Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44446.t1 | XP_003608551.2 | 90.2 | 489 | 46 | 1 | 26 | 514 | 4 | 490 | 2.30E-254 | 887.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44446.t1 | Q9FHP1 | 47.8 | 483 | 234 | 9 | 41 | 512 | 2 | 477 | 5.7e-113 | 409.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44446.t1 | G7JF79 | 90.2 | 489 | 46 | 1 | 26 | 514 | 4 | 490 | 1.6e-254 | 887.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060861 | MS.gene44446 | 0.93695 | 7.63E-98 | -1.69E-46 |
| MS.gene060864 | MS.gene44446 | 0.937391 | 3.74E-98 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33646 | MS.gene44446 | PPI |
| MS.gene026670 | MS.gene44446 | PPI |
| MS.gene93159 | MS.gene44446 | PPI |
| MS.gene31860 | MS.gene44446 | PPI |
| MS.gene013709 | MS.gene44446 | PPI |
| MS.gene44446 | MS.gene02506 | PPI |
| MS.gene44446 | MS.gene052926 | PPI |
| MS.gene44446 | MS.gene02630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44446.t1 | MTR_4g097380 | 90.184 | 489 | 46 | 1 | 26 | 514 | 4 | 490 | 0.0 | 895 |
| MS.gene44446.t1 | MTR_5g015170 | 52.642 | 492 | 209 | 6 | 41 | 514 | 1 | 486 | 5.76e-178 | 509 |
| MS.gene44446.t1 | MTR_3g088885 | 42.280 | 421 | 230 | 6 | 48 | 467 | 7 | 415 | 2.76e-112 | 340 |
| MS.gene44446.t1 | MTR_7g028050 | 40.257 | 467 | 250 | 7 | 50 | 514 | 1 | 440 | 4.78e-109 | 332 |
| MS.gene44446.t1 | MTR_5g047260 | 42.070 | 454 | 230 | 11 | 36 | 481 | 2 | 430 | 3.43e-108 | 330 |
| MS.gene44446.t1 | MTR_1g029520 | 40.000 | 435 | 249 | 5 | 66 | 498 | 254 | 678 | 2.61e-103 | 325 |
| MS.gene44446.t1 | MTR_7g022470 | 38.280 | 465 | 262 | 7 | 50 | 514 | 10 | 449 | 2.50e-102 | 315 |
| MS.gene44446.t1 | MTR_5g011580 | 39.048 | 420 | 225 | 7 | 46 | 464 | 2 | 391 | 5.27e-94 | 293 |
| MS.gene44446.t1 | MTR_4g101950 | 39.024 | 410 | 221 | 5 | 53 | 462 | 9 | 389 | 3.14e-92 | 288 |
| MS.gene44446.t1 | MTR_5g047260 | 42.408 | 382 | 185 | 11 | 36 | 407 | 2 | 358 | 1.08e-87 | 274 |
| MS.gene44446.t1 | MTR_5g047260 | 42.900 | 331 | 161 | 9 | 36 | 361 | 2 | 309 | 2.19e-79 | 251 |
| MS.gene44446.t1 | MTR_7g028050 | 38.682 | 349 | 194 | 5 | 166 | 514 | 9 | 337 | 6.68e-72 | 232 |
| MS.gene44446.t1 | MTR_1g012740 | 41.509 | 106 | 53 | 4 | 41 | 140 | 1 | 103 | 3.44e-15 | 73.9 |
| MS.gene44446.t1 | MTR_1g012740 | 37.755 | 98 | 53 | 2 | 328 | 425 | 54 | 143 | 1.95e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44446.t1 | AT5G65890 | 47.826 | 483 | 234 | 9 | 41 | 512 | 2 | 477 | 3.04e-142 | 418 |
| MS.gene44446.t1 | AT5G65890 | 47.826 | 483 | 234 | 9 | 41 | 512 | 2 | 477 | 3.04e-142 | 418 |
| MS.gene44446.t1 | AT1G76990 | 43.448 | 435 | 217 | 7 | 41 | 467 | 1 | 414 | 1.23e-116 | 352 |
| MS.gene44446.t1 | AT1G76990 | 43.448 | 435 | 217 | 7 | 41 | 467 | 1 | 414 | 1.23e-116 | 352 |
| MS.gene44446.t1 | AT1G76990 | 43.448 | 435 | 217 | 7 | 41 | 467 | 1 | 414 | 1.23e-116 | 352 |
| MS.gene44446.t1 | AT1G76990 | 43.448 | 435 | 217 | 7 | 41 | 467 | 1 | 414 | 1.23e-116 | 352 |
| MS.gene44446.t1 | AT1G76990 | 43.448 | 435 | 217 | 7 | 41 | 467 | 1 | 414 | 1.23e-116 | 352 |
| MS.gene44446.t1 | AT5G65890 | 45.602 | 432 | 216 | 8 | 93 | 512 | 1 | 425 | 1.25e-115 | 348 |
| MS.gene44446.t1 | AT5G65890 | 45.602 | 432 | 216 | 8 | 93 | 512 | 1 | 425 | 1.25e-115 | 348 |
| MS.gene44446.t1 | AT1G69040 | 41.151 | 469 | 246 | 10 | 50 | 514 | 7 | 449 | 6.47e-109 | 332 |
| MS.gene44446.t1 | AT1G69040 | 40.710 | 479 | 253 | 11 | 40 | 514 | 2 | 453 | 7.24e-109 | 332 |
| MS.gene44446.t1 | AT5G25320 | 39.357 | 498 | 266 | 10 | 48 | 513 | 7 | 500 | 1.51e-108 | 332 |
| MS.gene44446.t1 | AT2G03730 | 39.323 | 473 | 254 | 10 | 49 | 514 | 10 | 456 | 7.77e-102 | 314 |
| MS.gene44446.t1 | AT2G03730 | 39.323 | 473 | 254 | 10 | 49 | 514 | 10 | 456 | 7.77e-102 | 314 |
| MS.gene44446.t1 | AT3G01990 | 41.346 | 416 | 219 | 7 | 51 | 464 | 3 | 395 | 1.16e-98 | 305 |
| MS.gene44446.t1 | AT3G01990 | 41.346 | 416 | 219 | 7 | 51 | 464 | 3 | 395 | 1.16e-98 | 305 |
| MS.gene44446.t1 | AT3G01990 | 41.247 | 417 | 218 | 7 | 51 | 464 | 17 | 409 | 1.35e-98 | 305 |
| MS.gene44446.t1 | AT3G01990 | 41.247 | 417 | 218 | 7 | 51 | 464 | 17 | 409 | 1.35e-98 | 305 |
| MS.gene44446.t1 | AT4G22780 | 42.029 | 414 | 203 | 7 | 53 | 462 | 9 | 389 | 1.36e-98 | 305 |
| MS.gene44446.t1 | AT4G22780 | 42.029 | 414 | 203 | 7 | 53 | 462 | 9 | 389 | 1.36e-98 | 305 |
| MS.gene44446.t1 | AT3G01990 | 41.346 | 416 | 219 | 7 | 51 | 464 | 3 | 395 | 1.57e-98 | 304 |
| MS.gene44446.t1 | AT3G01990 | 41.346 | 416 | 219 | 7 | 51 | 464 | 17 | 409 | 1.76e-98 | 305 |
| MS.gene44446.t1 | AT1G12420 | 38.578 | 464 | 250 | 7 | 53 | 514 | 9 | 439 | 7.83e-98 | 303 |
| MS.gene44446.t1 | AT5G25320 | 38.280 | 465 | 253 | 9 | 79 | 513 | 1 | 461 | 8.35e-97 | 301 |
| MS.gene44446.t1 | AT5G65890 | 44.857 | 350 | 182 | 6 | 170 | 512 | 18 | 363 | 4.53e-90 | 280 |
| MS.gene44446.t1 | AT5G25320 | 42.935 | 368 | 182 | 8 | 48 | 391 | 7 | 370 | 2.24e-84 | 266 |
| MS.gene44446.t1 | AT3G01990 | 41.499 | 347 | 176 | 7 | 51 | 394 | 17 | 339 | 4.17e-78 | 248 |
| MS.gene44446.t1 | AT3G01990 | 41.499 | 347 | 176 | 7 | 51 | 394 | 17 | 339 | 5.86e-78 | 248 |
| MS.gene44446.t1 | AT3G01990 | 41.499 | 347 | 176 | 7 | 51 | 394 | 3 | 325 | 6.27e-78 | 248 |
| MS.gene44446.t1 | AT1G12420 | 35.750 | 400 | 222 | 7 | 117 | 514 | 1 | 367 | 7.95e-72 | 233 |
| MS.gene44446.t1 | AT3G01990 | 41.290 | 310 | 157 | 6 | 51 | 357 | 17 | 304 | 1.54e-68 | 223 |
| MS.gene44446.t1 | AT3G01990 | 41.290 | 310 | 157 | 6 | 51 | 357 | 3 | 290 | 2.05e-68 | 222 |
Find 134 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCACAATTCTCTTTATA+TGG | 0.213801 | 8.1:+25226773 | MS.gene44446:CDS |
| TGCAATGTTGCAGGGATTAA+AGG | 0.229472 | 8.1:+25226542 | MS.gene44446:intron |
| AGCGTCTCATCAACAATTTC+AGG | 0.251482 | 8.1:+25226880 | MS.gene44446:CDS |
| TTTCTCTCCCCTTCCTTCAT+TGG | 0.266843 | 8.1:-25225439 | None:intergenic |
| CCATTGTTTCGTAGAGGATA+TGG | 0.274112 | 8.1:+25224253 | MS.gene44446:CDS |
| TTCTGATGGCGGATGGTTAA+TGG | 0.291811 | 8.1:+25224745 | MS.gene44446:CDS |
| GCTTCTGATTAAGATCTAAT+TGG | 0.298334 | 8.1:-25226903 | None:intergenic |
| ATCAGAAGAAATGTATGATT+TGG | 0.303876 | 8.1:-25224729 | None:intergenic |
| TTACACAGGAGTACTTTATA+AGG | 0.327789 | 8.1:+25226283 | MS.gene44446:intron |
| TCTATAACAAGAATTGAGTT+TGG | 0.333688 | 8.1:+25226636 | MS.gene44446:CDS |
| TTGCTATTGGAAGCATGATT+TGG | 0.335740 | 8.1:+25226847 | MS.gene44446:CDS |
| GATACGAGGGGCGAGATTAC+TGG | 0.336479 | 8.1:+25225634 | MS.gene44446:CDS |
| AACATCTCTACTATTGTTAC+TGG | 0.356942 | 8.1:-25226814 | None:intergenic |
| ATCGTTGATTGGCCCAGGTC+TGG | 0.363632 | 8.1:-25225367 | None:intergenic |
| TTCTATGTTACAGATTGTTC+AGG | 0.369312 | 8.1:+25226687 | MS.gene44446:CDS |
| AATTGGTGGTTCAGTTGCTT+TGG | 0.375279 | 8.1:+25226752 | MS.gene44446:CDS |
| GCAGCTATGGAATCTTTGTT+AGG | 0.380890 | 8.1:+25224180 | MS.gene44446:CDS |
| CATTGGCCTCTATCACATTC+CGG | 0.382607 | 8.1:-25225422 | None:intergenic |
| CATGCCTGCCACGGGGATAA+TGG | 0.385693 | 8.1:+25225564 | MS.gene44446:CDS |
| TTCTGCCATGGGGCTGTTTG+AGG | 0.387039 | 8.1:-25225754 | None:intergenic |
| ATCCGTTCCTATCACCTCTA+TGG | 0.404945 | 8.1:-25225223 | None:intergenic |
| CACCGGCTGCGTACATCATC+TGG | 0.407191 | 8.1:-25225527 | None:intergenic |
| AGAGATATCAGTGGTACTAA+TGG | 0.411256 | 8.1:+25225263 | MS.gene44446:CDS |
| AATCGCTCTCTATCGTTGAT+TGG | 0.426266 | 8.1:-25225378 | None:intergenic |
| TGTATGATTTGGAAATTGTA+AGG | 0.426999 | 8.1:-25224718 | None:intergenic |
| AAACAGCCCCATGGCAGAAC+AGG | 0.434204 | 8.1:+25225758 | MS.gene44446:CDS |
| ATTAGCACTCAAAACAAAAC+GGG | 0.440329 | 8.1:+25226570 | MS.gene44446:CDS |
| TATAGCAGCGATTAAACATA+AGG | 0.449093 | 8.1:-25226361 | None:intergenic |
| TGTTACAGATTGTTCAGGTC+AGG | 0.451595 | 8.1:+25226692 | MS.gene44446:CDS |
| AAATCATACATTTCTTCTGA+TGG | 0.460360 | 8.1:+25224731 | MS.gene44446:CDS |
| TGGAGTACCTGTTCTGCCAT+GGG | 0.465527 | 8.1:-25225765 | None:intergenic |
| GAGCACAAAAGGCGGTATGA+TGG | 0.467835 | 8.1:+25225591 | MS.gene44446:CDS |
| AACTTTGTCATGATGGGTCC+AGG | 0.467895 | 8.1:-25225316 | None:intergenic |
| CGTATCTATCCACTGAAACA+TGG | 0.468562 | 8.1:-25225617 | None:intergenic |
| ATCAGTGGTACTAATGGACT+TGG | 0.469012 | 8.1:+25225269 | MS.gene44446:CDS |
| ACCGCCATTATCCCCGTGGC+AGG | 0.470635 | 8.1:-25225568 | None:intergenic |
| ATGGCAACATTTGCTTCTTG+TGG | 0.473553 | 8.1:-25225204 | None:intergenic |
| CCAGGTCTGGATGCATCCTC+CGG | 0.476009 | 8.1:-25225354 | None:intergenic |
| CCGGAGGATGCATCCAGACC+TGG | 0.479668 | 8.1:+25225354 | MS.gene44446:CDS |
| ATAATGGCGGTGAGCACAAA+AGG | 0.480235 | 8.1:+25225580 | MS.gene44446:CDS |
| TTCCATGTGAAGGATCAGAT+AGG | 0.483105 | 8.1:+25224853 | MS.gene44446:CDS |
| GAAGGGGAGAGAAAGATATG+AGG | 0.483444 | 8.1:+25225448 | MS.gene44446:CDS |
| GGTCTAGATCTGTCAACGTC+TGG | 0.484026 | 8.1:-25224697 | None:intergenic |
| TCCGGATCTGATCCACGACT+TGG | 0.485359 | 8.1:-25225404 | None:intergenic |
| AGCACAAAAGGCGGTATGAT+GGG | 0.485604 | 8.1:+25225592 | MS.gene44446:CDS |
| CCCAAGTCGTGGATCAGATC+CGG | 0.485712 | 8.1:+25225403 | MS.gene44446:CDS |
| AGTTGCATGCATTATCTATC+CGG | 0.496145 | 8.1:+25225335 | MS.gene44446:CDS |
| TCTCTATCGTTGATTGGCCC+AGG | 0.496551 | 8.1:-25225372 | None:intergenic |
| TGCATGCAACTTTGTCATGA+TGG | 0.497131 | 8.1:-25225323 | None:intergenic |
| ACAATATCAAACAACAACTT+AGG | 0.497406 | 8.1:-25225684 | None:intergenic |
| CATTAGCACTCAAAACAAAA+CGG | 0.498818 | 8.1:+25226569 | MS.gene44446:CDS |
| GATATCTCTGAAAACAAGCC+AGG | 0.502489 | 8.1:-25225249 | None:intergenic |
| GGTATGACTGTGACCGGTGG+TGG | 0.502522 | 8.1:-25225490 | None:intergenic |
| AAGAATTGAGTTTGGAGTAG+AGG | 0.506027 | 8.1:+25226644 | MS.gene44446:CDS |
| AAACACACATGGGATACTAT+TGG | 0.508487 | 8.1:+25224667 | MS.gene44446:CDS |
| AGAGTTGTCATGCCTGCCAC+GGG | 0.509705 | 8.1:+25225556 | MS.gene44446:CDS |
| GGTCGGTGAATGTGAGAAGC+CGG | 0.511766 | 8.1:+25225655 | MS.gene44446:CDS |
| CTGGAGTACCTGTTCTGCCA+TGG | 0.511849 | 8.1:-25225766 | None:intergenic |
| CTCTATCGATGTGAGGCTGC+TGG | 0.518271 | 8.1:-25224286 | None:intergenic |
| CCGTTCGGTATGACTGTGAC+CGG | 0.520048 | 8.1:-25225496 | None:intergenic |
| ACATCATATCTGCAAAAGCC+TGG | 0.524651 | 8.1:+25225298 | MS.gene44446:CDS |
| GTTTCTGAACTATGCAGCTA+TGG | 0.525263 | 8.1:+25224167 | MS.gene44446:CDS |
| GTATCTATCCACTGAAACAT+GGG | 0.527029 | 8.1:-25225616 | None:intergenic |
| GATTATATTTAGAACTACCT+TGG | 0.527210 | 8.1:-25226308 | None:intergenic |
| CATCTGGTGGAGCCTCCGTT+CGG | 0.533464 | 8.1:-25225511 | None:intergenic |
| ATGCTTCCAATAGCAAAAGT+TGG | 0.535215 | 8.1:-25226840 | None:intergenic |
| GTAGAGGATGAAACAGCAAT+AGG | 0.536431 | 8.1:+25226660 | MS.gene44446:CDS |
| ACACGCGTAATTCATGAGAA+TGG | 0.538292 | 8.1:+25226609 | MS.gene44446:CDS |
| TCAGATCCGGAATGTGATAG+AGG | 0.538363 | 8.1:+25225416 | MS.gene44446:CDS |
| ACATTTCTTCTGATGGCGGA+TGG | 0.545160 | 8.1:+25224738 | MS.gene44446:CDS |
| AGAAGCAAATGTTGCCATAG+AGG | 0.545216 | 8.1:+25225209 | MS.gene44446:CDS |
| CAGAAACTGCACGGTGGTGA+AGG | 0.545407 | 8.1:+25224530 | MS.gene44446:CDS |
| GCTCACAGACATGCAATATG+AGG | 0.545413 | 8.1:+25225713 | MS.gene44446:CDS |
| CACCAGATGATGTACGCAGC+CGG | 0.553985 | 8.1:+25225525 | MS.gene44446:CDS |
| TCCATGTGAAGGATCAGATA+GGG | 0.556332 | 8.1:+25224854 | MS.gene44446:CDS |
| GTCGGTGAATGTGAGAAGCC+GGG | 0.557556 | 8.1:+25225656 | MS.gene44446:CDS |
| AATGTTGCCATAGAGGTGAT+AGG | 0.562183 | 8.1:+25225216 | MS.gene44446:CDS |
| TCTCGTGAATCACATTGAGC+AGG | 0.562429 | 8.1:+25224897 | MS.gene44446:CDS |
| TGATAGAGGCCAATGAAGGA+AGG | 0.566933 | 8.1:+25225430 | MS.gene44446:CDS |
| TAGTATAGTACCTAGGTGGA+TGG | 0.567313 | 8.1:-25224334 | None:intergenic |
| AACAGTGCAACACTGTTGCA+AGG | 0.570985 | 8.1:+25225179 | MS.gene44446:CDS |
| TCCCTATCTGATCCTTCACA+TGG | 0.579315 | 8.1:-25224855 | None:intergenic |
| CGGAGGATGCATCCAGACCT+GGG | 0.580119 | 8.1:+25225355 | MS.gene44446:CDS |
| ACAACAACTTAGGACGATCC+CGG | 0.582160 | 8.1:-25225674 | None:intergenic |
| GAGAGTTGTCATGCCTGCCA+CGG | 0.582444 | 8.1:+25225555 | MS.gene44446:CDS |
| GTGATAGGAACGGATCAACC+TGG | 0.590820 | 8.1:+25225231 | MS.gene44446:CDS |
| CGGCTGCGTACATCATCTGG+TGG | 0.590925 | 8.1:-25225524 | None:intergenic |
| ATAGAGGCCAATGAAGGAAG+GGG | 0.594093 | 8.1:+25225432 | MS.gene44446:CDS |
| GCATGCAACTTTGTCATGAT+GGG | 0.595221 | 8.1:-25225322 | None:intergenic |
| CCGGATCTGATCCACGACTT+GGG | 0.597922 | 8.1:-25225403 | None:intergenic |
| TCATACATTTCTTCTGATGG+CGG | 0.599693 | 8.1:+25224734 | MS.gene44446:CDS |
| AATGTGATAGAGGCCAATGA+AGG | 0.600130 | 8.1:+25225426 | MS.gene44446:CDS |
| TGATGGGGCCCATGTTTCAG+TGG | 0.600905 | 8.1:+25225608 | MS.gene44446:CDS |
| GTTGAACCATTGTTTCGTAG+AGG | 0.602637 | 8.1:+25224247 | MS.gene44446:CDS |
| GATAGAGGCCAATGAAGGAA+GGG | 0.603133 | 8.1:+25225431 | MS.gene44446:CDS |
| ATTATCAGCCAACAAAACTC+AGG | 0.608881 | 8.1:+25224225 | MS.gene44446:CDS |
| ATTGATAGAGCAAACACACA+TGG | 0.612436 | 8.1:+25224656 | MS.gene44446:CDS |
| ACATGGGATACTATTGGAGA+TGG | 0.616958 | 8.1:+25224673 | MS.gene44446:CDS |
| CCATATCCTCTACGAAACAA+TGG | 0.621848 | 8.1:-25224253 | None:intergenic |
| ACAGTGCAACACTGTTGCAA+GGG | 0.628413 | 8.1:+25225180 | MS.gene44446:CDS |
| GCACAAAAGGCGGTATGATG+GGG | 0.631001 | 8.1:+25225593 | MS.gene44446:CDS |
| GATAATCGATGACTGATGCA+TGG | 0.633541 | 8.1:-25224208 | None:intergenic |
| GCCTGCCACGGGGATAATGG+CGG | 0.633723 | 8.1:+25225567 | MS.gene44446:CDS |
| AGAGCGATTAGCCCAAGTCG+TGG | 0.638739 | 8.1:+25225392 | MS.gene44446:CDS |
| ACAACAAAACCGAAAAGCAA+AGG | 0.638898 | 8.1:+25226334 | MS.gene44446:CDS |
| AAGAAAGAATCCATCCACCT+AGG | 0.641830 | 8.1:+25224324 | MS.gene44446:CDS |
| TGCCATAGAGGTGATAGGAA+CGG | 0.641917 | 8.1:+25225221 | MS.gene44446:CDS |
| GTTTCAGTGGATAGATACGA+GGG | 0.644538 | 8.1:+25225621 | MS.gene44446:CDS |
| TGATTCATGCAGAAACTGCA+CGG | 0.646213 | 8.1:+25224521 | MS.gene44446:CDS |
| TCAGTGGTACTAATGGACTT+GGG | 0.647191 | 8.1:+25225270 | MS.gene44446:CDS |
| GGAGTACCTGTTCTGCCATG+GGG | 0.647486 | 8.1:-25225764 | None:intergenic |
| TCAATTTCTCTATCGATGTG+AGG | 0.653378 | 8.1:-25224293 | None:intergenic |
| TTGATAGAGCAAACACACAT+GGG | 0.653467 | 8.1:+25224657 | MS.gene44446:CDS |
| ATGACAACTCTCGTAGTCAC+CGG | 0.657396 | 8.1:-25225544 | None:intergenic |
| TGTTACCTCAAACAGCCCCA+TGG | 0.664469 | 8.1:+25225749 | MS.gene44446:CDS |
| TGCATGCATTATCTATCCGG+AGG | 0.669422 | 8.1:+25225338 | MS.gene44446:CDS |
| TGTTTCAGTGGATAGATACG+AGG | 0.681409 | 8.1:+25225620 | MS.gene44446:CDS |
| GAGTACTTTATAAGGAACCA+AGG | 0.682714 | 8.1:+25226291 | MS.gene44446:CDS |
| CCGGTCACAGTCATACCGAA+CGG | 0.683868 | 8.1:+25225496 | MS.gene44446:CDS |
| AACTTAGTATAGTACCTAGG+TGG | 0.691109 | 8.1:-25224338 | None:intergenic |
| CAAAACGGGGATACTATCGA+AGG | 0.692191 | 8.1:+25226584 | MS.gene44446:CDS |
| ATGGCGGTGAGCACAAAAGG+CGG | 0.698927 | 8.1:+25225583 | MS.gene44446:CDS |
| ACTATTGTTACTGGATGACG+AGG | 0.699074 | 8.1:-25226805 | None:intergenic |
| TTCGGTATGACTGTGACCGG+TGG | 0.700481 | 8.1:-25225493 | None:intergenic |
| GCTCACCGCCATTATCCCCG+TGG | 0.702272 | 8.1:-25225572 | None:intergenic |
| GTCACAGTCATACCGAACGG+AGG | 0.707524 | 8.1:+25225499 | MS.gene44446:CDS |
| AATTGTTGATGAGACGCTCG+AGG | 0.729605 | 8.1:-25226875 | None:intergenic |
| GCAATATGAGGTGTTTCATG+CGG | 0.731122 | 8.1:+25225725 | MS.gene44446:CDS |
| GATGGCGGATGGTTAATGGA+TGG | 0.732506 | 8.1:+25224749 | MS.gene44446:CDS |
| TTAGCACTCAAAACAAAACG+GGG | 0.740475 | 8.1:+25226571 | MS.gene44446:CDS |
| TTTCAGTGGATAGATACGAG+GGG | 0.743621 | 8.1:+25225622 | MS.gene44446:CDS |
| CGAGGGGCGAGATTACTGGT+CGG | 0.745864 | 8.1:+25225638 | MS.gene44446:CDS |
| GAGTTGTCATGCCTGCCACG+GGG | 0.748483 | 8.1:+25225557 | MS.gene44446:CDS |
| TTCATGCAGAAACTGCACGG+TGG | 0.839251 | 8.1:+25224524 | MS.gene44446:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAATTGAAAAATC+TGG | - | chr8.1:25225788-25225807 | None:intergenic | 10.0% |
| !! | AATTAAGTAAAGTTAAATTA+AGG | - | chr8.1:25224576-25224595 | None:intergenic | 10.0% |
| !! | AATACTCTAATTTAAAAACA+GGG | - | chr8.1:25226244-25226263 | None:intergenic | 15.0% |
| !! | ATCAAAACCTAATTTAAATA+TGG | - | chr8.1:25226050-25226069 | None:intergenic | 15.0% |
| !! | GTTAAGATTAATAATAGTAT+CGG | - | chr8.1:25226472-25226491 | None:intergenic | 15.0% |
| !!! | ATGATGATGAATTAATATTT+TGG | - | chr8.1:25226119-25226138 | None:intergenic | 15.0% |
| !!! | TTTTCAATTAATTATTTGCA+AGG | + | chr8.1:25225791-25225810 | MS.gene44446:intron | 15.0% |
| !! | AAAAAAAGTAACCAAGTTAT+TGG | + | chr8.1:25225943-25225962 | MS.gene44446:intron | 20.0% |
| !! | AAACCTAATTTAAATATGGT+TGG | - | chr8.1:25226046-25226065 | None:intergenic | 20.0% |
| !! | AACCTAATTTAAATATGGTT+GGG | - | chr8.1:25226045-25226064 | None:intergenic | 20.0% |
| !! | ATACTCTAATTTAAAAACAG+GGG | - | chr8.1:25226243-25226262 | None:intergenic | 20.0% |
| !! | CAATACTCTAATTTAAAAAC+AGG | - | chr8.1:25226245-25226264 | None:intergenic | 20.0% |
| !!! | AAATAGTGCATATCTTTTTT+GGG | - | chr8.1:25224407-25224426 | None:intergenic | 20.0% |
| !!! | GAATAGACTTTAAAATGATA+AGG | + | chr8.1:25225900-25225919 | MS.gene44446:intron | 20.0% |
| !!! | TGCAATTCTAAGATTATTTT+TGG | + | chr8.1:25224819-25224838 | MS.gene44446:intron | 20.0% |
| ! | AAATCATACATTTCTTCTGA+TGG | + | chr8.1:25224731-25224750 | MS.gene44446:CDS | 25.0% |
| ! | ACAATATCAAACAACAACTT+AGG | - | chr8.1:25225687-25225706 | None:intergenic | 25.0% |
| ! | ATATATGAAACAAGAAACAC+GGG | - | chr8.1:25224480-25224499 | None:intergenic | 25.0% |
| ! | ATCACTATTCAATTAATGTG+TGG | + | chr8.1:25225867-25225886 | MS.gene44446:intron | 25.0% |
| ! | ATCAGAAGAAATGTATGATT+TGG | - | chr8.1:25224732-25224751 | None:intergenic | 25.0% |
| ! | CATATATGAAACAAGAAACA+CGG | - | chr8.1:25224481-25224500 | None:intergenic | 25.0% |
| ! | TAATTTAAATATGGTTGGGA+GGG | - | chr8.1:25226041-25226060 | None:intergenic | 25.0% |
| ! | TCTATAACAAGAATTGAGTT+TGG | + | chr8.1:25226636-25226655 | MS.gene44446:CDS | 25.0% |
| ! | TGTACACATTGTTTATATTG+AGG | - | chr8.1:25224794-25224813 | None:intergenic | 25.0% |
| ! | TTAAAGTCTATTCATGTTTG+TGG | - | chr8.1:25225893-25225912 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGAGAAATTGG+TGG | + | chr8.1:25226738-25226757 | MS.gene44446:CDS | 25.0% |
| !! | ATATTGGTGCAATTTTTATG+TGG | + | chr8.1:25225823-25225842 | MS.gene44446:intron | 25.0% |
| !! | GATTATATTTAGAACTACCT+TGG | - | chr8.1:25226311-25226330 | None:intergenic | 25.0% |
| !! | TGTATGATTTGGAAATTGTA+AGG | - | chr8.1:25224721-25224740 | None:intergenic | 25.0% |
| !! | TTGGATTTTTGCATTTACAA+TGG | + | chr8.1:25226439-25226458 | MS.gene44446:intron | 25.0% |
| !!! | CAAATAGTGCATATCTTTTT+TGG | - | chr8.1:25224408-25224427 | None:intergenic | 25.0% |
| !!! | GAGTTGATAAAAAGAGAAAT+TGG | + | chr8.1:25226735-25226754 | MS.gene44446:CDS | 25.0% |
| AACATCTCTACTATTGTTAC+TGG | - | chr8.1:25226817-25226836 | None:intergenic | 30.0% | |
| AATTTAAATATGGTTGGGAG+GGG | - | chr8.1:25226040-25226059 | None:intergenic | 30.0% | |
| ACAAACTTAGTATAGTACCT+AGG | - | chr8.1:25224344-25224363 | None:intergenic | 30.0% | |
| ATTAGCACTCAAAACAAAAC+GGG | + | chr8.1:25226570-25226589 | MS.gene44446:CDS | 30.0% | |
| CATTAGCACTCAAAACAAAA+CGG | + | chr8.1:25226569-25226588 | MS.gene44446:CDS | 30.0% | |
| CTAATTTAAATATGGTTGGG+AGG | - | chr8.1:25226042-25226061 | None:intergenic | 30.0% | |
| CTCCCAACCATATTTAAATT+AGG | + | chr8.1:25226040-25226059 | MS.gene44446:intron | 30.0% | |
| GGTTCACAATTCTCTTTATA+TGG | + | chr8.1:25226773-25226792 | MS.gene44446:CDS | 30.0% | |
| TATAGCAGCGATTAAACATA+AGG | - | chr8.1:25226364-25226383 | None:intergenic | 30.0% | |
| TATCAATCTGTGAACACAAA+TGG | - | chr8.1:25224643-25224662 | None:intergenic | 30.0% | |
| TATTTGATTGTTAGTTCAGC+CGG | + | chr8.1:25224422-25224441 | MS.gene44446:intron | 30.0% | |
| TGCAAGGACAAAAGATATAT+TGG | + | chr8.1:25225807-25225826 | MS.gene44446:intron | 30.0% | |
| TTCTATGTTACAGATTGTTC+AGG | + | chr8.1:25226687-25226706 | MS.gene44446:CDS | 30.0% | |
| TTGCTCTCATATTTCATGTT+TGG | + | chr8.1:25224929-25224948 | MS.gene44446:intron | 30.0% | |
| ! | AGATTAGTCATCGCAAATAT+TGG | - | chr8.1:25225982-25226001 | None:intergenic | 30.0% |
| ! | TCTTGTTTCATATATGTGCA+GGG | + | chr8.1:25224485-25224504 | MS.gene44446:intron | 30.0% |
| ! | TTCTTGTTTCATATATGTGC+AGG | + | chr8.1:25224484-25224503 | MS.gene44446:intron | 30.0% |
| !! | GTTATACCAACTTTTGCTAT+TGG | + | chr8.1:25226834-25226853 | MS.gene44446:CDS | 30.0% |
| !! | TTACACAGGAGTACTTTATA+AGG | + | chr8.1:25226283-25226302 | MS.gene44446:intron | 30.0% |
| AAACACACATGGGATACTAT+TGG | + | chr8.1:25224667-25224686 | MS.gene44446:CDS | 35.0% | |
| AACTTAGTATAGTACCTAGG+TGG | - | chr8.1:25224341-25224360 | None:intergenic | 35.0% | |
| ACAACAAAACCGAAAAGCAA+AGG | + | chr8.1:25226334-25226353 | MS.gene44446:CDS | 35.0% | |
| AGAGATATCAGTGGTACTAA+TGG | + | chr8.1:25225263-25225282 | MS.gene44446:CDS | 35.0% | |
| AGTTGCATGCATTATCTATC+CGG | + | chr8.1:25225335-25225354 | MS.gene44446:CDS | 35.0% | |
| ATGCTTCCAATAGCAAAAGT+TGG | - | chr8.1:25226843-25226862 | None:intergenic | 35.0% | |
| ATTATCAGCCAACAAAACTC+AGG | + | chr8.1:25224225-25224244 | MS.gene44446:CDS | 35.0% | |
| ATTGATAGAGCAAACACACA+TGG | + | chr8.1:25224656-25224675 | MS.gene44446:CDS | 35.0% | |
| CAATGTATCATGTGTTACAC+AGG | + | chr8.1:25226269-25226288 | MS.gene44446:intron | 35.0% | |
| GAGTACTTTATAAGGAACCA+AGG | + | chr8.1:25226291-25226310 | MS.gene44446:CDS | 35.0% | |
| GTATCTATCCACTGAAACAT+GGG | - | chr8.1:25225619-25225638 | None:intergenic | 35.0% | |
| TATTGCATTGCAATGTTGCA+GGG | + | chr8.1:25226534-25226553 | MS.gene44446:intron | 35.0% | |
| TCAATTTCTCTATCGATGTG+AGG | - | chr8.1:25224296-25224315 | None:intergenic | 35.0% | |
| TCATACATTTCTTCTGATGG+CGG | + | chr8.1:25224734-25224753 | MS.gene44446:CDS | 35.0% | |
| TCCAATAACAAAAGCCTTCA+AGG | - | chr8.1:25226424-25226443 | None:intergenic | 35.0% | |
| TTAATCCATAGCATGAACTC+CGG | - | chr8.1:25224444-25224463 | None:intergenic | 35.0% | |
| TTAGCACTCAAAACAAAACG+GGG | + | chr8.1:25226571-25226590 | MS.gene44446:CDS | 35.0% | |
| TTAGTCATCGCAAATATTGG+TGG | - | chr8.1:25225979-25225998 | None:intergenic | 35.0% | |
| TTATTGCATTGCAATGTTGC+AGG | + | chr8.1:25226533-25226552 | MS.gene44446:intron | 35.0% | |
| TTGATAGAGCAAACACACAT+GGG | + | chr8.1:25224657-25224676 | MS.gene44446:CDS | 35.0% | |
| TTTGCATTTACAATGGTTCC+TGG | + | chr8.1:25226446-25226465 | MS.gene44446:intron | 35.0% | |
| ! | AAGAATTGAGTTTGGAGTAG+AGG | + | chr8.1:25226644-25226663 | MS.gene44446:CDS | 35.0% |
| ! | TTGCTATTGGAAGCATGATT+TGG | + | chr8.1:25226847-25226866 | MS.gene44446:CDS | 35.0% |
| !! | ACCTTGAAGGCTTTTGTTAT+TGG | + | chr8.1:25226420-25226439 | MS.gene44446:intron | 35.0% |
| !! | CTTGTTTTCAGAGATATCAG+TGG | + | chr8.1:25225254-25225273 | MS.gene44446:CDS | 35.0% |
| !! | GATTAATAATAGTATCGGCC+AGG | - | chr8.1:25226467-25226486 | None:intergenic | 35.0% |
| AAGAAAGAATCCATCCACCT+AGG | + | chr8.1:25224324-25224343 | MS.gene44446:CDS | 40.0% | |
| AATCGCTCTCTATCGTTGAT+TGG | - | chr8.1:25225381-25225400 | None:intergenic | 40.0% | |
| AATGTGATAGAGGCCAATGA+AGG | + | chr8.1:25225426-25225445 | MS.gene44446:CDS | 40.0% | |
| AATGTTGCCATAGAGGTGAT+AGG | + | chr8.1:25225216-25225235 | MS.gene44446:CDS | 40.0% | |
| ACACGCGTAATTCATGAGAA+TGG | + | chr8.1:25226609-25226628 | MS.gene44446:CDS | 40.0% | |
| ACATCATATCTGCAAAAGCC+TGG | + | chr8.1:25225298-25225317 | MS.gene44446:CDS | 40.0% | |
| ACATGGGATACTATTGGAGA+TGG | + | chr8.1:25224673-25224692 | MS.gene44446:CDS | 40.0% | |
| ACGACGAGAGATATTGAACT+AGG | - | chr8.1:25224373-25224392 | None:intergenic | 40.0% | |
| ACTATTGTTACTGGATGACG+AGG | - | chr8.1:25226808-25226827 | None:intergenic | 40.0% | |
| AGAAGCAAATGTTGCCATAG+AGG | + | chr8.1:25225209-25225228 | MS.gene44446:CDS | 40.0% | |
| AGCCTTCAAGGTATGAATCA+TGG | - | chr8.1:25226412-25226431 | None:intergenic | 40.0% | |
| AGCGTCTCATCAACAATTTC+AGG | + | chr8.1:25226880-25226899 | MS.gene44446:CDS | 40.0% | |
| ATGGCAACATTTGCTTCTTG+TGG | - | chr8.1:25225207-25225226 | None:intergenic | 40.0% | |
| ATGTTAAAAAGCTCCACCAC+CGG | + | chr8.1:25225477-25225496 | MS.gene44446:CDS | 40.0% | |
| CCATATCCTCTACGAAACAA+TGG | - | chr8.1:25224256-25224275 | None:intergenic | 40.0% | |
| CCATTGTTTCGTAGAGGATA+TGG | + | chr8.1:25224253-25224272 | MS.gene44446:CDS | 40.0% | |
| CGTATCTATCCACTGAAACA+TGG | - | chr8.1:25225620-25225639 | None:intergenic | 40.0% | |
| GATAATCGATGACTGATGCA+TGG | - | chr8.1:25224211-25224230 | None:intergenic | 40.0% | |
| GCAGCTATGGAATCTTTGTT+AGG | + | chr8.1:25224180-25224199 | MS.gene44446:CDS | 40.0% | |
| GCATGCAACTTTGTCATGAT+GGG | - | chr8.1:25225325-25225344 | None:intergenic | 40.0% | |
| GCCTTCAAGGTATGAATCAT+GGG | - | chr8.1:25226411-25226430 | None:intergenic | 40.0% | |
| GTAGAGGATGAAACAGCAAT+AGG | + | chr8.1:25226660-25226679 | MS.gene44446:CDS | 40.0% | |
| GTTGAACCATTGTTTCGTAG+AGG | + | chr8.1:25224247-25224266 | MS.gene44446:CDS | 40.0% | |
| GTTTCAGTGGATAGATACGA+GGG | + | chr8.1:25225621-25225640 | MS.gene44446:CDS | 40.0% | |
| GTTTCTGAACTATGCAGCTA+TGG | + | chr8.1:25224167-25224186 | MS.gene44446:CDS | 40.0% | |
| TAGTATAGTACCTAGGTGGA+TGG | - | chr8.1:25224337-25224356 | None:intergenic | 40.0% | |
| TCCATGTGAAGGATCAGATA+GGG | + | chr8.1:25224854-25224873 | MS.gene44446:CDS | 40.0% | |
| TCCCATGATTCATACCTTGA+AGG | + | chr8.1:25226407-25226426 | MS.gene44446:intron | 40.0% | |
| TGATTCATGCAGAAACTGCA+CGG | + | chr8.1:25224521-25224540 | MS.gene44446:CDS | 40.0% | |
| TGCAATGTTGCAGGGATTAA+AGG | + | chr8.1:25226542-25226561 | MS.gene44446:intron | 40.0% | |
| TGCATGCAACTTTGTCATGA+TGG | - | chr8.1:25225326-25225345 | None:intergenic | 40.0% | |
| TGTTACAGATTGTTCAGGTC+AGG | + | chr8.1:25226692-25226711 | MS.gene44446:CDS | 40.0% | |
| TGTTTCAGTGGATAGATACG+AGG | + | chr8.1:25225620-25225639 | MS.gene44446:CDS | 40.0% | |
| TTCCATGTGAAGGATCAGAT+AGG | + | chr8.1:25224853-25224872 | MS.gene44446:CDS | 40.0% | |
| TTTCAGTGGATAGATACGAG+GGG | + | chr8.1:25225622-25225641 | MS.gene44446:CDS | 40.0% | |
| ! | AATTGGTGGTTCAGTTGCTT+TGG | + | chr8.1:25226752-25226771 | MS.gene44446:CDS | 40.0% |
| ! | CATGACAGTTTTCCATGTGA+AGG | + | chr8.1:25224843-25224862 | MS.gene44446:intron | 40.0% |
| ! | GATATCTCTGAAAACAAGCC+AGG | - | chr8.1:25225252-25225271 | None:intergenic | 40.0% |
| ! | GCAATATGAGGTGTTTCATG+CGG | + | chr8.1:25225725-25225744 | MS.gene44446:CDS | 40.0% |
| !! | ATCAGTGGTACTAATGGACT+TGG | + | chr8.1:25225269-25225288 | MS.gene44446:CDS | 40.0% |
| !! | TAAGGTGAGCCTTTGCTTTT+CGG | - | chr8.1:25226346-25226365 | None:intergenic | 40.0% |
| !! | TCAGTGGTACTAATGGACTT+GGG | + | chr8.1:25225270-25225289 | MS.gene44446:CDS | 40.0% |
| !! | TGGTTCAACCTGAGTTTTGT+TGG | - | chr8.1:25224236-25224255 | None:intergenic | 40.0% |
| AACAGTGCAACACTGTTGCA+AGG | + | chr8.1:25225179-25225198 | MS.gene44446:CDS | 45.0% | |
| ACAACAACTTAGGACGATCC+CGG | - | chr8.1:25225677-25225696 | None:intergenic | 45.0% | |
| ACACTATCCTGCGTTTGTAG+AGG | + | chr8.1:25225012-25225031 | MS.gene44446:intron | 45.0% | |
| ACAGTGCAACACTGTTGCAA+GGG | + | chr8.1:25225180-25225199 | MS.gene44446:CDS | 45.0% | |
| AGCACAAAAGGCGGTATGAT+GGG | + | chr8.1:25225592-25225611 | MS.gene44446:CDS | 45.0% | |
| ATAATGGCGGTGAGCACAAA+AGG | + | chr8.1:25225580-25225599 | MS.gene44446:CDS | 45.0% | |
| ATAGAGGCCAATGAAGGAAG+GGG | + | chr8.1:25225432-25225451 | MS.gene44446:CDS | 45.0% | |
| ATCCGTTCCTATCACCTCTA+TGG | - | chr8.1:25225226-25225245 | None:intergenic | 45.0% | |
| ATGACAACTCTCGTAGTCAC+CGG | - | chr8.1:25225547-25225566 | None:intergenic | 45.0% | |
| CAAAACGGGGATACTATCGA+AGG | + | chr8.1:25226584-25226603 | MS.gene44446:CDS | 45.0% | |
| CTTAGATCCTCTACAAACGC+AGG | - | chr8.1:25225022-25225041 | None:intergenic | 45.0% | |
| GAAGGGGAGAGAAAGATATG+AGG | + | chr8.1:25225448-25225467 | MS.gene44446:CDS | 45.0% | |
| GACACTTCGCACCAATAACT+TGG | - | chr8.1:25225957-25225976 | None:intergenic | 45.0% | |
| GAGACTCTACAAATGCAGCA+CGG | + | chr8.1:25224951-25224970 | MS.gene44446:intron | 45.0% | |
| GATAGAGGCCAATGAAGGAA+GGG | + | chr8.1:25225431-25225450 | MS.gene44446:CDS | 45.0% | |
| GCTCACAGACATGCAATATG+AGG | + | chr8.1:25225713-25225732 | MS.gene44446:CDS | 45.0% | |
| TCAGATCCGGAATGTGATAG+AGG | + | chr8.1:25225416-25225435 | MS.gene44446:CDS | 45.0% | |
| TCCCTATCTGATCCTTCACA+TGG | - | chr8.1:25224858-25224877 | None:intergenic | 45.0% | |
| TCTCGTGAATCACATTGAGC+AGG | + | chr8.1:25224897-25224916 | MS.gene44446:CDS | 45.0% | |
| TGATAGAGGCCAATGAAGGA+AGG | + | chr8.1:25225430-25225449 | MS.gene44446:CDS | 45.0% | |
| TGCATGCATTATCTATCCGG+AGG | + | chr8.1:25225338-25225357 | MS.gene44446:CDS | 45.0% | |
| TGCCATAGAGGTGATAGGAA+CGG | + | chr8.1:25225221-25225240 | MS.gene44446:CDS | 45.0% | |
| TTAAATATGGTTGGGAGGGG+AGG | - | chr8.1:25226037-25226056 | None:intergenic | 45.0% | |
| TTTCTCTCCCCTTCCTTCAT+TGG | - | chr8.1:25225442-25225461 | None:intergenic | 45.0% | |
| ! | AATTGTTGATGAGACGCTCG+AGG | - | chr8.1:25226878-25226897 | None:intergenic | 45.0% |
| ! | CATTGGCCTCTATCACATTC+CGG | - | chr8.1:25225425-25225444 | None:intergenic | 45.0% |
| !! | AACTTTGTCATGATGGGTCC+AGG | - | chr8.1:25225319-25225338 | None:intergenic | 45.0% |
| !! | ACATTTCTTCTGATGGCGGA+TGG | + | chr8.1:25224738-25224757 | MS.gene44446:CDS | 45.0% |
| !! | TTCTGATGGCGGATGGTTAA+TGG | + | chr8.1:25224745-25224764 | MS.gene44446:CDS | 45.0% |
| !! | TTAATATAAATTGTATTAAT+TGG | - | chr8.1:25226215-25226234 | None:intergenic | 5.0% |
| CTCTGCAGAGGAATCTGACA+GGG | + | chr8.1:25226000-25226019 | MS.gene44446:intron | 50.0% | |
| GAGCACAAAAGGCGGTATGA+TGG | + | chr8.1:25225591-25225610 | MS.gene44446:CDS | 50.0% | |
| GCACAAAAGGCGGTATGATG+GGG | + | chr8.1:25225593-25225612 | MS.gene44446:CDS | 50.0% | |
| GCGATGACTAATCTCTGCAG+AGG | + | chr8.1:25225988-25226007 | MS.gene44446:intron | 50.0% | |
| GGTCTAGATCTGTCAACGTC+TGG | - | chr8.1:25224700-25224719 | None:intergenic | 50.0% | |
| GTGATAGGAACGGATCAACC+TGG | + | chr8.1:25225231-25225250 | MS.gene44446:CDS | 50.0% | |
| TCTCTGCAGAGGAATCTGAC+AGG | + | chr8.1:25225999-25226018 | MS.gene44446:intron | 50.0% | |
| TGTTACCTCAAACAGCCCCA+TGG | + | chr8.1:25225749-25225768 | MS.gene44446:CDS | 50.0% | |
| TTCAGCCGGAGTTCATGCTA+TGG | + | chr8.1:25224436-25224455 | MS.gene44446:intron | 50.0% | |
| TTCATGCAGAAACTGCACGG+TGG | + | chr8.1:25224524-25224543 | MS.gene44446:CDS | 50.0% | |
| ! | TCTCTATCGTTGATTGGCCC+AGG | - | chr8.1:25225375-25225394 | None:intergenic | 50.0% |
| ! | TGGAGTACCTGTTCTGCCAT+GGG | - | chr8.1:25225768-25225787 | None:intergenic | 50.0% |
| !! | GATGGCGGATGGTTAATGGA+TGG | + | chr8.1:25224749-25224768 | MS.gene44446:CDS | 50.0% |
| AAACAGCCCCATGGCAGAAC+AGG | + | chr8.1:25225758-25225777 | MS.gene44446:CDS | 55.0% | |
| AGAGTTGTCATGCCTGCCAC+GGG | + | chr8.1:25225556-25225575 | MS.gene44446:CDS | 55.0% | |
| ATGGCGGTGAGCACAAAAGG+CGG | + | chr8.1:25225583-25225602 | MS.gene44446:CDS | 55.0% | |
| CACCAGATGATGTACGCAGC+CGG | + | chr8.1:25225525-25225544 | MS.gene44446:CDS | 55.0% | |
| CAGAAACTGCACGGTGGTGA+AGG | + | chr8.1:25224530-25224549 | MS.gene44446:CDS | 55.0% | |
| CCCAAGTCGTGGATCAGATC+CGG | + | chr8.1:25225403-25225422 | MS.gene44446:CDS | 55.0% | |
| CCGGATCTGATCCACGACTT+GGG | - | chr8.1:25225406-25225425 | None:intergenic | 55.0% | |
| CCGGTCACAGTCATACCGAA+CGG | + | chr8.1:25225496-25225515 | MS.gene44446:CDS | 55.0% | |
| CCGTTCGGTATGACTGTGAC+CGG | - | chr8.1:25225499-25225518 | None:intergenic | 55.0% | |
| CTCTATCGATGTGAGGCTGC+TGG | - | chr8.1:25224289-25224308 | None:intergenic | 55.0% | |
| GAGAGTTGTCATGCCTGCCA+CGG | + | chr8.1:25225555-25225574 | MS.gene44446:CDS | 55.0% | |
| GATACGAGGGGCGAGATTAC+TGG | + | chr8.1:25225634-25225653 | MS.gene44446:CDS | 55.0% | |
| GGTCGGTGAATGTGAGAAGC+CGG | + | chr8.1:25225655-25225674 | MS.gene44446:CDS | 55.0% | |
| GTCACAGTCATACCGAACGG+AGG | + | chr8.1:25225499-25225518 | MS.gene44446:CDS | 55.0% | |
| GTCGGTGAATGTGAGAAGCC+GGG | + | chr8.1:25225656-25225675 | MS.gene44446:CDS | 55.0% | |
| TCCGGATCTGATCCACGACT+TGG | - | chr8.1:25225407-25225426 | None:intergenic | 55.0% | |
| TGATGGGGCCCATGTTTCAG+TGG | + | chr8.1:25225608-25225627 | MS.gene44446:CDS | 55.0% | |
| TTCGGTATGACTGTGACCGG+TGG | - | chr8.1:25225496-25225515 | None:intergenic | 55.0% | |
| TTCTGCCATGGGGCTGTTTG+AGG | - | chr8.1:25225757-25225776 | None:intergenic | 55.0% | |
| ! | AGAGCGATTAGCCCAAGTCG+TGG | + | chr8.1:25225392-25225411 | MS.gene44446:CDS | 55.0% |
| ! | ATCGTTGATTGGCCCAGGTC+TGG | - | chr8.1:25225370-25225389 | None:intergenic | 55.0% |
| ! | CTGGAGTACCTGTTCTGCCA+TGG | - | chr8.1:25225769-25225788 | None:intergenic | 55.0% |
| ! | GGAGTACCTGTTCTGCCATG+GGG | - | chr8.1:25225767-25225786 | None:intergenic | 55.0% |
| CATCTGGTGGAGCCTCCGTT+CGG | - | chr8.1:25225514-25225533 | None:intergenic | 60.0% | |
| CATGCCTGCCACGGGGATAA+TGG | + | chr8.1:25225564-25225583 | MS.gene44446:CDS | 60.0% | |
| CCAGGTCTGGATGCATCCTC+CGG | - | chr8.1:25225357-25225376 | None:intergenic | 60.0% | |
| CGAGGGGCGAGATTACTGGT+CGG | + | chr8.1:25225638-25225657 | MS.gene44446:CDS | 60.0% | |
| CGGAGGATGCATCCAGACCT+GGG | + | chr8.1:25225355-25225374 | MS.gene44446:CDS | 60.0% | |
| CGGCTGCGTACATCATCTGG+TGG | - | chr8.1:25225527-25225546 | None:intergenic | 60.0% | |
| GAGTTGTCATGCCTGCCACG+GGG | + | chr8.1:25225557-25225576 | MS.gene44446:CDS | 60.0% | |
| GGTATGACTGTGACCGGTGG+TGG | - | chr8.1:25225493-25225512 | None:intergenic | 60.0% | |
| GGTTGGGAGGGGAGGACTAA+AGG | - | chr8.1:25226029-25226048 | None:intergenic | 60.0% | |
| ! | CACCGGCTGCGTACATCATC+TGG | - | chr8.1:25225530-25225549 | None:intergenic | 60.0% |
| ACCGCCATTATCCCCGTGGC+AGG | - | chr8.1:25225571-25225590 | None:intergenic | 65.0% | |
| CCGGAGGATGCATCCAGACC+TGG | + | chr8.1:25225354-25225373 | MS.gene44446:CDS | 65.0% | |
| GCTCACCGCCATTATCCCCG+TGG | - | chr8.1:25225575-25225594 | None:intergenic | 65.0% | |
| ! | GCCTGCCACGGGGATAATGG+CGG | + | chr8.1:25225567-25225586 | MS.gene44446:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 25224152 | 25226917 | 25224152 | ID=MS.gene44446 |
| chr8.1 | mRNA | 25224152 | 25226917 | 25224152 | ID=MS.gene44446.t1;Parent=MS.gene44446 |
| chr8.1 | exon | 25224152 | 25224345 | 25224152 | ID=MS.gene44446.t1.exon1;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25224152 | 25224345 | 25224152 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25224506 | 25224551 | 25224506 | ID=MS.gene44446.t1.exon2;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25224506 | 25224551 | 25224506 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25224656 | 25224770 | 25224656 | ID=MS.gene44446.t1.exon3;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25224656 | 25224770 | 25224656 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25224851 | 25224918 | 25224851 | ID=MS.gene44446.t1.exon4;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25224851 | 25224918 | 25224851 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25225132 | 25225779 | 25225132 | ID=MS.gene44446.t1.exon5;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25225132 | 25225779 | 25225132 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25226291 | 25226401 | 25226291 | ID=MS.gene44446.t1.exon6;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25226291 | 25226401 | 25226291 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| chr8.1 | exon | 25226555 | 25226917 | 25226555 | ID=MS.gene44446.t1.exon7;Parent=MS.gene44446.t1 |
| chr8.1 | CDS | 25226555 | 25226917 | 25226555 | ID=cds.MS.gene44446.t1;Parent=MS.gene44446.t1 |
| Gene Sequence |
| Protein sequence |
