AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060280.t1 MTR_1g106765 97.207 358 10 0 1 358 1 358 0.0 713
MS.gene060280.t1 MTR_1g009690 33.179 431 196 18 6 358 4 420 1.79e-47 166
MS.gene060280.t1 MTR_1g009710 33.333 432 188 18 6 355 4 417 1.10e-45 161
MS.gene060280.t1 MTR_4g095490 39.024 205 112 5 156 358 262 455 1.47e-29 118
MS.gene060280.t1 MTR_4g095490 44.595 74 41 0 8 81 7 80 2.31e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060280.t1 AT4G33890 42.659 361 176 9 6 358 5 342 5.86e-85 261
MS.gene060280.t1 AT4G33890 42.659 361 176 9 6 358 5 342 5.86e-85 261
MS.gene060280.t1 AT2G14850 41.525 354 139 8 6 358 5 291 2.72e-80 247
MS.gene060280.t1 AT4G31440 34.794 388 184 16 10 353 8 370 2.45e-47 165
MS.gene060280.t1 AT5G67410 32.033 359 165 10 1 354 1 285 7.30e-42 148
MS.gene060280.t1 AT5G67410 32.033 359 165 10 1 354 1 285 7.30e-42 148
MS.gene060280.t1 AT2G24530 30.958 407 211 12 10 358 8 402 2.38e-41 149
MS.gene060280.t1 AT2G24530 30.958 407 211 12 10 358 8 402 2.38e-41 149

Find 92 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTAGATCCAAGGTTTC+GGG 0.184229 1.2:-79542767 None:intergenic
TCCTCTACGGGTTTATCATC+TGG 0.234652 1.2:+79543171 MS.gene060280:CDS
TGCTGTTTGCATATACCTTC+TGG 0.237048 1.2:-79543265 None:intergenic
TCTGCGCAGGGGTGGTTCTT+TGG 0.280256 1.2:+79542687 MS.gene060280:CDS
TCTCCATCTTCAACAGAAAT+AGG 0.282741 1.2:-79542853 None:intergenic
GAATTAAATCCACAAGTTCT+TGG 0.301140 1.2:+79543333 MS.gene060280:CDS
TCAAGCTGTGTGGGCCAATC+TGG 0.313228 1.2:-79543357 None:intergenic
TCTTCATAATCAACTCATTA+GGG 0.313745 1.2:+79542522 MS.gene060280:CDS
CTTGGGATATCCATGAATTC+TGG 0.317237 1.2:+79542943 MS.gene060280:CDS
CAGAGTGCTCTGGGACAGTT+AGG 0.335078 1.2:+79542739 MS.gene060280:CDS
TACTTTGAATGCTTGAGCTT+GGG 0.342324 1.2:-79542900 None:intergenic
CTCTTCATAATCAACTCATT+AGG 0.354368 1.2:+79542521 MS.gene060280:CDS
GCTGTTTGCATATACCTTCT+GGG 0.354407 1.2:-79543264 None:intergenic
AATCTTTAGATCCAAGGTTT+CGG 0.356774 1.2:-79542768 None:intergenic
TCTGTTGCACTCTGCTGCTC+TGG 0.359317 1.2:-79542805 None:intergenic
ATCTTCTTGCACATCTCTCT+TGG 0.363603 1.2:+79543293 MS.gene060280:CDS
ACTGTCCATTTCCTTGTCTT+CGG 0.375162 1.2:-79543215 None:intergenic
ATCCCAAGCGGAGCTGTAAC+AGG 0.380929 1.2:-79542928 None:intergenic
TACGAGTCGTCAGAGTGCTC+TGG 0.388281 1.2:+79542729 MS.gene060280:CDS
ATCATCTTTGAGGAGTCGTT+TGG 0.388549 1.2:+79543053 MS.gene060280:CDS
CCTTTCCTCCTTCTCTGCGC+AGG 0.410218 1.2:+79542674 MS.gene060280:CDS
CTTTGATCAGCTTGGGAAGT+TGG 0.420393 1.2:+79542429 MS.gene060280:CDS
CCTCTACGGGTTTATCATCT+GGG 0.422513 1.2:+79543172 MS.gene060280:CDS
TTACTTTGAATGCTTGAGCT+TGG 0.422875 1.2:-79542901 None:intergenic
TTATCATCTGGGTTGAGATT+CGG 0.424388 1.2:+79543183 MS.gene060280:CDS
CCTCCTATTTCTGTTGAAGA+TGG 0.424695 1.2:+79542850 MS.gene060280:CDS
GAGATATCCATTGCTGAAAC+AGG 0.424894 1.2:-79543022 None:intergenic
ACGTCCATAACCAGAATTCA+TGG 0.425839 1.2:-79542953 None:intergenic
CTTTCCTCCTTCTCTGCGCA+GGG 0.427862 1.2:+79542675 MS.gene060280:CDS
GGTTCTTTGGCTACTTGTGA+AGG 0.430531 1.2:+79542700 MS.gene060280:CDS
ATATCCATGAATTCTGGTTA+TGG 0.434201 1.2:+79542949 MS.gene060280:CDS
GAAAGCTGTTATTGTAAAGA+AGG 0.435298 1.2:+79542381 MS.gene060280:CDS
AAGATTTGCATCACGACGAT+TGG 0.436849 1.2:+79542484 MS.gene060280:CDS
CACAAGTTCTTGGACCAGAT+TGG 0.441697 1.2:+79543343 MS.gene060280:CDS
CTCCTCAAAGATGATGTGTC+AGG 0.443797 1.2:-79543045 None:intergenic
GCTGTTATTGTAAAGAAGGT+TGG 0.449917 1.2:+79542385 MS.gene060280:CDS
TCCCTGACACATCATCTTTG+AGG 0.457686 1.2:+79543043 MS.gene060280:CDS
GTACGTACTTTGATCAGCTT+GGG 0.458271 1.2:+79542422 MS.gene060280:CDS
AGGTTGGTTGATTCCTCTAC+GGG 0.470003 1.2:+79543159 MS.gene060280:CDS
GAGGTTGGTTGATTCCTCTA+CGG 0.470061 1.2:+79543158 MS.gene060280:CDS
GGTACGTACTTTGATCAGCT+TGG 0.478644 1.2:+79542421 MS.gene060280:CDS
AAATAGGAGGTCTGCTGCCA+AGG 0.481417 1.2:-79542837 None:intergenic
GAGCACCGAAGACAAGGAAA+TGG 0.489060 1.2:+79543210 MS.gene060280:CDS
AGATTTGCATCACGACGATT+GGG 0.489555 1.2:+79542485 MS.gene060280:CDS
TGAATGCAAAAGATTCAAAT+CGG 0.493157 1.2:+79542614 MS.gene060280:CDS
GATCAATTCAAATGCAGTAC+GGG 0.494773 1.2:+79542647 MS.gene060280:CDS
GAGCAAAAGTTGAAGAAGGA+GGG 0.501177 1.2:+79543075 MS.gene060280:CDS
GAACCACCCCTGCGCAGAGA+AGG 0.507570 1.2:-79542682 None:intergenic
GTTCTTTGGCTACTTGTGAA+GGG 0.512894 1.2:+79542701 MS.gene060280:CDS
TTAGGGAAGCCCCGAAACCT+TGG 0.514470 1.2:+79542757 MS.gene060280:CDS
AGTCCTGTTACAGCTCCGCT+TGG 0.514578 1.2:+79542925 MS.gene060280:CDS
CCTCCTTCTCTGCGCAGGGG+TGG 0.514961 1.2:+79542679 MS.gene060280:CDS
GGAGCAAAAGTTGAAGAAGG+AGG 0.524739 1.2:+79543074 MS.gene060280:CDS
CTATACTCGAATAAACACTT+TGG 0.530280 1.2:+79542354 MS.gene060280:CDS
ACGAGTCGTCAGAGTGCTCT+GGG 0.530280 1.2:+79542730 MS.gene060280:CDS
CAAATCTTCTCAAGCTGTGT+GGG 0.532500 1.2:-79543366 None:intergenic
GGATTCTTATCTGAAGAGGT+TGG 0.536913 1.2:+79543143 MS.gene060280:CDS
AGATCAAATCTTTAGATCCA+AGG 0.537715 1.2:-79542774 None:intergenic
GTCCTGTTACAGCTCCGCTT+GGG 0.542486 1.2:+79542926 MS.gene060280:CDS
TTTGGAGCAAAAGTTGAAGA+AGG 0.544038 1.2:+79543071 MS.gene060280:CDS
CGTGATGATGCAATAGAAAG+AGG 0.544569 1.2:-79542979 None:intergenic
CCACCCCTGCGCAGAGAAGG+AGG 0.545149 1.2:-79542679 None:intergenic
AGATCAATTCAAATGCAGTA+CGG 0.546197 1.2:+79542646 MS.gene060280:CDS
TTTGCAGAACTTCTATGAGG+TGG 0.546643 1.2:-79542577 None:intergenic
CGAGAAACCTGTTTCAGCAA+TGG 0.547921 1.2:+79543015 MS.gene060280:CDS
GGAGAAGAGGTTGAACAGCT+TGG 0.548058 1.2:+79542871 MS.gene060280:CDS
TTCTGTTGAAGATGGAGAAG+AGG 0.551162 1.2:+79542858 MS.gene060280:CDS
CAATGGATTCTTATCTGAAG+AGG 0.558506 1.2:+79543139 MS.gene060280:CDS
GAAGAGGTTGAACAGCTTGG+TGG 0.570051 1.2:+79542874 MS.gene060280:CDS
AAGGTTGGTAATGAGAAAGC+TGG 0.570371 1.2:+79542400 MS.gene060280:CDS
GGAAATGAGCACCGAAGACA+AGG 0.573628 1.2:+79543204 MS.gene060280:CDS
GCAACAGAACTGAATTCCCT+TGG 0.575279 1.2:+79542820 MS.gene060280:CDS
GGAGGGTTTAACTGTGACAG+TGG 0.577899 1.2:+79543092 MS.gene060280:CDS
AAATCTATTGAATAATGCAA+TGG 0.585677 1.2:+79543122 MS.gene060280:CDS
CAATCTGGTCCAAGAACTTG+TGG 0.587282 1.2:-79543342 None:intergenic
AATAGGAGGTCTGCTGCCAA+GGG 0.591370 1.2:-79542836 None:intergenic
TCCTCAAAGATGATGTGTCA+GGG 0.591816 1.2:-79543044 None:intergenic
CTAATGAGTTGATTATGAAG+AGG 0.601588 1.2:-79542520 None:intergenic
CAAATATACTGCAACCCAGA+AGG 0.604431 1.2:+79543250 MS.gene060280:CDS
AGAGTGCTCTGGGACAGTTA+GGG 0.609433 1.2:+79542740 MS.gene060280:CDS
TTGCATCACGACGATTGGGA+AGG 0.614716 1.2:+79542489 MS.gene060280:CDS
TTTCCTCCTTCTCTGCGCAG+GGG 0.615514 1.2:+79542676 MS.gene060280:CDS
ACAAATCTTCTCAAGCTGTG+TGG 0.623174 1.2:-79543367 None:intergenic
CCATCTTCAACAGAAATAGG+AGG 0.624160 1.2:-79542850 None:intergenic
TCTTTAGATCCAAGGTTTCG+GGG 0.636693 1.2:-79542766 None:intergenic
CCTGCGCAGAGAAGGAGGAA+AGG 0.640226 1.2:-79542674 None:intergenic
CCCAGATGATAAACCCGTAG+AGG 0.640979 1.2:-79543172 None:intergenic
TTGCTGAAACAGGTTTCTCG+AGG 0.641832 1.2:-79543012 None:intergenic
GATGCAAATCTTGTCAAACT+CGG 0.642289 1.2:-79542473 None:intergenic
ATCAATTCAAATGCAGTACG+GGG 0.669889 1.2:+79542648 MS.gene060280:CDS
GGTTAGTTCAAAGATCAGCA+AGG 0.679940 1.2:+79542450 MS.gene060280:CDS
GAATTCATGGATATCCCAAG+CGG 0.724801 1.2:-79542940 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTATTGAATAATGCAA+TGG + chr1.2:79543122-79543141 MS.gene060280:CDS 20.0%
! TCTTCATAATCAACTCATTA+GGG + chr1.2:79542522-79542541 MS.gene060280:CDS 25.0%
! TGAATGCAAAAGATTCAAAT+CGG + chr1.2:79542614-79542633 MS.gene060280:CDS 25.0%
AAGTTCTGCAAAAAAAGAGA+GGG + chr1.2:79542588-79542607 MS.gene060280:CDS 30.0%
AATCTTTAGATCCAAGGTTT+CGG - chr1.2:79542771-79542790 None:intergenic 30.0%
AGATCAAATCTTTAGATCCA+AGG - chr1.2:79542777-79542796 None:intergenic 30.0%
AGATCAATTCAAATGCAGTA+CGG + chr1.2:79542646-79542665 MS.gene060280:CDS 30.0%
CTATACTCGAATAAACACTT+TGG + chr1.2:79542354-79542373 MS.gene060280:CDS 30.0%
CTCTTCATAATCAACTCATT+AGG + chr1.2:79542521-79542540 MS.gene060280:CDS 30.0%
GAAAGCTGTTATTGTAAAGA+AGG + chr1.2:79542381-79542400 MS.gene060280:CDS 30.0%
GAATTAAATCCACAAGTTCT+TGG + chr1.2:79543333-79543352 MS.gene060280:CDS 30.0%
! ATATCCATGAATTCTGGTTA+TGG + chr1.2:79542949-79542968 MS.gene060280:CDS 30.0%
!! ATTCGAGTATAGTTTTGCTT+TGG - chr1.2:79542346-79542365 None:intergenic 30.0%
!! CTAATGAGTTGATTATGAAG+AGG - chr1.2:79542523-79542542 None:intergenic 30.0%
!!! TTTTTTGCAGAACTTCTATG+AGG - chr1.2:79542583-79542602 None:intergenic 30.0%
ATCAATTCAAATGCAGTACG+GGG + chr1.2:79542648-79542667 MS.gene060280:CDS 35.0%
ATCTTTAGATCCAAGGTTTC+GGG - chr1.2:79542770-79542789 None:intergenic 35.0%
GAAGTTCTGCAAAAAAAGAG+AGG + chr1.2:79542587-79542606 MS.gene060280:CDS 35.0%
GATCAATTCAAATGCAGTAC+GGG + chr1.2:79542647-79542666 MS.gene060280:CDS 35.0%
GATGCAAATCTTGTCAAACT+CGG - chr1.2:79542476-79542495 None:intergenic 35.0%
GCTGTTATTGTAAAGAAGGT+TGG + chr1.2:79542385-79542404 MS.gene060280:CDS 35.0%
TACTTTGAATGCTTGAGCTT+GGG - chr1.2:79542903-79542922 None:intergenic 35.0%
TCTCCATCTTCAACAGAAAT+AGG - chr1.2:79542856-79542875 None:intergenic 35.0%
TTACTTTGAATGCTTGAGCT+TGG - chr1.2:79542904-79542923 None:intergenic 35.0%
! CAATGGATTCTTATCTGAAG+AGG + chr1.2:79543139-79543158 MS.gene060280:CDS 35.0%
! TTATCATCTGGGTTGAGATT+CGG + chr1.2:79543183-79543202 MS.gene060280:CDS 35.0%
! TTTGGAGCAAAAGTTGAAGA+AGG + chr1.2:79543071-79543090 MS.gene060280:CDS 35.0%
AAGATTTGCATCACGACGAT+TGG + chr1.2:79542484-79542503 MS.gene060280:CDS 40.0%
ACAAATCTTCTCAAGCTGTG+TGG - chr1.2:79543370-79543389 None:intergenic 40.0%
ACGTCCATAACCAGAATTCA+TGG - chr1.2:79542956-79542975 None:intergenic 40.0%
ACTGTCCATTTCCTTGTCTT+CGG - chr1.2:79543218-79543237 None:intergenic 40.0%
AGATTTGCATCACGACGATT+GGG + chr1.2:79542485-79542504 MS.gene060280:CDS 40.0%
ATCTTCTTGCACATCTCTCT+TGG + chr1.2:79543293-79543312 MS.gene060280:CDS 40.0%
CAAATATACTGCAACCCAGA+AGG + chr1.2:79543250-79543269 MS.gene060280:CDS 40.0%
CAAATCTTCTCAAGCTGTGT+GGG - chr1.2:79543369-79543388 None:intergenic 40.0%
CCATCTTCAACAGAAATAGG+AGG - chr1.2:79542853-79542872 None:intergenic 40.0%
CTTGGGATATCCATGAATTC+TGG + chr1.2:79542943-79542962 MS.gene060280:CDS 40.0%
GAATTCATGGATATCCCAAG+CGG - chr1.2:79542943-79542962 None:intergenic 40.0%
GAGATATCCATTGCTGAAAC+AGG - chr1.2:79543025-79543044 None:intergenic 40.0%
GAGCAAAAGTTGAAGAAGGA+GGG + chr1.2:79543075-79543094 MS.gene060280:CDS 40.0%
GCTGTTTGCATATACCTTCT+GGG - chr1.2:79543267-79543286 None:intergenic 40.0%
GGATTCTTATCTGAAGAGGT+TGG + chr1.2:79543143-79543162 MS.gene060280:CDS 40.0%
GTACGTACTTTGATCAGCTT+GGG + chr1.2:79542422-79542441 MS.gene060280:CDS 40.0%
GTTCTTTGGCTACTTGTGAA+GGG + chr1.2:79542701-79542720 MS.gene060280:CDS 40.0%
TCCTCAAAGATGATGTGTCA+GGG - chr1.2:79543047-79543066 None:intergenic 40.0%
TCTTTAGATCCAAGGTTTCG+GGG - chr1.2:79542769-79542788 None:intergenic 40.0%
TTCTGTTGAAGATGGAGAAG+AGG + chr1.2:79542858-79542877 MS.gene060280:CDS 40.0%
TTTGCAGAACTTCTATGAGG+TGG - chr1.2:79542580-79542599 None:intergenic 40.0%
! ATCATCTTTGAGGAGTCGTT+TGG + chr1.2:79543053-79543072 MS.gene060280:CDS 40.0%
! CGTGATGATGCAATAGAAAG+AGG - chr1.2:79542982-79543001 None:intergenic 40.0%
! GGTTAGTTCAAAGATCAGCA+AGG + chr1.2:79542450-79542469 MS.gene060280:CDS 40.0%
! TGCTGTTTGCATATACCTTC+TGG - chr1.2:79543268-79543287 None:intergenic 40.0%
!! AAGGTTGGTAATGAGAAAGC+TGG + chr1.2:79542400-79542419 MS.gene060280:CDS 40.0%
!! CCTCCTATTTCTGTTGAAGA+TGG + chr1.2:79542850-79542869 MS.gene060280:CDS 40.0%
CAATCTGGTCCAAGAACTTG+TGG - chr1.2:79543345-79543364 None:intergenic 45.0%
CACAAGTTCTTGGACCAGAT+TGG + chr1.2:79543343-79543362 MS.gene060280:CDS 45.0%
CCTCTACGGGTTTATCATCT+GGG + chr1.2:79543172-79543191 MS.gene060280:CDS 45.0%
CGAGAAACCTGTTTCAGCAA+TGG + chr1.2:79543015-79543034 MS.gene060280:CDS 45.0%
CTCCTCAAAGATGATGTGTC+AGG - chr1.2:79543048-79543067 None:intergenic 45.0%
CTTTGATCAGCTTGGGAAGT+TGG + chr1.2:79542429-79542448 MS.gene060280:CDS 45.0%
GCAACAGAACTGAATTCCCT+TGG + chr1.2:79542820-79542839 MS.gene060280:CDS 45.0%
GGAGCAAAAGTTGAAGAAGG+AGG + chr1.2:79543074-79543093 MS.gene060280:CDS 45.0%
GGTACGTACTTTGATCAGCT+TGG + chr1.2:79542421-79542440 MS.gene060280:CDS 45.0%
GGTTCTTTGGCTACTTGTGA+AGG + chr1.2:79542700-79542719 MS.gene060280:CDS 45.0%
TCCCTGACACATCATCTTTG+AGG + chr1.2:79543043-79543062 MS.gene060280:CDS 45.0%
TCCTCTACGGGTTTATCATC+TGG + chr1.2:79543171-79543190 MS.gene060280:CDS 45.0%
TTGCTGAAACAGGTTTCTCG+AGG - chr1.2:79543015-79543034 None:intergenic 45.0%
! AGGTTGGTTGATTCCTCTAC+GGG + chr1.2:79543159-79543178 MS.gene060280:CDS 45.0%
! CTTGGATTTTCGCGTTGCAA+TGG + chr1.2:79543311-79543330 MS.gene060280:CDS 45.0%
! GAGGTTGGTTGATTCCTCTA+CGG + chr1.2:79543158-79543177 MS.gene060280:CDS 45.0%
AAATAGGAGGTCTGCTGCCA+AGG - chr1.2:79542840-79542859 None:intergenic 50.0%
AATAGGAGGTCTGCTGCCAA+GGG - chr1.2:79542839-79542858 None:intergenic 50.0%
CCCAGATGATAAACCCGTAG+AGG - chr1.2:79543175-79543194 None:intergenic 50.0%
GAAGAGGTTGAACAGCTTGG+TGG + chr1.2:79542874-79542893 MS.gene060280:CDS 50.0%
GGAGAAGAGGTTGAACAGCT+TGG + chr1.2:79542871-79542890 MS.gene060280:CDS 50.0%
GGAGGGTTTAACTGTGACAG+TGG + chr1.2:79543092-79543111 MS.gene060280:CDS 50.0%
TTGCATCACGACGATTGGGA+AGG + chr1.2:79542489-79542508 MS.gene060280:CDS 50.0%
!! AGAGTGCTCTGGGACAGTTA+GGG + chr1.2:79542740-79542759 MS.gene060280:CDS 50.0%
!! GAGCACCGAAGACAAGGAAA+TGG + chr1.2:79543210-79543229 MS.gene060280:CDS 50.0%
!! GGAAATGAGCACCGAAGACA+AGG + chr1.2:79543204-79543223 MS.gene060280:CDS 50.0%
AGTCCTGTTACAGCTCCGCT+TGG + chr1.2:79542925-79542944 MS.gene060280:CDS 55.0%
ATCCCAAGCGGAGCTGTAAC+AGG - chr1.2:79542931-79542950 None:intergenic 55.0%
CTTTCCTCCTTCTCTGCGCA+GGG + chr1.2:79542675-79542694 MS.gene060280:CDS 55.0%
GTCCTGTTACAGCTCCGCTT+GGG + chr1.2:79542926-79542945 MS.gene060280:CDS 55.0%
TCAAGCTGTGTGGGCCAATC+TGG - chr1.2:79543360-79543379 None:intergenic 55.0%
TCTGTTGCACTCTGCTGCTC+TGG - chr1.2:79542808-79542827 None:intergenic 55.0%
TTAGGGAAGCCCCGAAACCT+TGG + chr1.2:79542757-79542776 MS.gene060280:CDS 55.0%
TTTCCTCCTTCTCTGCGCAG+GGG + chr1.2:79542676-79542695 MS.gene060280:CDS 55.0%
! ACGAGTCGTCAGAGTGCTCT+GGG + chr1.2:79542730-79542749 MS.gene060280:CDS 55.0%
! TACGAGTCGTCAGAGTGCTC+TGG + chr1.2:79542729-79542748 MS.gene060280:CDS 55.0%
!! CAGAGTGCTCTGGGACAGTT+AGG + chr1.2:79542739-79542758 MS.gene060280:CDS 55.0%
CCTGCGCAGAGAAGGAGGAA+AGG - chr1.2:79542677-79542696 None:intergenic 60.0%
CCTTTCCTCCTTCTCTGCGC+AGG + chr1.2:79542674-79542693 MS.gene060280:CDS 60.0%
TCTGCGCAGGGGTGGTTCTT+TGG + chr1.2:79542687-79542706 MS.gene060280:CDS 60.0%
GAACCACCCCTGCGCAGAGA+AGG - chr1.2:79542685-79542704 None:intergenic 65.0%
CCACCCCTGCGCAGAGAAGG+AGG - chr1.2:79542682-79542701 None:intergenic 70.0%
CCTCCTTCTCTGCGCAGGGG+TGG + chr1.2:79542679-79542698 MS.gene060280:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 79542334 79543410 79542334 ID=MS.gene060280
chr1.2 mRNA 79542334 79543410 79542334 ID=MS.gene060280.t1;Parent=MS.gene060280
chr1.2 exon 79542334 79543410 79542334 ID=MS.gene060280.t1.exon1;Parent=MS.gene060280.t1
chr1.2 CDS 79542334 79543410 79542334 ID=cds.MS.gene060280.t1;Parent=MS.gene060280.t1
Gene Sequence

>MS.gene060280

ATGACGGTACCAAAGCAAAACTATACTCGAATAAACACTTTGGAGCTGAAAGCTGTTATTGTAAAGAAGGTTGGTAATGAGAAAGCTGGTACGTACTTTGATCAGCTTGGGAAGTTGGTTAGTTCAAAGATCAGCAAGGCCGAGTTTGACAAGATTTGCATCACGACGATTGGGAAGGAAAATGTTCCTCTTCATAATCAACTCATTAGGGCAATTCTGAAGAATGTTTGTTTGTCTAAAGTTCCACCTCATAGAAGTTCTGCAAAAAAAGAGAGGGTCTTGAATGCAAAAGATTCAAATCGGCAGCAGAGCAGATCAATTCAAATGCAGTACGGGGATGCCTTTCCTCCTTCTCTGCGCAGGGGTGGTTCTTTGGCTACTTGTGAAGGGATGCTTACGAGTCGTCAGAGTGCTCTGGGACAGTTAGGGAAGCCCCGAAACCTTGGATCTAAAGATTTGATCTACAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGCAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGCTTGGTGGAAGCCCAAGCTCAAGCATTCAAAGTAAGAGTCCTGTTACAGCTCCGCTTGGGATATCCATGAATTCTGGTTATGGACGTAGTCCTCTTTCTATTGCATCATCACGCAGAAAGTATCCTCGAGAAACCTGTTTCAGCAATGGATATCTCCCTGACACATCATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGAAGAAGGAGGGTTTAACTGTGACAGTGGATTGTGTAAATCTATTGAATAATGCAATGGATTCTTATCTGAAGAGGTTGGTTGATTCCTCTACGGGTTTATCATCTGGGTTGAGATTCGGAAATGAGCACCGAAGACAAGGAAATGGACAGTCAATAGCTGATTCAAATATACTGCAACCCAGAAGGTATATGCAAACAGCAACACAATCTTCTTGCACATCTCTCTTGGATTTTCGCGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTAATGAATGA
Protein sequence

>MS.gene060280.t1

MTVPKQNYTRINTLELKAVIVKKVGNEKAGTYFDQLGKLVSSKISKAEFDKICITTIGKENVPLHNQLIRAILKNVCLSKVPPHRSSAKKERVLNAKDSNRQQSRSIQMQYGDAFPPSLRRGGSLATCEGMLTSRQSALGQLGKPRNLGSKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQLGGSPSSSIQSKSPVTAPLGISMNSGYGRSPLSIASSRRKYPRETCFSNGYLPDTSSLRSRLEQKLKKEGLTVTVDCVNLLNNAMDSYLKRLVDSSTGLSSGLRFGNEHRRQGNGQSIADSNILQPRRYMQTATQSSCTSLLDFRVAMELNPQVLGPDWPTQLEKICIRASNE