chr2.4:20553181-20553200 | MS.gene059724:CDS | 40.0% |
| ! | TGGGATATTCCAAAGTGTTC+AGG | + | chr2.4:20556469-20556488 | MS.gene059724:CDS | 40.0% |
| ! | TTTTCGGATGTTCAGCAATG+AGG | + | chr2.4:20556348-20556367 | MS.gene059724:CDS | 40.0% |
| !! | AACCAGCATATTGGCTTCTT+TGG | + | chr2.4:20555341-20555360 | MS.gene059724:intron | 40.0% |
| !! | AATCAATGGTTGATGAGGTG+CGG | - | chr2.4:20556654-20556673 | None:intergenic | 40.0% |
| !!! | AAGCTACTGGATTGGCTTTT+AGG | + | chr2.4:20554325-20554344 | MS.gene059724:CDS | 40.0% |
| !!! | CCCTTTTGTGGTCTTGTTTT+TGG | + | chr2.4:20553931-20553950 | MS.gene059724:intron | 40.0% |
| AAACAACGCGAACGGATCTA+GGG | - | chr2.4:20553053-20553072 | None:intergenic | 45.0% | |
| AAGAAGCTTAGAGTTGGAGG+TGG | - | chr2.4:20556805-20556824 | None:intergenic | 45.0% | |
| ACCCCCTGAAATGCACTTTA+AGG | + | chr2.4:20557256-20557275 | MS.gene059724:intron | 45.0% | |
| ACCCTGAAAGAAATTGCACC+TGG | - | chr2.4:20554633-20554652 | None:intergenic | 45.0% | |
| ACCGAAGAATGAACTCGACT+CGG | + | chr2.4:20557169-20557188 | MS.gene059724:intron | 45.0% | |
| ACCGAGTCGAGTTCATTCTT+CGG | - | chr2.4:20557173-20557192 | None:intergenic | 45.0% | |
| ACGGAGATGTTCATGTCATG+TGG | + | chr2.4:20555814-20555833 | MS.gene059724:intron | 45.0% | |
| AGCCAAAGAAGCCAATATGC+TGG | - | chr2.4:20555346-20555365 | None:intergenic | 45.0% | |
| ATCAAATGGAGGATAGGCAG+AGG | + | chr2.4:20553393-20553412 | MS.gene059724:intron | 45.0% | |
| CAGAATTGTGTTTGGTTGGC+TGG | + | chr2.4:20555678-20555697 | MS.gene059724:intron | 45.0% | |
| CAGACTGGGTTTAGATCTGT+TGG | + | chr2.4:20553153-20553172 | MS.gene059724:CDS | 45.0% | |
| CATCGACATCAATCGCTGTT+TGG | + | chr2.4:20556449-20556468 | MS.gene059724:CDS | 45.0% | |
| CATGCATCCTATGTACGTCT+GGG | - | chr2.4:20554773-20554792 | None:intergenic | 45.0% | |
| CCAGAAATGTTGTTGCCGAT+AGG | + | chr2.4:20553103-20553122 | MS.gene059724:CDS | 45.0% | |
| CCCCCTGAAATGCACTTTAA+GGG | + | chr2.4:20557257-20557276 | MS.gene059724:intron | 45.0% | |
| CCCCCTTAAAGTGCATTTCA+GGG | - | chr2.4:20557262-20557281 | None:intergenic | 45.0% | |
| CCCCTGAAATGCACTTTAAG+GGG | + | chr2.4:20557258-20557277 | MS.gene059724:intron | 45.0% | |
| CCCCTTAAAGTGCATTTCAG+GGG | - | chr2.4:20557261-20557280 | None:intergenic | 45.0% | |
| CCCTTAAAGTGCATTTCAGG+GGG | - | chr2.4:20557260-20557279 | None:intergenic | 45.0% | |
| CCGTTGAAGTCCATTAGGAT+CGG | - | chr2.4:20553214-20553233 | None:intergenic | 45.0% | |
| CCTATCGGCAACAACATTTC+TGG | - | chr2.4:20553106-20553125 | None:intergenic | 45.0% | |
| CGAAGATGTCTGCGCTTAAA+AGG | + | chr2.4:20554376-20554395 | MS.gene059724:CDS | 45.0% | |
| CTGCATTCAGAGTCCAACAA+TGG | + | chr2.4:20557789-20557808 | MS.gene059724:CDS | 45.0% | |
| CTGGGTTTAGATCTGTTGGA+AGG | + | chr2.4:20553157-20553176 | MS.gene059724:CDS | 45.0% | |
| CTTGGAAGAAGCTACTGGAT+TGG | + | chr2.4:20554317-20554336 | MS.gene059724:CDS | 45.0% | |
| GAATGCAGCTGTCCATTTGA+TGG | - | chr2.4:20557777-20557796 | None:intergenic | 45.0% | |
| GACGCTGAAGGAACAATCAA+TGG | - | chr2.4:20556668-20556687 | None:intergenic | 45.0% | |
| GCATTTGTCGGTATTCAGAC+TGG | + | chr2.4:20553138-20553157 | MS.gene059724:CDS | 45.0% | |
| GCCAGGTGCAATTTCTTTCA+GGG | + | chr2.4:20554629-20554648 | MS.gene059724:intron | 45.0% | |
| GTCCTTCCTGGCTTAATTTC+CGG | + | chr2.4:20554855-20554874 | MS.gene059724:intron | 45.0% | |
| GTGGTTGGGTATAGACGAAT+AGG | - | chr2.4:20557430-20557449 | None:intergenic | 45.0% | |
| GTTCATGTCATGTGGTCCTT+GGG | + | chr2.4:20555822-20555841 | MS.gene059724:intron | 45.0% | |
| GTTGAGACGTTTGGAGGAAA+AGG | - | chr2.4:20555184-20555203 | None:intergenic | 45.0% | |
| TAGATCCGTTCGCGTTGTTT+GGG | + | chr2.4:20553053-20553072 | MS.gene059724:CDS | 45.0% | |
| TATTGCAGTCCTGAGGTTCA+TGG | + | chr2.4:20555886-20555905 | MS.gene059724:intron | 45.0% | |
| TCATGCATCCTATGTACGTC+TGG | - | chr2.4:20554774-20554793 | None:intergenic | 45.0% | |
| TCTCATTCCCAGACGTACAT+AGG | + | chr2.4:20554763-20554782 | MS.gene059724:CDS | 45.0% | |
| TCTGGATTACAGAGACCTGT+AGG | - | chr2.4:20557736-20557755 | None:intergenic | 45.0% | |
| TCTTCCAAGCTGGAAGCAAT+AGG | - | chr2.4:20554306-20554325 | None:intergenic | 45.0% | |
| TGAAGTCCATTAGGATCGGA+AGG | - | chr2.4:20553210-20553229 | None:intergenic | 45.0% | |
| TGAGACGTTTGGAGGAAAAG+GGG | - | chr2.4:20555182-20555201 | None:intergenic | 45.0% | |
| TGCCGATAGGCATAAGGTTA+TGG | + | chr2.4:20553116-20553135 | MS.gene059724:CDS | 45.0% | |
| TGCTGATGTTGTGTCAAGCT+TGG | + | chr2.4:20555469-20555488 | MS.gene059724:CDS | 45.0% | |
| TGGTCAGACATATGCACATG+TGG | + | chr2.4:20557652-20557671 | MS.gene059724:intron | 45.0% | |
| TGGTCGCTCTTAGGAATAAC+AGG | + | chr2.4:20555489-20555508 | MS.gene059724:CDS | 45.0% | |
| TGGTTTCCTTCCGATCCTAA+TGG | + | chr2.4:20553201-20553220 | MS.gene059724:CDS | 45.0% | |
| TGTTCATGTCATGTGGTCCT+TGG | + | chr2.4:20555821-20555840 | MS.gene059724:intron | 45.0% | |
| TGTTGTTGCCGATAGGCATA+AGG | + | chr2.4:20553110-20553129 | MS.gene059724:CDS | 45.0% | |
| TTCCGGAAATTAAGCCAGGA+AGG | - | chr2.4:20554860-20554879 | None:intergenic | 45.0% | |
| TTTCAGACCCCAAATTGCAC+CGG | - | chr2.4:20554248-20554267 | None:intergenic | 45.0% | |
| ! | AAGAAACCTTGTGTGGTGGA+GGG | - | chr2.4:20557086-20557105 | None:intergenic | 45.0% |
| ! | ACGTGGGTTGAAGAATGGTT+TGG | - | chr2.4:20552926-20552945 | None:intergenic | 45.0% |
| ! | ATTTTACCGGCAACTCTTGC+AGG | + | chr2.4:20555375-20555394 | MS.gene059724:intron | 45.0% |
| ! | CACTGCTAGCTACTTTGCAT+AGG | - | chr2.4:20553970-20553989 | None:intergenic | 45.0% |
| ! | CATTTGTTGAGGCACCTTCT+TGG | + | chr2.4:20557494-20557513 | MS.gene059724:intron | 45.0% |
| ! | CCCTGAAATGCACTTTAAGG+GGG | + | chr2.4:20557259-20557278 | MS.gene059724:intron | 45.0% |
| ! | TGGGTTGAAGAATGGTTTGG+AGG | - | chr2.4:20552923-20552942 | None:intergenic | 45.0% |
| ! | TTGGAAGGCGTGAATCTTTG+AGG | + | chr2.4:20553172-20553191 | MS.gene059724:CDS | 45.0% |
| !! | CCGATCCTAATGGACTTCAA+CGG | + | chr2.4:20553211-20553230 | MS.gene059724:CDS | 45.0% |
| AAGCTTAGAGTTGGAGGTGG+TGG | - | chr2.4:20556802-20556821 | None:intergenic | 50.0% | |
| AAGGGTTCGTGTGATGTGGT+TGG | - | chr2.4:20557445-20557464 | None:intergenic | 50.0% | |
| AAGTGCATTTCAGGGGGTTC+TGG | - | chr2.4:20557254-20557273 | None:intergenic | 50.0% | |
| AATCTTCCCTCCACCACACA+AGG | + | chr2.4:20557077-20557096 | MS.gene059724:intron | 50.0% | |
| AGCTTAGAGTTGGAGGTGGT+GGG | - | chr2.4:20556801-20556820 | None:intergenic | 50.0% | |
| AGGGTTCGTGTGATGTGGTT+GGG | - | chr2.4:20557444-20557463 | None:intergenic | 50.0% | |
| CAAACAACGCGAACGGATCT+AGG | - | chr2.4:20553054-20553073 | None:intergenic | 50.0% | |
| CAAGAAACCTTGTGTGGTGG+AGG | - | chr2.4:20557087-20557106 | None:intergenic | 50.0% | |
| CGATGAGGAGTAAAAGGAGG+AGG | - | chr2.4:20552987-20553006 | None:intergenic | 50.0% | |
| CGGTTTGAGAGATGCCAAGA+AGG | - | chr2.4:20557511-20557530 | None:intergenic | 50.0% | |
| CTAGATCCGTTCGCGTTGTT+TGG | + | chr2.4:20553052-20553071 | MS.gene059724:CDS | 50.0% | |
| CTCATACCTGCAAGAGTTGC+CGG | - | chr2.4:20555384-20555403 | None:intergenic | 50.0% | |
| GAGGAGTAAAAGGAGGAGGA+AGG | - | chr2.4:20552983-20553002 | None:intergenic | 50.0% | |
| GCCCCCTTAAAGTGCATTTC+AGG | - | chr2.4:20557263-20557282 | None:intergenic | 50.0% | |
| GGCCAGGTGCAATTTCTTTC+AGG | + | chr2.4:20554628-20554647 | MS.gene059724:intron | 50.0% | |
| GGTCTGTAGACCATCTGCTT+TGG | + | chr2.4:20555699-20555718 | MS.gene059724:intron | 50.0% | |
| GGTTAAGGGTTCGTGTGATG+TGG | - | chr2.4:20557449-20557468 | None:intergenic | 50.0% | |
| GTGATCCCAAACAACGCGAA+CGG | - | chr2.4:20553061-20553080 | None:intergenic | 50.0% | |
| TCCAGCTTGGAAGAAGCTAC+TGG | + | chr2.4:20554312-20554331 | MS.gene059724:intron | 50.0% | |
| TCCAGTAGCTTCTTCCAAGC+TGG | - | chr2.4:20554316-20554335 | None:intergenic | 50.0% | |
| TGAGAATCTGCGAAGGGGAA+TGG | - | chr2.4:20552953-20552972 | None:intergenic | 50.0% | |
| TGTCAAGCTTGGTCGCTCTT+AGG | + | chr2.4:20555480-20555499 | MS.gene059724:CDS | 50.0% | |
| ! | GTGTGACGTGGGTTGAAGAA+TGG | - | chr2.4:20552931-20552950 | None:intergenic | 50.0% |
| ! | GTTCGCGTTGTTTGGGATCA+CGG | + | chr2.4:20553060-20553079 | MS.gene059724:CDS | 50.0% |
| !! | AACAACATTTCTGGCGCCGT+TGG | - | chr2.4:20553097-20553116 | None:intergenic | 50.0% |
| !! | TTTTCCCCACTAAGTGGGCT+CGG | - | chr2.4:20553530-20553549 | None:intergenic | 50.0% |
| ATGTAGCCGAGCCCACTTAG+TGG | + | chr2.4:20553521-20553540 | MS.gene059724:intron | 55.0% | |
| GAAGGGGAATGGTGTGACGT+GGG | - | chr2.4:20552942-20552961 | None:intergenic | 55.0% | |
| GAGCCCACTTAGTGGGGAAA+AGG | + | chr2.4:20553529-20553548 | MS.gene059724:intron | 55.0% | |
| GCTTAGAGTTGGAGGTGGTG+GGG | - | chr2.4:20556800-20556819 | None:intergenic | 55.0% | |
| TGTAGCCGAGCCCACTTAGT+GGG | + | chr2.4:20553522-20553541 | MS.gene059724:intron | 55.0% | |
| ! | ACTAAGTGGGCTCGGCTACA+TGG | - | chr2.4:20553522-20553541 | None:intergenic | 55.0% |
| !! | ATTTCTGGCGCCGTTGGTGA+CGG | - | chr2.4:20553091-20553110 | None:intergenic | 55.0% |
| CGAAGGGGAATGGTGTGACG+TGG | - | chr2.4:20552943-20552962 | None:intergenic | 60.0% | |
| GGAAGGGAGGGGACTGAACA+AGG | - | chr2.4:20556273-20556292 | None:intergenic | 60.0% | |
| GTAGCCGAGCCCACTTAGTG+GGG | + | chr2.4:20553523-20553542 | MS.gene059724:intron | 60.0% | |
| !! | AGTTGGAGGTGGTGGGGACA+AGG | - | chr2.4:20556794-20556813 | None:intergenic | 60.0% |
| !! | GTTGGAGGTGGTGGGGACAA+GGG | - | chr2.4:20556793-20556812 | None:intergenic | 60.0% |
| AGGGAGGGTAGCCAGGGAAG+AGG | - | chr2.4:20556774-20556793 | None:intergenic | 65.0% | |
| CACGGCAACGCCGTCACCAA+CGG | + | chr2.4:20553078-20553097 | MS.gene059724:CDS | 65.0% | |
| GGGACAAGGGAGGGTAGCCA+GGG | - | chr2.4:20556780-20556799 | None:intergenic | 65.0% | |
| !! | GAGGTGGTGGGGACAAGGGA+GGG | - | chr2.4:20556789-20556808 | None:intergenic | 65.0% |
| GGGGACAAGGGAGGGTAGCC+AGG | - | chr2.4:20556781-20556800 | None:intergenic | 70.0% | |
| !! | GGAGGTGGTGGGGACAAGGG+AGG | - | chr2.4:20556790-20556809 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 20552904 | 20557825 | 20552904 | ID=MS.gene059724 |
| chr2.4 | mRNA | 20552904 | 20557825 | 20552904 | ID=MS.gene059724.t1;Parent=MS.gene059724 |
| chr2.4 | exon | 20552904 | 20553232 | 20552904 | ID=MS.gene059724.t1.exon1;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20552904 | 20553232 | 20552904 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20554317 | 20554469 | 20554317 | ID=MS.gene059724.t1.exon2;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20554317 | 20554469 | 20554317 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20554551 | 20554633 | 20554551 | ID=MS.gene059724.t1.exon3;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20554551 | 20554633 | 20554551 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20554731 | 20554830 | 20554731 | ID=MS.gene059724.t1.exon4;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20554731 | 20554830 | 20554731 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20555397 | 20555510 | 20555397 | ID=MS.gene059724.t1.exon5;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20555397 | 20555510 | 20555397 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20556348 | 20556490 | 20556348 | ID=MS.gene059724.t1.exon6;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20556348 | 20556490 | 20556348 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| chr2.4 | exon | 20557740 | 20557825 | 20557740 | ID=MS.gene059724.t1.exon7;Parent=MS.gene059724.t1 |
| chr2.4 | CDS | 20557740 | 20557825 | 20557740 | ID=cds.MS.gene059724.t1;Parent=MS.gene059724.t1 |
| Gene Sequence |
| Protein sequence |
