AlfalfaGEDB | MS.gene91296

M. sativa cultivar XinJiangDaYe / MS.gene91296

KEGG: -
GO: GO:0000123 GO:0005575 GO:0031248 GO:0032991 GO:0070461 GO:1902493 GO:1902494 GO:1990234
PFAM: PF12767.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91296.t1	XP_013469993.1	97.5	358	9	0	1	358	1	358	1.60E-193	685.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91296.t1	A0A072VQT3	97.5	358	9	0	1	358	1	358	1.1e-193	685.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049283	MS.gene91296	0.807371	5.22E-50	-1.69E-46
MS.gene049499	MS.gene91296	0.807158	5.79E-50	-1.69E-46
MS.gene056776	MS.gene91296	0.805628	1.22E-49	-1.69E-46
MS.gene057155	MS.gene91296	0.811744	6.01E-51	-1.69E-46
MS.gene058223	MS.gene91296	-0.806613	7.56E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene76818	MS.gene91296	PPI
MS.gene91296	MS.gene71629	PPI
MS.gene91296	MS.gene060280	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91296.t1	MTR_1g106765	97.486	358	9	0	1	358	1	358	0.0	717
MS.gene91296.t1	MTR_1g009690	33.645	428	198	18	6	358	4	420	1.55e-46	164
MS.gene91296.t1	MTR_1g009710	33.724	427	193	18	6	355	4	417	9.07e-45	159
MS.gene91296.t1	MTR_4g095490	38.049	205	114	5	156	358	262	455	1.01e-27	113
MS.gene91296.t1	MTR_4g095490	41.489	94	52	2	8	100	7	98	2.55e-14	74.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91296.t1	AT4G33890	43.767	361	172	10	6	358	5	342	2.99e-85	262
MS.gene91296.t1	AT4G33890	43.767	361	172	10	6	358	5	342	2.99e-85	262
MS.gene91296.t1	AT2G14850	41.808	354	138	8	6	358	5	291	3.13e-80	247
MS.gene91296.t1	AT4G31440	34.109	387	188	15	10	353	8	370	7.93e-46	160
MS.gene91296.t1	AT5G67410	32.033	359	165	10	1	354	1	285	4.45e-42	148
MS.gene91296.t1	AT5G67410	32.033	359	165	10	1	354	1	285	4.45e-42	148
MS.gene91296.t1	AT2G24530	32.258	403	211	15	10	358	8	402	4.71e-39	143
MS.gene91296.t1	AT2G24530	32.258	403	211	15	10	358	8	402	4.71e-39	143

Find 98 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTTTAGATCCAAGGTTTC+GGG	0.184229	1.3:-73109864	None:intergenic
CCTGCGCAGGGGTGGTTCTT+TGG	0.220322	1.3:+73109784	MS.gene91296:CDS
TGCTGTTTGCATATACATTC+TGG	0.230602	1.3:-73110362	None:intergenic
TCTCCATCTTCAACAGAAAT+AGG	0.282741	1.3:-73109950	None:intergenic
GAATTAAATCCACAAGTTCT+TGG	0.301140	1.3:+73110430	MS.gene91296:CDS
TCAAGCTGTGTGGGCCAATC+TGG	0.313228	1.3:-73110454	None:intergenic
TCTTCATAATCAACTCATTA+GGG	0.313745	1.3:+73109619	MS.gene91296:CDS
CGGAGTGCTTTGGGACAGTT+AGG	0.314718	1.3:+73109836	MS.gene91296:CDS
TACTTTGAATGCTTGAGCTT+GGG	0.342324	1.3:-73109997	None:intergenic
TACGGGTCGTCGGAGTGCTT+TGG	0.346552	1.3:+73109826	MS.gene91296:CDS
ATCTTCTTGCGCATCTCTCT+TGG	0.347790	1.3:+73110390	MS.gene91296:CDS
ACGGGTCGTCGGAGTGCTTT+GGG	0.349062	1.3:+73109827	MS.gene91296:CDS
TCCTCTACGGGTTTATCATC+TGG	0.353714	1.3:+73110268	MS.gene91296:CDS
CTCTTCATAATCAACTCATT+AGG	0.354368	1.3:+73109618	MS.gene91296:CDS
AATCTTTAGATCCAAGGTTT+CGG	0.356774	1.3:-73109865	None:intergenic
TCTGTTGCACTCTGCTGCTC+TGG	0.359317	1.3:-73109902	None:intergenic
CCTTTCCTCCTTCCCTGCGC+AGG	0.360688	1.3:+73109771	MS.gene91296:CDS
AGTCCTGTTGCAGCCCCTCT+TGG	0.364308	1.3:+73110022	MS.gene91296:CDS
ACTGTCCATTTCCTTGTCTT+CGG	0.375162	1.3:-73110312	None:intergenic
TTATCATCTGGTTTAAGATT+CGG	0.388055	1.3:+73110280	MS.gene91296:CDS
ATCATCTTTGAGGAGTCGTT+TGG	0.388549	1.3:+73110150	MS.gene91296:CDS
CTTTCCTCCTTCCCTGCGCA+GGG	0.395040	1.3:+73109772	MS.gene91296:CDS
ATCCCAAGAGGGGCTGCAAC+AGG	0.401354	1.3:-73110025	None:intergenic
GCTGTTTGCATATACATTCT+GGG	0.415038	1.3:-73110361	None:intergenic
CTTTGATCAGCTTGGGAAGT+TGG	0.420393	1.3:+73109526	MS.gene91296:CDS
TTACTTTGAATGCTTGAGCT+TGG	0.422875	1.3:-73109998	None:intergenic
CCTCCTATTTCTGTTGAAGA+TGG	0.424695	1.3:+73109947	MS.gene91296:CDS
ACTTGTGAAGGGATGCTTAC+GGG	0.424873	1.3:+73109809	MS.gene91296:CDS
GAGATATCCATTGCTGAAAC+AGG	0.424894	1.3:-73110119	None:intergenic
ACGTCCATAACCAGAGTTCA+TGG	0.428298	1.3:-73110050	None:intergenic
ATATCCATGAACTCTGGTTA+TGG	0.429292	1.3:+73110046	MS.gene91296:CDS
GGTTCTTTGGCTACTTGTGA+AGG	0.430531	1.3:+73109797	MS.gene91296:CDS
GTCCTGTTGCAGCCCCTCTT+GGG	0.433856	1.3:+73110023	MS.gene91296:CDS
GAAAGCTGTTATTGTAAAGA+AGG	0.435298	1.3:+73109478	MS.gene91296:CDS
AAGATTTGCATCACGACGAT+TGG	0.436849	1.3:+73109581	MS.gene91296:CDS
CACAAGTTCTTGGACCAGAT+TGG	0.441697	1.3:+73110440	MS.gene91296:CDS
CTCCTCAAAGATGATGTGTC+AGG	0.443797	1.3:-73110142	None:intergenic
GCTGTTATTGTAAAGAAGGT+TGG	0.449917	1.3:+73109482	MS.gene91296:CDS
CCAAAGAACCACCCCTGCGC+AGG	0.452604	1.3:-73109784	None:intergenic
CCTCCTTCCCTGCGCAGGGG+TGG	0.457550	1.3:+73109776	MS.gene91296:CDS
TCCCTGACACATCATCTTTG+AGG	0.457686	1.3:+73110140	MS.gene91296:CDS
GTACGTACTTTGATCAGCTT+GGG	0.458271	1.3:+73109519	MS.gene91296:CDS
GGTACGTACTTTGATCAGCT+TGG	0.478644	1.3:+73109518	MS.gene91296:CDS
AAATAGGAGGTCTGCTGCCA+AGG	0.481417	1.3:-73109934	None:intergenic
GAGGTTGGTTGAATCCTCTA+CGG	0.483248	1.3:+73110255	MS.gene91296:CDS
GAACCACCCCTGCGCAGGGA+AGG	0.484271	1.3:-73109779	None:intergenic
GAGCACCGAAGACAAGGAAA+TGG	0.489060	1.3:+73110307	MS.gene91296:CDS
AGATTTGCATCACGACGATT+GGG	0.489555	1.3:+73109582	MS.gene91296:CDS
TGAATGCAAAAGATTCAAAT+CGG	0.493157	1.3:+73109711	MS.gene91296:CDS
GATCAATTCAAATGCAGTAC+GGG	0.494773	1.3:+73109744	MS.gene91296:CDS
GAGCAAAAGTTGAAGAAGGA+GGG	0.501177	1.3:+73110172	MS.gene91296:CDS
CCACCCCTGCGCAGGGAAGG+AGG	0.507160	1.3:-73109776	None:intergenic
GTTCTTTGGCTACTTGTGAA+GGG	0.512894	1.3:+73109798	MS.gene91296:CDS
TTAGGGAAGCCCCGAAACCT+TGG	0.514470	1.3:+73109854	MS.gene91296:CDS
CAAAGAACCACCCCTGCGCA+GGG	0.521532	1.3:-73109783	None:intergenic
TACTTGTGAAGGGATGCTTA+CGG	0.521551	1.3:+73109808	MS.gene91296:CDS
AGATCAAATCTTTAGATCCA+AGG	0.521702	1.3:-73109871	None:intergenic
GGAGCAAAAGTTGAAGAAGG+AGG	0.524739	1.3:+73110171	MS.gene91296:CDS
CCTGCGCAGGGAAGGAGGAA+AGG	0.528342	1.3:-73109771	None:intergenic
CTATACTCGAATAAACACTT+TGG	0.530280	1.3:+73109451	MS.gene91296:CDS
CAAATCTTCTCAAGCTGTGT+GGG	0.532500	1.3:-73110463	None:intergenic
CATGATGATGCAAAAGAAAG+AGG	0.534396	1.3:-73110076	None:intergenic
AGGTTGGTTGAATCCTCTAC+GGG	0.534507	1.3:+73110256	MS.gene91296:CDS
GGATTCTTATCTGAGGAGGT+TGG	0.538544	1.3:+73110240	MS.gene91296:CDS
TTTGGAGCAAAAGTTGAAGA+AGG	0.544038	1.3:+73110168	MS.gene91296:CDS
AGATCAATTCAAATGCAGTA+CGG	0.546197	1.3:+73109743	MS.gene91296:CDS
TTTGCAGAACTTCTATGAGG+TGG	0.546643	1.3:-73109674	None:intergenic
CGAGAAACCTGTTTCAGCAA+TGG	0.547921	1.3:+73110112	MS.gene91296:CDS
GGAGAAGAGGTTGAACAGCT+TGG	0.548058	1.3:+73109968	MS.gene91296:CDS
TTCTGTTGAAGATGGAGAAG+AGG	0.551162	1.3:+73109955	MS.gene91296:CDS
GAAGAGGTTGAACAGCTTGG+TGG	0.570051	1.3:+73109971	MS.gene91296:CDS
AAGGTTGGTAATGAGAAAGC+TGG	0.570371	1.3:+73109497	MS.gene91296:CDS
GGAAATGAGCACCGAAGACA+AGG	0.573628	1.3:+73110301	MS.gene91296:CDS
GCAACAGAACTGAATTCCCT+TGG	0.575279	1.3:+73109917	MS.gene91296:CDS
CTTGGGATATCCATGAACTC+TGG	0.577590	1.3:+73110040	MS.gene91296:CDS
AAGGGATGCTTACGGGTCGT+CGG	0.583401	1.3:+73109816	MS.gene91296:CDS
AAATCTATTGAATAATGCAA+TGG	0.585677	1.3:+73110219	MS.gene91296:CDS
CAATGGATTCTTATCTGAGG+AGG	0.586354	1.3:+73110236	MS.gene91296:CDS
CAATCTGGTCCAAGAACTTG+TGG	0.587282	1.3:-73110439	None:intergenic
GGAGTGCTTTGGGACAGTTA+GGG	0.587349	1.3:+73109837	MS.gene91296:CDS
AATAGGAGGTCTGCTGCCAA+GGG	0.591370	1.3:-73109933	None:intergenic
TCCTCAAAGATGATGTGTCA+GGG	0.591816	1.3:-73110141	None:intergenic
CTAATGAGTTGATTATGAAG+AGG	0.601588	1.3:-73109617	None:intergenic
GGAGGGTTTAACCGTGACAG+TGG	0.613409	1.3:+73110189	MS.gene91296:CDS
TTGCATCACGACGATTGGGA+AGG	0.614716	1.3:+73109586	MS.gene91296:CDS
ATTTACACAATCCACTGTCA+CGG	0.617053	1.3:-73110200	None:intergenic
TTTCCTCCTTCCCTGCGCAG+GGG	0.617506	1.3:+73109773	MS.gene91296:CDS
ACAAATCTTCTCAAGCTGTG+TGG	0.623174	1.3:-73110464	None:intergenic
CCATCTTCAACAGAAATAGG+AGG	0.624160	1.3:-73109947	None:intergenic
TTGCTGAAACAGGTTTCTCG+AGG	0.634655	1.3:-73110109	None:intergenic
TCTTTAGATCCAAGGTTTCG+GGG	0.636693	1.3:-73109863	None:intergenic
AGTTCATGGATATCCCAAGA+GGG	0.641024	1.3:-73110036	None:intergenic
ACCAGATGATAAACCCGTAG+AGG	0.642255	1.3:-73110269	None:intergenic
ATGCAATGGATTCTTATCTG+AGG	0.661587	1.3:+73110233	MS.gene91296:CDS
ATCAATTCAAATGCAGTACG+GGG	0.669889	1.3:+73109745	MS.gene91296:CDS
GGTTAGTTCAAAGATCAGCA+AGG	0.679940	1.3:+73109547	MS.gene91296:CDS
GTTCATGGATATCCCAAGAG+GGG	0.692618	1.3:-73110035	None:intergenic
GAGTTCATGGATATCCCAAG+AGG	0.695777	1.3:-73110037	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATCTATTGAATAATGCAA+TGG	+	chr1.3:73110219-73110238	MS.gene91296:CDS	20.0%
!	TCTTCATAATCAACTCATTA+GGG	+	chr1.3:73109619-73109638	MS.gene91296:CDS	25.0%
!	TGAATGCAAAAGATTCAAAT+CGG	+	chr1.3:73109711-73109730	MS.gene91296:CDS	25.0%
!!	TTATCATCTGGTTTAAGATT+CGG	+	chr1.3:73110280-73110299	MS.gene91296:CDS	25.0%
	AAGTTCTGCAAAAAAAGAGA+GGG	+	chr1.3:73109685-73109704	MS.gene91296:CDS	30.0%
	AATCTTTAGATCCAAGGTTT+CGG	-	chr1.3:73109868-73109887	None:intergenic	30.0%
	AGATCAAATCTTTAGATCCA+AGG	-	chr1.3:73109874-73109893	None:intergenic	30.0%
	AGATCAATTCAAATGCAGTA+CGG	+	chr1.3:73109743-73109762	MS.gene91296:CDS	30.0%
	CTATACTCGAATAAACACTT+TGG	+	chr1.3:73109451-73109470	MS.gene91296:CDS	30.0%
	CTCTTCATAATCAACTCATT+AGG	+	chr1.3:73109618-73109637	MS.gene91296:CDS	30.0%
	GAAAGCTGTTATTGTAAAGA+AGG	+	chr1.3:73109478-73109497	MS.gene91296:CDS	30.0%
	GAATTAAATCCACAAGTTCT+TGG	+	chr1.3:73110430-73110449	MS.gene91296:CDS	30.0%
!!	ATTCGAGTATAGTTTTGCTT+TGG	-	chr1.3:73109443-73109462	None:intergenic	30.0%
!!	CTAATGAGTTGATTATGAAG+AGG	-	chr1.3:73109620-73109639	None:intergenic	30.0%
!!!	TTTTTTGCAGAACTTCTATG+AGG	-	chr1.3:73109680-73109699	None:intergenic	30.0%
	ATATCCATGAACTCTGGTTA+TGG	+	chr1.3:73110046-73110065	MS.gene91296:CDS	35.0%
	ATCAATTCAAATGCAGTACG+GGG	+	chr1.3:73109745-73109764	MS.gene91296:CDS	35.0%
	ATCTTTAGATCCAAGGTTTC+GGG	-	chr1.3:73109867-73109886	None:intergenic	35.0%
	ATTTACACAATCCACTGTCA+CGG	-	chr1.3:73110203-73110222	None:intergenic	35.0%
	GAAGTTCTGCAAAAAAAGAG+AGG	+	chr1.3:73109684-73109703	MS.gene91296:CDS	35.0%
	GATCAATTCAAATGCAGTAC+GGG	+	chr1.3:73109744-73109763	MS.gene91296:CDS	35.0%
	GCTGTTATTGTAAAGAAGGT+TGG	+	chr1.3:73109482-73109501	MS.gene91296:CDS	35.0%
	GCTGTTTGCATATACATTCT+GGG	-	chr1.3:73110364-73110383	None:intergenic	35.0%
	TACTTTGAATGCTTGAGCTT+GGG	-	chr1.3:73110000-73110019	None:intergenic	35.0%
	TCTCCATCTTCAACAGAAAT+AGG	-	chr1.3:73109953-73109972	None:intergenic	35.0%
	TTACTTTGAATGCTTGAGCT+TGG	-	chr1.3:73110001-73110020	None:intergenic	35.0%
!	ATGCAATGGATTCTTATCTG+AGG	+	chr1.3:73110233-73110252	MS.gene91296:CDS	35.0%
!	CATGATGATGCAAAAGAAAG+AGG	-	chr1.3:73110079-73110098	None:intergenic	35.0%
!	TGCTGTTTGCATATACATTC+TGG	-	chr1.3:73110365-73110384	None:intergenic	35.0%
!	TTTGGAGCAAAAGTTGAAGA+AGG	+	chr1.3:73110168-73110187	MS.gene91296:CDS	35.0%
	AAGATTTGCATCACGACGAT+TGG	+	chr1.3:73109581-73109600	MS.gene91296:CDS	40.0%
	ACAAATCTTCTCAAGCTGTG+TGG	-	chr1.3:73110467-73110486	None:intergenic	40.0%
	ACTGTCCATTTCCTTGTCTT+CGG	-	chr1.3:73110315-73110334	None:intergenic	40.0%
	AGATTTGCATCACGACGATT+GGG	+	chr1.3:73109582-73109601	MS.gene91296:CDS	40.0%
	AGTTCATGGATATCCCAAGA+GGG	-	chr1.3:73110039-73110058	None:intergenic	40.0%
	CAAATCTTCTCAAGCTGTGT+GGG	-	chr1.3:73110466-73110485	None:intergenic	40.0%
	CCATCTTCAACAGAAATAGG+AGG	-	chr1.3:73109950-73109969	None:intergenic	40.0%
	GAGATATCCATTGCTGAAAC+AGG	-	chr1.3:73110122-73110141	None:intergenic	40.0%
	GAGCAAAAGTTGAAGAAGGA+GGG	+	chr1.3:73110172-73110191	MS.gene91296:CDS	40.0%
	GTACGTACTTTGATCAGCTT+GGG	+	chr1.3:73109519-73109538	MS.gene91296:CDS	40.0%
	GTTCTTTGGCTACTTGTGAA+GGG	+	chr1.3:73109798-73109817	MS.gene91296:CDS	40.0%
	TACTTGTGAAGGGATGCTTA+CGG	+	chr1.3:73109808-73109827	MS.gene91296:CDS	40.0%
	TCCTCAAAGATGATGTGTCA+GGG	-	chr1.3:73110144-73110163	None:intergenic	40.0%
	TCTTTAGATCCAAGGTTTCG+GGG	-	chr1.3:73109866-73109885	None:intergenic	40.0%
	TTCTGTTGAAGATGGAGAAG+AGG	+	chr1.3:73109955-73109974	MS.gene91296:CDS	40.0%
	TTTGCAGAACTTCTATGAGG+TGG	-	chr1.3:73109677-73109696	None:intergenic	40.0%
!	ATCATCTTTGAGGAGTCGTT+TGG	+	chr1.3:73110150-73110169	MS.gene91296:CDS	40.0%
!	CAATGGATTCTTATCTGAGG+AGG	+	chr1.3:73110236-73110255	MS.gene91296:CDS	40.0%
!	GGTTAGTTCAAAGATCAGCA+AGG	+	chr1.3:73109547-73109566	MS.gene91296:CDS	40.0%
!!	AAGGTTGGTAATGAGAAAGC+TGG	+	chr1.3:73109497-73109516	MS.gene91296:CDS	40.0%
!!	CCTCCTATTTCTGTTGAAGA+TGG	+	chr1.3:73109947-73109966	MS.gene91296:CDS	40.0%
	ACCAGATGATAAACCCGTAG+AGG	-	chr1.3:73110272-73110291	None:intergenic	45.0%
	ACGTCCATAACCAGAGTTCA+TGG	-	chr1.3:73110053-73110072	None:intergenic	45.0%
	ACTTGTGAAGGGATGCTTAC+GGG	+	chr1.3:73109809-73109828	MS.gene91296:CDS	45.0%
	ATCTTCTTGCGCATCTCTCT+TGG	+	chr1.3:73110390-73110409	MS.gene91296:CDS	45.0%
	CAATCTGGTCCAAGAACTTG+TGG	-	chr1.3:73110442-73110461	None:intergenic	45.0%
	CACAAGTTCTTGGACCAGAT+TGG	+	chr1.3:73110440-73110459	MS.gene91296:CDS	45.0%
	CGAGAAACCTGTTTCAGCAA+TGG	+	chr1.3:73110112-73110131	MS.gene91296:CDS	45.0%
	CTCCTCAAAGATGATGTGTC+AGG	-	chr1.3:73110145-73110164	None:intergenic	45.0%
	CTTGGGATATCCATGAACTC+TGG	+	chr1.3:73110040-73110059	MS.gene91296:CDS	45.0%
	CTTTGATCAGCTTGGGAAGT+TGG	+	chr1.3:73109526-73109545	MS.gene91296:CDS	45.0%
	GAGTTCATGGATATCCCAAG+AGG	-	chr1.3:73110040-73110059	None:intergenic	45.0%
	GCAACAGAACTGAATTCCCT+TGG	+	chr1.3:73109917-73109936	MS.gene91296:CDS	45.0%
	GGAGCAAAAGTTGAAGAAGG+AGG	+	chr1.3:73110171-73110190	MS.gene91296:CDS	45.0%
	GGATTCTTATCTGAGGAGGT+TGG	+	chr1.3:73110240-73110259	MS.gene91296:CDS	45.0%
	GGTACGTACTTTGATCAGCT+TGG	+	chr1.3:73109518-73109537	MS.gene91296:CDS	45.0%
	GGTTCTTTGGCTACTTGTGA+AGG	+	chr1.3:73109797-73109816	MS.gene91296:CDS	45.0%
	GTTCATGGATATCCCAAGAG+GGG	-	chr1.3:73110038-73110057	None:intergenic	45.0%
	TCCCTGACACATCATCTTTG+AGG	+	chr1.3:73110140-73110159	MS.gene91296:CDS	45.0%
	TCCTCTACGGGTTTATCATC+TGG	+	chr1.3:73110268-73110287	MS.gene91296:CDS	45.0%
	TTGCTGAAACAGGTTTCTCG+AGG	-	chr1.3:73110112-73110131	None:intergenic	45.0%
!	AGGTTGGTTGAATCCTCTAC+GGG	+	chr1.3:73110256-73110275	MS.gene91296:CDS	45.0%
!	CTTGGATTTTCGCGTTGCAA+TGG	+	chr1.3:73110408-73110427	MS.gene91296:CDS	45.0%
!	GAGGTTGGTTGAATCCTCTA+CGG	+	chr1.3:73110255-73110274	MS.gene91296:CDS	45.0%
	AAATAGGAGGTCTGCTGCCA+AGG	-	chr1.3:73109937-73109956	None:intergenic	50.0%
	AATAGGAGGTCTGCTGCCAA+GGG	-	chr1.3:73109936-73109955	None:intergenic	50.0%
	GAAGAGGTTGAACAGCTTGG+TGG	+	chr1.3:73109971-73109990	MS.gene91296:CDS	50.0%
	GGAGAAGAGGTTGAACAGCT+TGG	+	chr1.3:73109968-73109987	MS.gene91296:CDS	50.0%
	TTGCATCACGACGATTGGGA+AGG	+	chr1.3:73109586-73109605	MS.gene91296:CDS	50.0%
!!	GAGCACCGAAGACAAGGAAA+TGG	+	chr1.3:73110307-73110326	MS.gene91296:CDS	50.0%
!!	GGAAATGAGCACCGAAGACA+AGG	+	chr1.3:73110301-73110320	MS.gene91296:CDS	50.0%
!!	GGAGTGCTTTGGGACAGTTA+GGG	+	chr1.3:73109837-73109856	MS.gene91296:CDS	50.0%
	AAGGGATGCTTACGGGTCGT+CGG	+	chr1.3:73109816-73109835	MS.gene91296:CDS	55.0%
	GGAGGGTTTAACCGTGACAG+TGG	+	chr1.3:73110189-73110208	MS.gene91296:CDS	55.0%
	TCAAGCTGTGTGGGCCAATC+TGG	-	chr1.3:73110457-73110476	None:intergenic	55.0%
	TCTGTTGCACTCTGCTGCTC+TGG	-	chr1.3:73109905-73109924	None:intergenic	55.0%
	TTAGGGAAGCCCCGAAACCT+TGG	+	chr1.3:73109854-73109873	MS.gene91296:CDS	55.0%
!!	CGGAGTGCTTTGGGACAGTT+AGG	+	chr1.3:73109836-73109855	MS.gene91296:CDS	55.0%
	AGTCCTGTTGCAGCCCCTCT+TGG	+	chr1.3:73110022-73110041	MS.gene91296:CDS	60.0%
	ATCCCAAGAGGGGCTGCAAC+AGG	-	chr1.3:73110028-73110047	None:intergenic	60.0%
	CAAAGAACCACCCCTGCGCA+GGG	-	chr1.3:73109786-73109805	None:intergenic	60.0%
	CTTTCCTCCTTCCCTGCGCA+GGG	+	chr1.3:73109772-73109791	MS.gene91296:CDS	60.0%
	GTCCTGTTGCAGCCCCTCTT+GGG	+	chr1.3:73110023-73110042	MS.gene91296:CDS	60.0%
	TTTCCTCCTTCCCTGCGCAG+GGG	+	chr1.3:73109773-73109792	MS.gene91296:CDS	60.0%
!	ACGGGTCGTCGGAGTGCTTT+GGG	+	chr1.3:73109827-73109846	MS.gene91296:CDS	60.0%
!	TACGGGTCGTCGGAGTGCTT+TGG	+	chr1.3:73109826-73109845	MS.gene91296:CDS	60.0%
	CCAAAGAACCACCCCTGCGC+AGG	-	chr1.3:73109787-73109806	None:intergenic	65.0%
	CCTGCGCAGGGAAGGAGGAA+AGG	-	chr1.3:73109774-73109793	None:intergenic	65.0%
	CCTGCGCAGGGGTGGTTCTT+TGG	+	chr1.3:73109784-73109803	MS.gene91296:CDS	65.0%
	CCTTTCCTCCTTCCCTGCGC+AGG	+	chr1.3:73109771-73109790	MS.gene91296:CDS	65.0%
	GAACCACCCCTGCGCAGGGA+AGG	-	chr1.3:73109782-73109801	None:intergenic	70.0%
	CCACCCCTGCGCAGGGAAGG+AGG	-	chr1.3:73109779-73109798	None:intergenic	75.0%
	CCTCCTTCCCTGCGCAGGGG+TGG	+	chr1.3:73109776-73109795	MS.gene91296:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	73109431	73110507	73109431	ID=MS.gene91296
chr1.3	mRNA	73109431	73110507	73109431	ID=MS.gene91296.t1;Parent=MS.gene91296
chr1.3	exon	73109431	73110507	73109431	ID=MS.gene91296.t1.exon1;Parent=MS.gene91296.t1
chr1.3	CDS	73109431	73110507	73109431	ID=cds.MS.gene91296.t1;Parent=MS.gene91296.t1

Gene Sequence

>MS.gene91296

ATGACGGTACCAAAGCAAAACTATACTCGAATAAACACTTTGGAGCTGAAAGCTGTTATTGTAAAGAAGGTTGGTAATGAGAAAGCTGGTACGTACTTTGATCAGCTTGGGAAGTTGGTTAGTTCAAAGATCAGCAAGGCTGAGTTTGACAAGATTTGCATCACGACGATTGGGAAGGAAAATGTTCCTCTTCATAATCAACTCATTAGGGCAATTCTGAAGAATGTTTGTTTGTCTAAAGTTCCACCTCATAGAAGTTCTGCAAAAAAAGAGAGGGTCTTGAATGCAAAAGATTCAAATCGGCAGCAGAGCAGATCAATTCAAATGCAGTACGGGGATGCCTTTCCTCCTTCCCTGCGCAGGGGTGGTTCTTTGGCTACTTGTGAAGGGATGCTTACGGGTCGTCGGAGTGCTTTGGGACAGTTAGGGAAGCCCCGAAACCTTGGATCTAAAGATTTGATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGCAGACCTCCTATTTCTGTTGAAGATGGAGAAGAGGTTGAACAGCTTGGTGGAAGCCCAAGCTCAAGCATTCAAAGTAAGAGTCCTGTTGCAGCCCCTCTTGGGATATCCATGAACTCTGGTTATGGACGTAGTCCTCTTTCTTTTGCATCATCATGCAGAAAGCATCCTCGAGAAACCTGTTTCAGCAATGGATATCTCCCTGACACATCATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGAAGAAGGAGGGTTTAACCGTGACAGTGGATTGTGTAAATCTATTGAATAATGCAATGGATTCTTATCTGAGGAGGTTGGTTGAATCCTCTACGGGTTTATCATCTGGTTTAAGATTCGGAAATGAGCACCGAAGACAAGGAAATGGACAGTCAATAGCTGATTCAACTATACTGCAACCCAGAATGTATATGCAAACAGCAACACAATCTTCTTGCGCATCTCTCTTGGATTTTCGCGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTAATGAATGA

Protein sequence

>MS.gene91296.t1

MTVPKQNYTRINTLELKAVIVKKVGNEKAGTYFDQLGKLVSSKISKAEFDKICITTIGKENVPLHNQLIRAILKNVCLSKVPPHRSSAKKERVLNAKDSNRQQSRSIQMQYGDAFPPSLRRGGSLATCEGMLTGRRSALGQLGKPRNLGSKDLIYKTPEQQSATELNSLGSRPPISVEDGEEVEQLGGSPSSSIQSKSPVAAPLGISMNSGYGRSPLSFASSCRKHPRETCFSNGYLPDTSSLRSRLEQKLKKEGLTVTVDCVNLLNNAMDSYLRRLVESSTGLSSGLRFGNEHRRQGNGQSIADSTILQPRMYMQTATQSSCASLLDFRVAMELNPQVLGPDWPTQLEKICIRASNE