Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93402.t1 | XP_013469959.1 | 99.8 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 2.40E-263 | 917.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93402.t1 | P33629 | 98.0 | 450 | 9 | 0 | 1 | 450 | 1 | 450 | 1.6e-260 | 899.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93402.t1 | A0A072VQC8 | 99.8 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 1.7e-263 | 917.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049488 | MS.gene93402 | -0.804976 | 1.67E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene93402 | -0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene050426 | MS.gene93402 | 0.841612 | 4.28E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene93402 | -0.80444 | 2.16E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene93402 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene93402 | -0.808484 | 3.03E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene93402 | -0.823584 | 1.28E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene93402 | -0.836456 | 9.26E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene93402 | -0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene057356 | MS.gene93402 | 0.820934 | 5.28E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene93402 | -0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene059724 | MS.gene93402 | 0.814452 | 1.53E-51 | -1.69E-46 |
| MS.gene060636 | MS.gene93402 | 0.801125 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93402.t1 | MTR_1g106005 | 99.778 | 450 | 1 | 0 | 1 | 450 | 1 | 450 | 0.0 | 937 |
| MS.gene93402.t1 | MTR_3g110720 | 97.773 | 449 | 10 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| MS.gene93402.t1 | MTR_4g097830 | 97.118 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 0.0 | 910 |
| MS.gene93402.t1 | MTR_8g085980 | 92.644 | 435 | 32 | 0 | 1 | 435 | 1 | 435 | 0.0 | 832 |
| MS.gene93402.t1 | MTR_7g085800 | 91.196 | 443 | 38 | 1 | 1 | 443 | 1 | 442 | 0.0 | 827 |
| MS.gene93402.t1 | MTR_6g029190 | 83.149 | 451 | 72 | 2 | 1 | 450 | 1 | 448 | 0.0 | 776 |
| MS.gene93402.t1 | MTR_2g041670 | 72.829 | 449 | 117 | 2 | 1 | 449 | 1 | 444 | 0.0 | 653 |
| MS.gene93402.t1 | MTR_2g041400 | 74.359 | 429 | 105 | 2 | 1 | 429 | 1 | 424 | 0.0 | 640 |
| MS.gene93402.t1 | MTR_4g094535 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.57e-124 | 368 |
| MS.gene93402.t1 | MTR_7g089120 | 42.105 | 437 | 237 | 4 | 1 | 434 | 1 | 424 | 1.37e-123 | 367 |
| MS.gene93402.t1 | MTR_4g017630 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 1.71e-123 | 367 |
| MS.gene93402.t1 | MTR_3g113970 | 40.961 | 437 | 244 | 3 | 1 | 434 | 1 | 426 | 2.15e-123 | 366 |
| MS.gene93402.t1 | MTR_4g019110 | 42.105 | 437 | 237 | 3 | 1 | 434 | 1 | 424 | 3.70e-123 | 366 |
| MS.gene93402.t1 | MTR_4g019090 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 9.31e-123 | 365 |
| MS.gene93402.t1 | MTR_8g107250 | 41.244 | 434 | 246 | 2 | 1 | 434 | 1 | 425 | 1.21e-122 | 364 |
| MS.gene93402.t1 | MTR_1g101130 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 1.60e-122 | 364 |
| MS.gene93402.t1 | MTR_2g031310 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.35e-122 | 363 |
| MS.gene93402.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.44e-121 | 360 |
| MS.gene93402.t1 | MTR_3g063410 | 98.052 | 154 | 3 | 0 | 252 | 405 | 24 | 177 | 4.39e-111 | 325 |
| MS.gene93402.t1 | MTR_3g063410 | 97.826 | 138 | 3 | 0 | 268 | 405 | 1 | 138 | 3.00e-97 | 289 |
| MS.gene93402.t1 | MTR_7g117050 | 31.390 | 446 | 283 | 9 | 2 | 433 | 3 | 439 | 2.92e-76 | 246 |
| MS.gene93402.t1 | MTR_6g075280 | 46.875 | 96 | 32 | 1 | 355 | 450 | 608 | 684 | 3.32e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93402.t1 | AT1G04820 | 96.000 | 450 | 18 | 0 | 1 | 450 | 1 | 450 | 0.0 | 905 |
| MS.gene93402.t1 | AT1G50010 | 96.000 | 450 | 18 | 0 | 1 | 450 | 1 | 450 | 0.0 | 905 |
| MS.gene93402.t1 | AT4G14960 | 95.778 | 450 | 19 | 0 | 1 | 450 | 1 | 450 | 0.0 | 904 |
| MS.gene93402.t1 | AT5G19780 | 93.563 | 435 | 28 | 0 | 1 | 435 | 1 | 435 | 0.0 | 838 |
| MS.gene93402.t1 | AT5G19770 | 93.563 | 435 | 28 | 0 | 1 | 435 | 1 | 435 | 0.0 | 838 |
| MS.gene93402.t1 | AT1G64740 | 90.115 | 435 | 43 | 0 | 1 | 435 | 1 | 435 | 0.0 | 812 |
| MS.gene93402.t1 | AT4G14960 | 93.612 | 407 | 19 | 1 | 1 | 407 | 1 | 400 | 0.0 | 796 |
| MS.gene93402.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 2.27e-125 | 371 |
| MS.gene93402.t1 | AT5G12250 | 41.648 | 437 | 239 | 4 | 1 | 434 | 1 | 424 | 7.54e-124 | 367 |
| MS.gene93402.t1 | AT5G62700 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.59e-123 | 367 |
| MS.gene93402.t1 | AT5G62690 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.59e-123 | 367 |
| MS.gene93402.t1 | AT1G20010 | 41.014 | 434 | 247 | 2 | 1 | 434 | 1 | 425 | 5.73e-123 | 365 |
| MS.gene93402.t1 | AT2G29550 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 9.34e-123 | 365 |
| MS.gene93402.t1 | AT4G20890 | 41.475 | 434 | 244 | 2 | 1 | 434 | 1 | 424 | 1.45e-122 | 364 |
| MS.gene93402.t1 | AT5G23860 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.00e-122 | 364 |
| MS.gene93402.t1 | AT5G23860 | 41.244 | 434 | 245 | 2 | 1 | 434 | 1 | 424 | 2.00e-122 | 364 |
| MS.gene93402.t1 | AT5G44340 | 41.244 | 434 | 245 | 3 | 1 | 434 | 1 | 424 | 1.75e-120 | 359 |
| MS.gene93402.t1 | AT5G05620 | 32.063 | 446 | 280 | 9 | 2 | 433 | 3 | 439 | 1.74e-77 | 249 |
| MS.gene93402.t1 | AT3G61650 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 3.74e-76 | 246 |
Find 140 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGATGTTGCTGTTCTTC+TGG | 0.208803 | 1.1:-76150387 | MS.gene93402:CDS |
| AGAAAGCATGAAATGGATTC+TGG | 0.259381 | 1.1:+76150071 | None:intergenic |
| ATGAAATGGATTCTGGGATA+TGG | 0.263566 | 1.1:+76150078 | None:intergenic |
| GAGCGTCTGTCTGTTGATTA+TGG | 0.264658 | 1.1:-76150515 | MS.gene93402:CDS |
| ACTGCTTCTTTGAGGTTTGA+TGG | 0.277274 | 1.1:-76150144 | MS.gene93402:CDS |
| CATCCTTGACTGCTTCTTTG+AGG | 0.310525 | 1.1:-76150152 | MS.gene93402:CDS |
| CATCGGTCAAGCCGGTATTC+AGG | 0.312386 | 1.1:-76151932 | MS.gene93402:CDS |
| GGAGGAACCGGTTCTGGTCT+TGG | 0.343617 | 1.1:-76150551 | MS.gene93402:CDS |
| CCTCTCCACCCACTCCCTCT+TGG | 0.347748 | 1.1:-76150414 | MS.gene93402:CDS |
| GCCTTCTCAGCAGATATAAC+TGG | 0.348083 | 1.1:+76150039 | None:intergenic |
| CAAGAGGACCATTCAGTTTG+TGG | 0.350369 | 1.1:-76149848 | MS.gene93402:CDS |
| CAGCCACCTACTGTTGTTCC+TGG | 0.350820 | 1.1:-76149787 | MS.gene93402:CDS |
| AGCAAGATCCTCACGGGCTT+CGG | 0.364482 | 1.1:+76149603 | None:intergenic |
| GTTGGAGGAGGAACCGGTTC+TGG | 0.366673 | 1.1:-76150557 | MS.gene93402:CDS |
| TTCAGGTCGGAAATGCTTGC+TGG | 0.378485 | 1.1:-76151915 | MS.gene93402:CDS |
| TTGCCACTGATGAGCTGCTC+AGG | 0.398345 | 1.1:+76150809 | None:intergenic |
| CAGTCTTGTCACTCGGCATT+TGG | 0.399542 | 1.1:+76150972 | None:intergenic |
| CCGTGAGGATCTTGCTGCTT+TGG | 0.402547 | 1.1:-76149596 | MS.gene93402:CDS |
| CTGGTATGTGGGTGAGGGTA+TGG | 0.404210 | 1.1:-76149641 | MS.gene93402:CDS |
| CCTTAACCGTCTTGTTTCTC+AGG | 0.406634 | 1.1:-76150300 | MS.gene93402:intron |
| TCACTCGGCATTTGGCCATC+AGG | 0.408719 | 1.1:+76150980 | None:intergenic |
| GAAAAGGATTATGAAGAAGT+TGG | 0.409613 | 1.1:-76149574 | MS.gene93402:CDS |
| TTTGTGGATTGGTGCCCTAC+TGG | 0.413566 | 1.1:-76149832 | MS.gene93402:CDS |
| AGAGATCGTTGATCTGTGTT+TGG | 0.419543 | 1.1:-76150642 | MS.gene93402:CDS |
| AACACCTTCTTCAGCGAGAC+TGG | 0.421898 | 1.1:-76150926 | MS.gene93402:CDS |
| AATGCTGTTGGAGGAGGAAC+CGG | 0.424659 | 1.1:-76150563 | MS.gene93402:CDS |
| ATGGAAAGAAATCCAAGCTT+GGG | 0.425337 | 1.1:-76150496 | MS.gene93402:CDS |
| ACAAGTGTGGCTGAGGTGTT+TGG | 0.429571 | 1.1:-76149715 | MS.gene93402:CDS |
| TACTGTCTATCCCTCCCCTC+AGG | 0.434518 | 1.1:-76150471 | MS.gene93402:CDS |
| CAGAGAACCAAGACCAGAAC+CGG | 0.451934 | 1.1:+76150544 | None:intergenic |
| ACGGTTAAGGTTGGTGTAAG+TGG | 0.452971 | 1.1:+76150313 | None:intergenic |
| GGATCTTGCTGCTTTGGAAA+AGG | 0.453193 | 1.1:-76149590 | MS.gene93402:CDS |
| GACAGCAGCATTCACATCCT+TGG | 0.453229 | 1.1:+76149885 | None:intergenic |
| TGCATTTGTTCACTGGTATG+TGG | 0.454287 | 1.1:-76149653 | MS.gene93402:CDS |
| TTCTTCAGCGAGACTGGTGC+TGG | 0.455019 | 1.1:-76150920 | MS.gene93402:CDS |
| CATATGAAGAAAGCATGAAA+TGG | 0.460970 | 1.1:+76150064 | None:intergenic |
| CACAAACTGAATGGTCCTCT+TGG | 0.463910 | 1.1:+76149849 | None:intergenic |
| CCTGAGAAACAAGACGGTTA+AGG | 0.472342 | 1.1:+76150300 | None:intergenic |
| CCAAGCGTGCATTTGTTCAC+TGG | 0.476016 | 1.1:-76149660 | MS.gene93402:CDS |
| TGTTCACTGGTATGTGGGTG+AGG | 0.477980 | 1.1:-76149647 | MS.gene93402:CDS |
| GAAGAAGTTGGTGCCGAGTC+TGG | 0.479857 | 1.1:-76149562 | MS.gene93402:CDS |
| TGAAATGGATTCTGGGATAT+GGG | 0.482192 | 1.1:+76150079 | None:intergenic |
| GAAAGCATGAAATGGATTCT+GGG | 0.486512 | 1.1:+76150072 | None:intergenic |
| GTGGGTGAGGGTATGGAAGA+AGG | 0.492111 | 1.1:-76149634 | MS.gene93402:CDS |
| ATGACCACGGGCAAAGTTGT+TGG | 0.493110 | 1.1:+76150775 | None:intergenic |
| GATATGGGACCAAGTTGGTC+TGG | 0.495701 | 1.1:+76150094 | None:intergenic |
| AGCATTTCCGACCTGAATAC+CGG | 0.501769 | 1.1:+76151921 | None:intergenic |
| GGACCATTCAGTTTGTGGAT+TGG | 0.503034 | 1.1:-76149843 | MS.gene93402:CDS |
| TATGGAAAGAAATCCAAGCT+TGG | 0.504088 | 1.1:-76150497 | MS.gene93402:CDS |
| AAGCTATCTATGACATCTGT+AGG | 0.504342 | 1.1:-76150358 | MS.gene93402:CDS |
| TCCTGGTGGTGACCTTGCTA+AGG | 0.511101 | 1.1:-76149770 | MS.gene93402:CDS |
| TGAGGGCGGTGATGAAGATA+TGG | 0.511219 | 1.1:-76149539 | MS.gene93402:CDS |
| CAGTGTGCTCCAAGAGGGAG+TGG | 0.513536 | 1.1:+76150405 | None:intergenic |
| ACAGCAGCATTCACATCCTT+GGG | 0.514766 | 1.1:+76149886 | None:intergenic |
| CCAGTGAACAAATGCACGCT+TGG | 0.525328 | 1.1:+76149660 | None:intergenic |
| CACTTAGCCATCATAGATGA+TGG | 0.525506 | 1.1:+76149967 | None:intergenic |
| CCGAGTGACAAGACTGTTGG+AGG | 0.526598 | 1.1:-76150965 | MS.gene93402:CDS |
| CCCTCGCCATGGAAAGTACA+TGG | 0.526872 | 1.1:-76149941 | MS.gene93402:CDS |
| TTCTTATATGCACAGCCTGA+TGG | 0.528986 | 1.1:-76150995 | MS.gene93402:intron |
| AAACTCAACAAGTGTGGCTG+AGG | 0.529684 | 1.1:-76149722 | MS.gene93402:CDS |
| GTGGAGAGGACACTGTTGTA+TGG | 0.536266 | 1.1:+76150428 | None:intergenic |
| AGCACCAGTCTCGCTGAAGA+AGG | 0.536901 | 1.1:+76150922 | None:intergenic |
| AAGCTTGCGGATAACTGCAC+TGG | 0.544380 | 1.1:-76150608 | MS.gene93402:CDS |
| ATGCCGAGTGACAAGACTGT+TGG | 0.545145 | 1.1:-76150968 | MS.gene93402:CDS |
| TGATGGCTCAAAAGCACTGT+TGG | 0.546926 | 1.1:+76149984 | None:intergenic |
| GATAACTGCACTGGTCTCCA+AGG | 0.549224 | 1.1:-76150599 | MS.gene93402:CDS |
| GACTGAATTCCAGACCAACT+TGG | 0.549713 | 1.1:-76150103 | MS.gene93402:CDS |
| GCACCAATCCACAAACTGAA+TGG | 0.551570 | 1.1:+76149840 | None:intergenic |
| GAGGTGGAAACCTGAGGGGA+GGG | 0.551933 | 1.1:+76150461 | None:intergenic |
| ATAGACAGTAAACCCAAGCT+TGG | 0.556586 | 1.1:+76150484 | None:intergenic |
| CGGTTAAGGTTGGTGTAAGT+GGG | 0.558069 | 1.1:+76150314 | None:intergenic |
| CAACAGAGGTGGAAACCTGA+GGG | 0.558387 | 1.1:+76150456 | None:intergenic |
| AGCAAGCCATGTACTTTCCA+TGG | 0.560681 | 1.1:+76149935 | None:intergenic |
| TACTGTCTCGAACACGGCAT+CGG | 0.561154 | 1.1:-76151886 | MS.gene93402:CDS |
| TCAGGTCGGAAATGCTTGCT+GGG | 0.562273 | 1.1:-76151914 | MS.gene93402:CDS |
| GCTGCTCAGGATGGAAGAGC+TGG | 0.564014 | 1.1:+76150822 | None:intergenic |
| CAAAGCAGCAAGATCCTCAC+GGG | 0.564402 | 1.1:+76149597 | None:intergenic |
| GTTATCGATGAGGTGAGGAC+TGG | 0.564950 | 1.1:-76150854 | MS.gene93402:CDS |
| GTTGGTGCCGAGTCTGGTGA+GGG | 0.565547 | 1.1:-76149556 | MS.gene93402:CDS |
| TCAGTTCACATCGGTCAAGC+CGG | 0.567216 | 1.1:-76151940 | MS.gene93402:CDS |
| AAACCTCAAAGAAGCAGTCA+AGG | 0.571224 | 1.1:+76150149 | None:intergenic |
| ACCACGGGCAAAGTTGTTGG+CGG | 0.573940 | 1.1:+76150778 | None:intergenic |
| CACTGATGAGCTGCTCAGGA+TGG | 0.573952 | 1.1:+76150813 | None:intergenic |
| TGCCCTACTGGTTTCAAGTG+TGG | 0.577249 | 1.1:-76149820 | MS.gene93402:CDS |
| GCATTTGTTCACTGGTATGT+GGG | 0.578176 | 1.1:-76149652 | MS.gene93402:CDS |
| ATCACCGCCCTCACCAGACT+CGG | 0.580489 | 1.1:+76149549 | None:intergenic |
| GGACCGCATCAGAAAGCTTG+CGG | 0.580489 | 1.1:-76150621 | MS.gene93402:CDS |
| CCAAAGCAGCAAGATCCTCA+CGG | 0.583986 | 1.1:+76149596 | None:intergenic |
| TCCAGTTATATCTGCTGAGA+AGG | 0.585678 | 1.1:-76150040 | MS.gene93402:CDS |
| GCCATGTACTTTCCATGGCG+AGG | 0.586030 | 1.1:+76149940 | None:intergenic |
| ACCTTAGCAAGGTCACCACC+AGG | 0.592703 | 1.1:+76149769 | None:intergenic |
| GTTCACTGGTATGTGGGTGA+GGG | 0.594621 | 1.1:-76149646 | MS.gene93402:CDS |
| CCATGTACTTTCCATGGCGA+GGG | 0.595056 | 1.1:+76149941 | None:intergenic |
| TATCCGCAAGCTTTCTGATG+CGG | 0.599158 | 1.1:+76150618 | None:intergenic |
| AGTTGGTGCCGAGTCTGGTG+AGG | 0.599254 | 1.1:-76149557 | MS.gene93402:CDS |
| GTGCTCCAAGAGGGAGTGGG+TGG | 0.600125 | 1.1:+76150409 | None:intergenic |
| AGTGGGACGCTCAATGTCGA+GGG | 0.600615 | 1.1:+76150331 | None:intergenic |
| AGTGACAAGACTGTTGGAGG+CGG | 0.604399 | 1.1:-76150962 | MS.gene93402:CDS |
| AAGTGGGACGCTCAATGTCG+AGG | 0.610089 | 1.1:+76150330 | None:intergenic |
| CCGAGGTGATGTTGTTCCCA+AGG | 0.612147 | 1.1:-76149902 | MS.gene93402:CDS |
| CATCCTGAGCAGCTCATCAG+TGG | 0.614786 | 1.1:-76150812 | MS.gene93402:CDS |
| ACAACAGAGGTGGAAACCTG+AGG | 0.615914 | 1.1:+76150455 | None:intergenic |
| AGGATGGAAGAGCTGGCGAT+AGG | 0.617520 | 1.1:+76150829 | None:intergenic |
| CTGCCCTCTGTACCTTAGCA+AGG | 0.618015 | 1.1:+76149758 | None:intergenic |
| GCCGCCAACAACTTTGCCCG+TGG | 0.620859 | 1.1:-76150779 | MS.gene93402:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 1.1:-76149952 | MS.gene93402:CDS |
| CCAAGAGGGAGTGGGTGGAG+AGG | 0.621744 | 1.1:+76150414 | None:intergenic |
| CTCACCTCATCGATAACAGT+GGG | 0.621848 | 1.1:+76150860 | None:intergenic |
| AACATCAGTGTGCTCCAAGA+GGG | 0.623268 | 1.1:+76150400 | None:intergenic |
| ATACCACACTTGAAACCAGT+AGG | 0.623812 | 1.1:+76149817 | None:intergenic |
| AGAAACAAGACGGTTAAGGT+TGG | 0.623820 | 1.1:+76150304 | None:intergenic |
| CCTCCAACAGTCTTGTCACT+CGG | 0.624881 | 1.1:+76150965 | None:intergenic |
| ATAACTGCACTGGTCTCCAA+GGG | 0.627993 | 1.1:-76150598 | MS.gene93402:CDS |
| CCACCTACTGTTGTTCCTGG+TGG | 0.628220 | 1.1:-76149784 | MS.gene93402:CDS |
| TCACCACCAGGAACAACAGT+AGG | 0.629041 | 1.1:+76149781 | None:intergenic |
| TCTGGGATATGGGACCAAGT+TGG | 0.629717 | 1.1:+76150089 | None:intergenic |
| AGAGGTGGAAACCTGAGGGG+AGG | 0.631975 | 1.1:+76150460 | None:intergenic |
| GAGCTTTACTGTCTCGAACA+CGG | 0.642769 | 1.1:-76151892 | MS.gene93402:CDS |
| AGTGTGCTCCAAGAGGGAGT+GGG | 0.645027 | 1.1:+76150406 | None:intergenic |
| GATTTCAAACTCAACAAGTG+TGG | 0.651909 | 1.1:-76149728 | MS.gene93402:CDS |
| TGACCTTGCTAAGGTACAGA+GGG | 0.652678 | 1.1:-76149761 | MS.gene93402:CDS |
| CATACTGGTATAATGACCAC+GGG | 0.654535 | 1.1:+76150763 | None:intergenic |
| CAACATCAGTGTGCTCCAAG+AGG | 0.655535 | 1.1:+76150399 | None:intergenic |
| TACCACACTTGAAACCAGTA+GGG | 0.657871 | 1.1:+76149818 | None:intergenic |
| CCACCAGGAACAACAGTAGG+TGG | 0.665309 | 1.1:+76149784 | None:intergenic |
| GTGACCTTGCTAAGGTACAG+AGG | 0.667763 | 1.1:-76149762 | MS.gene93402:CDS |
| ACATACTGGTATAATGACCA+CGG | 0.669902 | 1.1:+76150762 | None:intergenic |
| GGTGCCGAGTCTGGTGAGGG+CGG | 0.669914 | 1.1:-76149553 | MS.gene93402:CDS |
| GTATGGCTCAACAACAGAGG+TGG | 0.674184 | 1.1:+76150445 | None:intergenic |
| GGTCAAGCCGGTATTCAGGT+CGG | 0.675515 | 1.1:-76151928 | MS.gene93402:CDS |
| TGAGCCCACTGTTATCGATG+AGG | 0.676846 | 1.1:-76150864 | MS.gene93402:CDS |
| TCGCTACAATCAAAACCAAG+AGG | 0.680258 | 1.1:-76149864 | MS.gene93402:CDS |
| TAGCTACCTGAGAAACAAGA+CGG | 0.682350 | 1.1:+76150294 | None:intergenic |
| CCACTGTTATCGATGAGGTG+AGG | 0.685674 | 1.1:-76150859 | MS.gene93402:CDS |
| CCTCACCTCATCGATAACAG+TGG | 0.687640 | 1.1:+76150859 | None:intergenic |
| GAGTGCATTTCAGTTCACAT+CGG | 0.696942 | 1.1:-76151949 | MS.gene93402:CDS |
| GTTGTATGGCTCAACAACAG+AGG | 0.698181 | 1.1:+76150442 | None:intergenic |
| GCTTGCTGTTTGATGTACCG+AGG | 0.706496 | 1.1:-76149919 | MS.gene93402:CDS |
| AACAGAGGTGGAAACCTGAG+GGG | 0.715815 | 1.1:+76150457 | None:intergenic |
| CCTTGGGAACAACATCACCT+CGG | 0.723454 | 1.1:+76149902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAATTGAAAAAACAA+CGG | + | chr1.1:76149758-76149777 | None:intergenic | 15.0% |
| !!! | ATTTTCCATGTTAAATTAAT+CGG | - | chr1.1:76149816-76149835 | MS.gene93402:CDS | 15.0% |
| !! | AGTATCAAACTTTAATTGAA+TGG | + | chr1.1:76150387-76150406 | None:intergenic | 20.0% |
| !! | ATCAAATTTAGAAACAATAC+AGG | + | chr1.1:76149798-76149817 | None:intergenic | 20.0% |
| !! | TCAATTAAAGTTTGATACTA+TGG | - | chr1.1:76150388-76150407 | MS.gene93402:CDS | 20.0% |
| !! | TCTGTTTATGAGTTAATATA+TGG | - | chr1.1:76150119-76150138 | MS.gene93402:CDS | 20.0% |
| !! | TTACATAACCTAATAACAAA+CGG | + | chr1.1:76149945-76149964 | None:intergenic | 20.0% |
| !! | TTACATAACCTAATAACATA+CGG | + | chr1.1:76150288-76150307 | None:intergenic | 20.0% |
| ! | AAATATGTTATCTATGTTCG+TGG | - | chr1.1:76150251-76150270 | MS.gene93402:intron | 25.0% |
| ! | ATAACAAATCTGAACGAAAA+TGG | + | chr1.1:76149657-76149676 | None:intergenic | 25.0% |
| ! | ATCACAAATGAGTTATAATG+TGG | + | chr1.1:76150762-76150781 | None:intergenic | 25.0% |
| ! | TATTAGATCCGTATGTTATT+AGG | - | chr1.1:76150277-76150296 | MS.gene93402:intron | 25.0% |
| ! | TTATTTCAAGAGCTCATATA+TGG | - | chr1.1:76150464-76150483 | MS.gene93402:CDS | 25.0% |
| ! | TTTCCTTAGATCTGAAAAAT+AGG | + | chr1.1:76149730-76149749 | None:intergenic | 25.0% |
| !!! | AATTTGTGTCATTTTCAGTT+GGG | - | chr1.1:76150816-76150835 | MS.gene93402:CDS | 25.0% |
| !!! | CTTTGTTTTTGATTGTTTTC+AGG | - | chr1.1:76151302-76151321 | MS.gene93402:intron | 25.0% |
| !!! | GTTGTTTTGTTATGTTATCT+TGG | - | chr1.1:76150190-76150209 | MS.gene93402:intron | 25.0% |
| !!! | TAATTTGTGTCATTTTCAGT+TGG | - | chr1.1:76150815-76150834 | MS.gene93402:CDS | 25.0% |
| !!! | TATTAGATCCGTTTGTTATT+AGG | - | chr1.1:76149934-76149953 | MS.gene93402:CDS | 25.0% |
| AAATCTGAACGAAAATGGAA+TGG | + | chr1.1:76149652-76149671 | None:intergenic | 30.0% | |
| AACAATCAACAATTGAGAAG+TGG | + | chr1.1:76150326-76150345 | None:intergenic | 30.0% | |
| ACAATTCTGATTGTGAATTG+CGG | - | chr1.1:76151231-76151250 | MS.gene93402:intron | 30.0% | |
| CAGATCCGATTAATTTAACA+TGG | + | chr1.1:76149824-76149843 | None:intergenic | 30.0% | |
| GAAAAGGATTATGAAGAAGT+TGG | - | chr1.1:76151909-76151928 | MS.gene93402:CDS | 30.0% | |
| TGTAATATTTGTGAAATCGC+TGG | - | chr1.1:76149884-76149903 | MS.gene93402:CDS | 30.0% | |
| ! | CATATGAAGAAAGCATGAAA+TGG | + | chr1.1:76151422-76151441 | None:intergenic | 30.0% |
| ! | GAATTCTTGTTTGAATCTTG+CGG | - | chr1.1:76149988-76150007 | MS.gene93402:CDS | 30.0% |
| ! | TTTGTTATATGCGTTTCTCT+AGG | - | chr1.1:76149669-76149688 | MS.gene93402:CDS | 30.0% |
| !! | GTTCCTATTTTTCAGATCTA+AGG | - | chr1.1:76149724-76149743 | MS.gene93402:CDS | 30.0% |
| !!! | TTTTTGGTTTTCAATGCTGT+TGG | - | chr1.1:76150908-76150927 | MS.gene93402:CDS | 30.0% |
| AAGATCTACAAAAACAGCAC+GGG | + | chr1.1:76150600-76150619 | None:intergenic | 35.0% | |
| AAGCTATCTATGACATCTGT+AGG | - | chr1.1:76151125-76151144 | MS.gene93402:intron | 35.0% | |
| ACATACTGGTATAATGACCA+CGG | + | chr1.1:76150724-76150743 | None:intergenic | 35.0% | |
| ATGGAAAGAAATCCAAGCTT+GGG | - | chr1.1:76150987-76151006 | MS.gene93402:intron | 35.0% | |
| CAAGATCTACAAAAACAGCA+CGG | + | chr1.1:76150601-76150620 | None:intergenic | 35.0% | |
| CATTGAAAACCAAAAACCCT+TGG | + | chr1.1:76150904-76150923 | None:intergenic | 35.0% | |
| GATTTCAAACTCAACAAGTG+TGG | - | chr1.1:76151755-76151774 | MS.gene93402:intron | 35.0% | |
| TATGGAAAGAAATCCAAGCT+TGG | - | chr1.1:76150986-76151005 | MS.gene93402:intron | 35.0% | |
| ! | AGAAAGCATGAAATGGATTC+TGG | + | chr1.1:76151415-76151434 | None:intergenic | 35.0% |
| ! | GAAAGCATGAAATGGATTCT+GGG | + | chr1.1:76151414-76151433 | None:intergenic | 35.0% |
| ! | TTTTGAGCCATCATCTATGA+TGG | - | chr1.1:76151509-76151528 | MS.gene93402:intron | 35.0% |
| !! | ATGAAATGGATTCTGGGATA+TGG | + | chr1.1:76151408-76151427 | None:intergenic | 35.0% |
| !! | TGAAATGGATTCTGGGATAT+GGG | + | chr1.1:76151407-76151426 | None:intergenic | 35.0% |
| AAACCTCAAAGAAGCAGTCA+AGG | + | chr1.1:76151337-76151356 | None:intergenic | 40.0% | |
| AGAAACAAGACGGTTAAGGT+TGG | + | chr1.1:76151182-76151201 | None:intergenic | 40.0% | |
| AGAGATCGTTGATCTGTGTT+TGG | - | chr1.1:76150841-76150860 | MS.gene93402:CDS | 40.0% | |
| AGATCTACAAAAACAGCACG+GGG | + | chr1.1:76150599-76150618 | None:intergenic | 40.0% | |
| ATACCACACTTGAAACCAGT+AGG | + | chr1.1:76151669-76151688 | None:intergenic | 40.0% | |
| ATAGACAGTAAACCCAAGCT+TGG | + | chr1.1:76151002-76151021 | None:intergenic | 40.0% | |
| CACTTAGCCATCATAGATGA+TGG | + | chr1.1:76151519-76151538 | None:intergenic | 40.0% | |
| CATACTGGTATAATGACCAC+GGG | + | chr1.1:76150723-76150742 | None:intergenic | 40.0% | |
| GAGTGCATTTCAGTTCACAT+CGG | - | chr1.1:76149534-76149553 | MS.gene93402:CDS | 40.0% | |
| GCATTTGTTCACTGGTATGT+GGG | - | chr1.1:76151831-76151850 | MS.gene93402:intron | 40.0% | |
| GTTGTGAGTTAGAGACATAC+TGG | + | chr1.1:76150738-76150757 | None:intergenic | 40.0% | |
| TACCACACTTGAAACCAGTA+GGG | + | chr1.1:76151668-76151687 | None:intergenic | 40.0% | |
| TAGCTACCTGAGAAACAAGA+CGG | + | chr1.1:76151192-76151211 | None:intergenic | 40.0% | |
| TCCAGTTATATCTGCTGAGA+AGG | - | chr1.1:76151443-76151462 | MS.gene93402:intron | 40.0% | |
| TCGCTACAATCAAAACCAAG+AGG | - | chr1.1:76151619-76151638 | MS.gene93402:intron | 40.0% | |
| TGCATTTGTTCACTGGTATG+TGG | - | chr1.1:76151830-76151849 | MS.gene93402:intron | 40.0% | |
| TTCTTATATGCACAGCCTGA+TGG | - | chr1.1:76150488-76150507 | MS.gene93402:CDS | 40.0% | |
| !! | ACTGCTTCTTTGAGGTTTGA+TGG | - | chr1.1:76151339-76151358 | MS.gene93402:intron | 40.0% |
| !! | TTGGTTTTCAATGCTGTTGG+AGG | - | chr1.1:76150911-76150930 | MS.gene93402:CDS | 40.0% |
| AAACTCAACAAGTGTGGCTG+AGG | - | chr1.1:76151761-76151780 | MS.gene93402:intron | 45.0% | |
| AACATCAGTGTGCTCCAAGA+GGG | + | chr1.1:76151086-76151105 | None:intergenic | 45.0% | |
| ACAGCAGCATTCACATCCTT+GGG | + | chr1.1:76151600-76151619 | None:intergenic | 45.0% | |
| AGCAAGCCATGTACTTTCCA+TGG | + | chr1.1:76151551-76151570 | None:intergenic | 45.0% | |
| AGCATTTCCGACCTGAATAC+CGG | + | chr1.1:76149565-76149584 | None:intergenic | 45.0% | |
| CAAGAGGACCATTCAGTTTG+TGG | - | chr1.1:76151635-76151654 | MS.gene93402:intron | 45.0% | |
| CACAAACTGAATGGTCCTCT+TGG | + | chr1.1:76151637-76151656 | None:intergenic | 45.0% | |
| CATCCTTGACTGCTTCTTTG+AGG | - | chr1.1:76151331-76151350 | MS.gene93402:intron | 45.0% | |
| CCTGAGAAACAAGACGGTTA+AGG | + | chr1.1:76151186-76151205 | None:intergenic | 45.0% | |
| CTCACCTCATCGATAACAGT+GGG | + | chr1.1:76150626-76150645 | None:intergenic | 45.0% | |
| GACTGAATTCCAGACCAACT+TGG | - | chr1.1:76151380-76151399 | MS.gene93402:intron | 45.0% | |
| GAGCTTTACTGTCTCGAACA+CGG | - | chr1.1:76149591-76149610 | MS.gene93402:CDS | 45.0% | |
| GATCTACAAAAACAGCACGG+GGG | + | chr1.1:76150598-76150617 | None:intergenic | 45.0% | |
| GCACCAATCCACAAACTGAA+TGG | + | chr1.1:76151646-76151665 | None:intergenic | 45.0% | |
| GCCTTCTCAGCAGATATAAC+TGG | + | chr1.1:76151447-76151466 | None:intergenic | 45.0% | |
| GGACCATTCAGTTTGTGGAT+TGG | - | chr1.1:76151640-76151659 | MS.gene93402:intron | 45.0% | |
| GTTGTATGGCTCAACAACAG+AGG | + | chr1.1:76151044-76151063 | None:intergenic | 45.0% | |
| TATCCGCAAGCTTTCTGATG+CGG | + | chr1.1:76150868-76150887 | None:intergenic | 45.0% | |
| TGACCTTGCTAAGGTACAGA+GGG | - | chr1.1:76151722-76151741 | MS.gene93402:intron | 45.0% | |
| ! | ATAACTGCACTGGTCTCCAA+GGG | - | chr1.1:76150885-76150904 | MS.gene93402:CDS | 45.0% |
| ! | CACTGATGTTGCTGTTCTTC+TGG | - | chr1.1:76151096-76151115 | MS.gene93402:intron | 45.0% |
| ! | GAGCGTCTGTCTGTTGATTA+TGG | - | chr1.1:76150968-76150987 | MS.gene93402:CDS | 45.0% |
| ! | GTTTTCAATGCTGTTGGAGG+AGG | - | chr1.1:76150914-76150933 | MS.gene93402:CDS | 45.0% |
| !! | ACGGTTAAGGTTGGTGTAAG+TGG | + | chr1.1:76151173-76151192 | None:intergenic | 45.0% |
| !! | CCTTAACCGTCTTGTTTCTC+AGG | - | chr1.1:76151183-76151202 | MS.gene93402:intron | 45.0% |
| !! | CGGTTAAGGTTGGTGTAAGT+GGG | + | chr1.1:76151172-76151191 | None:intergenic | 45.0% |
| !! | GGATCTTGCTGCTTTGGAAA+AGG | - | chr1.1:76151893-76151912 | MS.gene93402:CDS | 45.0% |
| !! | TGATGGCTCAAAAGCACTGT+TGG | + | chr1.1:76151502-76151521 | None:intergenic | 45.0% |
| AACACCTTCTTCAGCGAGAC+TGG | - | chr1.1:76150557-76150576 | MS.gene93402:CDS | 50.0% | |
| AACAGAGGTGGAAACCTGAG+GGG | + | chr1.1:76151029-76151048 | None:intergenic | 50.0% | |
| AAGCTTGCGGATAACTGCAC+TGG | - | chr1.1:76150875-76150894 | MS.gene93402:CDS | 50.0% | |
| AATGCTGTTGGAGGAGGAAC+CGG | - | chr1.1:76150920-76150939 | MS.gene93402:CDS | 50.0% | |
| ACAACAGAGGTGGAAACCTG+AGG | + | chr1.1:76151031-76151050 | None:intergenic | 50.0% | |
| AGTGACAAGACTGTTGGAGG+CGG | - | chr1.1:76150521-76150540 | MS.gene93402:CDS | 50.0% | |
| ATGACCACGGGCAAAGTTGT+TGG | + | chr1.1:76150711-76150730 | None:intergenic | 50.0% | |
| ATGCCGAGTGACAAGACTGT+TGG | - | chr1.1:76150515-76150534 | MS.gene93402:CDS | 50.0% | |
| CAAAGCAGCAAGATCCTCAC+GGG | + | chr1.1:76151889-76151908 | None:intergenic | 50.0% | |
| CAACAGAGGTGGAAACCTGA+GGG | + | chr1.1:76151030-76151049 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCCAAG+AGG | + | chr1.1:76151087-76151106 | None:intergenic | 50.0% | |
| CAGAGAACCAAGACCAGAAC+CGG | + | chr1.1:76150942-76150961 | None:intergenic | 50.0% | |
| CCAAAGCAGCAAGATCCTCA+CGG | + | chr1.1:76151890-76151909 | None:intergenic | 50.0% | |
| CCAAGCGTGCATTTGTTCAC+TGG | - | chr1.1:76151823-76151842 | MS.gene93402:intron | 50.0% | |
| CCACTGTTATCGATGAGGTG+AGG | - | chr1.1:76150624-76150643 | MS.gene93402:CDS | 50.0% | |
| CCAGTGAACAAATGCACGCT+TGG | + | chr1.1:76151826-76151845 | None:intergenic | 50.0% | |
| CCATGTACTTTCCATGGCGA+GGG | + | chr1.1:76151545-76151564 | None:intergenic | 50.0% | |
| CCTCACCTCATCGATAACAG+TGG | + | chr1.1:76150627-76150646 | None:intergenic | 50.0% | |
| CCTTGGGAACAACATCACCT+CGG | + | chr1.1:76151584-76151603 | None:intergenic | 50.0% | |
| GACAGCAGCATTCACATCCT+TGG | + | chr1.1:76151601-76151620 | None:intergenic | 50.0% | |
| GTATGGCTCAACAACAGAGG+TGG | + | chr1.1:76151041-76151060 | None:intergenic | 50.0% | |
| GTGACCTTGCTAAGGTACAG+AGG | - | chr1.1:76151721-76151740 | MS.gene93402:intron | 50.0% | |
| GTGGAGAGGACACTGTTGTA+TGG | + | chr1.1:76151058-76151077 | None:intergenic | 50.0% | |
| GTTATCGATGAGGTGAGGAC+TGG | - | chr1.1:76150629-76150648 | MS.gene93402:CDS | 50.0% | |
| GTTCACTGGTATGTGGGTGA+GGG | - | chr1.1:76151837-76151856 | MS.gene93402:intron | 50.0% | |
| TACTGTCTCGAACACGGCAT+CGG | - | chr1.1:76149597-76149616 | MS.gene93402:CDS | 50.0% | |
| TCACCACCAGGAACAACAGT+AGG | + | chr1.1:76151705-76151724 | None:intergenic | 50.0% | |
| TCAGGTCGGAAATGCTTGCT+GGG | - | chr1.1:76149569-76149588 | MS.gene93402:CDS | 50.0% | |
| TCAGTTCACATCGGTCAAGC+CGG | - | chr1.1:76149543-76149562 | MS.gene93402:CDS | 50.0% | |
| TGAGCCCACTGTTATCGATG+AGG | - | chr1.1:76150619-76150638 | MS.gene93402:CDS | 50.0% | |
| TGAGGGCGGTGATGAAGATA+TGG | - | chr1.1:76151944-76151963 | MS.gene93402:CDS | 50.0% | |
| TGTTCACTGGTATGTGGGTG+AGG | - | chr1.1:76151836-76151855 | MS.gene93402:intron | 50.0% | |
| TTCAGGTCGGAAATGCTTGC+TGG | - | chr1.1:76149568-76149587 | MS.gene93402:CDS | 50.0% | |
| ! | ACAAGTGTGGCTGAGGTGTT+TGG | - | chr1.1:76151768-76151787 | MS.gene93402:intron | 50.0% |
| ! | AGAATTTTCCGAAGCCCGTG+AGG | - | chr1.1:76151872-76151891 | MS.gene93402:intron | 50.0% |
| ! | CAGTCTTGTCACTCGGCATT+TGG | + | chr1.1:76150514-76150533 | None:intergenic | 50.0% |
| ! | CCTCCAACAGTCTTGTCACT+CGG | + | chr1.1:76150521-76150540 | None:intergenic | 50.0% |
| ! | GATAACTGCACTGGTCTCCA+AGG | - | chr1.1:76150884-76150903 | MS.gene93402:CDS | 50.0% |
| ! | TCTGGGATATGGGACCAAGT+TGG | + | chr1.1:76151397-76151416 | None:intergenic | 50.0% |
| !! | CACTGGTCTCCAAGGGTTTT+TGG | - | chr1.1:76150892-76150911 | MS.gene93402:CDS | 50.0% |
| !! | GATATGGGACCAAGTTGGTC+TGG | + | chr1.1:76151392-76151411 | None:intergenic | 50.0% |
| !! | GCTTGCTGTTTGATGTACCG+AGG | - | chr1.1:76151564-76151583 | MS.gene93402:intron | 50.0% |
| !! | TGCCCTACTGGTTTCAAGTG+TGG | - | chr1.1:76151663-76151682 | MS.gene93402:intron | 50.0% |
| !! | TTTGTGGATTGGTGCCCTAC+TGG | - | chr1.1:76151651-76151670 | MS.gene93402:intron | 50.0% |
| AAGTGGGACGCTCAATGTCG+AGG | + | chr1.1:76151156-76151175 | None:intergenic | 55.0% | |
| ACCACGGGCAAAGTTGTTGG+CGG | + | chr1.1:76150708-76150727 | None:intergenic | 55.0% | |
| ACCTTAGCAAGGTCACCACC+AGG | + | chr1.1:76151717-76151736 | None:intergenic | 55.0% | |
| AGCAAGATCCTCACGGGCTT+CGG | + | chr1.1:76151883-76151902 | None:intergenic | 55.0% | |
| AGCACCAGTCTCGCTGAAGA+AGG | + | chr1.1:76150564-76150583 | None:intergenic | 55.0% | |
| AGGATGGAAGAGCTGGCGAT+AGG | + | chr1.1:76150657-76150676 | None:intergenic | 55.0% | |
| AGTGGGACGCTCAATGTCGA+GGG | + | chr1.1:76151155-76151174 | None:intergenic | 55.0% | |
| AGTGTGCTCCAAGAGGGAGT+GGG | + | chr1.1:76151080-76151099 | None:intergenic | 55.0% | |
| CACTGATGAGCTGCTCAGGA+TGG | + | chr1.1:76150673-76150692 | None:intergenic | 55.0% | |
| CAGCCACCTACTGTTGTTCC+TGG | - | chr1.1:76151696-76151715 | MS.gene93402:intron | 55.0% | |
| CATCCTGAGCAGCTCATCAG+TGG | - | chr1.1:76150671-76150690 | MS.gene93402:intron | 55.0% | |
| CATCGGTCAAGCCGGTATTC+AGG | - | chr1.1:76149551-76149570 | MS.gene93402:CDS | 55.0% | |
| CCACCAGGAACAACAGTAGG+TGG | + | chr1.1:76151702-76151721 | None:intergenic | 55.0% | |
| CCACCTACTGTTGTTCCTGG+TGG | - | chr1.1:76151699-76151718 | MS.gene93402:intron | 55.0% | |
| CCGAGGTGATGTTGTTCCCA+AGG | - | chr1.1:76151581-76151600 | MS.gene93402:intron | 55.0% | |
| CCGAGTGACAAGACTGTTGG+AGG | - | chr1.1:76150518-76150537 | MS.gene93402:CDS | 55.0% | |
| CTGCCCTCTGTACCTTAGCA+AGG | + | chr1.1:76151728-76151747 | None:intergenic | 55.0% | |
| CTGGTATGTGGGTGAGGGTA+TGG | - | chr1.1:76151842-76151861 | MS.gene93402:intron | 55.0% | |
| GCCATGTACTTTCCATGGCG+AGG | + | chr1.1:76151546-76151565 | None:intergenic | 55.0% | |
| GGACCGCATCAGAAAGCTTG+CGG | - | chr1.1:76150862-76150881 | MS.gene93402:CDS | 55.0% | |
| GGTCAAGCCGGTATTCAGGT+CGG | - | chr1.1:76149555-76149574 | MS.gene93402:CDS | 55.0% | |
| TACTGTCTATCCCTCCCCTC+AGG | - | chr1.1:76151012-76151031 | MS.gene93402:intron | 55.0% | |
| TCACTCGGCATTTGGCCATC+AGG | + | chr1.1:76150506-76150525 | None:intergenic | 55.0% | |
| TTCTTCAGCGAGACTGGTGC+TGG | - | chr1.1:76150563-76150582 | MS.gene93402:CDS | 55.0% | |
| TTGCCACTGATGAGCTGCTC+AGG | + | chr1.1:76150677-76150696 | None:intergenic | 55.0% | |
| ! | CCCTCGCCATGGAAAGTACA+TGG | - | chr1.1:76151542-76151561 | MS.gene93402:intron | 55.0% |
| ! | CCGTGAGGATCTTGCTGCTT+TGG | - | chr1.1:76151887-76151906 | MS.gene93402:CDS | 55.0% |
| ! | GTGGGTGAGGGTATGGAAGA+AGG | - | chr1.1:76151849-76151868 | MS.gene93402:intron | 55.0% |
| ! | TCCTGGTGGTGACCTTGCTA+AGG | - | chr1.1:76151713-76151732 | MS.gene93402:intron | 55.0% |
| !! | GAAGAAGTTGGTGCCGAGTC+TGG | - | chr1.1:76151921-76151940 | MS.gene93402:CDS | 55.0% |
| AGAGGTGGAAACCTGAGGGG+AGG | + | chr1.1:76151026-76151045 | None:intergenic | 60.0% | |
| ATCACCGCCCTCACCAGACT+CGG | + | chr1.1:76151937-76151956 | None:intergenic | 60.0% | |
| CAGTGTGCTCCAAGAGGGAG+TGG | + | chr1.1:76151081-76151100 | None:intergenic | 60.0% | |
| GAGGTGGAAACCTGAGGGGA+GGG | + | chr1.1:76151025-76151044 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr1.1:76151531-76151550 | MS.gene93402:intron | 60.0% | |
| GCTGCTCAGGATGGAAGAGC+TGG | + | chr1.1:76150664-76150683 | None:intergenic | 60.0% | |
| ! | GGAGGAACCGGTTCTGGTCT+TGG | - | chr1.1:76150932-76150951 | MS.gene93402:CDS | 60.0% |
| ! | GTTGGAGGAGGAACCGGTTC+TGG | - | chr1.1:76150926-76150945 | MS.gene93402:CDS | 60.0% |
| !! | AGTTGGTGCCGAGTCTGGTG+AGG | - | chr1.1:76151926-76151945 | MS.gene93402:CDS | 60.0% |
| !! | GTTGGTGCCGAGTCTGGTGA+GGG | - | chr1.1:76151927-76151946 | MS.gene93402:CDS | 60.0% |
| CCAAGAGGGAGTGGGTGGAG+AGG | + | chr1.1:76151072-76151091 | None:intergenic | 65.0% | |
| CCTCTCCACCCACTCCCTCT+TGG | - | chr1.1:76151069-76151088 | MS.gene93402:intron | 65.0% | |
| GCCGCCAACAACTTTGCCCG+TGG | - | chr1.1:76150704-76150723 | MS.gene93402:intron | 65.0% | |
| GTGCTCCAAGAGGGAGTGGG+TGG | + | chr1.1:76151077-76151096 | None:intergenic | 65.0% | |
| ! | GGTGCCGAGTCTGGTGAGGG+CGG | - | chr1.1:76151930-76151949 | MS.gene93402:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76149528 | 76151977 | 76149528 | ID=MS.gene93402 |
| chr1.1 | mRNA | 76149528 | 76151977 | 76149528 | ID=MS.gene93402.t1;Parent=MS.gene93402 |
| chr1.1 | exon | 76151885 | 76151977 | 76151885 | ID=MS.gene93402.t1.exon1;Parent=MS.gene93402.t1 |
| chr1.1 | CDS | 76151885 | 76151977 | 76151885 | ID=cds.MS.gene93402.t1;Parent=MS.gene93402.t1 |
| chr1.1 | exon | 76150768 | 76151002 | 76150768 | ID=MS.gene93402.t1.exon2;Parent=MS.gene93402.t1 |
| chr1.1 | CDS | 76150768 | 76151002 | 76150768 | ID=cds.MS.gene93402.t1;Parent=MS.gene93402.t1 |
| chr1.1 | exon | 76150301 | 76150671 | 76150301 | ID=MS.gene93402.t1.exon3;Parent=MS.gene93402.t1 |
| chr1.1 | CDS | 76150301 | 76150671 | 76150301 | ID=cds.MS.gene93402.t1;Parent=MS.gene93402.t1 |
| chr1.1 | exon | 76149528 | 76150181 | 76149528 | ID=MS.gene93402.t1.exon4;Parent=MS.gene93402.t1 |
| chr1.1 | CDS | 76149528 | 76150181 | 76149528 | ID=cds.MS.gene93402.t1;Parent=MS.gene93402.t1 |
| Gene Sequence |
| Protein sequence |
