Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059893.t1 | XP_013464773.1 | 96 | 75 | 3 | 0 | 1 | 75 | 12 | 86 | 1.60E-35 | 158.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059893.t1 | A0A072VBK6 | 96.0 | 75 | 3 | 0 | 1 | 75 | 12 | 86 | 1.2e-35 | 158.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059893 | MS.gene24054 | 0.802363 | 5.81E-49 | -1.69E-46 |
MS.gene059893 | MS.gene48048 | 0.802725 | 4.90E-49 | -1.69E-46 |
MS.gene059893 | MS.gene88367 | 0.888833 | 4.16E-73 | -1.69E-46 |
MS.gene059893 | MS.gene88892 | 0.842732 | 2.16E-58 | -1.69E-46 |
MS.gene059893 | MS.gene95856 | 0.812968 | 3.25E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059893.t1 | MTR_2g080270 | 92.308 | 78 | 6 | 0 | 1 | 78 | 12 | 89 | 3.90e-51 | 157 |
MS.gene059893.t1 | MTR_4g046033 | 62.500 | 80 | 27 | 1 | 2 | 78 | 10 | 89 | 5.59e-33 | 110 |
MS.gene059893.t1 | MTR_2g080270 | 94.000 | 50 | 3 | 0 | 1 | 50 | 12 | 61 | 9.72e-31 | 104 |
MS.gene059893.t1 | MTR_2g080270 | 95.833 | 48 | 2 | 0 | 1 | 48 | 12 | 59 | 6.71e-30 | 102 |
MS.gene059893.t1 | MTR_2g080270 | 92.000 | 50 | 4 | 0 | 1 | 50 | 12 | 61 | 8.33e-30 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059893.t1 | AT2G20820 | 57.746 | 71 | 29 | 1 | 4 | 74 | 17 | 86 | 9.64e-24 | 87.8 |
Find 40 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAACGAGTGAAGCGGATT+TGG | 0.264875 | 2.2:+15116477 | None:intergenic |
TGTTCTTCTTTCCACTTAGA+TGG | 0.309402 | 2.2:+15115268 | None:intergenic |
TCCTGCCAAATGTTCACCTT+TGG | 0.375750 | 2.2:+15115301 | None:intergenic |
TGAACGAGTGAAGCGGATTT+GGG | 0.376003 | 2.2:+15116478 | None:intergenic |
TACCGGCGTTATTGCGGCGC+GGG | 0.388346 | 2.2:-15114524 | MS.gene059893:CDS |
TTTGTGATTGCTTCTTTGAC+TGG | 0.396668 | 2.2:-15114761 | MS.gene059893:CDS |
CGCGGCATGGCTGGTTCCTC+CGG | 0.398709 | 2.2:-15116451 | MS.gene059893:intron |
GTTCATCGCCGCGGCATGGC+TGG | 0.417524 | 2.2:-15116460 | MS.gene059893:CDS |
GAACTCCAAAGGTGAACATT+TGG | 0.428445 | 2.2:-15115306 | MS.gene059893:CDS |
TGATTGCTTCTTTGACTGGA+TGG | 0.428585 | 2.2:-15114757 | MS.gene059893:CDS |
GCGCTACAAGGCGGAGCGCT+TGG | 0.430725 | 2.2:-15114473 | MS.gene059893:CDS |
CGCCGCAATAACGCCGGTAG+TGG | 0.442557 | 2.2:+15114528 | None:intergenic |
GGATGGACTTTACTCTTCTA+CGG | 0.478552 | 2.2:-15114740 | MS.gene059893:CDS |
ACTCGTTCATCGCCGCGGCA+TGG | 0.488087 | 2.2:-15116464 | MS.gene059893:CDS |
GGCGGAGCGCTTGGAGAAAG+CGG | 0.496259 | 2.2:-15114464 | MS.gene059893:CDS |
GGCGTTATTGCGGCGCGGGG+CGG | 0.498814 | 2.2:-15114520 | MS.gene059893:CDS |
GGTGGTTACAAGTTCTTCAC+TGG | 0.518333 | 2.2:-15114719 | MS.gene059893:CDS |
TCCAAAGGTGAACATTTGGC+AGG | 0.544619 | 2.2:-15115302 | MS.gene059893:CDS |
GCCCCGCGCCGCAATAACGC+CGG | 0.548116 | 2.2:+15114522 | None:intergenic |
AAACGCGACGCAGCGCTACA+AGG | 0.552023 | 2.2:-15114485 | MS.gene059893:CDS |
GAGTGAAGCGGATTTGGGTG+AGG | 0.556913 | 2.2:+15116483 | None:intergenic |
TTGTCAATAGCAACCACTAC+CGG | 0.558615 | 2.2:-15114541 | MS.gene059893:CDS |
TGTTGCATTGTAGATCCTCA+TGG | 0.559182 | 2.2:-15115328 | MS.gene059893:intron |
CACTGGTGGCAAGAAGGAAG+AGG | 0.561461 | 2.2:-15114702 | MS.gene059893:intron |
GTTCTTCACTGGTGGCAAGA+AGG | 0.577858 | 2.2:-15114708 | MS.gene059893:CDS |
ATCCACTGTCTCCATCTAAG+TGG | 0.589737 | 2.2:-15115279 | MS.gene059893:CDS |
ACCGGCGTTATTGCGGCGCG+GGG | 0.590852 | 2.2:-15114523 | MS.gene059893:CDS |
AACCACTACCGGCGTTATTG+CGG | 0.592493 | 2.2:-15114530 | MS.gene059893:CDS |
CGGAGGAACCAGCCATGCCG+CGG | 0.602802 | 2.2:+15116452 | None:intergenic |
TGGACTTTACTCTTCTACGG+TGG | 0.603616 | 2.2:-15114737 | MS.gene059893:CDS |
TTCCACTTAGATGGAGACAG+TGG | 0.611790 | 2.2:+15115277 | None:intergenic |
CGCGACGCAGCGCTACAAGG+CGG | 0.614415 | 2.2:-15114482 | MS.gene059893:CDS |
GGTTACAAGTTCTTCACTGG+TGG | 0.620304 | 2.2:-15114716 | MS.gene059893:CDS |
AAGCGGATTTGGGTGAGGAG+AGG | 0.632963 | 2.2:+15116488 | None:intergenic |
CTACCGGCGTTATTGCGGCG+CGG | 0.635436 | 2.2:-15114525 | MS.gene059893:CDS |
GCGGCGATGAACGAGTGAAG+CGG | 0.636022 | 2.2:+15116471 | None:intergenic |
AGATCCTCATGGAACTCCAA+AGG | 0.652118 | 2.2:-15115317 | MS.gene059893:CDS |
TTCACCTTTGGAGTTCCATG+AGG | 0.661225 | 2.2:+15115313 | None:intergenic |
GCTCGGCAAGCAATGAACGT+CGG | 0.679714 | 2.2:-15116514 | None:intergenic |
GCTTCACTCGTTCATCGCCG+CGG | 0.699867 | 2.2:-15116469 | MS.gene059893:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATTTTAATTTTTAACCAT+TGG | - | chr2.2:15115531-15115550 | MS.gene059893:intron | 15.0% |
!!! | TTTTTTGTAGAGATTAAATT+GGG | - | chr2.2:15114832-15114851 | MS.gene059893:intron | 15.0% |
!! | TAAATTAATCAAGAAAGAAG+AGG | + | chr2.2:15115593-15115612 | None:intergenic | 20.0% |
!!! | AGCTCTTGATTTTAATTTTT+AGG | - | chr2.2:15116377-15116396 | MS.gene059893:intron | 20.0% |
!!! | AGCTTTATAAAGTAAAATCA+CGG | + | chr2.2:15116361-15116380 | None:intergenic | 20.0% |
!!! | GTTTTTTGTAGAGATTAAAT+TGG | - | chr2.2:15114831-15114850 | MS.gene059893:intron | 20.0% |
!!! | TATTTTAGTCTTAAACAAAC+AGG | - | chr2.2:15115915-15115934 | MS.gene059893:intron | 20.0% |
!!! | TGTATTTTATACAGATGTTA+AGG | - | chr2.2:15114788-15114807 | MS.gene059893:intron | 20.0% |
! | AATTCATCGAATTTCCTATA+AGG | + | chr2.2:15116298-15116317 | None:intergenic | 25.0% |
! | ACAAAAAGTAATACCAAACT+AGG | - | chr2.2:15114687-15114706 | MS.gene059893:intron | 25.0% |
! | GAACTTATATGCTAAAAAAG+GGG | - | chr2.2:15115499-15115518 | MS.gene059893:intron | 25.0% |
! | GGAACTTATATGCTAAAAAA+GGG | - | chr2.2:15115498-15115517 | MS.gene059893:intron | 25.0% |
! | TGGAACTTATATGCTAAAAA+AGG | - | chr2.2:15115497-15115516 | MS.gene059893:intron | 25.0% |
! | TGTTAACATGCAAAAATTCT+GGG | - | chr2.2:15115128-15115147 | MS.gene059893:intron | 25.0% |
!! | AGGATCTAACATTTTCAAAT+TGG | - | chr2.2:15114712-15114731 | MS.gene059893:CDS | 25.0% |
!! | GATCTAACATTTTCAAATTG+GGG | - | chr2.2:15114714-15114733 | MS.gene059893:CDS | 25.0% |
!! | GGATCTAACATTTTCAAATT+GGG | - | chr2.2:15114713-15114732 | MS.gene059893:CDS | 25.0% |
!! | TTTGAAATTTACAGTGATGA+CGG | + | chr2.2:15114571-15114590 | None:intergenic | 25.0% |
AAAGTAAAATCACGGTAACA+AGG | + | chr2.2:15116353-15116372 | None:intergenic | 30.0% | |
AACTGTAACAACAAAAGACT+TGG | + | chr2.2:15116183-15116202 | None:intergenic | 30.0% | |
AAGTAATACCAAACTAGGAT+AGG | - | chr2.2:15114692-15114711 | MS.gene059893:intron | 30.0% | |
AATGTCTCAGAATCAAAATG+AGG | + | chr2.2:15115780-15115799 | None:intergenic | 30.0% | |
AGAGATCTTAAACTAGAAAG+AGG | + | chr2.2:15115747-15115766 | None:intergenic | 30.0% | |
ATGAACAAATGAGAGTGATT+TGG | + | chr2.2:15114603-15114622 | None:intergenic | 30.0% | |
CTCTACTCAGTAAATTATTG+TGG | - | chr2.2:15114891-15114910 | MS.gene059893:intron | 30.0% | |
GAGATCTTAAACTAGAAAGA+GGG | + | chr2.2:15115746-15115765 | None:intergenic | 30.0% | |
GCAACATGTCGAATTAATAT+AGG | + | chr2.2:15115620-15115639 | None:intergenic | 30.0% | |
GCTTATTATTGTCTTCTCTT+TGG | - | chr2.2:15115465-15115484 | MS.gene059893:intron | 30.0% | |
GTGTTAACATGCAAAAATTC+TGG | - | chr2.2:15115127-15115146 | MS.gene059893:intron | 30.0% | |
TGATATGTGGAATGATATTC+AGG | - | chr2.2:15115310-15115329 | MS.gene059893:CDS | 30.0% | |
TGCGTAAGGATAATTATATC+AGG | + | chr2.2:15115980-15115999 | None:intergenic | 30.0% | |
! | GGGTTGTTAGAAAATTTTGA+GGG | - | chr2.2:15114852-15114871 | MS.gene059893:intron | 30.0% |
! | TAATTATATCAGGAGTGTAC+AGG | + | chr2.2:15115970-15115989 | None:intergenic | 30.0% |
! | TGGGTTGTTAGAAAATTTTG+AGG | - | chr2.2:15114851-15114870 | MS.gene059893:intron | 30.0% |
! | TTTTCATATGCTATTCCAGA+TGG | - | chr2.2:15114990-15115009 | MS.gene059893:intron | 30.0% |
!! | TAGTAAAGGCATTGCAATTT+AGG | - | chr2.2:15115346-15115365 | MS.gene059893:intron | 30.0% |
!!! | GTTTGGTATTACTTTTTGTC+AGG | + | chr2.2:15114686-15114705 | None:intergenic | 30.0% |
AAATTGTCAAGGACGGAATT+AGG | + | chr2.2:15114644-15114663 | None:intergenic | 35.0% | |
ACAGAAGGAATGTACATACT+AGG | - | chr2.2:15115431-15115450 | MS.gene059893:intron | 35.0% | |
AGCCTATTCTTCAATCAAAG+AGG | + | chr2.2:15115047-15115066 | None:intergenic | 35.0% | |
AGTGTTAGACTCATCCAATT+TGG | - | chr2.2:15115287-15115306 | MS.gene059893:CDS | 35.0% | |
AGTTGTTGCATCTTAACTTC+TGG | - | chr2.2:15115202-15115221 | MS.gene059893:intron | 35.0% | |
CAACGTAAGCAACTTCTTAA+TGG | - | chr2.2:15115842-15115861 | MS.gene059893:intron | 35.0% | |
CATTACTCAATCTTCTTCCT+TGG | + | chr2.2:15116075-15116094 | None:intergenic | 35.0% | |
CATTCCACATATCACCAAAT+TGG | + | chr2.2:15115304-15115323 | None:intergenic | 35.0% | |
CTTCTCTTTGGCTATGAAAA+TGG | - | chr2.2:15115477-15115496 | MS.gene059893:intron | 35.0% | |
GAATCACGTTGTTGTAGTAA+AGG | - | chr2.2:15115332-15115351 | MS.gene059893:intron | 35.0% | |
GAGTAGAGAAAGACTCAATT+TGG | + | chr2.2:15114879-15114898 | None:intergenic | 35.0% | |
GCCTATTCTTCAATCAAAGA+GGG | + | chr2.2:15115046-15115065 | None:intergenic | 35.0% | |
TCCCTCTTTGATTGAAGAAT+AGG | - | chr2.2:15115042-15115061 | MS.gene059893:intron | 35.0% | |
TGATCTACAATGCAAACAGA+AGG | - | chr2.2:15115416-15115435 | MS.gene059893:intron | 35.0% | |
TGTTAGATCCTATCCTAGTT+TGG | + | chr2.2:15114703-15114722 | None:intergenic | 35.0% | |
TGTTCTTCTTTCCACTTAGA+TGG | + | chr2.2:15115697-15115716 | None:intergenic | 35.0% | |
TTAAACAAACAGGCCCTTAA+GGG | - | chr2.2:15115925-15115944 | MS.gene059893:intron | 35.0% | |
TTGCATCTTAACTTCTGGTA+GGG | - | chr2.2:15115207-15115226 | MS.gene059893:intron | 35.0% | |
TTGTTCACTATATGTGCGTA+AGG | + | chr2.2:15115994-15116013 | None:intergenic | 35.0% | |
TTTGTGATTGCTTCTTTGAC+TGG | - | chr2.2:15116201-15116220 | MS.gene059893:intron | 35.0% | |
! | CAACTACGCAATGATGATTT+TGG | + | chr2.2:15115187-15115206 | None:intergenic | 35.0% |
! | TCATCCAATTTGGTGATATG+TGG | - | chr2.2:15115297-15115316 | MS.gene059893:CDS | 35.0% |
!! | ATTTACAGTGATGACGGAAA+AGG | + | chr2.2:15114565-15114584 | None:intergenic | 35.0% |
ACAGATAACAATGAGCCATC+TGG | + | chr2.2:15115008-15115027 | None:intergenic | 40.0% | |
ACTGTTCTCAAGTTCCCTTA+AGG | + | chr2.2:15115942-15115961 | None:intergenic | 40.0% | |
CACGAGAAAATTGTCAAGGA+CGG | + | chr2.2:15114651-15114670 | None:intergenic | 40.0% | |
CTGTTCTCAAGTTCCCTTAA+GGG | + | chr2.2:15115941-15115960 | None:intergenic | 40.0% | |
CTTAAACAAACAGGCCCTTA+AGG | - | chr2.2:15115924-15115943 | MS.gene059893:intron | 40.0% | |
GAACCACGAGAAAATTGTCA+AGG | + | chr2.2:15114655-15114674 | None:intergenic | 40.0% | |
GAACTCCAAAGGTGAACATT+TGG | - | chr2.2:15115656-15115675 | MS.gene059893:intron | 40.0% | |
GAAGTTGCTTACGTTGAAAG+AGG | + | chr2.2:15115838-15115857 | None:intergenic | 40.0% | |
GGTACGCAAGATTACCTTAT+AGG | - | chr2.2:15116281-15116300 | MS.gene059893:intron | 40.0% | |
GTTGCATCTTAACTTCTGGT+AGG | - | chr2.2:15115206-15115225 | MS.gene059893:intron | 40.0% | |
TCCTTGGTATAGTAGTTCGA+AGG | + | chr2.2:15116059-15116078 | None:intergenic | 40.0% | |
TGATTGCTTCTTTGACTGGA+TGG | - | chr2.2:15116205-15116224 | MS.gene059893:intron | 40.0% | |
TGCAGACTAGGAGAGAAAAA+TGG | - | chr2.2:15115264-15115283 | MS.gene059893:intron | 40.0% | |
TGGCTCATTGTTATCTGTTC+CGG | - | chr2.2:15115010-15115029 | MS.gene059893:intron | 40.0% | |
TGTTGCATTGTAGATCCTCA+TGG | - | chr2.2:15115634-15115653 | MS.gene059893:intron | 40.0% | |
TTGTCAATAGCAACCACTAC+CGG | - | chr2.2:15116421-15116440 | MS.gene059893:intron | 40.0% | |
! | CATTCTACTAGCTTCACCAA+TGG | + | chr2.2:15115550-15115569 | None:intergenic | 40.0% |
! | GGATGGACTTTACTCTTCTA+CGG | - | chr2.2:15116222-15116241 | MS.gene059893:intron | 40.0% |
!! | AAAGGCATTGCAATTTAGGC+TGG | - | chr2.2:15115350-15115369 | MS.gene059893:intron | 40.0% |
!! | AACACGTTGATGATGTCATG+AGG | + | chr2.2:15116120-15116139 | None:intergenic | 40.0% |
AAGGGAGGGGAATACAATAC+CGG | + | chr2.2:15114533-15114552 | None:intergenic | 45.0% | |
AGATCCTCATGGAACTCCAA+AGG | - | chr2.2:15115645-15115664 | MS.gene059893:intron | 45.0% | |
ATCCACTGTCTCCATCTAAG+TGG | - | chr2.2:15115683-15115702 | MS.gene059893:intron | 45.0% | |
CAAAGAGGGAATGCATAAGC+CGG | + | chr2.2:15115032-15115051 | None:intergenic | 45.0% | |
GCCTTCGAACTACTATACCA+AGG | - | chr2.2:15116055-15116074 | MS.gene059893:intron | 45.0% | |
GGTGGTTACAAGTTCTTCAC+TGG | - | chr2.2:15116243-15116262 | MS.gene059893:intron | 45.0% | |
GGTTACAAGTTCTTCACTGG+TGG | - | chr2.2:15116246-15116265 | MS.gene059893:intron | 45.0% | |
TCCAAAGGTGAACATTTGGC+AGG | - | chr2.2:15115660-15115679 | MS.gene059893:intron | 45.0% | |
TCCGTCTGTTACAATGAGCT+GGG | - | chr2.2:15114750-15114769 | MS.gene059893:CDS | 45.0% | |
TCCTGCCAAATGTTCACCTT+TGG | + | chr2.2:15115664-15115683 | None:intergenic | 45.0% | |
TGGACTTTACTCTTCTACGG+TGG | - | chr2.2:15116225-15116244 | MS.gene059893:intron | 45.0% | |
TTCCACTTAGATGGAGACAG+TGG | + | chr2.2:15115688-15115707 | None:intergenic | 45.0% | |
! | ATGAACGAGTGAAGCGGATT+TGG | + | chr2.2:15114488-15114507 | None:intergenic | 45.0% |
! | CGTCCTTGACAATTTTCTCG+TGG | - | chr2.2:15114649-15114668 | MS.gene059893:intron | 45.0% |
! | TGAACGAGTGAAGCGGATTT+GGG | + | chr2.2:15114487-15114506 | None:intergenic | 45.0% |
!! | TTCACCTTTGGAGTTCCATG+AGG | + | chr2.2:15115652-15115671 | None:intergenic | 45.0% |
AACCACTACCGGCGTTATTG+CGG | - | chr2.2:15116432-15116451 | MS.gene059893:intron | 50.0% | |
CCCCAGCTCATTGTAACAGA+CGG | + | chr2.2:15114754-15114773 | None:intergenic | 50.0% | |
CCGTCTGTTACAATGAGCTG+GGG | - | chr2.2:15114751-15114770 | MS.gene059893:CDS | 50.0% | |
GTCCGTCTGTTACAATGAGC+TGG | - | chr2.2:15114749-15114768 | MS.gene059893:CDS | 50.0% | |
GTTCTTCACTGGTGGCAAGA+AGG | - | chr2.2:15116254-15116273 | MS.gene059893:intron | 50.0% | |
TTCTCTCCTAGTCTGCAGCT+AGG | + | chr2.2:15115261-15115280 | None:intergenic | 50.0% | |
!! | AAAAGGCATCGAAGGAAGGG+AGG | + | chr2.2:15114548-15114567 | None:intergenic | 50.0% |
!! | AAAGGCATCGAAGGAAGGGA+GGG | + | chr2.2:15114547-15114566 | None:intergenic | 50.0% |
!! | ACGGAAAAGGCATCGAAGGA+AGG | + | chr2.2:15114552-15114571 | None:intergenic | 50.0% |
!! | CGGAAAAGGCATCGAAGGAA+GGG | + | chr2.2:15114551-15114570 | None:intergenic | 50.0% |
!! | GATGACGGAAAAGGCATCGA+AGG | + | chr2.2:15114556-15114575 | None:intergenic | 50.0% |
!!! | GCGTCGCGTTTTACTGGTTT+TGG | + | chr2.2:15116468-15116487 | None:intergenic | 50.0% |
CACTGGTGGCAAGAAGGAAG+AGG | - | chr2.2:15116260-15116279 | MS.gene059893:intron | 55.0% | |
CGTGATCCTAGCTGCAGACT+AGG | - | chr2.2:15115252-15115271 | MS.gene059893:intron | 55.0% | |
GGAGGGGAATACAATACCGG+AGG | + | chr2.2:15114530-15114549 | None:intergenic | 55.0% | |
! | AAGCGGATTTGGGTGAGGAG+AGG | + | chr2.2:15114477-15114496 | None:intergenic | 55.0% |
! | GAGTGAAGCGGATTTGGGTG+AGG | + | chr2.2:15114482-15114501 | None:intergenic | 55.0% |
!! | AAGGCATCGAAGGAAGGGAG+GGG | + | chr2.2:15114546-15114565 | None:intergenic | 55.0% |
AAACGCGACGCAGCGCTACA+AGG | - | chr2.2:15116477-15116496 | MS.gene059893:CDS | 60.0% | |
GCGGCGATGAACGAGTGAAG+CGG | + | chr2.2:15114494-15114513 | None:intergenic | 60.0% | |
GCTTCACTCGTTCATCGCCG+CGG | - | chr2.2:15114493-15114512 | MS.gene059893:CDS | 60.0% | |
! | AGCGCTGCGTCGCGTTTTAC+TGG | + | chr2.2:15116474-15116493 | None:intergenic | 60.0% |
ACTCGTTCATCGCCGCGGCA+TGG | - | chr2.2:15114498-15114517 | MS.gene059893:CDS | 65.0% | |
CGCCGCAATAACGCCGGTAG+TGG | + | chr2.2:15116437-15116456 | None:intergenic | 65.0% | |
CTACCGGCGTTATTGCGGCG+CGG | - | chr2.2:15116437-15116456 | MS.gene059893:intron | 65.0% | |
TACCGGCGTTATTGCGGCGC+GGG | - | chr2.2:15116438-15116457 | MS.gene059893:intron | 65.0% | |
! | GGCGGAGCGCTTGGAGAAAG+CGG | - | chr2.2:15116498-15116517 | MS.gene059893:CDS | 65.0% |
ACCGGCGTTATTGCGGCGCG+GGG | - | chr2.2:15116439-15116458 | MS.gene059893:intron | 70.0% | |
CGCGACGCAGCGCTACAAGG+CGG | - | chr2.2:15116480-15116499 | MS.gene059893:CDS | 70.0% | |
CGGAGGAACCAGCCATGCCG+CGG | + | chr2.2:15114513-15114532 | None:intergenic | 70.0% | |
GTTCATCGCCGCGGCATGGC+TGG | - | chr2.2:15114502-15114521 | MS.gene059893:CDS | 70.0% | |
! | CGCGGCATGGCTGGTTCCTC+CGG | - | chr2.2:15114511-15114530 | MS.gene059893:CDS | 70.0% |
! | GCGCTACAAGGCGGAGCGCT+TGG | - | chr2.2:15116489-15116508 | MS.gene059893:CDS | 70.0% |
GCCCCGCGCCGCAATAACGC+CGG | + | chr2.2:15116443-15116462 | None:intergenic | 75.0% | |
GGCGTTATTGCGGCGCGGGG+CGG | - | chr2.2:15116442-15116461 | MS.gene059893:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 15114460 | 15116524 | 15114460 | ID=MS.gene059893 |
chr2.2 | mRNA | 15114460 | 15116524 | 15114460 | ID=MS.gene059893.t1;Parent=MS.gene059893 |
chr2.2 | exon | 15116452 | 15116524 | 15116452 | ID=MS.gene059893.t1.exon1;Parent=MS.gene059893.t1 |
chr2.2 | CDS | 15116452 | 15116524 | 15116452 | ID=cds.MS.gene059893.t1;Parent=MS.gene059893.t1 |
chr2.2 | exon | 15115267 | 15115337 | 15115267 | ID=MS.gene059893.t1.exon2;Parent=MS.gene059893.t1 |
chr2.2 | CDS | 15115267 | 15115337 | 15115267 | ID=cds.MS.gene059893.t1;Parent=MS.gene059893.t1 |
chr2.2 | exon | 15114703 | 15114783 | 15114703 | ID=MS.gene059893.t1.exon3;Parent=MS.gene059893.t1 |
chr2.2 | CDS | 15114703 | 15114783 | 15114703 | ID=cds.MS.gene059893.t1;Parent=MS.gene059893.t1 |
chr2.2 | exon | 15114460 | 15114585 | 15114460 | ID=MS.gene059893.t1.exon4;Parent=MS.gene059893.t1 |
chr2.2 | CDS | 15114460 | 15114585 | 15114460 | ID=cds.MS.gene059893.t1;Parent=MS.gene059893.t1 |
Gene Sequence |
Protein sequence |