AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76818

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76818.t1 MTR_1g106765 97.486 358 9 0 1 358 1 358 0.0 717
MS.gene76818.t1 MTR_1g009690 33.645 428 198 18 6 358 4 420 1.55e-46 164
MS.gene76818.t1 MTR_1g009710 33.724 427 193 18 6 355 4 417 9.07e-45 159
MS.gene76818.t1 MTR_4g095490 38.049 205 114 5 156 358 262 455 1.01e-27 113
MS.gene76818.t1 MTR_4g095490 41.489 94 52 2 8 100 7 98 2.55e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76818.t1 AT4G33890 43.767 361 172 10 6 358 5 342 2.99e-85 262
MS.gene76818.t1 AT4G33890 43.767 361 172 10 6 358 5 342 2.99e-85 262
MS.gene76818.t1 AT2G14850 41.808 354 138 8 6 358 5 291 3.13e-80 247
MS.gene76818.t1 AT4G31440 34.109 387 188 15 10 353 8 370 7.93e-46 160
MS.gene76818.t1 AT5G67410 32.033 359 165 10 1 354 1 285 4.45e-42 148
MS.gene76818.t1 AT5G67410 32.033 359 165 10 1 354 1 285 4.45e-42 148
MS.gene76818.t1 AT2G24530 32.258 403 211 15 10 358 8 402 4.71e-39 143
MS.gene76818.t1 AT2G24530 32.258 403 211 15 10 358 8 402 4.71e-39 143

Find 98 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTAGATCCAAGGTTTC+GGG 0.184229 1.1:-76563853 None:intergenic
CCTGCGCAGGGGTGGTTCTT+TGG 0.220322 1.1:+76563773 MS.gene76818:CDS
TGCTGTTTGCATATACATTC+TGG 0.230602 1.1:-76564351 None:intergenic
TCTCCATCTTCAACAGAAAT+AGG 0.282741 1.1:-76563939 None:intergenic
GAATTAAATCCACAAGTTCT+TGG 0.301140 1.1:+76564419 MS.gene76818:CDS
TCAAGCTGTGTGGGCCAATC+TGG 0.313228 1.1:-76564443 None:intergenic
TCTTCATAATCAACTCATTA+GGG 0.313745 1.1:+76563608 MS.gene76818:CDS
CGGAGTGCTTTGGGACAGTT+AGG 0.314718 1.1:+76563825 MS.gene76818:CDS
TACTTTGAATGCTTGAGCTT+GGG 0.342324 1.1:-76563986 None:intergenic
TACGGGTCGTCGGAGTGCTT+TGG 0.346552 1.1:+76563815 MS.gene76818:CDS
ATCTTCTTGCGCATCTCTCT+TGG 0.347790 1.1:+76564379 MS.gene76818:CDS
ACGGGTCGTCGGAGTGCTTT+GGG 0.349062 1.1:+76563816 MS.gene76818:CDS
TCCTCTACGGGTTTATCATC+TGG 0.353714 1.1:+76564257 MS.gene76818:CDS
CTCTTCATAATCAACTCATT+AGG 0.354368 1.1:+76563607 MS.gene76818:CDS
AATCTTTAGATCCAAGGTTT+CGG 0.356774 1.1:-76563854 None:intergenic
TCTGTTGCACTCTGCTGCTC+TGG 0.359317 1.1:-76563891 None:intergenic
CCTTTCCTCCTTCCCTGCGC+AGG 0.360688 1.1:+76563760 MS.gene76818:CDS
AGTCCTGTTGCAGCCCCTCT+TGG 0.364308 1.1:+76564011 MS.gene76818:CDS
ACTGTCCATTTCCTTGTCTT+CGG 0.375162 1.1:-76564301 None:intergenic
TTATCATCTGGTTTAAGATT+CGG 0.388055 1.1:+76564269 MS.gene76818:CDS
ATCATCTTTGAGGAGTCGTT+TGG 0.388549 1.1:+76564139 MS.gene76818:CDS
CTTTCCTCCTTCCCTGCGCA+GGG 0.395040 1.1:+76563761 MS.gene76818:CDS
ATCCCAAGAGGGGCTGCAAC+AGG 0.401354 1.1:-76564014 None:intergenic
GCTGTTTGCATATACATTCT+GGG 0.415038 1.1:-76564350 None:intergenic
CTTTGATCAGCTTGGGAAGT+TGG 0.420393 1.1:+76563515 MS.gene76818:CDS
TTACTTTGAATGCTTGAGCT+TGG 0.422875 1.1:-76563987 None:intergenic
CCTCCTATTTCTGTTGAAGA+TGG 0.424695 1.1:+76563936 MS.gene76818:CDS
ACTTGTGAAGGGATGCTTAC+GGG 0.424873 1.1:+76563798 MS.gene76818:CDS
GAGATATCCATTGCTGAAAC+AGG 0.424894 1.1:-76564108 None:intergenic
ACGTCCATAACCAGAGTTCA+TGG 0.428298 1.1:-76564039 None:intergenic
ATATCCATGAACTCTGGTTA+TGG 0.429292 1.1:+76564035 MS.gene76818:CDS
GGTTCTTTGGCTACTTGTGA+AGG 0.430531 1.1:+76563786 MS.gene76818:CDS
GTCCTGTTGCAGCCCCTCTT+GGG 0.433856 1.1:+76564012 MS.gene76818:CDS
GAAAGCTGTTATTGTAAAGA+AGG 0.435298 1.1:+76563467 MS.gene76818:CDS
AAGATTTGCATCACGACGAT+TGG 0.436849 1.1:+76563570 MS.gene76818:CDS
CACAAGTTCTTGGACCAGAT+TGG 0.441697 1.1:+76564429 MS.gene76818:CDS
CTCCTCAAAGATGATGTGTC+AGG 0.443797 1.1:-76564131 None:intergenic
GCTGTTATTGTAAAGAAGGT+TGG 0.449917 1.1:+76563471 MS.gene76818:CDS
CCAAAGAACCACCCCTGCGC+AGG 0.452604 1.1:-76563773 None:intergenic
CCTCCTTCCCTGCGCAGGGG+TGG 0.457550 1.1:+76563765 MS.gene76818:CDS
TCCCTGACACATCATCTTTG+AGG 0.457686 1.1:+76564129 MS.gene76818:CDS
GTACGTACTTTGATCAGCTT+GGG 0.458271 1.1:+76563508 MS.gene76818:CDS
GGTACGTACTTTGATCAGCT+TGG 0.478644 1.1:+76563507 MS.gene76818:CDS
AAATAGGAGGTCTGCTGCCA+AGG 0.481417 1.1:-76563923 None:intergenic
GAGGTTGGTTGAATCCTCTA+CGG 0.483248 1.1:+76564244 MS.gene76818:CDS
GAACCACCCCTGCGCAGGGA+AGG 0.484271 1.1:-76563768 None:intergenic
GAGCACCGAAGACAAGGAAA+TGG 0.489060 1.1:+76564296 MS.gene76818:CDS
AGATTTGCATCACGACGATT+GGG 0.489555 1.1:+76563571 MS.gene76818:CDS
GATCAATTCAAATGCAGTAC+GGG 0.494773 1.1:+76563733 MS.gene76818:CDS
GAGCAAAAGTTGAAGAAGGA+GGG 0.501177 1.1:+76564161 MS.gene76818:CDS
CCACCCCTGCGCAGGGAAGG+AGG 0.507160 1.1:-76563765 None:intergenic
TGAATGCTAAAGATTCAAAT+CGG 0.512470 1.1:+76563700 MS.gene76818:CDS
GTTCTTTGGCTACTTGTGAA+GGG 0.512894 1.1:+76563787 MS.gene76818:CDS
TTAGGGAAGCCCCGAAACCT+TGG 0.514470 1.1:+76563843 MS.gene76818:CDS
CAAAGAACCACCCCTGCGCA+GGG 0.521532 1.1:-76563772 None:intergenic
TACTTGTGAAGGGATGCTTA+CGG 0.521551 1.1:+76563797 MS.gene76818:CDS
AGATCAAATCTTTAGATCCA+AGG 0.521702 1.1:-76563860 None:intergenic
GGAGCAAAAGTTGAAGAAGG+AGG 0.524739 1.1:+76564160 MS.gene76818:CDS
CCTGCGCAGGGAAGGAGGAA+AGG 0.528342 1.1:-76563760 None:intergenic
CTATACTCGAATAAACACTT+TGG 0.530280 1.1:+76563440 MS.gene76818:CDS
CAAATCTTCTCAAGCTGTGT+GGG 0.532500 1.1:-76564452 None:intergenic
CATGATGATGCAAAAGAAAG+AGG 0.534396 1.1:-76564065 None:intergenic
AGGTTGGTTGAATCCTCTAC+GGG 0.534507 1.1:+76564245 MS.gene76818:CDS
GGATTCTTATCTGAGGAGGT+TGG 0.538544 1.1:+76564229 MS.gene76818:CDS
TTTGGAGCAAAAGTTGAAGA+AGG 0.544038 1.1:+76564157 MS.gene76818:CDS
AGATCAATTCAAATGCAGTA+CGG 0.546197 1.1:+76563732 MS.gene76818:CDS
TTTGCAGAACTTCTATGAGG+TGG 0.546643 1.1:-76563663 None:intergenic
CGAGAAACCTGTTTCAGCAA+TGG 0.547921 1.1:+76564101 MS.gene76818:CDS
GGAGAAGAGGTTGAACAGCT+TGG 0.548058 1.1:+76563957 MS.gene76818:CDS
TTCTGTTGAAGATGGAGAAG+AGG 0.551162 1.1:+76563944 MS.gene76818:CDS
GAAGAGGTTGAACAGCTTGG+TGG 0.570051 1.1:+76563960 MS.gene76818:CDS
AAGGTTGGTAATGAGAAAGC+TGG 0.570371 1.1:+76563486 MS.gene76818:CDS
GGAAATGAGCACCGAAGACA+AGG 0.573628 1.1:+76564290 MS.gene76818:CDS
GCAACAGAACTGAATTCCCT+TGG 0.575279 1.1:+76563906 MS.gene76818:CDS
CTTGGGATATCCATGAACTC+TGG 0.577590 1.1:+76564029 MS.gene76818:CDS
AAGGGATGCTTACGGGTCGT+CGG 0.583401 1.1:+76563805 MS.gene76818:CDS
AAATCTATTGAATAATGCAA+TGG 0.585677 1.1:+76564208 MS.gene76818:CDS
CAATGGATTCTTATCTGAGG+AGG 0.586354 1.1:+76564225 MS.gene76818:CDS
CAATCTGGTCCAAGAACTTG+TGG 0.587282 1.1:-76564428 None:intergenic
GGAGTGCTTTGGGACAGTTA+GGG 0.587349 1.1:+76563826 MS.gene76818:CDS
AATAGGAGGTCTGCTGCCAA+GGG 0.591370 1.1:-76563922 None:intergenic
TCCTCAAAGATGATGTGTCA+GGG 0.591816 1.1:-76564130 None:intergenic
CTAATGAGTTGATTATGAAG+AGG 0.601588 1.1:-76563606 None:intergenic
GGAGGGTTTAACCGTGACAG+TGG 0.613409 1.1:+76564178 MS.gene76818:CDS
TTGCATCACGACGATTGGGA+AGG 0.614716 1.1:+76563575 MS.gene76818:CDS
ATTTACACAATCCACTGTCA+CGG 0.617053 1.1:-76564189 None:intergenic
TTTCCTCCTTCCCTGCGCAG+GGG 0.617506 1.1:+76563762 MS.gene76818:CDS
ACAAATCTTCTCAAGCTGTG+TGG 0.623174 1.1:-76564453 None:intergenic
CCATCTTCAACAGAAATAGG+AGG 0.624160 1.1:-76563936 None:intergenic
TTGCTGAAACAGGTTTCTCG+AGG 0.634655 1.1:-76564098 None:intergenic
TCTTTAGATCCAAGGTTTCG+GGG 0.636693 1.1:-76563852 None:intergenic
AGTTCATGGATATCCCAAGA+GGG 0.641024 1.1:-76564025 None:intergenic
ACCAGATGATAAACCCGTAG+AGG 0.642255 1.1:-76564258 None:intergenic
ATGCAATGGATTCTTATCTG+AGG 0.661587 1.1:+76564222 MS.gene76818:CDS
ATCAATTCAAATGCAGTACG+GGG 0.669889 1.1:+76563734 MS.gene76818:CDS
GGTTAGTTCAAAGATCAGCA+AGG 0.679940 1.1:+76563536 MS.gene76818:CDS
GTTCATGGATATCCCAAGAG+GGG 0.692618 1.1:-76564024 None:intergenic
GAGTTCATGGATATCCCAAG+AGG 0.695777 1.1:-76564026 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTATTGAATAATGCAA+TGG + chr1.1:76564208-76564227 MS.gene76818:CDS 20.0%
! TCTTCATAATCAACTCATTA+GGG + chr1.1:76563608-76563627 MS.gene76818:CDS 25.0%
! TGAATGCTAAAGATTCAAAT+CGG + chr1.1:76563700-76563719 MS.gene76818:CDS 25.0%
!! TTATCATCTGGTTTAAGATT+CGG + chr1.1:76564269-76564288 MS.gene76818:CDS 25.0%
AAGTTCTGCAAAAAAAGAGA+GGG + chr1.1:76563674-76563693 MS.gene76818:CDS 30.0%
AATCTTTAGATCCAAGGTTT+CGG - chr1.1:76563857-76563876 None:intergenic 30.0%
AGATCAAATCTTTAGATCCA+AGG - chr1.1:76563863-76563882 None:intergenic 30.0%
AGATCAATTCAAATGCAGTA+CGG + chr1.1:76563732-76563751 MS.gene76818:CDS 30.0%
CTATACTCGAATAAACACTT+TGG + chr1.1:76563440-76563459 MS.gene76818:CDS 30.0%
CTCTTCATAATCAACTCATT+AGG + chr1.1:76563607-76563626 MS.gene76818:CDS 30.0%
GAAAGCTGTTATTGTAAAGA+AGG + chr1.1:76563467-76563486 MS.gene76818:CDS 30.0%
GAATTAAATCCACAAGTTCT+TGG + chr1.1:76564419-76564438 MS.gene76818:CDS 30.0%
!! ATTCGAGTATAGTTTTGCTT+TGG - chr1.1:76563432-76563451 None:intergenic 30.0%
!! CTAATGAGTTGATTATGAAG+AGG - chr1.1:76563609-76563628 None:intergenic 30.0%
!!! TTTTTTGCAGAACTTCTATG+AGG - chr1.1:76563669-76563688 None:intergenic 30.0%
ATATCCATGAACTCTGGTTA+TGG + chr1.1:76564035-76564054 MS.gene76818:CDS 35.0%
ATCAATTCAAATGCAGTACG+GGG + chr1.1:76563734-76563753 MS.gene76818:CDS 35.0%
ATCTTTAGATCCAAGGTTTC+GGG - chr1.1:76563856-76563875 None:intergenic 35.0%
ATTTACACAATCCACTGTCA+CGG - chr1.1:76564192-76564211 None:intergenic 35.0%
GAAGTTCTGCAAAAAAAGAG+AGG + chr1.1:76563673-76563692 MS.gene76818:CDS 35.0%
GATCAATTCAAATGCAGTAC+GGG + chr1.1:76563733-76563752 MS.gene76818:CDS 35.0%
GCTGTTATTGTAAAGAAGGT+TGG + chr1.1:76563471-76563490 MS.gene76818:CDS 35.0%
GCTGTTTGCATATACATTCT+GGG - chr1.1:76564353-76564372 None:intergenic 35.0%
TACTTTGAATGCTTGAGCTT+GGG - chr1.1:76563989-76564008 None:intergenic 35.0%
TCTCCATCTTCAACAGAAAT+AGG - chr1.1:76563942-76563961 None:intergenic 35.0%
TTACTTTGAATGCTTGAGCT+TGG - chr1.1:76563990-76564009 None:intergenic 35.0%
! ATGCAATGGATTCTTATCTG+AGG + chr1.1:76564222-76564241 MS.gene76818:CDS 35.0%
! CATGATGATGCAAAAGAAAG+AGG - chr1.1:76564068-76564087 None:intergenic 35.0%
! TGCTGTTTGCATATACATTC+TGG - chr1.1:76564354-76564373 None:intergenic 35.0%
! TTTGGAGCAAAAGTTGAAGA+AGG + chr1.1:76564157-76564176 MS.gene76818:CDS 35.0%
AAGATTTGCATCACGACGAT+TGG + chr1.1:76563570-76563589 MS.gene76818:CDS 40.0%
ACAAATCTTCTCAAGCTGTG+TGG - chr1.1:76564456-76564475 None:intergenic 40.0%
ACTGTCCATTTCCTTGTCTT+CGG - chr1.1:76564304-76564323 None:intergenic 40.0%
AGATTTGCATCACGACGATT+GGG + chr1.1:76563571-76563590 MS.gene76818:CDS 40.0%
AGTTCATGGATATCCCAAGA+GGG - chr1.1:76564028-76564047 None:intergenic 40.0%
CAAATCTTCTCAAGCTGTGT+GGG - chr1.1:76564455-76564474 None:intergenic 40.0%
CCATCTTCAACAGAAATAGG+AGG - chr1.1:76563939-76563958 None:intergenic 40.0%
GAGATATCCATTGCTGAAAC+AGG - chr1.1:76564111-76564130 None:intergenic 40.0%
GAGCAAAAGTTGAAGAAGGA+GGG + chr1.1:76564161-76564180 MS.gene76818:CDS 40.0%
GTACGTACTTTGATCAGCTT+GGG + chr1.1:76563508-76563527 MS.gene76818:CDS 40.0%
GTTCTTTGGCTACTTGTGAA+GGG + chr1.1:76563787-76563806 MS.gene76818:CDS 40.0%
TACTTGTGAAGGGATGCTTA+CGG + chr1.1:76563797-76563816 MS.gene76818:CDS 40.0%
TCCTCAAAGATGATGTGTCA+GGG - chr1.1:76564133-76564152 None:intergenic 40.0%
TCTTTAGATCCAAGGTTTCG+GGG - chr1.1:76563855-76563874 None:intergenic 40.0%
TTCTGTTGAAGATGGAGAAG+AGG + chr1.1:76563944-76563963 MS.gene76818:CDS 40.0%
TTTGCAGAACTTCTATGAGG+TGG - chr1.1:76563666-76563685 None:intergenic 40.0%
! ATCATCTTTGAGGAGTCGTT+TGG + chr1.1:76564139-76564158 MS.gene76818:CDS 40.0%
! CAATGGATTCTTATCTGAGG+AGG + chr1.1:76564225-76564244 MS.gene76818:CDS 40.0%
! GGTTAGTTCAAAGATCAGCA+AGG + chr1.1:76563536-76563555 MS.gene76818:CDS 40.0%
!! AAGGTTGGTAATGAGAAAGC+TGG + chr1.1:76563486-76563505 MS.gene76818:CDS 40.0%
!! CCTCCTATTTCTGTTGAAGA+TGG + chr1.1:76563936-76563955 MS.gene76818:CDS 40.0%
ACCAGATGATAAACCCGTAG+AGG - chr1.1:76564261-76564280 None:intergenic 45.0%
ACGTCCATAACCAGAGTTCA+TGG - chr1.1:76564042-76564061 None:intergenic 45.0%
ACTTGTGAAGGGATGCTTAC+GGG + chr1.1:76563798-76563817 MS.gene76818:CDS 45.0%
ATCTTCTTGCGCATCTCTCT+TGG + chr1.1:76564379-76564398 MS.gene76818:CDS 45.0%
CAATCTGGTCCAAGAACTTG+TGG - chr1.1:76564431-76564450 None:intergenic 45.0%
CACAAGTTCTTGGACCAGAT+TGG + chr1.1:76564429-76564448 MS.gene76818:CDS 45.0%
CGAGAAACCTGTTTCAGCAA+TGG + chr1.1:76564101-76564120 MS.gene76818:CDS 45.0%
CTCCTCAAAGATGATGTGTC+AGG - chr1.1:76564134-76564153 None:intergenic 45.0%
CTTGGGATATCCATGAACTC+TGG + chr1.1:76564029-76564048 MS.gene76818:CDS 45.0%
CTTTGATCAGCTTGGGAAGT+TGG + chr1.1:76563515-76563534 MS.gene76818:CDS 45.0%
GAGTTCATGGATATCCCAAG+AGG - chr1.1:76564029-76564048 None:intergenic 45.0%
GCAACAGAACTGAATTCCCT+TGG + chr1.1:76563906-76563925 MS.gene76818:CDS 45.0%
GGAGCAAAAGTTGAAGAAGG+AGG + chr1.1:76564160-76564179 MS.gene76818:CDS 45.0%
GGATTCTTATCTGAGGAGGT+TGG + chr1.1:76564229-76564248 MS.gene76818:CDS 45.0%
GGTACGTACTTTGATCAGCT+TGG + chr1.1:76563507-76563526 MS.gene76818:CDS 45.0%
GGTTCTTTGGCTACTTGTGA+AGG + chr1.1:76563786-76563805 MS.gene76818:CDS 45.0%
GTTCATGGATATCCCAAGAG+GGG - chr1.1:76564027-76564046 None:intergenic 45.0%
TCCCTGACACATCATCTTTG+AGG + chr1.1:76564129-76564148 MS.gene76818:CDS 45.0%
TCCTCTACGGGTTTATCATC+TGG + chr1.1:76564257-76564276 MS.gene76818:CDS 45.0%
TTGCTGAAACAGGTTTCTCG+AGG - chr1.1:76564101-76564120 None:intergenic 45.0%
! AGGTTGGTTGAATCCTCTAC+GGG + chr1.1:76564245-76564264 MS.gene76818:CDS 45.0%
! CTTGGATTTTCGCGTTGCAA+TGG + chr1.1:76564397-76564416 MS.gene76818:CDS 45.0%
! GAGGTTGGTTGAATCCTCTA+CGG + chr1.1:76564244-76564263 MS.gene76818:CDS 45.0%
AAATAGGAGGTCTGCTGCCA+AGG - chr1.1:76563926-76563945 None:intergenic 50.0%
AATAGGAGGTCTGCTGCCAA+GGG - chr1.1:76563925-76563944 None:intergenic 50.0%
GAAGAGGTTGAACAGCTTGG+TGG + chr1.1:76563960-76563979 MS.gene76818:CDS 50.0%
GGAGAAGAGGTTGAACAGCT+TGG + chr1.1:76563957-76563976 MS.gene76818:CDS 50.0%
TTGCATCACGACGATTGGGA+AGG + chr1.1:76563575-76563594 MS.gene76818:CDS 50.0%
!! GAGCACCGAAGACAAGGAAA+TGG + chr1.1:76564296-76564315 MS.gene76818:CDS 50.0%
!! GGAAATGAGCACCGAAGACA+AGG + chr1.1:76564290-76564309 MS.gene76818:CDS 50.0%
!! GGAGTGCTTTGGGACAGTTA+GGG + chr1.1:76563826-76563845 MS.gene76818:CDS 50.0%
AAGGGATGCTTACGGGTCGT+CGG + chr1.1:76563805-76563824 MS.gene76818:CDS 55.0%
GGAGGGTTTAACCGTGACAG+TGG + chr1.1:76564178-76564197 MS.gene76818:CDS 55.0%
TCAAGCTGTGTGGGCCAATC+TGG - chr1.1:76564446-76564465 None:intergenic 55.0%
TCTGTTGCACTCTGCTGCTC+TGG - chr1.1:76563894-76563913 None:intergenic 55.0%
TTAGGGAAGCCCCGAAACCT+TGG + chr1.1:76563843-76563862 MS.gene76818:CDS 55.0%
!! CGGAGTGCTTTGGGACAGTT+AGG + chr1.1:76563825-76563844 MS.gene76818:CDS 55.0%
AGTCCTGTTGCAGCCCCTCT+TGG + chr1.1:76564011-76564030 MS.gene76818:CDS 60.0%
ATCCCAAGAGGGGCTGCAAC+AGG - chr1.1:76564017-76564036 None:intergenic 60.0%
CAAAGAACCACCCCTGCGCA+GGG - chr1.1:76563775-76563794 None:intergenic 60.0%
CTTTCCTCCTTCCCTGCGCA+GGG + chr1.1:76563761-76563780 MS.gene76818:CDS 60.0%
GTCCTGTTGCAGCCCCTCTT+GGG + chr1.1:76564012-76564031 MS.gene76818:CDS 60.0%
TTTCCTCCTTCCCTGCGCAG+GGG + chr1.1:76563762-76563781 MS.gene76818:CDS 60.0%
! ACGGGTCGTCGGAGTGCTTT+GGG + chr1.1:76563816-76563835 MS.gene76818:CDS 60.0%
! TACGGGTCGTCGGAGTGCTT+TGG + chr1.1:76563815-76563834 MS.gene76818:CDS 60.0%
CCAAAGAACCACCCCTGCGC+AGG - chr1.1:76563776-76563795 None:intergenic 65.0%
CCTGCGCAGGGAAGGAGGAA+AGG - chr1.1:76563763-76563782 None:intergenic 65.0%
CCTGCGCAGGGGTGGTTCTT+TGG + chr1.1:76563773-76563792 MS.gene76818:CDS 65.0%
CCTTTCCTCCTTCCCTGCGC+AGG + chr1.1:76563760-76563779 MS.gene76818:CDS 65.0%
GAACCACCCCTGCGCAGGGA+AGG - chr1.1:76563771-76563790 None:intergenic 70.0%
CCACCCCTGCGCAGGGAAGG+AGG - chr1.1:76563768-76563787 None:intergenic 75.0%
CCTCCTTCCCTGCGCAGGGG+TGG + chr1.1:76563765-76563784 MS.gene76818:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 76563420 76564496 76563420 ID=MS.gene76818
chr1.1 mRNA 76563420 76564496 76563420 ID=MS.gene76818.t1;Parent=MS.gene76818
chr1.1 exon 76563420 76564496 76563420 ID=MS.gene76818.t1.exon1;Parent=MS.gene76818.t1
chr1.1 CDS 76563420 76564496 76563420 ID=cds.MS.gene76818.t1;Parent=MS.gene76818.t1
Gene Sequence

>MS.gene76818

ATGACGGTACCAAAGCAAAACTATACTCGAATAAACACTTTGGAGCTGAAAGCTGTTATTGTAAAGAAGGTTGGTAATGAGAAAGCTGGTACGTACTTTGATCAGCTTGGGAAGTTGGTTAGTTCAAAGATCAGCAAGGCTGAGTTTGACAAGATTTGCATCACGACGATTGGGAAGGAAAATGTTCCTCTTCATAATCAACTCATTAGGGCAATTCTGAAGAATGTTTGTTTGTCTAAAGTTCCACCTCATAGAAGTTCTGCAAAAAAAGAGAGGGTCTTGAATGCTAAAGATTCAAATCGGCAGCAGAGCAGATCAATTCAAATGCAGTACGGGGATGCCTTTCCTCCTTCCCTGCGCAGGGGTGGTTCTTTGGCTACTTGTGAAGGGATGCTTACGGGTCGTCGGAGTGCTTTGGGACAGTTAGGGAAGCCCCGAAACCTTGGATCTAAAGATTTGATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGCAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGCTTGGTGGAAGCCCAAGCTCAAGCATTCAAAGTAAGAGTCCTGTTGCAGCCCCTCTTGGGATATCCATGAACTCTGGTTATGGACGTAGTCCTCTTTCTTTTGCATCATCATGCAGAAAGCATCCTCGAGAAACCTGTTTCAGCAATGGATATCTCCCTGACACATCATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGAAGAAGGAGGGTTTAACCGTGACAGTGGATTGTGTAAATCTATTGAATAATGCAATGGATTCTTATCTGAGGAGGTTGGTTGAATCCTCTACGGGTTTATCATCTGGTTTAAGATTCGGAAATGAGCACCGAAGACAAGGAAATGGACAGTCAATAGCTGATTCAACTATACTGCAACCCAGAATGTATATGCAAACAGCAACACAATCTTCTTGCGCATCTCTCTTGGATTTTCGCGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTAATGAATGA
Protein sequence

>MS.gene76818.t1

MTVPKQNYTRINTLELKAVIVKKVGNEKAGTYFDQLGKLVSSKISKAEFDKICITTIGKENVPLHNQLIRAILKNVCLSKVPPHRSSAKKERVLNAKDSNRQQSRSIQMQYGDAFPPSLRRGGSLATCEGMLTGRRSALGQLGKPRNLGSKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQLGGSPSSSIQSKSPVAAPLGISMNSGYGRSPLSFASSCRKHPRETCFSNGYLPDTSSLRSRLEQKLKKEGLTVTVDCVNLLNNAMDSYLRRLVESSTGLSSGLRFGNEHRRQGNGQSIADSTILQPRMYMQTATQSSCASLLDFRVAMELNPQVLGPDWPTQLEKICIRASNE