Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060202.t1 | XP_003596346.1 | 98.8 | 327 | 4 | 0 | 1 | 327 | 45 | 371 | 2.80E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060202.t1 | Q93VI8 | 77.5 | 333 | 69 | 2 | 1 | 327 | 47 | 379 | 1.7e-147 | 523.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060202.t1 | Q2HSA0 | 98.8 | 327 | 4 | 0 | 1 | 327 | 45 | 371 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene060202.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005646 | MS.gene060202 | PPI |
| MS.gene07167 | MS.gene060202 | PPI |
| MS.gene03015 | MS.gene060202 | PPI |
| MS.gene20689 | MS.gene060202 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060202.t1 | MTR_2g076200 | 98.777 | 327 | 4 | 0 | 1 | 327 | 45 | 371 | 0.0 | 682 |
| MS.gene060202.t1 | MTR_2g076210 | 79.154 | 331 | 62 | 4 | 1 | 327 | 40 | 367 | 0.0 | 527 |
| MS.gene060202.t1 | MTR_2g020280 | 53.672 | 354 | 135 | 5 | 1 | 327 | 42 | 393 | 2.30e-131 | 380 |
| MS.gene060202.t1 | MTR_8g077195 | 52.113 | 355 | 140 | 3 | 3 | 327 | 58 | 412 | 1.11e-125 | 366 |
| MS.gene060202.t1 | MTR_5g020580 | 51.124 | 356 | 142 | 3 | 4 | 327 | 61 | 416 | 3.64e-125 | 365 |
| MS.gene060202.t1 | MTR_1g098790 | 49.333 | 375 | 139 | 6 | 3 | 327 | 58 | 431 | 1.47e-119 | 351 |
| MS.gene060202.t1 | MTR_1g022370 | 51.437 | 348 | 146 | 7 | 3 | 327 | 75 | 422 | 4.25e-119 | 350 |
| MS.gene060202.t1 | MTR_1g088960 | 51.136 | 352 | 139 | 6 | 4 | 327 | 56 | 402 | 9.28e-119 | 348 |
| MS.gene060202.t1 | MTR_2g007930 | 48.787 | 371 | 142 | 8 | 3 | 327 | 59 | 427 | 1.03e-115 | 341 |
| MS.gene060202.t1 | MTR_2g020280 | 53.378 | 296 | 109 | 5 | 59 | 327 | 1 | 294 | 3.46e-104 | 307 |
| MS.gene060202.t1 | MTR_8g077620 | 46.726 | 336 | 151 | 10 | 3 | 318 | 57 | 384 | 2.73e-86 | 265 |
| MS.gene060202.t1 | MTR_8g077675 | 41.477 | 352 | 163 | 9 | 3 | 320 | 53 | 395 | 5.71e-77 | 241 |
| MS.gene060202.t1 | MTR_8g077650 | 39.521 | 334 | 156 | 11 | 5 | 319 | 22 | 328 | 2.85e-58 | 191 |
| MS.gene060202.t1 | MTR_8g077640 | 39.003 | 341 | 123 | 7 | 4 | 317 | 101 | 383 | 2.03e-54 | 182 |
| MS.gene060202.t1 | MTR_1g023800 | 51.648 | 91 | 44 | 0 | 3 | 93 | 57 | 147 | 1.22e-26 | 103 |
| MS.gene060202.t1 | MTR_0210s0010 | 38.372 | 86 | 47 | 1 | 41 | 126 | 9 | 88 | 1.30e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060202.t1 | AT1G53320 | 77.477 | 333 | 69 | 2 | 1 | 327 | 47 | 379 | 0.0 | 529 |
| MS.gene060202.t1 | AT2G47900 | 49.435 | 354 | 150 | 5 | 1 | 327 | 55 | 406 | 1.72e-121 | 355 |
| MS.gene060202.t1 | AT2G47900 | 49.435 | 354 | 150 | 5 | 1 | 327 | 55 | 406 | 1.72e-121 | 355 |
| MS.gene060202.t1 | AT2G47900 | 49.296 | 355 | 150 | 5 | 1 | 327 | 55 | 407 | 2.83e-121 | 355 |
| MS.gene060202.t1 | AT2G18280 | 51.163 | 344 | 146 | 4 | 3 | 327 | 53 | 393 | 4.57e-118 | 346 |
| MS.gene060202.t1 | AT2G18280 | 51.163 | 344 | 146 | 4 | 3 | 327 | 53 | 393 | 4.57e-118 | 346 |
| MS.gene060202.t1 | AT1G76900 | 45.592 | 397 | 141 | 7 | 3 | 327 | 62 | 455 | 4.44e-115 | 340 |
| MS.gene060202.t1 | AT1G76900 | 45.592 | 397 | 141 | 7 | 3 | 327 | 62 | 455 | 4.44e-115 | 340 |
| MS.gene060202.t1 | AT1G76900 | 45.592 | 397 | 141 | 7 | 3 | 327 | 62 | 455 | 4.44e-115 | 340 |
| MS.gene060202.t1 | AT1G25280 | 48.042 | 383 | 140 | 8 | 3 | 327 | 64 | 445 | 8.29e-114 | 337 |
| MS.gene060202.t1 | AT1G47270 | 48.138 | 349 | 148 | 8 | 3 | 327 | 49 | 388 | 1.43e-109 | 324 |
| MS.gene060202.t1 | AT1G47270 | 48.138 | 349 | 148 | 8 | 3 | 327 | 74 | 413 | 2.49e-109 | 324 |
| MS.gene060202.t1 | AT1G47270 | 48.138 | 349 | 148 | 8 | 3 | 327 | 73 | 412 | 3.24e-109 | 324 |
| MS.gene060202.t1 | AT1G43640 | 46.900 | 371 | 146 | 7 | 5 | 327 | 62 | 429 | 1.40e-107 | 320 |
| MS.gene060202.t1 | AT3G06380 | 47.578 | 351 | 148 | 7 | 4 | 327 | 39 | 380 | 5.84e-107 | 317 |
| MS.gene060202.t1 | AT1G43640 | 46.995 | 366 | 143 | 7 | 10 | 327 | 1 | 363 | 1.45e-106 | 316 |
| MS.gene060202.t1 | AT5G18680 | 48.703 | 347 | 153 | 7 | 4 | 327 | 45 | 389 | 4.33e-106 | 315 |
| MS.gene060202.t1 | AT5G18680 | 49.141 | 291 | 124 | 6 | 59 | 327 | 9 | 297 | 2.76e-87 | 264 |
| MS.gene060202.t1 | AT3G06380 | 47.099 | 293 | 120 | 6 | 61 | 327 | 5 | 288 | 4.73e-85 | 258 |
| MS.gene060202.t1 | AT1G25280 | 46.642 | 268 | 85 | 7 | 117 | 327 | 1 | 267 | 3.56e-72 | 224 |
| MS.gene060202.t1 | AT1G25280 | 46.642 | 268 | 85 | 7 | 117 | 327 | 1 | 267 | 3.56e-72 | 224 |
| MS.gene060202.t1 | AT1G61940 | 47.126 | 87 | 46 | 0 | 1 | 87 | 1 | 87 | 8.40e-23 | 95.9 |
| MS.gene060202.t1 | AT1G61940 | 47.541 | 61 | 32 | 0 | 1 | 61 | 1 | 61 | 9.11e-14 | 70.5 |
Find 95 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCACAGCTCGGACTTTCT+TGG | 0.211432 | 2.3:-20782105 | MS.gene060202:intron |
| ATGATGGTTTGGCACCATTA+TGG | 0.232651 | 2.3:+20782049 | None:intergenic |
| GCAGCCCTTGTCCGCCTTCC+AGG | 0.253322 | 2.3:-20781587 | MS.gene060202:CDS |
| GCGATATAACATACTCAGTA+TGG | 0.267086 | 2.3:+20783053 | None:intergenic |
| CTTCAAAAGGTTGAACTTGT+AGG | 0.287891 | 2.3:+20781945 | None:intergenic |
| GCCATTTGCCTAACTAGCTT+TGG | 0.331794 | 2.3:-20781559 | MS.gene060202:CDS |
| TGGCACCATTATGGGGTGGC+TGG | 0.351579 | 2.3:+20782058 | None:intergenic |
| AACTAGCTTTGGCACTAAAC+TGG | 0.354421 | 2.3:-20781548 | MS.gene060202:CDS |
| GTTTAGTGCCAAAGCTAGTT+AGG | 0.355030 | 2.3:+20781551 | None:intergenic |
| TTGAGGGCTTATCTGTTTGC+TGG | 0.356555 | 2.3:+20782002 | None:intergenic |
| TCGCCAGCATTCACAGATAA+AGG | 0.367850 | 2.3:-20783115 | MS.gene060202:intron |
| TTGGCCCTCTTGACTTCAAA+AGG | 0.375126 | 2.3:+20781932 | None:intergenic |
| AGCTCTGGCACATGATGGTT+TGG | 0.380769 | 2.3:+20782038 | None:intergenic |
| TGATGGTTTGGCACCATTAT+GGG | 0.393178 | 2.3:+20782050 | None:intergenic |
| CTTTCCCTCCCGGTTGACTT+TGG | 0.397531 | 2.3:+20781677 | None:intergenic |
| AACAGTACTTACATGATGTA+AGG | 0.402699 | 2.3:+20784584 | None:intergenic |
| TCTTCATCTCCTTTCCCTCC+CGG | 0.407140 | 2.3:+20781667 | None:intergenic |
| TATTAGCAGCTAGAAGATAT+AGG | 0.409814 | 2.3:-20783084 | MS.gene060202:CDS |
| GAAACGGTTCTCCTCCAGTT+TGG | 0.411512 | 2.3:-20781646 | MS.gene060202:CDS |
| CGTCCCCTACTTTACCAAAC+TGG | 0.415882 | 2.3:+20781632 | None:intergenic |
| TACTGTGGACCAAAGTCAAC+CGG | 0.421015 | 2.3:-20781686 | MS.gene060202:CDS |
| GGCAAAACGTCGGCTAGCTC+TGG | 0.426830 | 2.3:+20782023 | None:intergenic |
| AAAGTTTCCTGTCTCATCAA+TGG | 0.435431 | 2.3:-20781890 | MS.gene060202:CDS |
| TTCGCTTTATAAGACAATGA+TGG | 0.435512 | 2.3:+20784641 | None:intergenic |
| GGCACGAGCATTTGCAGTGC+TGG | 0.438763 | 2.3:-20781768 | MS.gene060202:CDS |
| ATACCTTCACCATGGACTAT+AGG | 0.445930 | 2.3:-20781609 | MS.gene060202:CDS |
| TCCTCCAGTTTGGTAAAGTA+GGG | 0.446113 | 2.3:-20781636 | MS.gene060202:CDS |
| CTTGTGCCTGCGTGTGTAAA+CGG | 0.451934 | 2.3:-20785706 | MS.gene060202:CDS |
| CTCCTCCAGTTTGGTAAAGT+AGG | 0.453347 | 2.3:-20781637 | MS.gene060202:CDS |
| AAACGCCTGGAAGGCGGACA+AGG | 0.466204 | 2.3:+20781582 | None:intergenic |
| CAAAGTCAACCGGGAGGGAA+AGG | 0.466547 | 2.3:-20781676 | MS.gene060202:CDS |
| ATTATCTCTGCAAGGAGATC+CGG | 0.469997 | 2.3:+20785782 | None:intergenic |
| TCGCTTTATAAGACAATGAT+GGG | 0.473028 | 2.3:+20784642 | None:intergenic |
| GACAGCCAGCCACCCCATAA+TGG | 0.478762 | 2.3:-20782063 | MS.gene060202:CDS |
| AAGTTTCCTGTCTCATCAAT+GGG | 0.481200 | 2.3:-20781889 | MS.gene060202:CDS |
| AGTGAGCACATCATCCTCCT+TGG | 0.487846 | 2.3:+20781913 | None:intergenic |
| TGCTGGTAACTTCGAGGCAG+GGG | 0.489666 | 2.3:-20781974 | MS.gene060202:CDS |
| TGCAAATGCTCGTGCCACCT+TGG | 0.490175 | 2.3:+20781775 | None:intergenic |
| TTAGGCAAATGGCAAACGCC+TGG | 0.502545 | 2.3:+20781569 | None:intergenic |
| CTTTCACCCATTGATGAGAC+AGG | 0.505376 | 2.3:+20781883 | None:intergenic |
| ATCTGTGAAGAACTTTCAGC+TGG | 0.505739 | 2.3:-20781713 | MS.gene060202:CDS |
| CAAGGAAGTAATGCTTATGT+TGG | 0.506103 | 2.3:-20783010 | MS.gene060202:CDS |
| ATGATGTAAGGGCGAGATAG+AGG | 0.507033 | 2.3:+20784596 | None:intergenic |
| GCCAAAGCTAGTTAGGCAAA+TGG | 0.507967 | 2.3:+20781558 | None:intergenic |
| ACGGTGCGGCCACTGTTCCT+CGG | 0.508536 | 2.3:+20785742 | None:intergenic |
| CTTTCAGCTGGTTGCTACTG+TGG | 0.512635 | 2.3:-20781701 | MS.gene060202:CDS |
| CCTGCTGGTAACTTCGAGGC+AGG | 0.517968 | 2.3:-20781976 | MS.gene060202:CDS |
| TGGGGAAGATCACGTGGTCC+TGG | 0.524705 | 2.3:+20784661 | None:intergenic |
| AAGTTACCAGCAGGAACTTG+AGG | 0.529054 | 2.3:+20781985 | None:intergenic |
| ATGCTTATGTTGGCAAGCTA+AGG | 0.535171 | 2.3:-20783000 | MS.gene060202:intron |
| CTCGTTTAATTATCTCTGCA+AGG | 0.537679 | 2.3:+20785774 | None:intergenic |
| ATAAGCCCTCAAGTTCCTGC+TGG | 0.547760 | 2.3:-20781991 | MS.gene060202:CDS |
| AGTTACCAGCAGGAACTTGA+GGG | 0.551679 | 2.3:+20781986 | None:intergenic |
| CTGCTGGTAACTTCGAGGCA+GGG | 0.552365 | 2.3:-20781975 | MS.gene060202:CDS |
| TGCTGGTGCTTGAACTTCCA+TGG | 0.555279 | 2.3:-20781751 | MS.gene060202:CDS |
| GGCGAGATAGAGGTAAAATG+TGG | 0.568448 | 2.3:+20784606 | None:intergenic |
| GATGGTTTGGCACCATTATG+GGG | 0.570572 | 2.3:+20782051 | None:intergenic |
| TGATTGGTCGACCATGCTAC+CGG | 0.570589 | 2.3:-20785801 | None:intergenic |
| GCTGTCGTAAATTGTGAAGT+TGG | 0.573043 | 2.3:+20782080 | None:intergenic |
| CGGCTAGCTCTGGCACATGA+TGG | 0.573160 | 2.3:+20782033 | None:intergenic |
| CAAGGGCTGCCTATAGTCCA+TGG | 0.582759 | 2.3:+20781600 | None:intergenic |
| TGCAAGGAGATCCGGTAGCA+TGG | 0.583668 | 2.3:+20785790 | None:intergenic |
| AGGGAAAGGAGATGAAGAAA+CGG | 0.585294 | 2.3:-20781662 | MS.gene060202:CDS |
| AACGCCTGGAAGGCGGACAA+GGG | 0.585668 | 2.3:+20781583 | None:intergenic |
| TCGACGTCGCCGAGGAACAG+TGG | 0.595204 | 2.3:-20785751 | MS.gene060202:CDS |
| AGTTCCTGCTGGTAACTTCG+AGG | 0.598795 | 2.3:-20781980 | MS.gene060202:CDS |
| AGGACCTGTTTAAGACAAGA+AGG | 0.600079 | 2.3:+20785623 | None:intergenic |
| GCAAATGGCAAACGCCTGGA+AGG | 0.600612 | 2.3:+20781573 | None:intergenic |
| ACAGTACTTACATGATGTAA+GGG | 0.604759 | 2.3:+20784585 | None:intergenic |
| CCTGCCTCGAAGTTACCAGC+AGG | 0.604926 | 2.3:+20781976 | None:intergenic |
| CGATATAACATACTCAGTAT+GGG | 0.610140 | 2.3:+20783054 | None:intergenic |
| AATGGCAAACGCCTGGAAGG+CGG | 0.622747 | 2.3:+20781576 | None:intergenic |
| GGTTTGGCACCATTATGGGG+TGG | 0.626155 | 2.3:+20782054 | None:intergenic |
| ATGCCACTGTCACACGACCA+TGG | 0.630427 | 2.3:+20781734 | None:intergenic |
| CTGCCTATAGTCCATGGTGA+AGG | 0.631313 | 2.3:+20781606 | None:intergenic |
| TAAACGAGTCGACGTCGCCG+AGG | 0.631578 | 2.3:-20785759 | MS.gene060202:CDS |
| CCTCCAGTTTGGTAAAGTAG+GGG | 0.636441 | 2.3:-20781635 | MS.gene060202:CDS |
| TCTGTTTGCTGGCAAAACGT+CGG | 0.642974 | 2.3:+20782013 | None:intergenic |
| CAATGATGGGGAAGATCACG+TGG | 0.646996 | 2.3:+20784655 | None:intergenic |
| CTTCCATGGTCGTGTGACAG+TGG | 0.649357 | 2.3:-20781737 | MS.gene060202:CDS |
| TGGACCAAAGTCAACCGGGA+GGG | 0.649647 | 2.3:-20781681 | MS.gene060202:CDS |
| TCTTGAAGAACAAAGCTCCA+AGG | 0.652245 | 2.3:-20781792 | MS.gene060202:CDS |
| CGCTTTATAAGACAATGATG+GGG | 0.652274 | 2.3:+20784643 | None:intergenic |
| GTTAAGTCACCTCAACGTAA+CGG | 0.655976 | 2.3:-20785659 | MS.gene060202:CDS |
| CCCCTACTTTACCAAACTGG+AGG | 0.658277 | 2.3:+20781635 | None:intergenic |
| ACTGTGGACCAAAGTCAACC+GGG | 0.662686 | 2.3:-20781685 | MS.gene060202:CDS |
| TGAAGTCAAGAGGGCCAAGG+AGG | 0.670940 | 2.3:-20781927 | MS.gene060202:CDS |
| GTGATTGTGCCGTTACGTTG+AGG | 0.690998 | 2.3:+20785650 | None:intergenic |
| AGGGGACGATACCTTCACCA+TGG | 0.697116 | 2.3:-20781617 | MS.gene060202:CDS |
| GCAGCTAGAAGATATAGGTG+TGG | 0.701333 | 2.3:-20783079 | MS.gene060202:CDS |
| TCTCCACCGTTTACACACGC+AGG | 0.710172 | 2.3:+20785700 | None:intergenic |
| TGAAGAACAAAGCTCCAAGG+TGG | 0.711390 | 2.3:-20781789 | MS.gene060202:CDS |
| GATGCTGACGACTTATCACA+AGG | 0.713430 | 2.3:-20783028 | MS.gene060202:CDS |
| GTGCCTGCGTGTGTAAACGG+TGG | 0.728961 | 2.3:-20785703 | MS.gene060202:CDS |
| GTGGACCAAAGTCAACCGGG+AGG | 0.755821 | 2.3:-20781682 | MS.gene060202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCATTAATATATAAG+GGG | - | chr2.3:20783405-20783424 | MS.gene060202:intron | 10.0% |
| !! | AGAAATTTCATTAATATATA+AGG | - | chr2.3:20783403-20783422 | MS.gene060202:intron | 10.0% |
| !! | GAAATTTCATTAATATATAA+GGG | - | chr2.3:20783404-20783423 | MS.gene060202:intron | 10.0% |
| !! | AAAAACCATAATTGAATTTA+TGG | - | chr2.3:20785148-20785167 | MS.gene060202:intron | 15.0% |
| !! | AATTTCATTAATATATAAGG+GGG | - | chr2.3:20783406-20783425 | MS.gene060202:intron | 15.0% |
| !! | ATGTTTACAGTAAATAATAT+TGG | + | chr2.3:20783924-20783943 | None:intergenic | 15.0% |
| !! | ATTAGTAGTTTAATAGAATT+TGG | - | chr2.3:20782156-20782175 | MS.gene060202:intron | 15.0% |
| !! | ATTCACTATAGTTTAATAAA+AGG | + | chr2.3:20784879-20784898 | None:intergenic | 15.0% |
| !! | ATTTACCATAAATTCAATTA+TGG | + | chr2.3:20785156-20785175 | None:intergenic | 15.0% |
| !! | CAACCATAAAAAAAATAAAA+AGG | - | chr2.3:20784649-20784668 | MS.gene060202:CDS | 15.0% |
| !! | TATACTAATTTAGTAATTGT+AGG | - | chr2.3:20783662-20783681 | MS.gene060202:intron | 15.0% |
| !! | TCATTAGTTAGAATAATTTA+TGG | - | chr2.3:20781778-20781797 | MS.gene060202:CDS | 15.0% |
| !!! | GTTCCTTTTTATTTTTTTTA+TGG | + | chr2.3:20784655-20784674 | None:intergenic | 15.0% |
| !!! | TAATAATGTGTTTGTTAAAT+GGG | - | chr2.3:20782198-20782217 | MS.gene060202:intron | 15.0% |
| !!! | TTTTATTTTTTTTATGGTTG+AGG | + | chr2.3:20784649-20784668 | None:intergenic | 15.0% |
| !! | AATAATACCAAAATCAATTC+TGG | - | chr2.3:20782467-20782486 | MS.gene060202:intron | 20.0% |
| !! | AATCAGCAATTTATAATTGT+CGG | + | chr2.3:20784097-20784116 | None:intergenic | 20.0% |
| !! | AATTAGTGTTAGTAGTAAAA+GGG | - | chr2.3:20782000-20782019 | MS.gene060202:CDS | 20.0% |
| !! | ACATTCTTATTATGTAAATC+TGG | - | chr2.3:20783635-20783654 | MS.gene060202:intron | 20.0% |
| !! | ATTTACTGTAAACATATGTT+TGG | - | chr2.3:20783929-20783948 | MS.gene060202:intron | 20.0% |
| !! | GAAATGATTGAGATTAATTA+AGG | - | chr2.3:20781945-20781964 | MS.gene060202:CDS | 20.0% |
| !! | GAGATAAAATGATTTATGTT+TGG | - | chr2.3:20782310-20782329 | MS.gene060202:intron | 20.0% |
| !! | TTTAACAAACACATTATTAC+TGG | + | chr2.3:20782197-20782216 | None:intergenic | 20.0% |
| !!! | ATTATTTTTGCATTTAAGCA+TGG | - | chr2.3:20783517-20783536 | MS.gene060202:intron | 20.0% |
| !!! | ATTGATTTTGGTATTATTAG+CGG | + | chr2.3:20782465-20782484 | None:intergenic | 20.0% |
| !!! | CAAGAGTTTTTGTATAAATA+GGG | + | chr2.3:20784971-20784990 | None:intergenic | 20.0% |
| !!! | CTTTGATCTTAGATATTTTT+AGG | + | chr2.3:20784776-20784795 | None:intergenic | 20.0% |
| !!! | CTTTTTAATTTTGTGTTTGT+TGG | - | chr2.3:20781861-20781880 | MS.gene060202:CDS | 20.0% |
| !!! | GTAATAATGTGTTTGTTAAA+TGG | - | chr2.3:20782197-20782216 | MS.gene060202:intron | 20.0% |
| !!! | TACATTTTCTTTGATGTTTT+GGG | - | chr2.3:20784140-20784159 | MS.gene060202:intron | 20.0% |
| !!! | TACTTAATTCTATCATCTTT+TGG | - | chr2.3:20783550-20783569 | MS.gene060202:intron | 20.0% |
| !!! | TCAAGAGTTTTTGTATAAAT+AGG | + | chr2.3:20784972-20784991 | None:intergenic | 20.0% |
| !!! | TGATTAACATTTTCTTCAAT+TGG | - | chr2.3:20782547-20782566 | MS.gene060202:intron | 20.0% |
| !!! | TTACATTTTCTTTGATGTTT+TGG | - | chr2.3:20784139-20784158 | MS.gene060202:intron | 20.0% |
| !!! | TTATTTAGATTTAACCCTTT+TGG | - | chr2.3:20781830-20781849 | MS.gene060202:CDS | 20.0% |
| !!! | TTTTTATCCTTTTTGTTGAA+TGG | - | chr2.3:20784426-20784445 | MS.gene060202:intron | 20.0% |
| ! | AAAGGAACTTACTCTTATAA+AGG | - | chr2.3:20784667-20784686 | MS.gene060202:intron | 25.0% |
| ! | AAATGATGATAGTTAGTACA+AGG | - | chr2.3:20784053-20784072 | MS.gene060202:intron | 25.0% |
| ! | AATATATTTGTCAAACCACA+TGG | - | chr2.3:20783030-20783049 | MS.gene060202:CDS | 25.0% |
| ! | ATGATAGAATTAAGTAACCA+TGG | + | chr2.3:20783546-20783565 | None:intergenic | 25.0% |
| ! | CAATTAGTGTTAGTAGTAAA+AGG | - | chr2.3:20781999-20782018 | MS.gene060202:CDS | 25.0% |
| ! | TAAAAGGATATCATACAACT+CGG | + | chr2.3:20782825-20782844 | None:intergenic | 25.0% |
| ! | TGTTAAATGGGTATTAGTAT+TGG | - | chr2.3:20782210-20782229 | MS.gene060202:intron | 25.0% |
| ! | TTAATGTAAGATACTGTCAT+TGG | - | chr2.3:20784456-20784475 | MS.gene060202:intron | 25.0% |
| ! | TTAGTAGTAAAAGGGTTTAT+TGG | - | chr2.3:20782008-20782027 | MS.gene060202:CDS | 25.0% |
| ! | TTCTTATTATGTAAATCTGG+AGG | - | chr2.3:20783638-20783657 | MS.gene060202:intron | 25.0% |
| ! | TTGAGTGTAAAAATCACATT+AGG | - | chr2.3:20782367-20782386 | MS.gene060202:intron | 25.0% |
| ! | TTTCAACCATCTATAAAAAC+AGG | + | chr2.3:20782790-20782809 | None:intergenic | 25.0% |
| !! | AAAAAGTACATACTCCAAAA+GGG | + | chr2.3:20781847-20781866 | None:intergenic | 25.0% |
| !! | AAAAATGAAATGTTTTTCGC+AGG | + | chr2.3:20781725-20781744 | None:intergenic | 25.0% |
| !! | AAGCTTATCTTTTCTTATTG+TGG | + | chr2.3:20783286-20783305 | None:intergenic | 25.0% |
| !! | AGCTTATCTTTTCTTATTGT+GGG | + | chr2.3:20783285-20783304 | None:intergenic | 25.0% |
| !! | ATATCCTTTTATCTTCCTAT+GGG | - | chr2.3:20782834-20782853 | MS.gene060202:intron | 25.0% |
| !! | ATGTCTTAATTTTAGATTGG+TGG | - | chr2.3:20782110-20782129 | MS.gene060202:intron | 25.0% |
| !! | GCTATGTCTTAATTTTAGAT+TGG | - | chr2.3:20782107-20782126 | MS.gene060202:intron | 25.0% |
| !! | TAAAAAGTACATACTCCAAA+AGG | + | chr2.3:20781848-20781867 | None:intergenic | 25.0% |
| !! | TGTCTTAATTTTAGATTGGT+GGG | - | chr2.3:20782111-20782130 | MS.gene060202:intron | 25.0% |
| !! | TTAACATTTTCTTCAATTGG+TGG | - | chr2.3:20782550-20782569 | MS.gene060202:intron | 25.0% |
| !! | TTAATTATGTTTTCGTTGTG+AGG | - | chr2.3:20782038-20782057 | MS.gene060202:CDS | 25.0% |
| !!! | AATGAGACATAAGTTGATTT+CGG | - | chr2.3:20782597-20782616 | MS.gene060202:intron | 25.0% |
| !!! | GAAACATTTTATTTCTTTCC+TGG | + | chr2.3:20784384-20784403 | None:intergenic | 25.0% |
| !!! | GATTTTAAAAATCCAAAGCA+CGG | - | chr2.3:20784802-20784821 | MS.gene060202:intron | 25.0% |
| !!! | GGAGGAATACTTTTTTTTTA+TGG | - | chr2.3:20782488-20782507 | MS.gene060202:intron | 25.0% |
| !!! | GTAGTTTTATGTGTTTTAAG+TGG | - | chr2.3:20782239-20782258 | MS.gene060202:intron | 25.0% |
| !!! | TTGATTTTGGTATTATTAGC+GGG | + | chr2.3:20782464-20782483 | None:intergenic | 25.0% |
| !!! | TTTTTGCCTGTTTTTATAGA+TGG | - | chr2.3:20782781-20782800 | MS.gene060202:intron | 25.0% |
| AAAACTCTTGATGTGTATGT+TGG | - | chr2.3:20784981-20785000 | MS.gene060202:intron | 30.0% | |
| AAAGATGGAAGAATAGTGTT+CGG | - | chr2.3:20782263-20782282 | MS.gene060202:intron | 30.0% | |
| AAAGGAATATTCACTACTAC+AGG | + | chr2.3:20783827-20783846 | None:intergenic | 30.0% | |
| AACAGTACTTACATGATGTA+AGG | + | chr2.3:20782744-20782763 | None:intergenic | 30.0% | |
| AAGACAGAACAGAAACTAAA+TGG | + | chr2.3:20785203-20785222 | None:intergenic | 30.0% | |
| AATACAAACCAGACATTTAC+AGG | + | chr2.3:20782576-20782595 | None:intergenic | 30.0% | |
| AATACCAAAATCAATTCTGG+AGG | - | chr2.3:20782470-20782489 | MS.gene060202:intron | 30.0% | |
| ACAAAAAGTTATTTGCTTCC+AGG | - | chr2.3:20784363-20784382 | MS.gene060202:intron | 30.0% | |
| ACAAATCAGAGTATGCATTT+AGG | + | chr2.3:20783483-20783502 | None:intergenic | 30.0% | |
| ACAGTACTTACATGATGTAA+GGG | + | chr2.3:20782743-20782762 | None:intergenic | 30.0% | |
| ACTACTACAGGAAAAGAAAA+AGG | + | chr2.3:20783815-20783834 | None:intergenic | 30.0% | |
| AGTGTAAAAATCACATTAGG+AGG | - | chr2.3:20782370-20782389 | MS.gene060202:intron | 30.0% | |
| ATGAGTAAATTGAACAAGGT+AGG | + | chr2.3:20783127-20783146 | None:intergenic | 30.0% | |
| ATTCCTTTGTAGTAGTTATG+TGG | - | chr2.3:20783839-20783858 | MS.gene060202:intron | 30.0% | |
| CACCAATATTATGTAGCTTT+GGG | + | chr2.3:20784921-20784940 | None:intergenic | 30.0% | |
| CGATATAACATACTCAGTAT+GGG | + | chr2.3:20784274-20784293 | None:intergenic | 30.0% | |
| GGTTTAGTGTTGTGAAATAT+CGG | - | chr2.3:20783165-20783184 | MS.gene060202:intron | 30.0% | |
| GTTGATCGTATAAAGTCTAA+TGG | - | chr2.3:20782864-20782883 | MS.gene060202:intron | 30.0% | |
| TACTGTAAACATATGTTTGG+TGG | - | chr2.3:20783932-20783951 | MS.gene060202:intron | 30.0% | |
| TAGGATGAGTAAATTGAACA+AGG | + | chr2.3:20783131-20783150 | None:intergenic | 30.0% | |
| TATTAGCAGCTAGAAGATAT+AGG | - | chr2.3:20784241-20784260 | MS.gene060202:intron | 30.0% | |
| TCACCAATATTATGTAGCTT+TGG | + | chr2.3:20784922-20784941 | None:intergenic | 30.0% | |
| TCCAATTCTTGAGCAATTAA+TGG | - | chr2.3:20783896-20783915 | MS.gene060202:intron | 30.0% | |
| TCCATTAATTGCTCAAGAAT+TGG | + | chr2.3:20783900-20783919 | None:intergenic | 30.0% | |
| TCGCTTTATAAGACAATGAT+GGG | + | chr2.3:20782686-20782705 | None:intergenic | 30.0% | |
| TGTTAGTTAGTGAGTGATTT+GGG | - | chr2.3:20782063-20782082 | MS.gene060202:CDS | 30.0% | |
| TTCGCTTTATAAGACAATGA+TGG | + | chr2.3:20782687-20782706 | None:intergenic | 30.0% | |
| TTGGCTATTAATTAAGCACT+TGG | - | chr2.3:20781880-20781899 | MS.gene060202:CDS | 30.0% | |
| TTGTATAAATAGGGCTAAGA+GGG | + | chr2.3:20784962-20784981 | None:intergenic | 30.0% | |
| TTGTTAGTTAGTGAGTGATT+TGG | - | chr2.3:20782062-20782081 | MS.gene060202:CDS | 30.0% | |
| TTTGTATAAATAGGGCTAAG+AGG | + | chr2.3:20784963-20784982 | None:intergenic | 30.0% | |
| ! | AAATGCATACTCTGATTTGT+TGG | - | chr2.3:20783483-20783502 | MS.gene060202:intron | 30.0% |
| ! | AATGTTTTCAGAGATTGAAG+TGG | - | chr2.3:20783349-20783368 | MS.gene060202:intron | 30.0% |
| ! | CTTCAAGTTAGAATCAATTC+TGG | - | chr2.3:20782413-20782432 | MS.gene060202:intron | 30.0% |
| ! | GATATCCTTTTATCTTCCTA+TGG | - | chr2.3:20782833-20782852 | MS.gene060202:intron | 30.0% |
| ! | TATCCTTTTATCTTCCTATG+GGG | - | chr2.3:20782835-20782854 | MS.gene060202:intron | 30.0% |
| ! | TTAATTAAGCACTTGGTAGT+TGG | - | chr2.3:20781887-20781906 | MS.gene060202:CDS | 30.0% |
| ! | TTTTCCTTCTTGTCTTAAAC+AGG | - | chr2.3:20781698-20781717 | MS.gene060202:CDS | 30.0% |
| !! | ACATCATGTAAGTACTGTTT+TGG | - | chr2.3:20782745-20782764 | MS.gene060202:intron | 30.0% |
| !! | ATGAGACATAAGTTGATTTC+GGG | - | chr2.3:20782598-20782617 | MS.gene060202:intron | 30.0% |
| !! | TATTCCTCCAGAATTGATTT+TGG | + | chr2.3:20782477-20782496 | None:intergenic | 30.0% |
| !! | TGTGTTTTAAGTGGAAAAGA+TGG | - | chr2.3:20782248-20782267 | MS.gene060202:intron | 30.0% |
| !!! | GATATTTTAGCTTTCCGTTA+CGG | - | chr2.3:20783230-20783249 | MS.gene060202:intron | 30.0% |
| AAAATTGCTGATCCTGATAC+AGG | - | chr2.3:20783755-20783774 | MS.gene060202:intron | 35.0% | |
| AAACCGAACTAGTTAGGAAT+AGG | + | chr2.3:20783150-20783169 | None:intergenic | 35.0% | |
| AAAGTTTCCTGTCTCATCAA+TGG | - | chr2.3:20785435-20785454 | MS.gene060202:intron | 35.0% | |
| AACACTAAACCGAACTAGTT+AGG | + | chr2.3:20783156-20783175 | None:intergenic | 35.0% | |
| AAGATGGAAGAATAGTGTTC+GGG | - | chr2.3:20782264-20782283 | MS.gene060202:intron | 35.0% | |
| AAGTTTCCTGTCTCATCAAT+GGG | - | chr2.3:20785436-20785455 | MS.gene060202:intron | 35.0% | |
| AGATCTGCAAAACATCTCAT+TGG | - | chr2.3:20782903-20782922 | MS.gene060202:intron | 35.0% | |
| CAACCACATAACTACTACAA+AGG | + | chr2.3:20783845-20783864 | None:intergenic | 35.0% | |
| CAAGGAAGTAATGCTTATGT+TGG | - | chr2.3:20784315-20784334 | MS.gene060202:intron | 35.0% | |
| CAAGTTAGAATCAATTCTGG+AGG | - | chr2.3:20782416-20782435 | MS.gene060202:intron | 35.0% | |
| CACCCAAAGCTACATAATAT+TGG | - | chr2.3:20784916-20784935 | MS.gene060202:intron | 35.0% | |
| CATCCTATTCCTAACTAGTT+CGG | - | chr2.3:20783144-20783163 | MS.gene060202:intron | 35.0% | |
| CATCTCATTGGTCAAATGTA+TGG | - | chr2.3:20782915-20782934 | MS.gene060202:intron | 35.0% | |
| CGCTTTATAAGACAATGATG+GGG | + | chr2.3:20782685-20782704 | None:intergenic | 35.0% | |
| CTCGTTTAATTATCTCTGCA+AGG | + | chr2.3:20781554-20781573 | None:intergenic | 35.0% | |
| CTTCAAAAGGTTGAACTTGT+AGG | + | chr2.3:20785383-20785402 | None:intergenic | 35.0% | |
| GAAATCTGTGTTTCATAGCT+TGG | - | chr2.3:20785039-20785058 | MS.gene060202:intron | 35.0% | |
| GAACAACTCTCTTTCAATCA+TGG | + | chr2.3:20783977-20783996 | None:intergenic | 35.0% | |
| GCGATATAACATACTCAGTA+TGG | + | chr2.3:20784275-20784294 | None:intergenic | 35.0% | |
| GTATGGCAAACATTACTTGT+GGG | - | chr2.3:20782932-20782951 | MS.gene060202:intron | 35.0% | |
| TAAAAGGGTTTATTGGTGAG+TGG | - | chr2.3:20782015-20782034 | MS.gene060202:CDS | 35.0% | |
| TAATTCTCAGTTTCCTACCA+AGG | + | chr2.3:20784567-20784586 | None:intergenic | 35.0% | |
| TACTTGAAGATGCAATGGAA+TGG | - | chr2.3:20781974-20781993 | MS.gene060202:CDS | 35.0% | |
| TATGGCAAACATTACTTGTG+GGG | - | chr2.3:20782933-20782952 | MS.gene060202:intron | 35.0% | |
| TCTTATGTGTTTCTTCTGCT+TGG | - | chr2.3:20784402-20784421 | MS.gene060202:intron | 35.0% | |
| TGAAACACAGATTTCAGCAT+AGG | + | chr2.3:20785034-20785053 | None:intergenic | 35.0% | |
| TGAGAATTAGAACTCTGTGT+TGG | - | chr2.3:20784578-20784597 | MS.gene060202:intron | 35.0% | |
| TGTATGGCAAACATTACTTG+TGG | - | chr2.3:20782931-20782950 | MS.gene060202:intron | 35.0% | |
| TTTCCTTTATCTGTGAATGC+TGG | + | chr2.3:20784216-20784235 | None:intergenic | 35.0% | |
| ! | GTCGATTGATAACACTAGTT+TGG | - | chr2.3:20783256-20783275 | MS.gene060202:intron | 35.0% |
| ! | TCAGATAGCAAGTCTTTTGA+TGG | - | chr2.3:20785466-20785485 | MS.gene060202:intron | 35.0% |
| ! | TCAGCAATTTTTCTAGACCT+AGG | + | chr2.3:20783746-20783765 | None:intergenic | 35.0% |
| ! | TTTGCTACTTGAAGATGCAA+TGG | - | chr2.3:20781969-20781988 | MS.gene060202:CDS | 35.0% |
| ! | TTTTCAGAGATTGAAGTGGA+AGG | - | chr2.3:20783353-20783372 | MS.gene060202:intron | 35.0% |
| !! | ACAAAGAAGAGCTTTGTTGT+TGG | - | chr2.3:20782963-20782982 | MS.gene060202:intron | 35.0% |
| !! | TATGTAGCTTTGGGTGTAAA+TGG | + | chr2.3:20784912-20784931 | None:intergenic | 35.0% |
| !! | TGAGACATAAGTTGATTTCG+GGG | - | chr2.3:20782599-20782618 | MS.gene060202:intron | 35.0% |
| !!! | TCAACCTTTTGAAGTCAAGA+GGG | - | chr2.3:20785389-20785408 | MS.gene060202:intron | 35.0% |
| !!! | TTCAACCTTTTGAAGTCAAG+AGG | - | chr2.3:20785388-20785407 | MS.gene060202:intron | 35.0% |
| !!! | TTGGTGGGTTAATACTGTTT+TGG | - | chr2.3:20782126-20782145 | MS.gene060202:intron | 35.0% |
| AGAATAGTGTTCGGGAATCA+AGG | - | chr2.3:20782272-20782291 | MS.gene060202:intron | 40.0% | |
| AGCAAGTCATCTTGGAGTAT+TGG | + | chr2.3:20783085-20783104 | None:intergenic | 40.0% | |
| AGGGAAAGGAGATGAAGAAA+CGG | - | chr2.3:20785663-20785682 | MS.gene060202:CDS | 40.0% | |
| ATCTGTGAAGAACTTTCAGC+TGG | - | chr2.3:20785612-20785631 | MS.gene060202:intron | 40.0% | |
| ATGCTTATGTTGGCAAGCTA+AGG | - | chr2.3:20784325-20784344 | MS.gene060202:intron | 40.0% | |
| ATTATCTCTGCAAGGAGATC+CGG | + | chr2.3:20781546-20781565 | None:intergenic | 40.0% | |
| GACATAGCTTATGTAGACCT+AGG | - | chr2.3:20783726-20783745 | MS.gene060202:intron | 40.0% | |
| GCTGTCGTAAATTGTGAAGT+TGG | + | chr2.3:20785248-20785267 | None:intergenic | 40.0% | |
| GTACCCCATAGGAAGATAAA+AGG | + | chr2.3:20782841-20782860 | None:intergenic | 40.0% | |
| GTTAAGTCACCTCAACGTAA+CGG | - | chr2.3:20781666-20781685 | MS.gene060202:CDS | 40.0% | |
| GTTCGTAACTGTGTGATTTG+TGG | - | chr2.3:20783993-20784012 | MS.gene060202:intron | 40.0% | |
| GTTTAGTGCCAAAGCTAGTT+AGG | + | chr2.3:20785777-20785796 | None:intergenic | 40.0% | |
| TATCAATCGACGAACCGTAA+CGG | + | chr2.3:20783247-20783266 | None:intergenic | 40.0% | |
| TCCTCCAGTTTGGTAAAGTA+GGG | - | chr2.3:20785689-20785708 | MS.gene060202:CDS | 40.0% | |
| TGGGATATTTGCATGAGCAA+TGG | - | chr2.3:20782082-20782101 | MS.gene060202:CDS | 40.0% | |
| TTGACTGAAGCAAGTCATCT+TGG | + | chr2.3:20783093-20783112 | None:intergenic | 40.0% | |
| TTTATGGTGGCTCAAGATGA+TGG | - | chr2.3:20783208-20783227 | MS.gene060202:intron | 40.0% | |
| ! | AAAACCTTCACTTGTTGCAG+GGG | - | chr2.3:20784704-20784723 | MS.gene060202:intron | 40.0% |
| ! | AGGACCTGTTTAAGACAAGA+AGG | + | chr2.3:20781705-20781724 | None:intergenic | 40.0% |
| ! | ATACCTTCACCATGGACTAT+AGG | - | chr2.3:20785716-20785735 | MS.gene060202:CDS | 40.0% |
| ! | ATCCTTTTTGTTGAATGGCG+TGG | - | chr2.3:20784431-20784450 | MS.gene060202:intron | 40.0% |
| ! | ATGATGGTTTGGCACCATTA+TGG | + | chr2.3:20785279-20785298 | None:intergenic | 40.0% |
| ! | GAAAACCTTCACTTGTTGCA+GGG | - | chr2.3:20784703-20784722 | MS.gene060202:intron | 40.0% |
| ! | GACTTGCTTCAGTCAATGTA+TGG | - | chr2.3:20783097-20783116 | MS.gene060202:CDS | 40.0% |
| ! | TGAAAACCTTCACTTGTTGC+AGG | - | chr2.3:20784702-20784721 | MS.gene060202:intron | 40.0% |
| ! | TGATGGTTTGGCACCATTAT+GGG | + | chr2.3:20785278-20785297 | None:intergenic | 40.0% |
| !! | AACTAGCTTTGGCACTAAAC+TGG | - | chr2.3:20785777-20785796 | MS.gene060202:CDS | 40.0% |
| !! | ATAAGTTGATTTCGGGGGTT+TGG | - | chr2.3:20782605-20782624 | MS.gene060202:intron | 40.0% |
| !! | GAGACATAAGTTGATTTCGG+GGG | - | chr2.3:20782600-20782619 | MS.gene060202:intron | 40.0% |
| !! | TTGGAGTATTGGACTAAGTC+TGG | + | chr2.3:20783074-20783093 | None:intergenic | 40.0% |
| !!! | TGTTTTGATGACTTACAGCC+AGG | - | chr2.3:20782646-20782665 | MS.gene060202:intron | 40.0% |
| AAGTTACCAGCAGGAACTTG+AGG | + | chr2.3:20785343-20785362 | None:intergenic | 45.0% | |
| ACTAAGTCTGGTCAACTGAC+TGG | + | chr2.3:20783062-20783081 | None:intergenic | 45.0% | |
| AGTTACCAGCAGGAACTTGA+GGG | + | chr2.3:20785342-20785361 | None:intergenic | 45.0% | |
| ATGAGCAGAACAGGAAAGAG+GGG | + | chr2.3:20784191-20784210 | None:intergenic | 45.0% | |
| ATGATGTAAGGGCGAGATAG+AGG | + | chr2.3:20782732-20782751 | None:intergenic | 45.0% | |
| CACCACGCCATTCAACAAAA+AGG | + | chr2.3:20784436-20784455 | None:intergenic | 45.0% | |
| CCTCCAGTTTGGTAAAGTAG+GGG | - | chr2.3:20785690-20785709 | MS.gene060202:CDS | 45.0% | |
| CGATCAACAATGTACCCCAT+AGG | + | chr2.3:20782852-20782871 | None:intergenic | 45.0% | |
| CTCCTCCAGTTTGGTAAAGT+AGG | - | chr2.3:20785688-20785707 | MS.gene060202:CDS | 45.0% | |
| CTTTCACCCATTGATGAGAC+AGG | + | chr2.3:20785445-20785464 | None:intergenic | 45.0% | |
| GATGAGCAGAACAGGAAAGA+GGG | + | chr2.3:20784192-20784211 | None:intergenic | 45.0% | |
| GATGCTGACGACTTATCACA+AGG | - | chr2.3:20784297-20784316 | MS.gene060202:intron | 45.0% | |
| GCAGCTAGAAGATATAGGTG+TGG | - | chr2.3:20784246-20784265 | MS.gene060202:intron | 45.0% | |
| GCATTTAAGCATGGTGTCCA+TGG | - | chr2.3:20783526-20783545 | MS.gene060202:intron | 45.0% | |
| GCCAAAGCTAGTTAGGCAAA+TGG | + | chr2.3:20785770-20785789 | None:intergenic | 45.0% | |
| GGAGATTTCATGAGTGGCTA+AGG | - | chr2.3:20783427-20783446 | MS.gene060202:intron | 45.0% | |
| GGCGAGATAGAGGTAAAATG+TGG | + | chr2.3:20782722-20782741 | None:intergenic | 45.0% | |
| GTGTTGTGAAATATCGGCCA+TGG | - | chr2.3:20783171-20783190 | MS.gene060202:intron | 45.0% | |
| TAAGGGGGAGATTTCATGAG+TGG | - | chr2.3:20783421-20783440 | MS.gene060202:intron | 45.0% | |
| TACTGTGGACCAAAGTCAAC+CGG | - | chr2.3:20785639-20785658 | MS.gene060202:CDS | 45.0% | |
| TCGCCAGCATTCACAGATAA+AGG | - | chr2.3:20784210-20784229 | MS.gene060202:intron | 45.0% | |
| TCTGTTCTGTCTTCACAGCT+CGG | - | chr2.3:20785210-20785229 | MS.gene060202:intron | 45.0% | |
| TGAGCCACCATAAAACAGCA+TGG | + | chr2.3:20783202-20783221 | None:intergenic | 45.0% | |
| TTGAGGGCTTATCTGTTTGC+TGG | + | chr2.3:20785326-20785345 | None:intergenic | 45.0% | |
| TTGGCCCTCTTGACTTCAAA+AGG | + | chr2.3:20785396-20785415 | None:intergenic | 45.0% | |
| TTGGTTACATTCACGATCGC+AGG | - | chr2.3:20782329-20782348 | MS.gene060202:intron | 45.0% | |
| TTGTGAAATATCGGCCATGG+TGG | - | chr2.3:20783174-20783193 | MS.gene060202:intron | 45.0% | |
| TTTCTCTGTTGTGATCGCCT+TGG | - | chr2.3:20784547-20784566 | MS.gene060202:intron | 45.0% | |
| ! | AACTCTGTGTTGGCACAATC+AGG | - | chr2.3:20784588-20784607 | MS.gene060202:intron | 45.0% |
| ! | ACTCTGTGTTGGCACAATCA+GGG | - | chr2.3:20784589-20784608 | MS.gene060202:intron | 45.0% |
| ! | ACTGACTGGTTAGAACCATG+TGG | + | chr2.3:20783048-20783067 | None:intergenic | 45.0% |
| ! | ATTGGTGGCCTGTAAATGTC+TGG | - | chr2.3:20782565-20782584 | MS.gene060202:intron | 45.0% |
| ! | CACAAGCGACAACGTTTTGA+CGG | + | chr2.3:20781605-20781624 | None:intergenic | 45.0% |
| ! | GATGGTTTGGCACCATTATG+GGG | + | chr2.3:20785277-20785296 | None:intergenic | 45.0% |
| ! | GCCATTTGCCTAACTAGCTT+TGG | - | chr2.3:20785766-20785785 | MS.gene060202:CDS | 45.0% |
| ! | GGTGCAAACAGGATGGATTT+CGG | - | chr2.3:20784725-20784744 | MS.gene060202:intron | 45.0% |
| ! | TCTGTTTGCTGGCAAAACGT+CGG | + | chr2.3:20785315-20785334 | None:intergenic | 45.0% |
| !! | GTAGCTTTGGGTGTAAATGG+AGG | + | chr2.3:20784909-20784928 | None:intergenic | 45.0% |
| !!! | TTTTGAAGTCAAGAGGGCCA+AGG | - | chr2.3:20785395-20785414 | MS.gene060202:intron | 45.0% |
| !!! | TTTATTTTTGTTTAATTTAT+TGG | - | chr2.3:20781744-20781763 | MS.gene060202:CDS | 5.0% |
| ACTGACTGCAAGCCTGTATC+AGG | + | chr2.3:20783770-20783789 | None:intergenic | 50.0% | |
| ACTGTGGACCAAAGTCAACC+GGG | - | chr2.3:20785640-20785659 | MS.gene060202:CDS | 50.0% | |
| AGTGAGCACATCATCCTCCT+TGG | + | chr2.3:20785415-20785434 | None:intergenic | 50.0% | |
| AGTTCCTGCTGGTAACTTCG+AGG | - | chr2.3:20785345-20785364 | MS.gene060202:intron | 50.0% | |
| ATAAGCCCTCAAGTTCCTGC+TGG | - | chr2.3:20785334-20785353 | MS.gene060202:intron | 50.0% | |
| CCCCTACTTTACCAAACTGG+AGG | + | chr2.3:20785693-20785712 | None:intergenic | 50.0% | |
| CGATGAGCAGAACAGGAAAG+AGG | + | chr2.3:20784193-20784212 | None:intergenic | 50.0% | |
| CGTCCCCTACTTTACCAAAC+TGG | + | chr2.3:20785696-20785715 | None:intergenic | 50.0% | |
| CTGCCTATAGTCCATGGTGA+AGG | + | chr2.3:20785722-20785741 | None:intergenic | 50.0% | |
| CTTCACAGCTCGGACTTTCT+TGG | - | chr2.3:20785220-20785239 | MS.gene060202:intron | 50.0% | |
| CTTGTGCCTGCGTGTGTAAA+CGG | - | chr2.3:20781619-20781638 | MS.gene060202:CDS | 50.0% | |
| CTTTCAGCTGGTTGCTACTG+TGG | - | chr2.3:20785624-20785643 | MS.gene060202:intron | 50.0% | |
| GAAACGGTTCTCCTCCAGTT+TGG | - | chr2.3:20785679-20785698 | MS.gene060202:CDS | 50.0% | |
| TCTGTTGTGATCGCCTTGGT+AGG | - | chr2.3:20784551-20784570 | MS.gene060202:intron | 50.0% | |
| TCTTCATCTCCTTTCCCTCC+CGG | + | chr2.3:20785661-20785680 | None:intergenic | 50.0% | |
| TGCTGGTGCTTGAACTTCCA+TGG | - | chr2.3:20785574-20785593 | MS.gene060202:intron | 50.0% | |
| TTAGGCAAATGGCAAACGCC+TGG | + | chr2.3:20785759-20785778 | None:intergenic | 50.0% | |
| ! | AGCTCTGGCACATGATGGTT+TGG | + | chr2.3:20785290-20785309 | None:intergenic | 50.0% |
| ! | CAATGATGGGGAAGATCACG+TGG | + | chr2.3:20782673-20782692 | None:intergenic | 50.0% |
| ! | GTGATTGTGCCGTTACGTTG+AGG | + | chr2.3:20781678-20781697 | None:intergenic | 50.0% |
| !! | AAAACAGCATGGTGCCACCA+TGG | + | chr2.3:20783191-20783210 | None:intergenic | 50.0% |
| !!! | GGCACCATGCTGTTTTATGG+TGG | - | chr2.3:20783195-20783214 | MS.gene060202:intron | 50.0% |
| !!! | GGTGGCACCATGCTGTTTTA+TGG | - | chr2.3:20783192-20783211 | MS.gene060202:intron | 50.0% |
| AATGGCAAACGCCTGGAAGG+CGG | + | chr2.3:20785752-20785771 | None:intergenic | 55.0% | |
| AGAACAGGAAAGAGGGGCAG+GGG | + | chr2.3:20784185-20784204 | None:intergenic | 55.0% | |
| AGGGGACGATACCTTCACCA+TGG | - | chr2.3:20785708-20785727 | MS.gene060202:CDS | 55.0% | |
| ATGCCACTGTCACACGACCA+TGG | + | chr2.3:20785594-20785613 | None:intergenic | 55.0% | |
| ATGCTGGCGATGAGCAGAAC+AGG | + | chr2.3:20784200-20784219 | None:intergenic | 55.0% | |
| CAAAGTCAACCGGGAGGGAA+AGG | - | chr2.3:20785649-20785668 | MS.gene060202:CDS | 55.0% | |
| CAAGGGCTGCCTATAGTCCA+TGG | + | chr2.3:20785728-20785747 | None:intergenic | 55.0% | |
| CAGAACAGGAAAGAGGGGCA+GGG | + | chr2.3:20784186-20784205 | None:intergenic | 55.0% | |
| CTGCTGGTAACTTCGAGGCA+GGG | - | chr2.3:20785350-20785369 | MS.gene060202:intron | 55.0% | |
| CTTCCATGGTCGTGTGACAG+TGG | - | chr2.3:20785588-20785607 | MS.gene060202:intron | 55.0% | |
| GCAAATGGCAAACGCCTGGA+AGG | + | chr2.3:20785755-20785774 | None:intergenic | 55.0% | |
| GGTTTGGCACCATTATGGGG+TGG | + | chr2.3:20785274-20785293 | None:intergenic | 55.0% | |
| TCTCCACCGTTTACACACGC+AGG | + | chr2.3:20781628-20781647 | None:intergenic | 55.0% | |
| TGAAGTCAAGAGGGCCAAGG+AGG | - | chr2.3:20785398-20785417 | MS.gene060202:intron | 55.0% | |
| TGCAAATGCTCGTGCCACCT+TGG | + | chr2.3:20785553-20785572 | None:intergenic | 55.0% | |
| TGCACCCCTGCAACAAGTGA+AGG | + | chr2.3:20784711-20784730 | None:intergenic | 55.0% | |
| TGCTGGTAACTTCGAGGCAG+GGG | - | chr2.3:20785351-20785370 | MS.gene060202:intron | 55.0% | |
| TGGACCAAAGTCAACCGGGA+GGG | - | chr2.3:20785644-20785663 | MS.gene060202:CDS | 55.0% | |
| ! | CTTGTTGCAGGGGTGCAAAC+AGG | - | chr2.3:20784714-20784733 | MS.gene060202:intron | 55.0% |
| ! | CTTTCCCTCCCGGTTGACTT+TGG | + | chr2.3:20785651-20785670 | None:intergenic | 55.0% |
| ! | TTGCAGGGGTGCAAACAGGA+TGG | - | chr2.3:20784718-20784737 | MS.gene060202:intron | 55.0% |
| !! | GCGACAACGTTTTGACGGTG+CGG | + | chr2.3:20781600-20781619 | None:intergenic | 55.0% |
| AAACGCCTGGAAGGCGGACA+AGG | + | chr2.3:20785746-20785765 | None:intergenic | 60.0% | |
| AACGCCTGGAAGGCGGACAA+GGG | + | chr2.3:20785745-20785764 | None:intergenic | 60.0% | |
| CCTGCCTCGAAGTTACCAGC+AGG | + | chr2.3:20785352-20785371 | None:intergenic | 60.0% | |
| CCTGCTGGTAACTTCGAGGC+AGG | - | chr2.3:20785349-20785368 | MS.gene060202:intron | 60.0% | |
| GACAGCCAGCCACCCCATAA+TGG | - | chr2.3:20785262-20785281 | MS.gene060202:intron | 60.0% | |
| GCAGAACAGGAAAGAGGGGC+AGG | + | chr2.3:20784187-20784206 | None:intergenic | 60.0% | |
| GGCACGAGCATTTGCAGTGC+TGG | - | chr2.3:20785557-20785576 | MS.gene060202:intron | 60.0% | |
| GTGCCTGCGTGTGTAAACGG+TGG | - | chr2.3:20781622-20781641 | MS.gene060202:CDS | 60.0% | |
| GTGGACCAAAGTCAACCGGG+AGG | - | chr2.3:20785643-20785662 | MS.gene060202:CDS | 60.0% | |
| TAAACGAGTCGACGTCGCCG+AGG | - | chr2.3:20781566-20781585 | MS.gene060202:CDS | 60.0% | |
| TGCAGTGCAGTGCCGTGCTT+TGG | + | chr2.3:20784817-20784836 | None:intergenic | 60.0% | |
| TGGCACCATTATGGGGTGGC+TGG | + | chr2.3:20785270-20785289 | None:intergenic | 60.0% | |
| TGGGGAAGATCACGTGGTCC+TGG | + | chr2.3:20782667-20782686 | None:intergenic | 60.0% | |
| ! | GGCAAAACGTCGGCTAGCTC+TGG | + | chr2.3:20785305-20785324 | None:intergenic | 60.0% |
| !! | CGGCTAGCTCTGGCACATGA+TGG | + | chr2.3:20785295-20785314 | None:intergenic | 60.0% |
| ACGGTGCGGCCACTGTTCCT+CGG | + | chr2.3:20781586-20781605 | None:intergenic | 65.0% | |
| TCGACGTCGCCGAGGAACAG+TGG | - | chr2.3:20781574-20781593 | MS.gene060202:CDS | 65.0% | |
| GCAGCCCTTGTCCGCCTTCC+AGG | - | chr2.3:20785738-20785757 | MS.gene060202:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 20781537 | 20785810 | 20781537 | ID=MS.gene060202 |
| chr2.3 | mRNA | 20781537 | 20785810 | 20781537 | ID=MS.gene060202.t1;Parent=MS.gene060202 |
| chr2.3 | exon | 20785628 | 20785810 | 20785628 | ID=MS.gene060202.t1.exon1;Parent=MS.gene060202.t1 |
| chr2.3 | CDS | 20785628 | 20785810 | 20785628 | ID=cds.MS.gene060202.t1;Parent=MS.gene060202.t1 |
| chr2.3 | exon | 20784596 | 20784683 | 20784596 | ID=MS.gene060202.t1.exon2;Parent=MS.gene060202.t1 |
| chr2.3 | CDS | 20784596 | 20784683 | 20784596 | ID=cds.MS.gene060202.t1;Parent=MS.gene060202.t1 |
| chr2.3 | exon | 20783001 | 20783130 | 20783001 | ID=MS.gene060202.t1.exon3;Parent=MS.gene060202.t1 |
| chr2.3 | CDS | 20783001 | 20783130 | 20783001 | ID=cds.MS.gene060202.t1;Parent=MS.gene060202.t1 |
| chr2.3 | exon | 20781537 | 20782119 | 20781537 | ID=MS.gene060202.t1.exon4;Parent=MS.gene060202.t1 |
| chr2.3 | CDS | 20781537 | 20782119 | 20781537 | ID=cds.MS.gene060202.t1;Parent=MS.gene060202.t1 |
| Gene Sequence |
| Protein sequence |
