Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75436.t1 | AES72274.2 | 97.4 | 582 | 15 | 0 | 1 | 582 | 1 | 582 | 0.00E+00 | 1119.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75436.t1 | Q680I5 | 64.4 | 568 | 196 | 4 | 17 | 581 | 13 | 577 | 1.9e-205 | 716.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75436.t1 | G7J4F1 | 97.4 | 582 | 15 | 0 | 1 | 582 | 1 | 582 | 0.0e+00 | 1119.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06026 | MS.gene75436 | -0.830799 | 2.40E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016742 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene070503 | PPI |
| MS.gene75436 | MS.gene070507 | PPI |
| MS.gene75436 | MS.gene008569 | PPI |
| MS.gene81622 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene81620 | PPI |
| MS.gene75436 | MS.gene057883 | PPI |
| MS.gene75436 | MS.gene016758 | PPI |
| MS.gene75436 | MS.gene013831 | PPI |
| MS.gene75436 | MS.gene070492 | PPI |
| MS.gene75436 | MS.gene38520 | PPI |
| MS.gene008569 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene070511 | PPI |
| MS.gene75436 | MS.gene064527 | PPI |
| MS.gene75436 | MS.gene057884 | PPI |
| MS.gene75436 | MS.gene75036 | PPI |
| MS.gene75436 | MS.gene013833 | PPI |
| MS.gene070505 | MS.gene75436 | PPI |
| MS.gene057886 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene070510 | PPI |
| MS.gene66373 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene41579 | PPI |
| MS.gene75436 | MS.gene030326 | PPI |
| MS.gene75436 | MS.gene070509 | PPI |
| MS.gene75436 | MS.gene67840 | PPI |
| MS.gene81615 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene049472 | PPI |
| MS.gene75436 | MS.gene81617 | PPI |
| MS.gene75436 | MS.gene045074 | PPI |
| MS.gene016743 | MS.gene75436 | PPI |
| MS.gene75436 | MS.gene37911 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75436.t1 | MTR_3g087950 | 97.423 | 582 | 15 | 0 | 1 | 582 | 1 | 582 | 0.0 | 1167 |
| MS.gene75436.t1 | MTR_3g466000 | 75.045 | 561 | 139 | 1 | 22 | 582 | 18 | 577 | 0.0 | 854 |
| MS.gene75436.t1 | MTR_6g090280 | 52.028 | 567 | 259 | 4 | 28 | 582 | 58 | 623 | 0.0 | 551 |
| MS.gene75436.t1 | MTR_6g090280 | 50.840 | 476 | 222 | 3 | 118 | 582 | 1 | 475 | 1.44e-167 | 485 |
| MS.gene75436.t1 | MTR_6g090280 | 54.756 | 431 | 192 | 3 | 28 | 456 | 58 | 487 | 1.23e-151 | 446 |
| MS.gene75436.t1 | MTR_5g084180 | 86.792 | 106 | 14 | 0 | 11 | 116 | 17 | 122 | 1.45e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75436.t1 | AT4G39640 | 63.903 | 579 | 199 | 5 | 5 | 581 | 1 | 571 | 0.0 | 746 |
| MS.gene75436.t1 | AT4G39640 | 63.903 | 579 | 199 | 5 | 5 | 581 | 1 | 571 | 0.0 | 746 |
| MS.gene75436.t1 | AT4G39650 | 63.823 | 586 | 198 | 7 | 1 | 581 | 1 | 577 | 0.0 | 727 |
| MS.gene75436.t1 | AT4G29210 | 49.298 | 570 | 267 | 6 | 32 | 582 | 71 | 637 | 0.0 | 557 |
| MS.gene75436.t1 | AT4G29210 | 51.402 | 428 | 204 | 4 | 32 | 456 | 71 | 497 | 6.67e-156 | 457 |
| MS.gene75436.t1 | AT1G69820 | 71.556 | 225 | 63 | 1 | 286 | 509 | 1 | 225 | 1.99e-114 | 340 |
Find 149 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTCCTTCAGGCCTTTC+TGG | 0.074565 | 3.3:-73253775 | MS.gene75436:CDS |
| TCCTACACCTTTATTTATTT+TGG | 0.084530 | 3.3:+73252229 | None:intergenic |
| TTGAACTTTCTGCTAATATC+AGG | 0.251199 | 3.3:-73252340 | MS.gene75436:CDS |
| TGTGGCTGCTGCTCTTTGTT+TGG | 0.260299 | 3.3:-73255292 | MS.gene75436:CDS |
| CATGTCCTTCAGAGCCTTGC+TGG | 0.265745 | 3.3:-73252296 | MS.gene75436:CDS |
| GCAGGAAAACCACCCTTTCT+TGG | 0.267405 | 3.3:+73252185 | None:intergenic |
| GCGGTGCCTTTATGCTTCTT+AGG | 0.281278 | 3.3:-73255236 | MS.gene75436:CDS |
| TCAGTTATATTTACAAAATC+AGG | 0.292693 | 3.3:+73253682 | None:intergenic |
| CCTCCTCTTTGTTTCCAGTT+TGG | 0.297674 | 3.3:-73255460 | MS.gene75436:CDS |
| TGGCTGCAGTTATGTTATTA+TGG | 0.301381 | 3.3:-73255497 | MS.gene75436:CDS |
| TCAAAGCCTCGATTTCTCTA+TGG | 0.303562 | 3.3:+73253740 | None:intergenic |
| CTTGGTATGCCTCCTCCTTC+AGG | 0.309472 | 3.3:-73254134 | MS.gene75436:CDS |
| CTAAGAGCAATTGCAAAGTT+TGG | 0.312938 | 3.3:-73254305 | MS.gene75436:CDS |
| GTGGCTGCTGCTCTTTGTTT+GGG | 0.314878 | 3.3:-73255291 | MS.gene75436:CDS |
| ACTTATGATTCAAGTCATTA+TGG | 0.319436 | 3.3:-73253592 | MS.gene75436:CDS |
| GGACATGGCCCTTACTTCTA+AGG | 0.324451 | 3.3:+73252312 | None:intergenic |
| TCAGGCCTTTCTGGTTCCCT+TGG | 0.331021 | 3.3:-73253766 | MS.gene75436:CDS |
| CTTCCCCGGCACGACGAAAT+TGG | 0.336481 | 3.3:+73253258 | None:intergenic |
| GGAGCAGTTACAGAAGAAAA+AGG | 0.352470 | 3.3:+73253002 | None:intergenic |
| GATCGTCGATGCTCGAAGAT+TGG | 0.359812 | 3.3:-73255357 | MS.gene75436:CDS |
| TTTCAGTTAGAATGAATCTT+GGG | 0.364796 | 3.3:-73253708 | MS.gene75436:CDS |
| GGCCTCTCGGTAGCAGTTCC+AGG | 0.369742 | 3.3:-73254569 | MS.gene75436:CDS |
| CAGGCCTTTCTGGTTCCCTT+GGG | 0.372651 | 3.3:-73253765 | MS.gene75436:CDS |
| ACTACAGTAAATTCGTATTT+CGG | 0.375583 | 3.3:-73253388 | MS.gene75436:CDS |
| CCAAGAAAATCTATAGATAT+AGG | 0.377085 | 3.3:+73254167 | None:intergenic |
| TTTCTTCTGTAACTGCTCCT+AGG | 0.377805 | 3.3:-73252998 | MS.gene75436:CDS |
| ATCGTCGATGCTCGAAGATT+GGG | 0.379068 | 3.3:-73255356 | MS.gene75436:CDS |
| GAACATTCCAAAATAAATAA+AGG | 0.380999 | 3.3:-73252236 | MS.gene75436:CDS |
| CCTGCCAATTTCGTCGTGCC+GGG | 0.393581 | 3.3:-73253262 | MS.gene75436:CDS |
| GTTAAAGATGTTCAGAAGGC+TGG | 0.400636 | 3.3:-73254242 | MS.gene75436:CDS |
| TCCTGCCAATTTCGTCGTGC+CGG | 0.409726 | 3.3:-73253263 | MS.gene75436:CDS |
| ATGTGGTATATTATGAGAAC+TGG | 0.410439 | 3.3:-73252385 | MS.gene75436:CDS |
| GCACAATATGAGCTTCCTTC+AGG | 0.410702 | 3.3:-73253784 | MS.gene75436:CDS |
| GGCAGAAGCAGATGCCAAAC+TGG | 0.410790 | 3.3:+73255446 | None:intergenic |
| AGTTCAGCTTCAAGTGGTAT+TGG | 0.425763 | 3.3:-73255261 | MS.gene75436:CDS |
| TTCTTCTGTAACTGCTCCTA+GGG | 0.425863 | 3.3:-73252997 | MS.gene75436:CDS |
| GCTTTGTATGGTGGAATAGT+TGG | 0.425952 | 3.3:-73254275 | MS.gene75436:CDS |
| ATGCTTCTTAGGTTAGCTAA+TGG | 0.427061 | 3.3:-73255225 | MS.gene75436:CDS |
| ACCCTTTCTTGGATCACTTA+CGG | 0.430481 | 3.3:+73252196 | None:intergenic |
| AGCTAACCTAAGAAGCATAA+AGG | 0.439391 | 3.3:+73255230 | None:intergenic |
| TTTCTTGGATTAAAGATCCT+TGG | 0.439838 | 3.3:-73254152 | MS.gene75436:CDS |
| CAGGGAAAGCCTTAGAAGTA+AGG | 0.450851 | 3.3:-73252321 | MS.gene75436:CDS |
| TTTGGTCCACAAGCTTTGTA+TGG | 0.452119 | 3.3:-73254287 | MS.gene75436:CDS |
| TTCTCATAATATACCACATT+AGG | 0.453122 | 3.3:+73252389 | None:intergenic |
| GAATCACTTTGTCAAAGGAA+TGG | 0.453749 | 3.3:-73253027 | MS.gene75436:CDS |
| AGCAGGCGGTCGAACATCCT+TGG | 0.454513 | 3.3:+73253285 | None:intergenic |
| TTTCAACACTTGAGCAAACT+TGG | 0.459644 | 3.3:+73253636 | None:intergenic |
| TGAAGGCCAGCTAGTTCTCC+TGG | 0.462220 | 3.3:+73254551 | None:intergenic |
| TTGAGTACTATTCCTGTACT+TGG | 0.467003 | 3.3:+73253349 | None:intergenic |
| TGCTCCTAGGGTCTATCATC+AGG | 0.468787 | 3.3:-73252985 | MS.gene75436:intron |
| AAAGTACACTGTTAAACAAA+AGG | 0.472586 | 3.3:-73254192 | MS.gene75436:CDS |
| ACGACGAAATTGGCAGGAGC+AGG | 0.472614 | 3.3:+73253268 | None:intergenic |
| AACACTACTTTGAAGGCAAA+TGG | 0.481370 | 3.3:-73254593 | MS.gene75436:CDS |
| TCCTTCAGAGCCTTGCTGGT+GGG | 0.483076 | 3.3:-73252292 | MS.gene75436:CDS |
| TAACTTACCAGCATCATTTG+AGG | 0.485318 | 3.3:+73254107 | None:intergenic |
| TGGTGGCAACACTACTTTGA+AGG | 0.485618 | 3.3:-73254600 | MS.gene75436:CDS |
| CGAATTTACTGTAGTGGTCA+TGG | 0.494343 | 3.3:+73253396 | None:intergenic |
| AGGGAAGTGAAAGCAGTAGT+AGG | 0.496539 | 3.3:-73253098 | MS.gene75436:CDS |
| CAGTGATTCTTGCTAGTAGA+GGG | 0.498771 | 3.3:-73254475 | MS.gene75436:CDS |
| GAGAACTGGACAACAGTGAC+CGG | 0.499140 | 3.3:-73252371 | MS.gene75436:CDS |
| CGATTTCTCTATGGATCCCA+AGG | 0.500870 | 3.3:+73253749 | None:intergenic |
| AACAACATGGAAAGCTTCCA+TGG | 0.507183 | 3.3:-73254517 | MS.gene75436:CDS |
| TCCATCTGCATGTGAAGGTA+TGG | 0.508355 | 3.3:+73254440 | None:intergenic |
| CCCGGCACGACGAAATTGGC+AGG | 0.508773 | 3.3:+73253262 | None:intergenic |
| GAAGTAATCATTGCTCATCA+TGG | 0.511179 | 3.3:-73255396 | MS.gene75436:CDS |
| TAGCTGGCCTTCACAAGGCA+TGG | 0.517657 | 3.3:-73254541 | MS.gene75436:CDS |
| GATGATAATGGTCTCTTCCC+CGG | 0.518164 | 3.3:+73253244 | None:intergenic |
| CTTCGAGCATCGACGATCAT+CGG | 0.519186 | 3.3:+73255362 | None:intergenic |
| TCCCACCAGCAAGGCTCTGA+AGG | 0.522177 | 3.3:+73252291 | None:intergenic |
| GTCACCAACTATTGTTCTCA+AGG | 0.525838 | 3.3:-73253218 | MS.gene75436:intron |
| ACATGCAGTGGATGCAGCTG+TGG | 0.526599 | 3.3:-73255310 | MS.gene75436:CDS |
| GGCCGTAAGTGATCCAAGAA+AGG | 0.530949 | 3.3:-73252198 | MS.gene75436:CDS |
| GTCCTTCAGAGCCTTGCTGG+TGG | 0.531940 | 3.3:-73252293 | MS.gene75436:CDS |
| TTTAGTTAAAGATGTTCAGA+AGG | 0.532577 | 3.3:-73254246 | MS.gene75436:CDS |
| GTTGGTGACATGGATGATAA+TGG | 0.536093 | 3.3:+73253232 | None:intergenic |
| ATATGTTATAATAAGAAACT+AGG | 0.536973 | 3.3:-73254335 | MS.gene75436:CDS |
| GGGATGGATGTTATCCAAGA+AGG | 0.538671 | 3.3:-73255336 | MS.gene75436:CDS |
| TGAACTTTCTGCTAATATCA+GGG | 0.539929 | 3.3:-73252339 | MS.gene75436:CDS |
| TCAGCTTCAAGTGGTATTGG+TGG | 0.540011 | 3.3:-73255258 | MS.gene75436:CDS |
| GCTTCAAGTGGTATTGGTGG+CGG | 0.540106 | 3.3:-73255255 | MS.gene75436:CDS |
| GGTATGCCTCCTCCTTCAGG+TGG | 0.549489 | 3.3:-73254131 | MS.gene75436:CDS |
| AGGTGGGCCTCAAATGATGC+TGG | 0.553365 | 3.3:-73254114 | MS.gene75436:intron |
| GGCATTACAAGTCTATTCCA+TGG | 0.553522 | 3.3:+73254500 | None:intergenic |
| GATTATTGCTGCAACTTCAG+AGG | 0.553592 | 3.3:-73253057 | MS.gene75436:CDS |
| TGCTCCTCTTCATGCTTCCA+AGG | 0.556551 | 3.3:-73255172 | MS.gene75436:intron |
| TGAGGCCCACCTGAAGGAGG+AGG | 0.557428 | 3.3:+73254125 | None:intergenic |
| GAAGGCAAATGGTGGCCTCT+CGG | 0.562410 | 3.3:-73254582 | MS.gene75436:CDS |
| GGCTGGAGGGATATTGACAT+TGG | 0.564181 | 3.3:-73254225 | MS.gene75436:CDS |
| ATCATTTGAGGCCCACCTGA+AGG | 0.564377 | 3.3:+73254119 | None:intergenic |
| AGGGAAAGCCTTAGAAGTAA+GGG | 0.565321 | 3.3:-73252320 | MS.gene75436:CDS |
| GCCGTAAGTGATCCAAGAAA+GGG | 0.566039 | 3.3:-73252197 | MS.gene75436:CDS |
| ACAATACTTTCACCAAGTAC+AGG | 0.566632 | 3.3:-73253361 | MS.gene75436:CDS |
| CAGCAAGGCTCTGAAGGACA+TGG | 0.566832 | 3.3:+73252297 | None:intergenic |
| GCAGTTCCAGGAGAACTAGC+TGG | 0.567970 | 3.3:-73254557 | MS.gene75436:CDS |
| GTTGTTCCCATGCCTTGTGA+AGG | 0.569302 | 3.3:+73254534 | None:intergenic |
| GGTCCACAAGCTTTGTATGG+TGG | 0.569960 | 3.3:-73254284 | MS.gene75436:CDS |
| AGAACCTTGAGAACAATAGT+TGG | 0.571389 | 3.3:+73253214 | None:intergenic |
| TGGAATCAGATAAATGATCA+TGG | 0.571447 | 3.3:-73253463 | MS.gene75436:CDS |
| AATAGTACTCAACAATGAGA+TGG | 0.573475 | 3.3:-73253338 | MS.gene75436:CDS |
| AAAGCAGTAGTAGGTGCAAG+TGG | 0.574642 | 3.3:-73253089 | MS.gene75436:CDS |
| GGATCCCAAGGGAACCAGAA+AGG | 0.575413 | 3.3:+73253761 | None:intergenic |
| GGATGGATGTTATCCAAGAA+GGG | 0.577595 | 3.3:-73255335 | MS.gene75436:CDS |
| TCAGTGATTCTTGCTAGTAG+AGG | 0.579772 | 3.3:-73254476 | MS.gene75436:CDS |
| GTATGCCTCCTCCTTCAGGT+GGG | 0.584516 | 3.3:-73254130 | MS.gene75436:CDS |
| ACCATACCTTCACATGCAGA+TGG | 0.585318 | 3.3:-73254441 | MS.gene75436:CDS |
| CATGGAAAACTCTTGAAAGC+AGG | 0.586551 | 3.3:-73254362 | MS.gene75436:CDS |
| AGAACTGGACAACAGTGACC+GGG | 0.586985 | 3.3:-73252370 | MS.gene75436:CDS |
| AGAAAGTTCAAAGTGGTCCC+CGG | 0.588081 | 3.3:+73252352 | None:intergenic |
| AGCAGTTTCTCTCATATCAA+AGG | 0.589334 | 3.3:+73255191 | None:intergenic |
| AGCTGGCCTTCACAAGGCAT+GGG | 0.593280 | 3.3:-73254540 | MS.gene75436:CDS |
| ACGAAATTGGCAGGAGCAGG+CGG | 0.593667 | 3.3:+73253271 | None:intergenic |
| TCAAATATATCGAATGACAT+TGG | 0.595472 | 3.3:-73254407 | MS.gene75436:CDS |
| ATTCCACCATACAAAGCTTG+TGG | 0.596836 | 3.3:+73254281 | None:intergenic |
| GACATATTGTCCCACCAGCA+AGG | 0.600088 | 3.3:+73252282 | None:intergenic |
| CTGCCAATTTCGTCGTGCCG+GGG | 0.602376 | 3.3:-73253261 | MS.gene75436:CDS |
| TTCAGTTAGAATGAATCTTG+GGG | 0.603643 | 3.3:-73253707 | MS.gene75436:CDS |
| AACAAAGAGGAGGCATGCGA+TGG | 0.603767 | 3.3:+73255470 | None:intergenic |
| AAAGATGTTCAGAAGGCTGG+AGG | 0.604111 | 3.3:-73254239 | MS.gene75436:CDS |
| GTTAGCTAATGGTGTAGCAA+AGG | 0.604530 | 3.3:-73255214 | MS.gene75436:CDS |
| TCCAAAATAAATAAAGGTGT+AGG | 0.605868 | 3.3:-73252230 | MS.gene75436:CDS |
| AGTAGTGTATTTGCACCACA+TGG | 0.606382 | 3.3:-73254380 | MS.gene75436:CDS |
| AGGGAACCAGAAAGGCCTGA+AGG | 0.606461 | 3.3:+73253769 | None:intergenic |
| CATACCTGATGATAGACCCT+AGG | 0.617223 | 3.3:+73252981 | None:intergenic |
| GAAATACGAATTTACTGTAG+TGG | 0.620251 | 3.3:+73253390 | None:intergenic |
| TATGATTCAAGTCATTATGG+TGG | 0.621095 | 3.3:-73253589 | MS.gene75436:CDS |
| ATTTGAGGCCCACCTGAAGG+AGG | 0.625374 | 3.3:+73254122 | None:intergenic |
| AGAACTAGCTGGCCTTCACA+AGG | 0.628697 | 3.3:-73254546 | MS.gene75436:CDS |
| CTACTAGCAAGAATCACTGA+TGG | 0.635765 | 3.3:+73254479 | None:intergenic |
| TAAAGGTGTAGGAAAGCTTG+TGG | 0.635981 | 3.3:-73252219 | MS.gene75436:CDS |
| CACAAGGCATGGGAACAACA+TGG | 0.636359 | 3.3:-73254530 | MS.gene75436:CDS |
| GTTGTCAGTTCAGCTTCAAG+TGG | 0.641203 | 3.3:-73255267 | MS.gene75436:CDS |
| CTGAAGGAGGAGGCATACCA+AGG | 0.655629 | 3.3:+73254135 | None:intergenic |
| AGTACCTTGGAAGCATGAAG+AGG | 0.656955 | 3.3:+73255168 | None:intergenic |
| AAGATGTTCAGAAGGCTGGA+GGG | 0.658153 | 3.3:-73254238 | MS.gene75436:CDS |
| ATGCCAAACTGGAAACAAAG+AGG | 0.660398 | 3.3:+73255457 | None:intergenic |
| TGGGATCCATAGAGAAATCG+AGG | 0.663794 | 3.3:-73253746 | MS.gene75436:CDS |
| GCAGTAGTAGGTGCAAGTGG+AGG | 0.669154 | 3.3:-73253086 | MS.gene75436:CDS |
| TCGATGCTCGAAGATTGGGA+TGG | 0.670453 | 3.3:-73255352 | MS.gene75436:CDS |
| ACTACTTTGAAGGCAAATGG+TGG | 0.671606 | 3.3:-73254590 | MS.gene75436:CDS |
| GATGGATGTTATCCAAGAAG+GGG | 0.675440 | 3.3:-73255334 | MS.gene75436:CDS |
| CCAAACTGGAAACAAAGAGG+AGG | 0.676783 | 3.3:+73255460 | None:intergenic |
| TATGCAGCTGATACCTAATG+TGG | 0.679757 | 3.3:-73252402 | MS.gene75436:intron |
| GAGAACAATAGTTGGTGACA+TGG | 0.682147 | 3.3:+73253222 | None:intergenic |
| TATTAGCAGAAAGTTCAAAG+TGG | 0.683177 | 3.3:+73252345 | None:intergenic |
| GTAAGTGATCCAAGAAAGGG+TGG | 0.686908 | 3.3:-73252194 | MS.gene75436:CDS |
| CTCCTGGAACTGCTACCGAG+AGG | 0.707943 | 3.3:+73254567 | None:intergenic |
| ATGGATGTTATCCAAGAAGG+GGG | 0.708511 | 3.3:-73255333 | MS.gene75436:CDS |
| GATTTCTCTATGGATCCCAA+GGG | 0.710706 | 3.3:+73253750 | None:intergenic |
| GAACTGGACAACAGTGACCG+GGG | 0.715377 | 3.3:-73252369 | MS.gene75436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTTGTATATAAATAATTT+AGG | + | chr3.3:73255015-73255034 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAAAATGATCAA+TGG | + | chr3.3:73255152-73255171 | None:intergenic | 10.0% |
| !! | ATATGTTATAATAAGAAACT+AGG | - | chr3.3:73253338-73253357 | MS.gene75436:CDS | 15.0% |
| !! | TAAAAATATGAAGATAAATG+TGG | - | chr3.3:73255164-73255183 | MS.gene75436:intron | 15.0% |
| !! | TCCTATTTATAAAAATAGAT+GGG | - | chr3.3:73253636-73253655 | MS.gene75436:CDS | 15.0% |
| !! | TTAACTTAGTAAAGTATAAT+TGG | - | chr3.3:73255039-73255058 | MS.gene75436:intron | 15.0% |
| !! | TTCCTATTTATAAAAATAGA+TGG | - | chr3.3:73253635-73253654 | MS.gene75436:CDS | 15.0% |
| !!! | TAACTCAATATTTTAAAAAC+TGG | + | chr3.3:73253774-73253793 | None:intergenic | 15.0% |
| !! | ACATGAAAAATAGTTATAAG+TGG | - | chr3.3:73254907-73254926 | MS.gene75436:intron | 20.0% |
| !! | CATGAAAAATAGTTATAAGT+GGG | - | chr3.3:73254908-73254927 | MS.gene75436:intron | 20.0% |
| !! | CCACTATTTAATTAAAATCT+TGG | + | chr3.3:73252571-73252590 | None:intergenic | 20.0% |
| !! | CCTATTTATAAAAATAGATG+GGG | - | chr3.3:73253637-73253656 | MS.gene75436:CDS | 20.0% |
| !! | CTATTTATAAAAATAGATGG+GGG | - | chr3.3:73253638-73253657 | MS.gene75436:CDS | 20.0% |
| !! | GAACATTCCAAAATAAATAA+AGG | - | chr3.3:73255437-73255456 | MS.gene75436:CDS | 20.0% |
| !! | TCAGTTATATTTACAAAATC+AGG | + | chr3.3:73253994-73254013 | None:intergenic | 20.0% |
| !!! | AGATTTTAATTAAATAGTGG+CGG | - | chr3.3:73252571-73252590 | MS.gene75436:intron | 20.0% |
| !!! | CATATTTTTTGCTTATATTC+TGG | - | chr3.3:73254738-73254757 | MS.gene75436:intron | 20.0% |
| !!! | CCAAGATTTTAATTAAATAG+TGG | - | chr3.3:73252568-73252587 | MS.gene75436:intron | 20.0% |
| ! | AAAGTACACTGTTAAACAAA+AGG | - | chr3.3:73253481-73253500 | MS.gene75436:intron | 25.0% |
| ! | ACTACAGTAAATTCGTATTT+CGG | - | chr3.3:73254285-73254304 | MS.gene75436:CDS | 25.0% |
| ! | ACTGCAATTAATTAAATTGC+TGG | + | chr3.3:73254163-73254182 | None:intergenic | 25.0% |
| ! | ACTTATGATTCAAGTCATTA+TGG | - | chr3.3:73254081-73254100 | MS.gene75436:intron | 25.0% |
| ! | CAATAACATCATTAAAACCT+AGG | - | chr3.3:73254829-73254848 | MS.gene75436:intron | 25.0% |
| ! | CCAAGAAAATCTATAGATAT+AGG | + | chr3.3:73253509-73253528 | None:intergenic | 25.0% |
| ! | GAAAAAATGGATGTATCATA+TGG | + | chr3.3:73253042-73253061 | None:intergenic | 25.0% |
| ! | TCAAAAATTATTCTGCAATG+TGG | + | chr3.3:73254486-73254505 | None:intergenic | 25.0% |
| ! | TCAAATATATCGAATGACAT+TGG | - | chr3.3:73253266-73253285 | MS.gene75436:CDS | 25.0% |
| ! | TCCTTATATAGAAAAGAACA+CGG | + | chr3.3:73253597-73253616 | None:intergenic | 25.0% |
| ! | TTCTCATAATATACCACATT+AGG | + | chr3.3:73255287-73255306 | None:intergenic | 25.0% |
| ! | TTTAGTTAAAGATGTTCAGA+AGG | - | chr3.3:73253427-73253446 | MS.gene75436:CDS | 25.0% |
| ! | TTTCAGTTAGAATGAATCTT+GGG | - | chr3.3:73253965-73253984 | MS.gene75436:intron | 25.0% |
| !! | AATGAGAAGAGAAAATTTTG+AGG | + | chr3.3:73252960-73252979 | None:intergenic | 25.0% |
| !! | CCTATATCTATAGATTTTCT+TGG | - | chr3.3:73253506-73253525 | MS.gene75436:intron | 25.0% |
| !! | TCCAAAATAAATAAAGGTGT+AGG | - | chr3.3:73255443-73255462 | MS.gene75436:CDS | 25.0% |
| !! | TGTAATATTTGTGTTACTAC+AGG | - | chr3.3:73254550-73254569 | MS.gene75436:CDS | 25.0% |
| !! | TTCTAGAAATTTATTCTCTG+TGG | + | chr3.3:73252860-73252879 | None:intergenic | 25.0% |
| !! | TTTTCAGTTAGAATGAATCT+TGG | - | chr3.3:73253964-73253983 | MS.gene75436:intron | 25.0% |
| !! | TTTTCCCTGTCAATAAAAAA+GGG | - | chr3.3:73253823-73253842 | MS.gene75436:intron | 25.0% |
| !! | TTTTTCCCTGTCAATAAAAA+AGG | - | chr3.3:73253822-73253841 | MS.gene75436:intron | 25.0% |
| !!! | ATAACATTTTGAGTTTTCCT+AGG | + | chr3.3:73254849-73254868 | None:intergenic | 25.0% |
| !!! | CCCCATCTATTTTTATAAAT+AGG | + | chr3.3:73253640-73253659 | None:intergenic | 25.0% |
| !!! | TCCTACACCTTTATTTATTT+TGG | + | chr3.3:73255447-73255466 | None:intergenic | 25.0% |
| AATAGTACTCAACAATGAGA+TGG | - | chr3.3:73254335-73254354 | MS.gene75436:CDS | 30.0% | |
| AGTAAGAAAAGTCTAGTAGA+TGG | - | chr3.3:73252767-73252786 | MS.gene75436:intron | 30.0% | |
| ATCTTGGAAACTATATGCAA+AGG | + | chr3.3:73252555-73252574 | None:intergenic | 30.0% | |
| ATGGAATCTTACATTTGTTC+TGG | - | chr3.3:73254712-73254731 | MS.gene75436:intron | 30.0% | |
| ATGTGGTATATTATGAGAAC+TGG | - | chr3.3:73255288-73255307 | MS.gene75436:CDS | 30.0% | |
| ATTCAGAGCTATGTGAAATA+TGG | - | chr3.3:73254770-73254789 | MS.gene75436:intron | 30.0% | |
| ATTTGTTTGGAAAAACCATG+TGG | - | chr3.3:73252708-73252727 | MS.gene75436:intron | 30.0% | |
| CATACATATCCTGGAAAAAA+TGG | + | chr3.3:73253055-73253074 | None:intergenic | 30.0% | |
| GAAATACGAATTTACTGTAG+TGG | + | chr3.3:73254286-73254305 | None:intergenic | 30.0% | |
| GATATAATTGACACATGGTT+AGG | - | chr3.3:73252792-73252811 | MS.gene75436:intron | 30.0% | |
| TATGATTCAAGTCATTATGG+TGG | - | chr3.3:73254084-73254103 | MS.gene75436:intron | 30.0% | |
| TATTAGCAGAAAGTTCAAAG+TGG | + | chr3.3:73255331-73255350 | None:intergenic | 30.0% | |
| TCATCAGTTATGTGATTGAT+TGG | + | chr3.3:73255226-73255245 | None:intergenic | 30.0% | |
| TGAACTTTCTGCTAATATCA+GGG | - | chr3.3:73255334-73255353 | MS.gene75436:CDS | 30.0% | |
| TGAGAAATTAACTCACCATA+TGG | - | chr3.3:73255243-73255262 | MS.gene75436:CDS | 30.0% | |
| TGGAATCAGATAAATGATCA+TGG | - | chr3.3:73254210-73254229 | MS.gene75436:CDS | 30.0% | |
| TGGATGATATAATTGACACA+TGG | - | chr3.3:73252787-73252806 | MS.gene75436:intron | 30.0% | |
| TTCAGTTAGAATGAATCTTG+GGG | - | chr3.3:73253966-73253985 | MS.gene75436:intron | 30.0% | |
| TTCATTCATTCCCTCTTTAT+AGG | - | chr3.3:73254187-73254206 | MS.gene75436:CDS | 30.0% | |
| TTGAACTTTCTGCTAATATC+AGG | - | chr3.3:73255333-73255352 | MS.gene75436:CDS | 30.0% | |
| TTTCTTGGATTAAAGATCCT+TGG | - | chr3.3:73253521-73253540 | MS.gene75436:intron | 30.0% | |
| ! | ACCGTGTTCTTTTCTATATA+AGG | - | chr3.3:73253593-73253612 | MS.gene75436:CDS | 30.0% |
| ! | CTTTTGAATCACTTTGTCAA+AGG | - | chr3.3:73254641-73254660 | MS.gene75436:intron | 30.0% |
| !! | GTTTAACAGTGTACTTTTTG+AGG | + | chr3.3:73253478-73253497 | None:intergenic | 30.0% |
| !! | TGTTTTTGTGTGTCCATTTT+TGG | + | chr3.3:73252251-73252270 | None:intergenic | 30.0% |
| !! | TTATGTGATTGATTGGTTTG+AGG | + | chr3.3:73255219-73255238 | None:intergenic | 30.0% |
| !! | TTTTAATTAAATAGTGGCGG+TGG | - | chr3.3:73252574-73252593 | MS.gene75436:intron | 30.0% |
| !!! | AGTGTTTTGATATGTCAACA+CGG | + | chr3.3:73252654-73252673 | None:intergenic | 30.0% |
| !!! | ATGATACATCCATTTTTTCC+AGG | - | chr3.3:73253043-73253062 | MS.gene75436:CDS | 30.0% |
| !!! | CATTTTTTCCAGGATATGTA+TGG | - | chr3.3:73253053-73253072 | MS.gene75436:CDS | 30.0% |
| !!! | TAAGCCCTTTTTTATTGACA+GGG | + | chr3.3:73253830-73253849 | None:intergenic | 30.0% |
| !!! | TCCTTGGAAACATTTTTTAC+AGG | + | chr3.3:73254375-73254394 | None:intergenic | 30.0% |
| AACCCAACTGCAATGTAAAT+GGG | - | chr3.3:73253688-73253707 | MS.gene75436:CDS | 35.0% | |
| AATGAAAAGGACACATGTAG+AGG | - | chr3.3:73252739-73252758 | MS.gene75436:intron | 35.0% | |
| ACAATACTTTCACCAAGTAC+AGG | - | chr3.3:73254312-73254331 | MS.gene75436:CDS | 35.0% | |
| AGAACCTTGAGAACAATAGT+TGG | + | chr3.3:73254462-73254481 | None:intergenic | 35.0% | |
| AGCAGTTTCTCTCATATCAA+AGG | + | chr3.3:73252485-73252504 | None:intergenic | 35.0% | |
| ATCCCATTTACATTGCAGTT+GGG | + | chr3.3:73253693-73253712 | None:intergenic | 35.0% | |
| ATCTACTTGTAGTCTCATCT+TGG | - | chr3.3:73254867-73254886 | MS.gene75436:intron | 35.0% | |
| ATCTGATTCCACCTATAAAG+AGG | + | chr3.3:73254201-73254220 | None:intergenic | 35.0% | |
| ATTCATTCCCTCTTTATAGG+TGG | - | chr3.3:73254190-73254209 | MS.gene75436:CDS | 35.0% | |
| CTAAGAGCAATTGCAAAGTT+TGG | - | chr3.3:73253368-73253387 | MS.gene75436:CDS | 35.0% | |
| GAAGTAATCATTGCTCATCA+TGG | - | chr3.3:73252277-73252296 | MS.gene75436:CDS | 35.0% | |
| GAATCACTTTGTCAAAGGAA+TGG | - | chr3.3:73254646-73254665 | MS.gene75436:intron | 35.0% | |
| GATGACATAACTCTATACGT+AGG | + | chr3.3:73254984-73255003 | None:intergenic | 35.0% | |
| GCCTGTAAAAAATGTTTCCA+AGG | - | chr3.3:73254371-73254390 | MS.gene75436:CDS | 35.0% | |
| TAACTTACCAGCATCATTTG+AGG | + | chr3.3:73253569-73253588 | None:intergenic | 35.0% | |
| TCTATACGTAGGACTAAGTT+AGG | + | chr3.3:73254973-73254992 | None:intergenic | 35.0% | |
| TCTGATTCCACCTATAAAGA+GGG | + | chr3.3:73254200-73254219 | None:intergenic | 35.0% | |
| TGGCTGCAGTTATGTTATTA+TGG | - | chr3.3:73252176-73252195 | MS.gene75436:CDS | 35.0% | |
| TGTGGTGTAGAGAAATGAAA+AGG | - | chr3.3:73252726-73252745 | MS.gene75436:intron | 35.0% | |
| TTGAGTACTATTCCTGTACT+TGG | + | chr3.3:73254327-73254346 | None:intergenic | 35.0% | |
| TTTCAACACTTGAGCAAACT+TGG | + | chr3.3:73254040-73254059 | None:intergenic | 35.0% | |
| TTTCATTTCTCTACACCACA+TGG | + | chr3.3:73252726-73252745 | None:intergenic | 35.0% | |
| ! | AACACTACTTTGAAGGCAAA+TGG | - | chr3.3:73253080-73253099 | MS.gene75436:CDS | 35.0% |
| ! | AGCTAACCTAAGAAGCATAA+AGG | + | chr3.3:73252446-73252465 | None:intergenic | 35.0% |
| ! | ATGCTTCTTAGGTTAGCTAA+TGG | - | chr3.3:73252448-73252467 | MS.gene75436:intron | 35.0% |
| ! | ATTTGTGTTACTACAGGACA+GGG | - | chr3.3:73254556-73254575 | MS.gene75436:CDS | 35.0% |
| ! | TATTTGTGTTACTACAGGAC+AGG | - | chr3.3:73254555-73254574 | MS.gene75436:CDS | 35.0% |
| ! | TTTTTCCAGGATATGTATGG+TGG | - | chr3.3:73253056-73253075 | MS.gene75436:CDS | 35.0% |
| !! | TAAAAACTGGTTTGAACTGC+CGG | + | chr3.3:73253761-73253780 | None:intergenic | 35.0% |
| !! | TGCATGATTGAAAAGTACCT+TGG | + | chr3.3:73252521-73252540 | None:intergenic | 35.0% |
| !!! | CTAAGCCCTTTTTTATTGAC+AGG | + | chr3.3:73253831-73253850 | None:intergenic | 35.0% |
| !!! | GGAAACATTTTTTACAGGCA+TGG | + | chr3.3:73254370-73254389 | None:intergenic | 35.0% |
| !!! | TTTTTTCCATCTGCATGTGA+AGG | + | chr3.3:73253241-73253260 | None:intergenic | 35.0% |
| AACAACATGGAAAGCTTCCA+TGG | - | chr3.3:73253156-73253175 | MS.gene75436:intron | 40.0% | |
| ACCCTTTCTTGGATCACTTA+CGG | + | chr3.3:73255480-73255499 | None:intergenic | 40.0% | |
| AGGGAAAGCCTTAGAAGTAA+GGG | - | chr3.3:73255353-73255372 | MS.gene75436:CDS | 40.0% | |
| AGTAGTGTATTTGCACCACA+TGG | - | chr3.3:73253293-73253312 | MS.gene75436:CDS | 40.0% | |
| AGTTCAGCTTCAAGTGGTAT+TGG | - | chr3.3:73252412-73252431 | MS.gene75436:intron | 40.0% | |
| ATGCCAAACTGGAAACAAAG+AGG | + | chr3.3:73252219-73252238 | None:intergenic | 40.0% | |
| ATGGATGTTATCCAAGAAGG+GGG | - | chr3.3:73252340-73252359 | MS.gene75436:CDS | 40.0% | |
| ATTCCACCATACAAAGCTTG+TGG | + | chr3.3:73253395-73253414 | None:intergenic | 40.0% | |
| CAACCCAACTGCAATGTAAA+TGG | - | chr3.3:73253687-73253706 | MS.gene75436:CDS | 40.0% | |
| CAGCTGCATAATCAACCATA+TGG | + | chr3.3:73255261-73255280 | None:intergenic | 40.0% | |
| CAGTGATTCTTGCTAGTAGA+GGG | - | chr3.3:73253198-73253217 | MS.gene75436:intron | 40.0% | |
| CATGGAAAACTCTTGAAAGC+AGG | - | chr3.3:73253311-73253330 | MS.gene75436:CDS | 40.0% | |
| CGAATTTACTGTAGTGGTCA+TGG | + | chr3.3:73254280-73254299 | None:intergenic | 40.0% | |
| CTACTAGCAAGAATCACTGA+TGG | + | chr3.3:73253197-73253216 | None:intergenic | 40.0% | |
| CTGTAACAGAAAGATGAGAG+TGG | + | chr3.3:73253854-73253873 | None:intergenic | 40.0% | |
| GATCCCATTTACATTGCAGT+TGG | + | chr3.3:73253694-73253713 | None:intergenic | 40.0% | |
| GATGGATGTTATCCAAGAAG+GGG | - | chr3.3:73252339-73252358 | MS.gene75436:CDS | 40.0% | |
| GATTATTGCTGCAACTTCAG+AGG | - | chr3.3:73254616-73254635 | MS.gene75436:intron | 40.0% | |
| GATTTCTCTATGGATCCCAA+GGG | + | chr3.3:73253926-73253945 | None:intergenic | 40.0% | |
| GGAGCAGTTACAGAAGAAAA+AGG | + | chr3.3:73254674-73254693 | None:intergenic | 40.0% | |
| GGATGGATGTTATCCAAGAA+GGG | - | chr3.3:73252338-73252357 | MS.gene75436:CDS | 40.0% | |
| GGCATTACAAGTCTATTCCA+TGG | + | chr3.3:73253176-73253195 | None:intergenic | 40.0% | |
| GTAAATGGGATCAAACCAAC+CGG | - | chr3.3:73253702-73253721 | MS.gene75436:CDS | 40.0% | |
| GTCACCAACTATTGTTCTCA+AGG | - | chr3.3:73254455-73254474 | MS.gene75436:CDS | 40.0% | |
| GTTAAAGATGTTCAGAAGGC+TGG | - | chr3.3:73253431-73253450 | MS.gene75436:CDS | 40.0% | |
| GTTAGCTAATGGTGTAGCAA+AGG | - | chr3.3:73252459-73252478 | MS.gene75436:intron | 40.0% | |
| GTTGAACAACGATTGTACCA+CGG | + | chr3.3:73253671-73253690 | None:intergenic | 40.0% | |
| TATGCAGCTGATACCTAATG+TGG | - | chr3.3:73255271-73255290 | MS.gene75436:CDS | 40.0% | |
| TCAAAGCCTCGATTTCTCTA+TGG | + | chr3.3:73253936-73253955 | None:intergenic | 40.0% | |
| TCAGTGATTCTTGCTAGTAG+AGG | - | chr3.3:73253197-73253216 | MS.gene75436:intron | 40.0% | |
| TTCTTCTGTAACTGCTCCTA+GGG | - | chr3.3:73254676-73254695 | MS.gene75436:intron | 40.0% | |
| TTGAACAACGATTGTACCAC+GGG | + | chr3.3:73253670-73253689 | None:intergenic | 40.0% | |
| TTTCTTCTGTAACTGCTCCT+AGG | - | chr3.3:73254675-73254694 | MS.gene75436:intron | 40.0% | |
| ! | ACTACTTTGAAGGCAAATGG+TGG | - | chr3.3:73253083-73253102 | MS.gene75436:CDS | 40.0% |
| ! | GCTTTCAAGAGTTTTCCATG+TGG | + | chr3.3:73253311-73253330 | None:intergenic | 40.0% |
| ! | GCTTTGTATGGTGGAATAGT+TGG | - | chr3.3:73253398-73253417 | MS.gene75436:CDS | 40.0% |
| ! | TAAAGGTGTAGGAAAGCTTG+TGG | - | chr3.3:73255454-73255473 | MS.gene75436:CDS | 40.0% |
| ! | TTTGGTCCACAAGCTTTGTA+TGG | - | chr3.3:73253386-73253405 | MS.gene75436:CDS | 40.0% |
| !! | GAGAACAATAGTTGGTGACA+TGG | + | chr3.3:73254454-73254473 | None:intergenic | 40.0% |
| !! | GTTGGTGACATGGATGATAA+TGG | + | chr3.3:73254444-73254463 | None:intergenic | 40.0% |
| AAAGATGTTCAGAAGGCTGG+AGG | - | chr3.3:73253434-73253453 | MS.gene75436:CDS | 45.0% | |
| AAAGCAGTAGTAGGTGCAAG+TGG | - | chr3.3:73254584-73254603 | MS.gene75436:CDS | 45.0% | |
| AAGATGTTCAGAAGGCTGGA+GGG | - | chr3.3:73253435-73253454 | MS.gene75436:CDS | 45.0% | |
| ACCATACCTTCACATGCAGA+TGG | - | chr3.3:73253232-73253251 | MS.gene75436:CDS | 45.0% | |
| AGAAAGTTCAAAGTGGTCCC+CGG | + | chr3.3:73255324-73255343 | None:intergenic | 45.0% | |
| AGGGAAGTGAAAGCAGTAGT+AGG | - | chr3.3:73254575-73254594 | MS.gene75436:CDS | 45.0% | |
| ATCGTCGATGCTCGAAGATT+GGG | - | chr3.3:73252317-73252336 | MS.gene75436:CDS | 45.0% | |
| CAGGGAAAGCCTTAGAAGTA+AGG | - | chr3.3:73255352-73255371 | MS.gene75436:CDS | 45.0% | |
| CATACCTGATGATAGACCCT+AGG | + | chr3.3:73254695-73254714 | None:intergenic | 45.0% | |
| CCAAACTGGAAACAAAGAGG+AGG | + | chr3.3:73252216-73252235 | None:intergenic | 45.0% | |
| CGATTTCTCTATGGATCCCA+AGG | + | chr3.3:73253927-73253946 | None:intergenic | 45.0% | |
| CGCACTTGCAGTCATTTGTT+TGG | - | chr3.3:73252695-73252714 | MS.gene75436:intron | 45.0% | |
| CTAGGGTCTATCATCAGGTA+TGG | - | chr3.3:73254693-73254712 | MS.gene75436:intron | 45.0% | |
| GCACAATATGAGCTTCCTTC+AGG | - | chr3.3:73253889-73253908 | MS.gene75436:intron | 45.0% | |
| GCATCTGCTTCTGCCAAAAA+TGG | - | chr3.3:73252235-73252254 | MS.gene75436:CDS | 45.0% | |
| GCCGTAAGTGATCCAAGAAA+GGG | - | chr3.3:73255476-73255495 | MS.gene75436:CDS | 45.0% | |
| GGATGTACAGCAAGATCACA+AGG | - | chr3.3:73255185-73255204 | MS.gene75436:CDS | 45.0% | |
| GGGATGGATGTTATCCAAGA+AGG | - | chr3.3:73252337-73252356 | MS.gene75436:CDS | 45.0% | |
| GTAAGTGATCCAAGAAAGGG+TGG | - | chr3.3:73255479-73255498 | MS.gene75436:CDS | 45.0% | |
| GTTGTCAGTTCAGCTTCAAG+TGG | - | chr3.3:73252406-73252425 | MS.gene75436:intron | 45.0% | |
| TCCATCTGCATGTGAAGGTA+TGG | + | chr3.3:73253236-73253255 | None:intergenic | 45.0% | |
| TGGGATCCATAGAGAAATCG+AGG | - | chr3.3:73253927-73253946 | MS.gene75436:intron | 45.0% | |
| TGGTGGCAACACTACTTTGA+AGG | - | chr3.3:73253073-73253092 | MS.gene75436:CDS | 45.0% | |
| TGTTGCCACCATACATATCC+TGG | + | chr3.3:73253064-73253083 | None:intergenic | 45.0% | |
| ! | AGTACCTTGGAAGCATGAAG+AGG | + | chr3.3:73252508-73252527 | None:intergenic | 45.0% |
| ! | CCTCCTCTTTGTTTCCAGTT+TGG | - | chr3.3:73252213-73252232 | MS.gene75436:CDS | 45.0% |
| ! | TCAGCTTCAAGTGGTATTGG+TGG | - | chr3.3:73252415-73252434 | MS.gene75436:intron | 45.0% |
| !! | GATGATAATGGTCTCTTCCC+CGG | + | chr3.3:73254432-73254451 | None:intergenic | 45.0% |
| AATGGGATCAAACCAACCGG+CGG | - | chr3.3:73253705-73253724 | MS.gene75436:CDS | 50.0% | |
| AGAACTGGACAACAGTGACC+GGG | - | chr3.3:73255303-73255322 | MS.gene75436:CDS | 50.0% | |
| AGGTTGAACCGGAAACCAGA+CGG | + | chr3.3:73253732-73253751 | None:intergenic | 50.0% | |
| ATCTGATGCAGCCTCAATCG+CGG | - | chr3.3:73252619-73252638 | MS.gene75436:intron | 50.0% | |
| ATGACTGCAAGTGCGCAACT+TGG | + | chr3.3:73252690-73252709 | None:intergenic | 50.0% | |
| CACAAGGCATGGGAACAACA+TGG | - | chr3.3:73253143-73253162 | MS.gene75436:intron | 50.0% | |
| GACATATTGTCCCACCAGCA+AGG | + | chr3.3:73255394-73255413 | None:intergenic | 50.0% | |
| GAGAACTGGACAACAGTGAC+CGG | - | chr3.3:73255302-73255321 | MS.gene75436:CDS | 50.0% | |
| GATCGTCGATGCTCGAAGAT+TGG | - | chr3.3:73252316-73252335 | MS.gene75436:CDS | 50.0% | |
| GCAGGAAAACCACCCTTTCT+TGG | + | chr3.3:73255491-73255510 | None:intergenic | 50.0% | |
| GCGGTGCCTTTATGCTTCTT+AGG | - | chr3.3:73252437-73252456 | MS.gene75436:intron | 50.0% | |
| GGACATGGCCCTTACTTCTA+AGG | + | chr3.3:73255364-73255383 | None:intergenic | 50.0% | |
| GGCCGTAAGTGATCCAAGAA+AGG | - | chr3.3:73255475-73255494 | MS.gene75436:CDS | 50.0% | |
| GGCTGGAGGGATATTGACAT+TGG | - | chr3.3:73253448-73253467 | MS.gene75436:CDS | 50.0% | |
| GTTGTTCCCATGCCTTGTGA+AGG | + | chr3.3:73253142-73253161 | None:intergenic | 50.0% | |
| GTTTGAACTGCCGGATCAAC+AGG | + | chr3.3:73253752-73253771 | None:intergenic | 50.0% | |
| TCCGGTTCAACCTGTTGATC+CGG | - | chr3.3:73253739-73253758 | MS.gene75436:CDS | 50.0% | |
| TCGATGCTCGAAGATTGGGA+TGG | - | chr3.3:73252321-73252340 | MS.gene75436:CDS | 50.0% | |
| TGCTCCTAGGGTCTATCATC+AGG | - | chr3.3:73254688-73254707 | MS.gene75436:intron | 50.0% | |
| TGCTCCTCTTCATGCTTCCA+AGG | - | chr3.3:73252501-73252520 | MS.gene75436:intron | 50.0% | |
| TGTGGCTGCTGCTCTTTGTT+TGG | - | chr3.3:73252381-73252400 | MS.gene75436:CDS | 50.0% | |
| TTAAATAGTGGCGGTGGACG+AGG | - | chr3.3:73252580-73252599 | MS.gene75436:intron | 50.0% | |
| ! | AACAAAGAGGAGGCATGCGA+TGG | + | chr3.3:73252206-73252225 | None:intergenic | 50.0% |
| ! | AGAAAGGGTGGTTTTCCTGC+AGG | - | chr3.3:73255491-73255510 | MS.gene75436:CDS | 50.0% |
| ! | ATCATTTGAGGCCCACCTGA+AGG | + | chr3.3:73253557-73253576 | None:intergenic | 50.0% |
| ! | GGTCCACAAGCTTTGTATGG+TGG | - | chr3.3:73253389-73253408 | MS.gene75436:CDS | 50.0% |
| ! | GTGGCTGCTGCTCTTTGTTT+GGG | - | chr3.3:73252382-73252401 | MS.gene75436:CDS | 50.0% |
| !! | AGAACTAGCTGGCCTTCACA+AGG | - | chr3.3:73253127-73253146 | MS.gene75436:intron | 50.0% |
| !! | CTTCGAGCATCGACGATCAT+CGG | + | chr3.3:73252314-73252333 | None:intergenic | 50.0% |
| !! | GCTTCAAGTGGTATTGGTGG+CGG | - | chr3.3:73252418-73252437 | MS.gene75436:intron | 50.0% |
| ACATGCAGTGGATGCAGCTG+TGG | - | chr3.3:73252363-73252382 | MS.gene75436:CDS | 55.0% | |
| ACGAAATTGGCAGGAGCAGG+CGG | + | chr3.3:73254405-73254424 | None:intergenic | 55.0% | |
| ACGACGAAATTGGCAGGAGC+AGG | + | chr3.3:73254408-73254427 | None:intergenic | 55.0% | |
| AGGGAACCAGAAAGGCCTGA+AGG | + | chr3.3:73253907-73253926 | None:intergenic | 55.0% | |
| AGGTGGGCCTCAAATGATGC+TGG | - | chr3.3:73253559-73253578 | MS.gene75436:intron | 55.0% | |
| CATGTCCTTCAGAGCCTTGC+TGG | - | chr3.3:73255377-73255396 | MS.gene75436:CDS | 55.0% | |
| CTTGGTATGCCTCCTCCTTC+AGG | - | chr3.3:73253539-73253558 | MS.gene75436:intron | 55.0% | |
| GAACTGGACAACAGTGACCG+GGG | - | chr3.3:73255304-73255323 | MS.gene75436:CDS | 55.0% | |
| GAAGGCAAATGGTGGCCTCT+CGG | - | chr3.3:73253091-73253110 | MS.gene75436:CDS | 55.0% | |
| GAGCTTCCTTCAGGCCTTTC+TGG | - | chr3.3:73253898-73253917 | MS.gene75436:intron | 55.0% | |
| GCAGTAGTAGGTGCAAGTGG+AGG | - | chr3.3:73254587-73254606 | MS.gene75436:CDS | 55.0% | |
| GCAGTTCCAGGAGAACTAGC+TGG | - | chr3.3:73253116-73253135 | MS.gene75436:intron | 55.0% | |
| GGATCCCAAGGGAACCAGAA+AGG | + | chr3.3:73253915-73253934 | None:intergenic | 55.0% | |
| GGCAGAAGCAGATGCCAAAC+TGG | + | chr3.3:73252230-73252249 | None:intergenic | 55.0% | |
| GTATGCCTCCTCCTTCAGGT+GGG | - | chr3.3:73253543-73253562 | MS.gene75436:intron | 55.0% | |
| GTGGGACAGCTCTCATGACA+TGG | - | chr3.3:73254926-73254945 | MS.gene75436:intron | 55.0% | |
| TCCTGCCAATTTCGTCGTGC+CGG | - | chr3.3:73254410-73254429 | MS.gene75436:CDS | 55.0% | |
| TCCTTCAGAGCCTTGCTGGT+GGG | - | chr3.3:73255381-73255400 | MS.gene75436:CDS | 55.0% | |
| ! | ATTTGAGGCCCACCTGAAGG+AGG | + | chr3.3:73253554-73253573 | None:intergenic | 55.0% |
| ! | CTGAAGGAGGAGGCATACCA+AGG | + | chr3.3:73253541-73253560 | None:intergenic | 55.0% |
| ! | GCCGGATCAACAGGTTGAAC+CGG | + | chr3.3:73253743-73253762 | None:intergenic | 55.0% |
| ! | TGAAGGCCAGCTAGTTCTCC+TGG | + | chr3.3:73253125-73253144 | None:intergenic | 55.0% |
| !! | AGCTGGCCTTCACAAGGCAT+GGG | - | chr3.3:73253133-73253152 | MS.gene75436:intron | 55.0% |
| !! | CAGCAAGGCTCTGAAGGACA+TGG | + | chr3.3:73255379-73255398 | None:intergenic | 55.0% |
| !! | CAGGCCTTTCTGGTTCCCTT+GGG | - | chr3.3:73253908-73253927 | MS.gene75436:intron | 55.0% |
| !! | TAGCTGGCCTTCACAAGGCA+TGG | - | chr3.3:73253132-73253151 | MS.gene75436:intron | 55.0% |
| !! | TCAGGCCTTTCTGGTTCCCT+TGG | - | chr3.3:73253907-73253926 | MS.gene75436:intron | 55.0% |
| AGCAGGCGGTCGAACATCCT+TGG | + | chr3.3:73254391-73254410 | None:intergenic | 60.0% | |
| CCAAGAAGGGGGACATGCAG+TGG | - | chr3.3:73252351-73252370 | MS.gene75436:CDS | 60.0% | |
| CCACTGCATGTCCCCCTTCT+TGG | + | chr3.3:73252354-73252373 | None:intergenic | 60.0% | |
| CCTGCCAATTTCGTCGTGCC+GGG | - | chr3.3:73254411-73254430 | MS.gene75436:CDS | 60.0% | |
| CTCCTGGAACTGCTACCGAG+AGG | + | chr3.3:73253109-73253128 | None:intergenic | 60.0% | |
| CTGCCAATTTCGTCGTGCCG+GGG | - | chr3.3:73254412-73254431 | MS.gene75436:CDS | 60.0% | |
| CTTCCCCGGCACGACGAAAT+TGG | + | chr3.3:73254418-73254437 | None:intergenic | 60.0% | |
| GGTATGCCTCCTCCTTCAGG+TGG | - | chr3.3:73253542-73253561 | MS.gene75436:intron | 60.0% | |
| GTCCTTCAGAGCCTTGCTGG+TGG | - | chr3.3:73255380-73255399 | MS.gene75436:CDS | 60.0% | |
| ! | TCCCACCAGCAAGGCTCTGA+AGG | + | chr3.3:73255385-73255404 | None:intergenic | 60.0% |
| !! | TAGATGGGGGCATTGTCCCG+TGG | - | chr3.3:73253651-73253670 | MS.gene75436:CDS | 60.0% |
| AAACCAACCGGCGGACCGTC+TGG | - | chr3.3:73253714-73253733 | MS.gene75436:CDS | 65.0% | |
| AAACCAGACGGTCCGCCGGT+TGG | + | chr3.3:73253720-73253739 | None:intergenic | 65.0% | |
| CCCGGCACGACGAAATTGGC+AGG | + | chr3.3:73254414-73254433 | None:intergenic | 65.0% | |
| GGCCTCTCGGTAGCAGTTCC+AGG | - | chr3.3:73253104-73253123 | MS.gene75436:CDS | 65.0% | |
| GGTCAGCGCAACCGCGATTG+AGG | + | chr3.3:73252633-73252652 | None:intergenic | 65.0% | |
| TGAGGCCCACCTGAAGGAGG+AGG | + | chr3.3:73253551-73253570 | None:intergenic | 65.0% | |
| CCGGAAACCAGACGGTCCGC+CGG | + | chr3.3:73253724-73253743 | None:intergenic | 70.0% | |
| ! | CCGGCGGACCGTCTGGTTTC+CGG | - | chr3.3:73253721-73253740 | MS.gene75436:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73252175 | 73255520 | 73252175 | ID=MS.gene75436 |
| chr3.3 | mRNA | 73252175 | 73255520 | 73252175 | ID=MS.gene75436.t1;Parent=MS.gene75436 |
| chr3.3 | exon | 73255173 | 73255520 | 73255173 | ID=MS.gene75436.t1.exon1;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73255173 | 73255520 | 73255173 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| chr3.3 | exon | 73254115 | 73254630 | 73254115 | ID=MS.gene75436.t1.exon2;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73254115 | 73254630 | 73254115 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| chr3.3 | exon | 73253586 | 73253821 | 73253586 | ID=MS.gene75436.t1.exon3;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73253586 | 73253821 | 73253586 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| chr3.3 | exon | 73253219 | 73253486 | 73253219 | ID=MS.gene75436.t1.exon4;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73253219 | 73253486 | 73253219 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| chr3.3 | exon | 73252986 | 73253123 | 73252986 | ID=MS.gene75436.t1.exon5;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73252986 | 73253123 | 73252986 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| chr3.3 | exon | 73252175 | 73252417 | 73252175 | ID=MS.gene75436.t1.exon6;Parent=MS.gene75436.t1 |
| chr3.3 | CDS | 73252175 | 73252417 | 73252175 | ID=cds.MS.gene75436.t1;Parent=MS.gene75436.t1 |
| Gene Sequence |
| Protein sequence |
