AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71629

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71629.t1 MTR_1g106765 96.927 358 11 0 1 358 1 358 0.0 712
MS.gene71629.t1 MTR_1g009690 33.179 431 196 18 6 358 4 420 1.70e-47 166
MS.gene71629.t1 MTR_1g009710 33.333 432 188 18 6 355 4 417 1.19e-45 161
MS.gene71629.t1 MTR_4g095490 39.024 205 112 5 156 358 262 455 1.43e-29 118
MS.gene71629.t1 MTR_4g095490 41.489 94 52 2 8 100 7 98 2.48e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71629.t1 AT4G33890 42.659 361 176 9 6 358 5 342 3.76e-85 261
MS.gene71629.t1 AT4G33890 42.659 361 176 9 6 358 5 342 3.76e-85 261
MS.gene71629.t1 AT2G14850 41.525 354 139 8 6 358 5 291 3.13e-80 247
MS.gene71629.t1 AT4G31440 35.052 388 183 16 10 353 8 370 6.03e-48 166
MS.gene71629.t1 AT5G67410 32.033 359 165 10 1 354 1 285 7.70e-42 148
MS.gene71629.t1 AT5G67410 32.033 359 165 10 1 354 1 285 7.70e-42 148
MS.gene71629.t1 AT2G24530 30.958 407 211 12 10 358 8 402 2.12e-41 150
MS.gene71629.t1 AT2G24530 30.958 407 211 12 10 358 8 402 2.12e-41 150

Find 92 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTAGATCCAAGGTTTC+GGG 0.184229 1.4:-82376512 None:intergenic
TCCTCTACGGGTTTATCATC+TGG 0.234652 1.4:+82376916 MS.gene71629:CDS
TGCTGTTTGCATATACCTTC+TGG 0.237048 1.4:-82377010 None:intergenic
TCTGCGCAGGGGTGGTTCTT+TGG 0.280256 1.4:+82376432 MS.gene71629:CDS
TCTCCATCTTCAACAGAAAT+AGG 0.282741 1.4:-82376598 None:intergenic
GAATTAAATCCACAAGTTCT+TGG 0.301140 1.4:+82377078 MS.gene71629:CDS
CTTGGGATATCCATGAATTC+TGG 0.305776 1.4:+82376688 MS.gene71629:CDS
TCAAGCTGTGTGGGCCAATC+TGG 0.313228 1.4:-82377102 None:intergenic
TCTTCATAATCAACTCATTA+GGG 0.313745 1.4:+82376267 MS.gene71629:CDS
CAGAGTGCTCTGGGACAGTT+AGG 0.335078 1.4:+82376484 MS.gene71629:CDS
TACTTTGAATGCTTGAGCTT+GGG 0.342324 1.4:-82376645 None:intergenic
CTCTTCATAATCAACTCATT+AGG 0.354368 1.4:+82376266 MS.gene71629:CDS
GCTGTTTGCATATACCTTCT+GGG 0.354407 1.4:-82377009 None:intergenic
AATCTTTAGATCCAAGGTTT+CGG 0.356774 1.4:-82376513 None:intergenic
TCTGTTGCACTCTGCTGCTC+TGG 0.359317 1.4:-82376550 None:intergenic
ATCTTCTTGCACATCTCTCT+TGG 0.363603 1.4:+82377038 MS.gene71629:CDS
ACTGTCCATTTCCTTGTCTT+CGG 0.375162 1.4:-82376960 None:intergenic
TACGAGTCGTCAGAGTGCTC+TGG 0.388281 1.4:+82376474 MS.gene71629:CDS
ATCATCTTTGAGGAGTCGTT+TGG 0.388549 1.4:+82376798 MS.gene71629:CDS
CCTTTCCTCCTTCTCTGCGC+AGG 0.410218 1.4:+82376419 MS.gene71629:CDS
ATCCCAAGTGGAGCTGTAAC+AGG 0.410686 1.4:-82376673 None:intergenic
CTTTGATCAGCTTGGGAAGT+TGG 0.420393 1.4:+82376174 MS.gene71629:CDS
CCTCTACGGGTTTATCATCT+GGG 0.422513 1.4:+82376917 MS.gene71629:CDS
TTACTTTGAATGCTTGAGCT+TGG 0.422875 1.4:-82376646 None:intergenic
TTATCATCTGGGTTGAGATT+CGG 0.424388 1.4:+82376928 MS.gene71629:CDS
CCTCCTATTTCTGTTGAAGA+TGG 0.424695 1.4:+82376595 MS.gene71629:CDS
GAGATATCCATTGCTGAAAC+AGG 0.424894 1.4:-82376767 None:intergenic
ACGTCCATAACCAGAATTCA+TGG 0.425839 1.4:-82376698 None:intergenic
CTTTCCTCCTTCTCTGCGCA+GGG 0.427862 1.4:+82376420 MS.gene71629:CDS
GGTTCTTTGGCTACTTGTGA+AGG 0.430531 1.4:+82376445 MS.gene71629:CDS
ATATCCATGAATTCTGGTTA+TGG 0.434201 1.4:+82376694 MS.gene71629:CDS
GAAAGCTGTTATTGTAAAGA+AGG 0.435298 1.4:+82376126 MS.gene71629:CDS
AAGATTTGCATCACGACGAT+TGG 0.436849 1.4:+82376229 MS.gene71629:CDS
CACAAGTTCTTGGACCAGAT+TGG 0.441697 1.4:+82377088 MS.gene71629:CDS
CTCCTCAAAGATGATGTGTC+AGG 0.443797 1.4:-82376790 None:intergenic
GCTGTTATTGTAAAGAAGGT+TGG 0.449917 1.4:+82376130 MS.gene71629:CDS
TCCCTGACACATCATCTTTG+AGG 0.457686 1.4:+82376788 MS.gene71629:CDS
GTACGTACTTTGATCAGCTT+GGG 0.458271 1.4:+82376167 MS.gene71629:CDS
AGGTTGGTTGATTCCTCTAC+GGG 0.470003 1.4:+82376904 MS.gene71629:CDS
GAGGTTGGTTGATTCCTCTA+CGG 0.470061 1.4:+82376903 MS.gene71629:CDS
GGTACGTACTTTGATCAGCT+TGG 0.478644 1.4:+82376166 MS.gene71629:CDS
AAATAGGAGGTCTGCTGCCA+AGG 0.481417 1.4:-82376582 None:intergenic
GAGCACCGAAGACAAGGAAA+TGG 0.489060 1.4:+82376955 MS.gene71629:CDS
AGATTTGCATCACGACGATT+GGG 0.489555 1.4:+82376230 MS.gene71629:CDS
TGAATGCAAAAGATTCAAAT+CGG 0.493157 1.4:+82376359 MS.gene71629:CDS
GATCAATTCAAATGCAGTAC+GGG 0.494773 1.4:+82376392 MS.gene71629:CDS
GAGCAAAAGTTGAAGAAGGA+GGG 0.501177 1.4:+82376820 MS.gene71629:CDS
GAACCACCCCTGCGCAGAGA+AGG 0.507570 1.4:-82376427 None:intergenic
GTTCTTTGGCTACTTGTGAA+GGG 0.512894 1.4:+82376446 MS.gene71629:CDS
TTAGGGAAGCCCCGAAACCT+TGG 0.514470 1.4:+82376502 MS.gene71629:CDS
CCTCCTTCTCTGCGCAGGGG+TGG 0.514961 1.4:+82376424 MS.gene71629:CDS
AGTCCTGTTACAGCTCCACT+TGG 0.515705 1.4:+82376670 MS.gene71629:CDS
GGAGCAAAAGTTGAAGAAGG+AGG 0.524739 1.4:+82376819 MS.gene71629:CDS
CTATACTCGAATAAACACTT+TGG 0.530280 1.4:+82376099 MS.gene71629:CDS
ACGAGTCGTCAGAGTGCTCT+GGG 0.530280 1.4:+82376475 MS.gene71629:CDS
CAAATCTTCTCAAGCTGTGT+GGG 0.532500 1.4:-82377111 None:intergenic
GGATTCTTATCTGAAGAGGT+TGG 0.536913 1.4:+82376888 MS.gene71629:CDS
AGATCAAATCTTTAGATCCA+AGG 0.537715 1.4:-82376519 None:intergenic
TTTGGAGCAAAAGTTGAAGA+AGG 0.544038 1.4:+82376816 MS.gene71629:CDS
CGTGATGATGCAATAGAAAG+AGG 0.544569 1.4:-82376724 None:intergenic
CCACCCCTGCGCAGAGAAGG+AGG 0.545149 1.4:-82376424 None:intergenic
AGATCAATTCAAATGCAGTA+CGG 0.546197 1.4:+82376391 MS.gene71629:CDS
TTTGCAGAACTTCTATGAGG+TGG 0.546643 1.4:-82376322 None:intergenic
CGAGAAACCTGTTTCAGCAA+TGG 0.547921 1.4:+82376760 MS.gene71629:CDS
GGAGAAGAGGTTGAACAGCT+TGG 0.548058 1.4:+82376616 MS.gene71629:CDS
TTCTGTTGAAGATGGAGAAG+AGG 0.551162 1.4:+82376603 MS.gene71629:CDS
CAATGGATTCTTATCTGAAG+AGG 0.558506 1.4:+82376884 MS.gene71629:CDS
GAAGAGGTTGAACAGCTTGG+TGG 0.570051 1.4:+82376619 MS.gene71629:CDS
AAGGTTGGTAATGAGAAAGC+TGG 0.570371 1.4:+82376145 MS.gene71629:CDS
GGAAATGAGCACCGAAGACA+AGG 0.573628 1.4:+82376949 MS.gene71629:CDS
GCAACAGAACTGAATTCCCT+TGG 0.575279 1.4:+82376565 MS.gene71629:CDS
GGAGGGTTTAACTGTGACAG+TGG 0.577899 1.4:+82376837 MS.gene71629:CDS
AAATCTATTGAATAATGCAA+TGG 0.585677 1.4:+82376867 MS.gene71629:CDS
CAATCTGGTCCAAGAACTTG+TGG 0.587282 1.4:-82377087 None:intergenic
AATAGGAGGTCTGCTGCCAA+GGG 0.591370 1.4:-82376581 None:intergenic
TCCTCAAAGATGATGTGTCA+GGG 0.591816 1.4:-82376789 None:intergenic
CTAATGAGTTGATTATGAAG+AGG 0.601588 1.4:-82376265 None:intergenic
CAAATATACTGCAACCCAGA+AGG 0.604431 1.4:+82376995 MS.gene71629:CDS
AGAGTGCTCTGGGACAGTTA+GGG 0.609433 1.4:+82376485 MS.gene71629:CDS
TTGCATCACGACGATTGGGA+AGG 0.614716 1.4:+82376234 MS.gene71629:CDS
TTTCCTCCTTCTCTGCGCAG+GGG 0.615514 1.4:+82376421 MS.gene71629:CDS
ACAAATCTTCTCAAGCTGTG+TGG 0.623174 1.4:-82377112 None:intergenic
CCATCTTCAACAGAAATAGG+AGG 0.624160 1.4:-82376595 None:intergenic
GTCCTGTTACAGCTCCACTT+GGG 0.628305 1.4:+82376671 MS.gene71629:CDS
TCTTTAGATCCAAGGTTTCG+GGG 0.636693 1.4:-82376511 None:intergenic
CCTGCGCAGAGAAGGAGGAA+AGG 0.640226 1.4:-82376419 None:intergenic
CCCAGATGATAAACCCGTAG+AGG 0.640979 1.4:-82376917 None:intergenic
TTGCTGAAACAGGTTTCTCG+AGG 0.641832 1.4:-82376757 None:intergenic
GATGCAAATCTTGTCAAACT+CGG 0.642289 1.4:-82376218 None:intergenic
ATCAATTCAAATGCAGTACG+GGG 0.669889 1.4:+82376393 MS.gene71629:CDS
GGTTAGTTCAAAGATCAGCA+AGG 0.679940 1.4:+82376195 MS.gene71629:CDS
GAATTCATGGATATCCCAAG+TGG 0.683916 1.4:-82376685 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTATTGAATAATGCAA+TGG + chr1.4:82376867-82376886 MS.gene71629:CDS 20.0%
! AAGTTCTGCAAAAAAAAAGA+GGG + chr1.4:82376333-82376352 MS.gene71629:CDS 25.0%
! TCTTCATAATCAACTCATTA+GGG + chr1.4:82376267-82376286 MS.gene71629:CDS 25.0%
! TGAATGCAAAAGATTCAAAT+CGG + chr1.4:82376359-82376378 MS.gene71629:CDS 25.0%
AATCTTTAGATCCAAGGTTT+CGG - chr1.4:82376516-82376535 None:intergenic 30.0%
AGATCAAATCTTTAGATCCA+AGG - chr1.4:82376522-82376541 None:intergenic 30.0%
AGATCAATTCAAATGCAGTA+CGG + chr1.4:82376391-82376410 MS.gene71629:CDS 30.0%
CTATACTCGAATAAACACTT+TGG + chr1.4:82376099-82376118 MS.gene71629:CDS 30.0%
CTCTTCATAATCAACTCATT+AGG + chr1.4:82376266-82376285 MS.gene71629:CDS 30.0%
GAAAGCTGTTATTGTAAAGA+AGG + chr1.4:82376126-82376145 MS.gene71629:CDS 30.0%
GAAGTTCTGCAAAAAAAAAG+AGG + chr1.4:82376332-82376351 MS.gene71629:CDS 30.0%
GAATTAAATCCACAAGTTCT+TGG + chr1.4:82377078-82377097 MS.gene71629:CDS 30.0%
! ATATCCATGAATTCTGGTTA+TGG + chr1.4:82376694-82376713 MS.gene71629:CDS 30.0%
!! ATTCGAGTATAGTTTTGCTT+TGG - chr1.4:82376091-82376110 None:intergenic 30.0%
!! CTAATGAGTTGATTATGAAG+AGG - chr1.4:82376268-82376287 None:intergenic 30.0%
!!! TTTTTTGCAGAACTTCTATG+AGG - chr1.4:82376328-82376347 None:intergenic 30.0%
ATCAATTCAAATGCAGTACG+GGG + chr1.4:82376393-82376412 MS.gene71629:CDS 35.0%
ATCTTTAGATCCAAGGTTTC+GGG - chr1.4:82376515-82376534 None:intergenic 35.0%
GATCAATTCAAATGCAGTAC+GGG + chr1.4:82376392-82376411 MS.gene71629:CDS 35.0%
GATGCAAATCTTGTCAAACT+CGG - chr1.4:82376221-82376240 None:intergenic 35.0%
GCTGTTATTGTAAAGAAGGT+TGG + chr1.4:82376130-82376149 MS.gene71629:CDS 35.0%
TACTTTGAATGCTTGAGCTT+GGG - chr1.4:82376648-82376667 None:intergenic 35.0%
TCTCCATCTTCAACAGAAAT+AGG - chr1.4:82376601-82376620 None:intergenic 35.0%
TTACTTTGAATGCTTGAGCT+TGG - chr1.4:82376649-82376668 None:intergenic 35.0%
! CAATGGATTCTTATCTGAAG+AGG + chr1.4:82376884-82376903 MS.gene71629:CDS 35.0%
! TTATCATCTGGGTTGAGATT+CGG + chr1.4:82376928-82376947 MS.gene71629:CDS 35.0%
! TTTGGAGCAAAAGTTGAAGA+AGG + chr1.4:82376816-82376835 MS.gene71629:CDS 35.0%
AAGATTTGCATCACGACGAT+TGG + chr1.4:82376229-82376248 MS.gene71629:CDS 40.0%
ACAAATCTTCTCAAGCTGTG+TGG - chr1.4:82377115-82377134 None:intergenic 40.0%
ACGTCCATAACCAGAATTCA+TGG - chr1.4:82376701-82376720 None:intergenic 40.0%
ACTGTCCATTTCCTTGTCTT+CGG - chr1.4:82376963-82376982 None:intergenic 40.0%
AGATTTGCATCACGACGATT+GGG + chr1.4:82376230-82376249 MS.gene71629:CDS 40.0%
ATCTTCTTGCACATCTCTCT+TGG + chr1.4:82377038-82377057 MS.gene71629:CDS 40.0%
CAAATATACTGCAACCCAGA+AGG + chr1.4:82376995-82377014 MS.gene71629:CDS 40.0%
CAAATCTTCTCAAGCTGTGT+GGG - chr1.4:82377114-82377133 None:intergenic 40.0%
CCATCTTCAACAGAAATAGG+AGG - chr1.4:82376598-82376617 None:intergenic 40.0%
CTTGGGATATCCATGAATTC+TGG + chr1.4:82376688-82376707 MS.gene71629:CDS 40.0%
GAATTCATGGATATCCCAAG+TGG - chr1.4:82376688-82376707 None:intergenic 40.0%
GAGATATCCATTGCTGAAAC+AGG - chr1.4:82376770-82376789 None:intergenic 40.0%
GAGCAAAAGTTGAAGAAGGA+GGG + chr1.4:82376820-82376839 MS.gene71629:CDS 40.0%
GCTGTTTGCATATACCTTCT+GGG - chr1.4:82377012-82377031 None:intergenic 40.0%
GGATTCTTATCTGAAGAGGT+TGG + chr1.4:82376888-82376907 MS.gene71629:CDS 40.0%
GTACGTACTTTGATCAGCTT+GGG + chr1.4:82376167-82376186 MS.gene71629:CDS 40.0%
GTTCTTTGGCTACTTGTGAA+GGG + chr1.4:82376446-82376465 MS.gene71629:CDS 40.0%
TCCTCAAAGATGATGTGTCA+GGG - chr1.4:82376792-82376811 None:intergenic 40.0%
TCTTTAGATCCAAGGTTTCG+GGG - chr1.4:82376514-82376533 None:intergenic 40.0%
TTCTGTTGAAGATGGAGAAG+AGG + chr1.4:82376603-82376622 MS.gene71629:CDS 40.0%
TTTGCAGAACTTCTATGAGG+TGG - chr1.4:82376325-82376344 None:intergenic 40.0%
! ATCATCTTTGAGGAGTCGTT+TGG + chr1.4:82376798-82376817 MS.gene71629:CDS 40.0%
! CGTGATGATGCAATAGAAAG+AGG - chr1.4:82376727-82376746 None:intergenic 40.0%
! GGTTAGTTCAAAGATCAGCA+AGG + chr1.4:82376195-82376214 MS.gene71629:CDS 40.0%
! TGCTGTTTGCATATACCTTC+TGG - chr1.4:82377013-82377032 None:intergenic 40.0%
!! AAGGTTGGTAATGAGAAAGC+TGG + chr1.4:82376145-82376164 MS.gene71629:CDS 40.0%
!! CCTCCTATTTCTGTTGAAGA+TGG + chr1.4:82376595-82376614 MS.gene71629:CDS 40.0%
CAATCTGGTCCAAGAACTTG+TGG - chr1.4:82377090-82377109 None:intergenic 45.0%
CACAAGTTCTTGGACCAGAT+TGG + chr1.4:82377088-82377107 MS.gene71629:CDS 45.0%
CCTCTACGGGTTTATCATCT+GGG + chr1.4:82376917-82376936 MS.gene71629:CDS 45.0%
CGAGAAACCTGTTTCAGCAA+TGG + chr1.4:82376760-82376779 MS.gene71629:CDS 45.0%
CTCCTCAAAGATGATGTGTC+AGG - chr1.4:82376793-82376812 None:intergenic 45.0%
CTTTGATCAGCTTGGGAAGT+TGG + chr1.4:82376174-82376193 MS.gene71629:CDS 45.0%
GCAACAGAACTGAATTCCCT+TGG + chr1.4:82376565-82376584 MS.gene71629:CDS 45.0%
GGAGCAAAAGTTGAAGAAGG+AGG + chr1.4:82376819-82376838 MS.gene71629:CDS 45.0%
GGTACGTACTTTGATCAGCT+TGG + chr1.4:82376166-82376185 MS.gene71629:CDS 45.0%
GGTTCTTTGGCTACTTGTGA+AGG + chr1.4:82376445-82376464 MS.gene71629:CDS 45.0%
TCCCTGACACATCATCTTTG+AGG + chr1.4:82376788-82376807 MS.gene71629:CDS 45.0%
TCCTCTACGGGTTTATCATC+TGG + chr1.4:82376916-82376935 MS.gene71629:CDS 45.0%
TTGCTGAAACAGGTTTCTCG+AGG - chr1.4:82376760-82376779 None:intergenic 45.0%
! AGGTTGGTTGATTCCTCTAC+GGG + chr1.4:82376904-82376923 MS.gene71629:CDS 45.0%
! CTTGGATTTTCGCGTTGCAA+TGG + chr1.4:82377056-82377075 MS.gene71629:CDS 45.0%
! GAGGTTGGTTGATTCCTCTA+CGG + chr1.4:82376903-82376922 MS.gene71629:CDS 45.0%
AAATAGGAGGTCTGCTGCCA+AGG - chr1.4:82376585-82376604 None:intergenic 50.0%
AATAGGAGGTCTGCTGCCAA+GGG - chr1.4:82376584-82376603 None:intergenic 50.0%
AGTCCTGTTACAGCTCCACT+TGG + chr1.4:82376670-82376689 MS.gene71629:CDS 50.0%
ATCCCAAGTGGAGCTGTAAC+AGG - chr1.4:82376676-82376695 None:intergenic 50.0%
CCCAGATGATAAACCCGTAG+AGG - chr1.4:82376920-82376939 None:intergenic 50.0%
GAAGAGGTTGAACAGCTTGG+TGG + chr1.4:82376619-82376638 MS.gene71629:CDS 50.0%
GGAGAAGAGGTTGAACAGCT+TGG + chr1.4:82376616-82376635 MS.gene71629:CDS 50.0%
GGAGGGTTTAACTGTGACAG+TGG + chr1.4:82376837-82376856 MS.gene71629:CDS 50.0%
GTCCTGTTACAGCTCCACTT+GGG + chr1.4:82376671-82376690 MS.gene71629:CDS 50.0%
TTGCATCACGACGATTGGGA+AGG + chr1.4:82376234-82376253 MS.gene71629:CDS 50.0%
!! AGAGTGCTCTGGGACAGTTA+GGG + chr1.4:82376485-82376504 MS.gene71629:CDS 50.0%
!! GAGCACCGAAGACAAGGAAA+TGG + chr1.4:82376955-82376974 MS.gene71629:CDS 50.0%
!! GGAAATGAGCACCGAAGACA+AGG + chr1.4:82376949-82376968 MS.gene71629:CDS 50.0%
CTTTCCTCCTTCTCTGCGCA+GGG + chr1.4:82376420-82376439 MS.gene71629:CDS 55.0%
TCAAGCTGTGTGGGCCAATC+TGG - chr1.4:82377105-82377124 None:intergenic 55.0%
TCTGTTGCACTCTGCTGCTC+TGG - chr1.4:82376553-82376572 None:intergenic 55.0%
TTAGGGAAGCCCCGAAACCT+TGG + chr1.4:82376502-82376521 MS.gene71629:CDS 55.0%
TTTCCTCCTTCTCTGCGCAG+GGG + chr1.4:82376421-82376440 MS.gene71629:CDS 55.0%
! ACGAGTCGTCAGAGTGCTCT+GGG + chr1.4:82376475-82376494 MS.gene71629:CDS 55.0%
! TACGAGTCGTCAGAGTGCTC+TGG + chr1.4:82376474-82376493 MS.gene71629:CDS 55.0%
!! CAGAGTGCTCTGGGACAGTT+AGG + chr1.4:82376484-82376503 MS.gene71629:CDS 55.0%
CCTGCGCAGAGAAGGAGGAA+AGG - chr1.4:82376422-82376441 None:intergenic 60.0%
CCTTTCCTCCTTCTCTGCGC+AGG + chr1.4:82376419-82376438 MS.gene71629:CDS 60.0%
TCTGCGCAGGGGTGGTTCTT+TGG + chr1.4:82376432-82376451 MS.gene71629:CDS 60.0%
GAACCACCCCTGCGCAGAGA+AGG - chr1.4:82376430-82376449 None:intergenic 65.0%
CCACCCCTGCGCAGAGAAGG+AGG - chr1.4:82376427-82376446 None:intergenic 70.0%
CCTCCTTCTCTGCGCAGGGG+TGG + chr1.4:82376424-82376443 MS.gene71629:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 82376079 82377155 82376079 ID=MS.gene71629
chr1.4 mRNA 82376079 82377155 82376079 ID=MS.gene71629.t1;Parent=MS.gene71629
chr1.4 exon 82376079 82377155 82376079 ID=MS.gene71629.t1.exon1;Parent=MS.gene71629.t1
chr1.4 CDS 82376079 82377155 82376079 ID=cds.MS.gene71629.t1;Parent=MS.gene71629.t1
Gene Sequence

>MS.gene71629

ATGACGGTACCAAAGCAAAACTATACTCGAATAAACACTTTGGAGCTGAAAGCTGTTATTGTAAAGAAGGTTGGTAATGAGAAAGCTGGTACGTACTTTGATCAGCTTGGGAAGTTGGTTAGTTCAAAGATCAGCAAGGCCGAGTTTGACAAGATTTGCATCACGACGATTGGGAAGGAAAATGTTCCTCTTCATAATCAACTCATTAGGGCAATTCTGAAGAATGTTTGTTTGTCTAAAGTTCCACCTCATAGAAGTTCTGCAAAAAAAAAGAGGGTCTTGAATGCAAAAGATTCAAATCGGCAGCAGAGCAGATCAATTCAAATGCAGTACGGGGATGCCTTTCCTCCTTCTCTGCGCAGGGGTGGTTCTTTGGCTACTTGTGAAGGGATGCTTACGAGTCGTCAGAGTGCTCTGGGACAGTTAGGGAAGCCCCGAAACCTTGGATCTAAAGATTTGATCTACAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGCAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGCTTGGTGGAAGCCCAAGCTCAAGCATTCAAAGTAAGAGTCCTGTTACAGCTCCACTTGGGATATCCATGAATTCTGGTTATGGACGTAGTCCTCTTTCTATTGCATCATCACGCAGAAAGTATCCTCGAGAAACCTGTTTCAGCAATGGATATCTCCCTGACACATCATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGAAGAAGGAGGGTTTAACTGTGACAGTGGATTGTGTAAATCTATTGAATAATGCAATGGATTCTTATCTGAAGAGGTTGGTTGATTCCTCTACGGGTTTATCATCTGGGTTGAGATTCGGAAATGAGCACCGAAGACAAGGAAATGGACAGTCAATAGCTGATTCAAATATACTGCAACCCAGAAGGTATATGCAAACAGCAACACAATCTTCTTGCACATCTCTCTTGGATTTTCGCGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTAATGAATGA
Protein sequence

>MS.gene71629.t1

MTVPKQNYTRINTLELKAVIVKKVGNEKAGTYFDQLGKLVSSKISKAEFDKICITTIGKENVPLHNQLIRAILKNVCLSKVPPHRSSAKKKRVLNAKDSNRQQSRSIQMQYGDAFPPSLRRGGSLATCEGMLTSRQSALGQLGKPRNLGSKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQLGGSPSSSIQSKSPVTAPLGISMNSGYGRSPLSIASSRRKYPRETCFSNGYLPDTSSLRSRLEQKLKKEGLTVTVDCVNLLNNAMDSYLKRLVDSSTGLSSGLRFGNEHRRQGNGQSIADSNILQPRRYMQTATQSSCTSLLDFRVAMELNPQVLGPDWPTQLEKICIRASNE