Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061124.t1 | XP_024627140.1 | 98.9 | 700 | 7 | 1 | 2 | 700 | 5 | 704 | 0.00E+00 | 1232.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061124.t1 | P51819 | 94.7 | 700 | 37 | 0 | 1 | 700 | 4 | 703 | 0.0e+00 | 1189.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061124.t1 | A0A2K3MY81 | 97.1 | 700 | 20 | 0 | 1 | 700 | 4 | 703 | 0.0e+00 | 1223.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061124 | MS.gene061126 | 0.996851 | 3.85E-233 | -1.69E-46 |
| MS.gene061124 | MS.gene49154 | 0.856061 | 4.15E-62 | -1.69E-46 |
| MS.gene061124 | MS.gene60613 | 0.922003 | 1.73E-88 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAAGAAGATTA+AGG | - | 7051:10289-10308 | MS.gene061124:intron | 15.0% |
| !! | ATTATATGTATCAAAATTCA+AGG | + | 7051:9764-9783 | MS.gene061124:intergenic | 15.0% |
| !! | CAATAATTTGAGAAATTAAA+TGG | - | 7051:9546-9565 | MS.gene061124:CDS | 15.0% |
| !! | TGATTTGAATTATTATTAGT+TGG | - | 7051:9888-9907 | MS.gene061124:CDS | 15.0% |
| !!! | TAAAATTATTTTCTTTCCAA+AGG | + | 7051:9671-9690 | MS.gene061124:intergenic | 15.0% |
| !!! | TTGGAAAGAAAATAATTTTA+TGG | - | 7051:9671-9690 | MS.gene061124:CDS | 15.0% |
| !! | AAAATTATACAATACAACCA+TGG | + | 7051:10007-10026 | MS.gene061124:intergenic | 20.0% |
| !! | ATGAACTTATGACATTATTA+TGG | - | 7051:9925-9944 | MS.gene061124:CDS | 20.0% |
| !! | GTTTGTAATTCATGTTTAAT+GGG | - | 7051:9166-9185 | MS.gene061124:CDS | 20.0% |
| !! | TGTTTGTAATTCATGTTTAA+TGG | - | 7051:9165-9184 | MS.gene061124:CDS | 20.0% |
| !! | TTAAATTAATTTACCTGCTT+TGG | + | 7051:9044-9063 | MS.gene061124:intergenic | 20.0% |
| !!! | CTGATTTTTTTTTTCATTAC+AGG | - | 7051:8886-8905 | MS.gene061124:CDS | 20.0% |
| ! | AAGGATATTTACTATATCAC+TGG | - | 7051:10932-10951 | MS.gene061124:CDS | 25.0% |
| ! | CTAGTATCAAACAAATCAAA+CGG | + | 7051:10512-10531 | MS.gene061124:intergenic | 25.0% |
| ! | GAAAAAAAAGAAGATTAAGG+AGG | - | 7051:10292-10311 | MS.gene061124:intron | 25.0% |
| ! | GATTCAAACAACAAGAAAAT+TGG | + | 7051:9844-9863 | MS.gene061124:intergenic | 25.0% |
| ! | TTGGAGAAACTTAAGAAAAA+GGG | - | 7051:10989-11008 | MS.gene061124:CDS | 25.0% |
| !! | AAATTATCAAAAAGTGTAGC+TGG | + | 7051:9810-9829 | MS.gene061124:intergenic | 25.0% |
| !! | AATTCGATTTGAAAGCTTAA+CGG | - | 7051:8919-8938 | MS.gene061124:CDS | 25.0% |
| !! | ATAAGAGCATAACTAATGAT+TGG | - | 7051:10405-10424 | MS.gene061124:intron | 25.0% |
| !! | ATGATGATGAACAATACATT+TGG | - | 7051:9368-9387 | MS.gene061124:CDS | 25.0% |
| !! | TAAGAGCATAACTAATGATT+GGG | - | 7051:10406-10425 | MS.gene061124:intron | 25.0% |
| !! | TGATGATGAACAATACATTT+GGG | - | 7051:9369-9388 | MS.gene061124:CDS | 25.0% |
| !! | TTCTCCAAGAATTTGAAATT+GGG | - | 7051:10788-10807 | MS.gene061124:intron | 25.0% |
| !! | TTTCTCCAAGAATTTGAAAT+TGG | - | 7051:10787-10806 | MS.gene061124:intron | 25.0% |
| !!! | ATAAGATTTTGAAGGTGATT+AGG | - | 7051:10684-10703 | MS.gene061124:intron | 25.0% |
| !!! | TGATTTATTGACTTTCTTGT+TGG | - | 7051:10065-10084 | MS.gene061124:CDS | 25.0% |
| !!! | TTGTTTGAATCACTTTTGTT+CGG | - | 7051:9853-9872 | MS.gene061124:CDS | 25.0% |
| !!! | TTTTTTTTCATTACAGGCTT+TGG | - | 7051:8892-8911 | MS.gene061124:CDS | 25.0% |
| ACACTATCAATCATTGATAG+TGG | - | 7051:9007-9026 | MS.gene061124:CDS | 30.0% | |
| AGAGAAGAAGAAATCATTTG+AGG | - | 7051:11156-11175 | MS.gene061124:intron | 30.0% | |
| AGATACCATTCTACAAAAAG+TGG | - | 7051:10857-10876 | MS.gene061124:CDS | 30.0% | |
| ATTGACACAAAAGGAAAAGA+GGG | + | 7051:10038-10057 | MS.gene061124:intergenic | 30.0% | |
| CAAACAACAAGAAAATTGGT+TGG | + | 7051:9840-9859 | MS.gene061124:intergenic | 30.0% | |
| CATTTGTCTATTGACACAAA+AGG | + | 7051:10047-10066 | MS.gene061124:intergenic | 30.0% | |
| CTTGGAGAAACTTAAGAAAA+AGG | - | 7051:10988-11007 | MS.gene061124:CDS | 30.0% | |
| GATACCCAATTTCAAATTCT+TGG | + | 7051:10795-10814 | MS.gene061124:intergenic | 30.0% | |
| TAAGTAAGAAAAACTCACGT+CGG | + | 7051:8816-8835 | MS.gene061124:intergenic | 30.0% | |
| TATGATTCAACACTAACCTT+TGG | - | 7051:9652-9671 | MS.gene061124:CDS | 30.0% | |
| TATGTTACCAGAATGAAAGA+GGG | - | 7051:10905-10924 | MS.gene061124:CDS | 30.0% | |
| TATTCTCTTTGTTCCCAAAA+GGG | - | 7051:10484-10503 | MS.gene061124:intron | 30.0% | |
| TATTGACACAAAAGGAAAAG+AGG | + | 7051:10039-10058 | MS.gene061124:intergenic | 30.0% | |
| TCTCTAGACTCATAATCATA+TGG | + | 7051:9572-9591 | MS.gene061124:intergenic | 30.0% | |
| TGTGTTATAGTTGGAATACT+TGG | - | 7051:10091-10110 | MS.gene061124:CDS | 30.0% | |
| TTCCATCATACTCCTTTAAT+TGG | + | 7051:11063-11082 | MS.gene061124:intergenic | 30.0% | |
| TTCTTAAGTTTCTCCAAGAA+TGG | + | 7051:10986-11005 | MS.gene061124:intergenic | 30.0% | |
| ! | GCAACAGAATAAGATTTTGA+AGG | - | 7051:10676-10695 | MS.gene061124:intron | 30.0% |
| ! | GTTGTTGATTGTTTCAGATT+TGG | - | 7051:9192-9211 | MS.gene061124:CDS | 30.0% |
| !! | CGTTTGATTTGTTTGATACT+AGG | - | 7051:10510-10529 | MS.gene061124:intron | 30.0% |
| !! | TCAGATTTGGTGAACAATTT+GGG | - | 7051:9205-9224 | MS.gene061124:CDS | 30.0% |
| !! | TTCAGATTTGGTGAACAATT+TGG | - | 7051:9204-9223 | MS.gene061124:CDS | 30.0% |
| !!! | TGTTGGTTTTGTGTTATAGT+TGG | - | 7051:10082-10101 | MS.gene061124:CDS | 30.0% |
| AATCATTTGAGGATCTATGC+AGG | - | 7051:11167-11186 | MS.gene061124:intron | 35.0% | |
| ACAATATCAAGCTGTATGTG+AGG | - | 7051:10543-10562 | MS.gene061124:intron | 35.0% | |
| ACTTAAGAAAAAGGGCTATG+AGG | - | 7051:10997-11016 | MS.gene061124:CDS | 35.0% | |
| AGTTGAGAAAGTAGTTGTCT+CGG | - | 7051:11216-11235 | MS.gene061124:intron | 35.0% | |
| ATTCTACCAGCAAACATGTT+TGG | + | 7051:11514-11533 | MS.gene061124:intergenic | 35.0% | |
| CAATGAGATTGCTGAGAATA+AGG | - | 7051:10739-10758 | MS.gene061124:intron | 35.0% | |
| CTATGTTACCAGAATGAAAG+AGG | - | 7051:10904-10923 | MS.gene061124:CDS | 35.0% | |
| CTATTCTCTTTGTTCCCAAA+AGG | - | 7051:10483-10502 | MS.gene061124:intron | 35.0% | |
| GAATCTTGATGTGATAACCA+TGG | - | 7051:9987-10006 | MS.gene061124:CDS | 35.0% | |
| GTTATAGTTGGAATACTTGG+AGG | - | 7051:10094-10113 | MS.gene061124:CDS | 35.0% | |
| TAAGAATGATAAGTCCGTGA+AGG | - | 7051:11429-11448 | MS.gene061124:intron | 35.0% | |
| TAAGATTACCTTGTTCCTCA+AGG | - | 7051:9459-9478 | MS.gene061124:CDS | 35.0% | |
| TAATGATTGGGAAGAACACT+TGG | - | 7051:10418-10437 | MS.gene061124:intron | 35.0% | |
| TAGTCAGAACAGAGCTAAAT+TGG | - | 7051:10823-10842 | MS.gene061124:intron | 35.0% | |
| TATGAGTCTAGAGACTAAGT+TGG | - | 7051:9578-9597 | MS.gene061124:CDS | 35.0% | |
| TGATGAACCTAAGAAGGAAA+AGG | - | 7051:10223-10242 | MS.gene061124:intron | 35.0% | |
| TGGATCTTTCACTGTTACTA+GGG | - | 7051:9405-9424 | MS.gene061124:CDS | 35.0% | |
| ! | GTTAGCATGATTGGTCAATT+TGG | - | 7051:9286-9305 | MS.gene061124:CDS | 35.0% |
| ! | TCTCTAGTGTGCATCTATTT+TGG | - | 7051:9726-9745 | MS.gene061124:CDS | 35.0% |
| ! | TTTGAAATTGGGTATCCATG+AGG | - | 7051:10799-10818 | MS.gene061124:intron | 35.0% |
| !! | ATCACTTTTGTTCGGTCATT+TGG | - | 7051:9861-9880 | MS.gene061124:CDS | 35.0% |
| !! | ATGATTGGTCAATTTGGTGT+TGG | - | 7051:9292-9311 | MS.gene061124:CDS | 35.0% |
| !! | CAACACTTTTTACAGCAACA+AGG | - | 7051:8757-8776 | MS.gene061124:CDS | 35.0% |
| !! | TCAATCATTGATAGTGGCAT+TGG | - | 7051:9013-9032 | MS.gene061124:CDS | 35.0% |
| !!! | AGTGTTTTGTTAGCCTTATC+AGG | + | 7051:8992-9011 | MS.gene061124:intergenic | 35.0% |
| !!! | CATCTCCACTTTTTGTAGAA+TGG | + | 7051:10865-10884 | MS.gene061124:intergenic | 35.0% |
| AAACATGGAGAGGATCATGA+AGG | - | 7051:11294-11313 | MS.gene061124:CDS | 40.0% | |
| AATGGTGAACAACTTGGAAG+AGG | - | 7051:9433-9452 | MS.gene061124:CDS | 40.0% | |
| AATTCACAGGATGTTGAAGC+TGG | - | 7051:11531-11550 | MS.gene061124:CDS | 40.0% | |
| ACAAGTCTGATGAAAAGCTC+TGG | + | 7051:8968-8987 | MS.gene061124:intergenic | 40.0% | |
| ACAATTTGGGTACTATTGCG+AGG | - | 7051:9218-9237 | MS.gene061124:CDS | 40.0% | |
| ACTGTTACTAGGGATGTCAA+TGG | - | 7051:9415-9434 | MS.gene061124:CDS | 40.0% | |
| AGAAAGTAGTTGTCTCGGAT+AGG | - | 7051:11221-11240 | MS.gene061124:intron | 40.0% | |
| AGATGAGATGACAAGCTTGA+AGG | - | 7051:10880-10899 | MS.gene061124:CDS | 40.0% | |
| ATATCAAGCTGTATGTGAGG+AGG | - | 7051:10546-10565 | MS.gene061124:intron | 40.0% | |
| ATATGGATGGAGTGCAAACA+TGG | - | 7051:11279-11298 | MS.gene061124:intron | 40.0% | |
| ATCTCACGAGAGATATTGAG+TGG | + | 7051:10653-10672 | MS.gene061124:intergenic | 40.0% | |
| ATGGCGCGTAAGATTTGAAA+CGG | - | 7051:9944-9963 | MS.gene061124:CDS | 40.0% | |
| ATTCACAGGATGTTGAAGCT+GGG | - | 7051:11532-11551 | MS.gene061124:CDS | 40.0% | |
| CAAACATGTTTGGATCATCC+AGG | + | 7051:11504-11523 | MS.gene061124:intergenic | 40.0% | |
| CAGAATGAAAGAGGGTCAAA+AGG | - | 7051:10913-10932 | MS.gene061124:CDS | 40.0% | |
| GAACCTAAGAAGGAAAAGGA+AGG | - | 7051:10227-10246 | MS.gene061124:intron | 40.0% | |
| GAGTACCTTGGATTTGTCAA+GGG | - | 7051:10605-10624 | MS.gene061124:intron | 40.0% | |
| GATGATCCAAACATGTTTGC+TGG | - | 7051:11505-11524 | MS.gene061124:intron | 40.0% | |
| GATGTCAATGGTGAACAACT+TGG | - | 7051:9427-9446 | MS.gene061124:CDS | 40.0% | |
| GTATGCTGTTGGCCAATTAA+AGG | - | 7051:11048-11067 | MS.gene061124:CDS | 40.0% | |
| GTCTGGTACAAAGGAATTCA+TGG | - | 7051:9240-9259 | MS.gene061124:CDS | 40.0% | |
| GTGGATCTTTCACTGTTACT+AGG | - | 7051:9404-9423 | MS.gene061124:CDS | 40.0% | |
| GTTAAGCATTTCTCTGTGGA+GGG | - | 7051:10443-10462 | MS.gene061124:intron | 40.0% | |
| TAAGCCAGAGGAAATTACCA+AGG | - | 7051:10364-10383 | MS.gene061124:intron | 40.0% | |
| TACAAAGGAAGGGTTGAAGT+TGG | - | 7051:11099-11118 | MS.gene061124:CDS | 40.0% | |
| TACATTTGGGAATCACAAGC+TGG | - | 7051:9382-9401 | MS.gene061124:CDS | 40.0% | |
| TATCAAGCTGTATGTGAGGA+GGG | - | 7051:10547-10566 | MS.gene061124:intron | 40.0% | |
| TATCACTGGTGAGAGTAAGA+AGG | - | 7051:10946-10965 | MS.gene061124:CDS | 40.0% | |
| TCAACAAGCAGAAACCAATC+TGG | - | 7051:10336-10355 | MS.gene061124:intron | 40.0% | |
| TCTCAAACAGAAGCAACACA+AGG | + | 7051:11456-11475 | MS.gene061124:intergenic | 40.0% | |
| TCTCAATGCACTTCTTCACA+AGG | + | 7051:10715-10734 | MS.gene061124:intergenic | 40.0% | |
| TCTCAGTCCAAAGGTAGATA+GGG | + | 7051:10169-10188 | MS.gene061124:intergenic | 40.0% | |
| TGAGGATGATGAACCTAAGA+AGG | - | 7051:10217-10236 | MS.gene061124:CDS | 40.0% | |
| TGAGGATGTAGATGAAGAGA+AGG | - | 7051:10256-10275 | MS.gene061124:intron | 40.0% | |
| TGAGTACCTTGGATTTGTCA+AGG | - | 7051:10604-10623 | MS.gene061124:intron | 40.0% | |
| TGGTACAAAGGAATTCATGG+AGG | - | 7051:9243-9262 | MS.gene061124:CDS | 40.0% | |
| TGGTATCTGCTACAAAGGAA+GGG | - | 7051:11089-11108 | MS.gene061124:CDS | 40.0% | |
| TGTATACCTGATCTTCCTTG+AGG | + | 7051:9477-9496 | MS.gene061124:intergenic | 40.0% | |
| TGTGGAGAATTCTCCATTCT+TGG | - | 7051:10970-10989 | MS.gene061124:CDS | 40.0% | |
| TGTGGATTCTCCATGTTGTT+TGG | - | 7051:11246-11265 | MS.gene061124:intron | 40.0% | |
| TGTTAAGCATTTCTCTGTGG+AGG | - | 7051:10442-10461 | MS.gene061124:intron | 40.0% | |
| TTAAGGAGGTTTCTCATGAG+TGG | - | 7051:10306-10325 | MS.gene061124:intron | 40.0% | |
| TTAGCTACCCTATCTACCTT+TGG | - | 7051:10159-10178 | MS.gene061124:CDS | 40.0% | |
| TTCTCAGTCCAAAGGTAGAT+AGG | + | 7051:10170-10189 | MS.gene061124:intergenic | 40.0% | |
| ! | AAATCAAACGGTGCCCTTTT+GGG | + | 7051:10500-10519 | MS.gene061124:intergenic | 40.0% |
| ! | CATCAGACTTGTTCCTGATA+AGG | - | 7051:8976-8995 | MS.gene061124:CDS | 40.0% |
| ! | CTTTTGACCCTCTTTCATTC+TGG | + | 7051:10915-10934 | MS.gene061124:intergenic | 40.0% |
| ! | GGCCAATTAAAGGAGTATGA+TGG | - | 7051:11058-11077 | MS.gene061124:CDS | 40.0% |
| ! | TCTCCTTCCTTTTCCTTCTT+AGG | + | 7051:10233-10252 | MS.gene061124:intergenic | 40.0% |
| ! | TGACAAATCCAAGGTACTCA+GGG | + | 7051:10604-10623 | MS.gene061124:intergenic | 40.0% |
| ! | TGATGATGAGACTGAGAAGT+TGG | + | 7051:8739-8758 | MS.gene061124:intergenic | 40.0% |
| ! | TGTCAGTGTTGTTGTGTGTT+TGG | - | 7051:9136-9155 | MS.gene061124:CDS | 40.0% |
| ! | TGTTTGCTGGTAGAATTCAC+AGG | - | 7051:11518-11537 | MS.gene061124:intron | 40.0% |
| ! | TGTTTGGTGACTGGTGAATA+TGG | - | 7051:11262-11281 | MS.gene061124:intron | 40.0% |
| ! | TTGACAAATCCAAGGTACTC+AGG | + | 7051:10605-10624 | MS.gene061124:intergenic | 40.0% |
| !!! | CTTAACTTCTGGTTTTAGCC+TGG | - | 7051:11483-11502 | MS.gene061124:intron | 40.0% |
| AAGCAACACAAGGTCCTTCA+CGG | + | 7051:11446-11465 | MS.gene061124:intergenic | 45.0% | |
| AGTTGTCTCGGATAGGATTG+TGG | - | 7051:11228-11247 | MS.gene061124:intron | 45.0% | |
| ATGGAGATCAACCCTGACAA+TGG | - | 7051:11370-11389 | MS.gene061124:CDS | 45.0% | |
| ATTGATGAGGAAGAGACTGG+TGG | - | 7051:11562-11581 | MS.gene061124:CDS | 45.0% | |
| ATTTGGGAATCACAAGCTGG+TGG | - | 7051:9385-9404 | MS.gene061124:CDS | 45.0% | |
| CAACCCTGACAATGGCATTA+TGG | - | 7051:11378-11397 | MS.gene061124:CDS | 45.0% | |
| CAGTAGTCTTCTCAGTCCAA+AGG | + | 7051:10178-10197 | MS.gene061124:intergenic | 45.0% | |
| CATGTCTAGCAAGAAGACCA+TGG | - | 7051:11351-11370 | MS.gene061124:CDS | 45.0% | |
| CATTGCTGATGAGTTCACGA+AGG | + | 7051:8790-8809 | MS.gene061124:intergenic | 45.0% | |
| CCTCCATAATGCCATTGTCA+GGG | + | 7051:11384-11403 | MS.gene061124:intergenic | 45.0% | |
| CTACACCCTTGACAAATCCA+AGG | + | 7051:10613-10632 | MS.gene061124:intergenic | 45.0% | |
| CTCTGTTCTGACTATCCTCA+TGG | + | 7051:10817-10836 | MS.gene061124:intergenic | 45.0% | |
| CTGATCTTCCTTGAGGAACA+AGG | + | 7051:9470-9489 | MS.gene061124:intergenic | 45.0% | |
| CTGGTATCTGCTACAAAGGA+AGG | - | 7051:11088-11107 | MS.gene061124:CDS | 45.0% | |
| CTTGGAGGAGAGAAGGATTA+AGG | - | 7051:10109-10128 | MS.gene061124:CDS | 45.0% | |
| CTTGTTCCTCAAGGAAGATC+AGG | - | 7051:9468-9487 | MS.gene061124:CDS | 45.0% | |
| GAAGCTGGTATCTGCTACAA+AGG | - | 7051:11084-11103 | MS.gene061124:CDS | 45.0% | |
| GAATGAAGCATACTCGTCCT+TGG | + | 7051:10384-10403 | MS.gene061124:intergenic | 45.0% | |
| GACTGAGAAGACTACTGAGA+AGG | - | 7051:10181-10200 | MS.gene061124:CDS | 45.0% | |
| GAGACAGCACTCTTAACTTC+TGG | - | 7051:11472-11491 | MS.gene061124:intron | 45.0% | |
| GCTATTGACGAGTATGCTGT+TGG | - | 7051:11037-11056 | MS.gene061124:CDS | 45.0% | |
| GGAAAAGGAAGGAGATGTTG+AGG | - | 7051:10238-10257 | MS.gene061124:intron | 45.0% | |
| GGCTGTTAAGCATTTCTCTG+TGG | - | 7051:10439-10458 | MS.gene061124:intron | 45.0% | |
| TATGGAGGAGCTGAGAAAGA+GGG | - | 7051:11396-11415 | MS.gene061124:CDS | 45.0% | |
| TATTGCGAGGTCTGGTACAA+AGG | - | 7051:9231-9250 | MS.gene061124:CDS | 45.0% | |
| TCACCAGTCACCAAACAACA+TGG | + | 7051:11259-11278 | MS.gene061124:intergenic | 45.0% | |
| TCCTCCATAATGCCATTGTC+AGG | + | 7051:11385-11404 | MS.gene061124:intergenic | 45.0% | |
| TGCTGAAACCTTTGCATTCC+AGG | - | 7051:8703-8722 | MS.gene061124:CDS | 45.0% | |
| TGGAATACTTGGAGGAGAGA+AGG | - | 7051:10102-10121 | MS.gene061124:CDS | 45.0% | |
| TGGTGACTGGTGAATATGGA+TGG | - | 7051:11266-11285 | MS.gene061124:intron | 45.0% | |
| TTATGGAGGAGCTGAGAAAG+AGG | - | 7051:11395-11414 | MS.gene061124:CDS | 45.0% | |
| TTCACAGGATGTTGAAGCTG+GGG | - | 7051:11533-11552 | MS.gene061124:CDS | 45.0% | |
| TTGAGAGATAGCAGCATGAG+TGG | - | 7051:11325-11344 | MS.gene061124:CDS | 45.0% | |
| ! | ATTGTCAGGGTTGATCTCCA+TGG | + | 7051:11371-11390 | MS.gene061124:intergenic | 45.0% |
| ! | CAAATCAAACGGTGCCCTTT+TGG | + | 7051:10501-10520 | MS.gene061124:intergenic | 45.0% |
| ! | GAAGGAGATCAGTGATGATG+AGG | - | 7051:10199-10218 | MS.gene061124:CDS | 45.0% |
| ! | GGAGTATGATGGAAAGAAGC+TGG | - | 7051:11069-11088 | MS.gene061124:CDS | 45.0% |
| ! | TCGTCCTTGGTAATTTCCTC+TGG | + | 7051:10371-10390 | MS.gene061124:intergenic | 45.0% |
| ! | TCTCCATGTTGTTTGGTGAC+TGG | - | 7051:11253-11272 | MS.gene061124:intron | 45.0% |
| ! | TGGATTTGTCAAGGGTGTAG+TGG | - | 7051:10613-10632 | MS.gene061124:intron | 45.0% |
| !! | AGCATTGATGAGGAAGAGAC+TGG | - | 7051:11559-11578 | MS.gene061124:CDS | 45.0% |
| !! | AGGACCATCAAGGAGGTATT+GGG | - | 7051:11187-11206 | MS.gene061124:intron | 45.0% |
| !! | CTATGAGGTGCTTTTCATGG+TGG | - | 7051:11012-11031 | MS.gene061124:CDS | 45.0% |
| !! | GACTAAGTTGGTAGCACTCA+TGG | - | 7051:9590-9609 | MS.gene061124:CDS | 45.0% |
| !! | TCATGGAGGCATTACAAGCT+GGG | - | 7051:9257-9276 | MS.gene061124:CDS | 45.0% |
| !! | TGTGAGGAGGGTGTTCATTA+TGG | - | 7051:10559-10578 | MS.gene061124:intron | 45.0% |
| !! | TTCATGGAGGCATTACAAGC+TGG | - | 7051:9256-9275 | MS.gene061124:CDS | 45.0% |
| AATCTGGTTGCGTAAGCCAG+AGG | - | 7051:10352-10371 | MS.gene061124:intron | 50.0% | |
| AGATGAAGACATGCCTCCAC+TGG | - | 7051:11585-11604 | MS.gene061124:CDS | 50.0% | |
| CCCTGACAATGGCATTATGG+AGG | - | 7051:11381-11400 | MS.gene061124:CDS | 50.0% | |
| GAAGTTGGATGAGGAGAGTG+AGG | - | 7051:11114-11133 | MS.gene061124:intron | 50.0% | |
| GATCTCAGCCTGGAATGCAA+AGG | + | 7051:8714-8733 | MS.gene061124:intergenic | 50.0% | |
| GATGGAGTGCAAACATGGAG+AGG | - | 7051:11284-11303 | MS.gene061124:intron | 50.0% | |
| GGAAGGGTTGAAGTTGGATG+AGG | - | 7051:11105-11124 | MS.gene061124:CDS | 50.0% | |
| GGAGGGTCAACTAGAGTTCA+AGG | - | 7051:10460-10479 | MS.gene061124:intron | 50.0% | |
| GGATCTATGCAGGACCATCA+AGG | - | 7051:11177-11196 | MS.gene061124:intron | 50.0% | |
| GGGGCTGATGTTAGCATGAT+TGG | - | 7051:9277-9296 | MS.gene061124:CDS | 50.0% | |
| GTCTCCCAATACCTCCTTGA+TGG | + | 7051:11194-11213 | MS.gene061124:intergenic | 50.0% | |
| TCTATGCAGGACCATCAAGG+AGG | - | 7051:11180-11199 | MS.gene061124:intron | 50.0% | |
| TGAAGAGAGCAAGATGGAGG+AGG | - | 7051:11621-11640 | MS.gene061124:CDS | 50.0% | |
| TGGTGAGAGTAAGAAGGCTG+TGG | - | 7051:10952-10971 | MS.gene061124:CDS | 50.0% | |
| TTGGGTACTATTGCGAGGTC+TGG | - | 7051:9223-9242 | MS.gene061124:CDS | 50.0% | |
| ! | CAGGACCATCAAGGAGGTAT+TGG | - | 7051:11186-11205 | MS.gene061124:intron | 50.0% |
| ! | GAAGTTGGTTGATCTCAGCC+TGG | + | 7051:8724-8743 | MS.gene061124:intergenic | 50.0% |
| ! | TCTGGCTTACGCAACCAGAT+TGG | + | 7051:10353-10372 | MS.gene061124:intergenic | 50.0% |
| !! | CATGGAGGCATTACAAGCTG+GGG | - | 7051:9258-9277 | MS.gene061124:CDS | 50.0% |
| !! | GGGCTATGAGGTGCTTTTCA+TGG | - | 7051:11009-11028 | MS.gene061124:CDS | 50.0% |
| AGCTGGCTGCACACAATGGA+AGG | + | 7051:9793-9812 | MS.gene061124:intergenic | 55.0% | |
| ATGCCTCCACTGGAGGAAGT+AGG | - | 7051:11595-11614 | MS.gene061124:CDS | 55.0% | |
| CGCTGAAGAGAGCAAGATGG+AGG | - | 7051:11618-11637 | MS.gene061124:CDS | 55.0% | |
| GAGCTCATCCCTGAGTACCT+TGG | - | 7051:10593-10612 | MS.gene061124:intron | 55.0% | |
| GTGTAGCTGGCTGCACACAA+TGG | + | 7051:9797-9816 | MS.gene061124:intergenic | 55.0% | |
| TGAAGACATGCCTCCACTGG+AGG | - | 7051:11588-11607 | MS.gene061124:CDS | 55.0% | |
| !! | AGGCGCTGAAGAGAGCAAGA+TGG | - | 7051:11615-11634 | MS.gene061124:CDS | 55.0% |
| !! | GGCATTGGCATGACCAAAGC+AGG | - | 7051:9028-9047 | MS.gene061124:CDS | 55.0% |
| TCAGCGCCTACTTCCTCCAG+TGG | + | 7051:11604-11623 | MS.gene061124:intergenic | 60.0% | |
| !! | GCTGGGGCTCAGCATTGATG+AGG | - | 7051:11549-11568 | MS.gene061124:CDS | 60.0% |
| GCGCCTACTTCCTCCAGTGG+AGG | + | 7051:11601-11620 | MS.gene061124:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 7051 | gene | 8687 | 11651 | 8687 | ID=MS.gene061124 |
| 7051 | mRNA | 8687 | 11651 | 8687 | ID=MS.gene061124.t1;Parent=MS.gene061124 |
| 7051 | exon | 11521 | 11651 | 11521 | ID=MS.gene061124.t1.exon1;Parent=MS.gene061124.t1 |
| 7051 | CDS | 11521 | 11651 | 11521 | ID=cds.MS.gene061124.t1;Parent=MS.gene061124.t1 |
| 7051 | exon | 11289 | 11430 | 11289 | ID=MS.gene061124.t1.exon2;Parent=MS.gene061124.t1 |
| 7051 | CDS | 11289 | 11430 | 11289 | ID=cds.MS.gene061124.t1;Parent=MS.gene061124.t1 |
| 7051 | exon | 10849 | 11129 | 10849 | ID=MS.gene061124.t1.exon3;Parent=MS.gene061124.t1 |
| 7051 | CDS | 10849 | 11129 | 10849 | ID=cds.MS.gene061124.t1;Parent=MS.gene061124.t1 |
| 7051 | exon | 8687 | 10237 | 8687 | ID=MS.gene061124.t1.exon4;Parent=MS.gene061124.t1 |
| 7051 | CDS | 8687 | 10237 | 8687 | ID=cds.MS.gene061124.t1;Parent=MS.gene061124.t1 |
| Gene Sequence |
| Protein sequence |
