Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061126.t1 | XP_024627140.1 | 98.9 | 699 | 7 | 1 | 1 | 698 | 6 | 704 | 0.00E+00 | 1230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061126.t1 | P51819 | 95.0 | 698 | 35 | 0 | 1 | 698 | 6 | 703 | 0.0e+00 | 1187.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061126.t1 | A0A2K3MY81 | 97.1 | 698 | 20 | 0 | 1 | 698 | 6 | 703 | 0.0e+00 | 1219.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061124 | MS.gene061126 | 0.996851 | 3.85E-233 | -1.69E-46 |
| MS.gene061126 | MS.gene49154 | 0.853091 | 3.00E-61 | -1.69E-46 |
| MS.gene061126 | MS.gene60613 | 0.918819 | 9.73E-87 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061126.t1 | MTR_1g099840 | 96.567 | 699 | 8 | 2 | 1 | 698 | 6 | 689 | 0.0 | 1359 |
| MS.gene061126.t1 | MTR_6g452990 | 95.279 | 699 | 32 | 1 | 1 | 698 | 1 | 699 | 0.0 | 1273 |
| MS.gene061126.t1 | MTR_5g096430 | 87.143 | 700 | 87 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1147 |
| MS.gene061126.t1 | MTR_5g096460 | 87.143 | 700 | 87 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1147 |
| MS.gene061126.t1 | MTR_1g025430 | 49.364 | 707 | 312 | 8 | 3 | 670 | 76 | 775 | 0.0 | 656 |
| MS.gene061126.t1 | MTR_5g097320 | 47.189 | 676 | 337 | 10 | 4 | 668 | 89 | 755 | 0.0 | 592 |
| MS.gene061126.t1 | MTR_0009s0390 | 44.774 | 708 | 364 | 10 | 4 | 697 | 81 | 775 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061126.t1 | AT5G52640 | 89.286 | 700 | 73 | 2 | 1 | 698 | 1 | 700 | 0.0 | 1206 |
| MS.gene061126.t1 | AT5G56000 | 84.429 | 700 | 106 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1135 |
| MS.gene061126.t1 | AT5G56030 | 85.286 | 700 | 100 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1129 |
| MS.gene061126.t1 | AT5G56010 | 85.143 | 700 | 101 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1126 |
| MS.gene061126.t1 | AT5G56030 | 81.893 | 729 | 100 | 4 | 1 | 698 | 1 | 728 | 0.0 | 1114 |
| MS.gene061126.t1 | AT4G24190 | 50.071 | 705 | 308 | 8 | 3 | 670 | 75 | 772 | 0.0 | 650 |
| MS.gene061126.t1 | AT4G24190 | 50.071 | 705 | 308 | 8 | 3 | 670 | 75 | 772 | 0.0 | 650 |
| MS.gene061126.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene061126.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene061126.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene061126.t1 | AT2G04030 | 47.563 | 677 | 328 | 10 | 4 | 668 | 76 | 737 | 0.0 | 601 |
| MS.gene061126.t1 | AT2G04030 | 47.111 | 675 | 331 | 10 | 4 | 668 | 76 | 734 | 0.0 | 592 |
Find 164 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCCAAGAATTTGAAAT+TGG | 0.171299 | 1.4:-77570590 | MS.gene061126:CDS |
| CTTGGAGAAACTTAAGAAAA+AGG | 0.178941 | 1.4:-77570389 | MS.gene061126:CDS |
| TTCAGATTTGGTGAACAATT+TGG | 0.182629 | 1.4:-77572173 | MS.gene061126:intron |
| TTCCATCATACTCCTTTAAT+TGG | 0.201211 | 1.4:+77570317 | None:intergenic |
| CAAATCAAACGGTGCCCTTT+TGG | 0.205259 | 1.4:+77570879 | None:intergenic |
| TGCTGAAACCTTTGCATTCC+AGG | 0.239703 | 1.4:-77572674 | MS.gene061126:CDS |
| GATACCCAATTTCAAATTCT+TGG | 0.247197 | 1.4:+77570585 | None:intergenic |
| GTCTCCCAATACCTCCTTGA+TGG | 0.280128 | 1.4:+77570186 | None:intergenic |
| TTAAATTAATTTACCTGCTT+TGG | 0.287566 | 1.4:+77572336 | None:intergenic |
| AAGATGGAGGAGGTTGATTA+AGG | 0.291854 | 1.4:-77569746 | None:intergenic |
| GTTAGCATGATTGGTCAATT+TGG | 0.295958 | 1.4:-77572091 | MS.gene061126:CDS |
| TGTTTGGTGACTGGTGAATA+TGG | 0.317819 | 1.4:-77570115 | MS.gene061126:CDS |
| CTTGGAGGAGAGAAGGATTA+AGG | 0.334725 | 1.4:-77571268 | MS.gene061126:CDS |
| TAGTCAGAACAGAGCTAAAT+TGG | 0.338612 | 1.4:-77570554 | MS.gene061126:CDS |
| GTATGCTGTTGGCCAATTAA+AGG | 0.342228 | 1.4:-77570329 | MS.gene061126:CDS |
| TGTGGAGAATTCTCCATTCT+TGG | 0.342762 | 1.4:-77570407 | MS.gene061126:CDS |
| CAACCCTGACAATGGCATTA+TGG | 0.344688 | 1.4:-77569999 | MS.gene061126:CDS |
| CATCAGACTTGTTCCTGATA+AGG | 0.350012 | 1.4:-77572401 | MS.gene061126:CDS |
| TCAGATTTGGTGAACAATTT+GGG | 0.350972 | 1.4:-77572172 | MS.gene061126:intron |
| ATGATGATGAACAATACATT+TGG | 0.355356 | 1.4:-77572009 | MS.gene061126:CDS |
| CAATGAGATTGCTGAGAATA+AGG | 0.366299 | 1.4:-77570638 | MS.gene061126:CDS |
| CGTTTGATTTGTTTGATACT+AGG | 0.369680 | 1.4:-77570867 | MS.gene061126:CDS |
| AATTCGATTTGAAAGCTTAA+CGG | 0.373408 | 1.4:-77572458 | MS.gene061126:CDS |
| TGTGAGGAGGGTGTTCATTA+TGG | 0.374488 | 1.4:-77570818 | MS.gene061126:CDS |
| CAGGACCATCAAGGAGGTAT+TGG | 0.383987 | 1.4:-77570191 | MS.gene061126:CDS |
| GTGGATCTTTCACTGTTACT+AGG | 0.388088 | 1.4:-77571973 | MS.gene061126:CDS |
| TTCTCAGTCCAAAGGTAGAT+AGG | 0.389672 | 1.4:+77571210 | None:intergenic |
| GAGACAGCACTCTTAACTTC+TGG | 0.389999 | 1.4:-77569905 | MS.gene061126:CDS |
| ATTCTACCAGCAAACATGTT+TGG | 0.393274 | 1.4:+77569866 | None:intergenic |
| TTCTCCAAGAATTTGAAATT+GGG | 0.395764 | 1.4:-77570589 | MS.gene061126:CDS |
| TTCTTAAGTTTCTCCAAGAA+TGG | 0.397153 | 1.4:+77570394 | None:intergenic |
| TTAGCTACCCTATCTACCTT+TGG | 0.400749 | 1.4:-77571218 | MS.gene061126:CDS |
| TGTGGATTCTCCATGTTGTT+TGG | 0.400821 | 1.4:-77570131 | MS.gene061126:CDS |
| TCGTCCTTGGTAATTTCCTC+TGG | 0.402183 | 1.4:+77571009 | None:intergenic |
| GTCTGGTACAAAGGAATTCA+TGG | 0.410673 | 1.4:-77572137 | MS.gene061126:CDS |
| ATAAGAGCATAACTAATGAT+TGG | 0.418044 | 1.4:-77570972 | MS.gene061126:CDS |
| CTATTCTCTTTGTTCCCAAA+AGG | 0.422208 | 1.4:-77570894 | MS.gene061126:CDS |
| TGTGTTATAGTTGGAATACT+TGG | 0.431020 | 1.4:-77571286 | MS.gene061126:intron |
| TGGATCTTTCACTGTTACTA+GGG | 0.435649 | 1.4:-77571972 | MS.gene061126:CDS |
| CTTGTTCCTCAAGGAAGATC+AGG | 0.435854 | 1.4:-77571909 | MS.gene061126:intron |
| TTCATGGAGGCATTACAAGC+TGG | 0.436032 | 1.4:-77572121 | MS.gene061126:CDS |
| TCCTCCATAATGCCATTGTC+AGG | 0.437528 | 1.4:+77569995 | None:intergenic |
| GAAGCTGGTATCTGCTACAA+AGG | 0.437907 | 1.4:-77570293 | MS.gene061126:CDS |
| TCTCCATGTTGTTTGGTGAC+TGG | 0.440901 | 1.4:-77570124 | MS.gene061126:CDS |
| TGATGATGAACAATACATTT+GGG | 0.441950 | 1.4:-77572008 | MS.gene061126:CDS |
| GATGATCCAAACATGTTTGC+TGG | 0.447088 | 1.4:-77569872 | MS.gene061126:CDS |
| AGGACCATCAAGGAGGTATT+GGG | 0.450304 | 1.4:-77570190 | MS.gene061126:CDS |
| AGAGAAGAAGAAATCATTTG+AGG | 0.455191 | 1.4:-77570221 | MS.gene061126:CDS |
| GGCATTGGCATGACCAAAGC+AGG | 0.455988 | 1.4:-77572349 | MS.gene061126:intron |
| TTGGGTACTATTGCGAGGTC+TGG | 0.456286 | 1.4:-77572154 | MS.gene061126:CDS |
| GGGGCTGATGTTAGCATGAT+TGG | 0.460557 | 1.4:-77572100 | MS.gene061126:CDS |
| TAAGAGCATAACTAATGATT+GGG | 0.461224 | 1.4:-77570971 | MS.gene061126:CDS |
| ACACTATCAATCATTGATAG+TGG | 0.464512 | 1.4:-77572370 | MS.gene061126:CDS |
| TGAGGATGTAGATGAAGAGA+AGG | 0.466876 | 1.4:-77571121 | MS.gene061126:CDS |
| GGAGGGTCAACTAGAGTTCA+AGG | 0.468530 | 1.4:-77570917 | MS.gene061126:CDS |
| TATTGCGAGGTCTGGTACAA+AGG | 0.469662 | 1.4:-77572146 | MS.gene061126:CDS |
| TGGAATACTTGGAGGAGAGA+AGG | 0.475060 | 1.4:-77571275 | MS.gene061126:CDS |
| CAGAATGAAAGAGGGTCAAA+AGG | 0.480856 | 1.4:-77570464 | MS.gene061126:CDS |
| CTGGTATCTGCTACAAAGGA+AGG | 0.485817 | 1.4:-77570289 | MS.gene061126:CDS |
| AATTCACAGGATGTTGAAGC+TGG | 0.485968 | 1.4:-77569846 | MS.gene061126:CDS |
| TATTCTCTTTGTTCCCAAAA+GGG | 0.486731 | 1.4:-77570893 | MS.gene061126:CDS |
| TGTTAAGCATTTCTCTGTGG+AGG | 0.488508 | 1.4:-77570935 | MS.gene061126:CDS |
| TCAATCATTGATAGTGGCAT+TGG | 0.489484 | 1.4:-77572364 | MS.gene061126:CDS |
| GGAAAAGGAAGGAGATGTTG+AGG | 0.493255 | 1.4:-77571139 | MS.gene061126:CDS |
| GTTATAGTTGGAATACTTGG+AGG | 0.493605 | 1.4:-77571283 | MS.gene061126:intron |
| GAAGTTGGATGAGGAGAGTG+AGG | 0.493740 | 1.4:-77570263 | MS.gene061126:CDS |
| GGAGTATGATGGAAAGAAGC+TGG | 0.494717 | 1.4:-77570308 | MS.gene061126:CDS |
| CTCTGTTCTGACTATCCTCA+TGG | 0.496112 | 1.4:+77570563 | None:intergenic |
| TGATGATGAGACTGAGAAGT+TGG | 0.496914 | 1.4:+77572641 | None:intergenic |
| TGATGAACCTAAGAAGGAAA+AGG | 0.503008 | 1.4:-77571154 | MS.gene061126:CDS |
| TGAGTACCTTGGATTTGTCA+AGG | 0.505185 | 1.4:-77570773 | MS.gene061126:CDS |
| GGAAGGGTTGAAGTTGGATG+AGG | 0.506953 | 1.4:-77570272 | MS.gene061126:CDS |
| AGATGAAGACATGCCTCCAC+TGG | 0.507205 | 1.4:-77569792 | MS.gene061126:CDS |
| GATGTCAATGGTGAACAACT+TGG | 0.511608 | 1.4:-77571950 | MS.gene061126:CDS |
| TCATGGAGGCATTACAAGCT+GGG | 0.511949 | 1.4:-77572120 | MS.gene061126:CDS |
| TTGACAAATCCAAGGTACTC+AGG | 0.512897 | 1.4:+77570775 | None:intergenic |
| TCAACAAGCAGAAACCAATC+TGG | 0.514259 | 1.4:-77571041 | MS.gene061126:CDS |
| ATGATTGGTCAATTTGGTGT+TGG | 0.514305 | 1.4:-77572085 | MS.gene061126:CDS |
| ACAAGTCTGATGAAAAGCTC+TGG | 0.517102 | 1.4:+77572412 | None:intergenic |
| AAGCAACACAAGGTCCTTCA+CGG | 0.522281 | 1.4:+77569934 | None:intergenic |
| CTAGTATCAAACAAATCAAA+CGG | 0.523583 | 1.4:+77570868 | None:intergenic |
| TAATGATTGGGAAGAACACT+TGG | 0.527807 | 1.4:-77570959 | MS.gene061126:CDS |
| TCTGGCTTACGCAACCAGAT+TGG | 0.530199 | 1.4:+77571027 | None:intergenic |
| GAATGAAGCATACTCGTCCT+TGG | 0.530562 | 1.4:+77570996 | None:intergenic |
| GAGTACCTTGGATTTGTCAA+GGG | 0.535864 | 1.4:-77570772 | MS.gene061126:CDS |
| AAGGATATTTACTATATCAC+TGG | 0.536155 | 1.4:-77570445 | MS.gene061126:CDS |
| TGGATTTGTCAAGGGTGTAG+TGG | 0.539035 | 1.4:-77570764 | MS.gene061126:CDS |
| GTTAAGCATTTCTCTGTGGA+GGG | 0.539665 | 1.4:-77570934 | MS.gene061126:CDS |
| ATTGTCAGGGTTGATCTCCA+TGG | 0.542460 | 1.4:+77570009 | None:intergenic |
| AGATGAGATGACAAGCTTGA+AGG | 0.542488 | 1.4:-77570497 | MS.gene061126:CDS |
| ACTGTTACTAGGGATGTCAA+TGG | 0.543110 | 1.4:-77571962 | MS.gene061126:CDS |
| GAGCTCATCCCTGAGTACCT+TGG | 0.550986 | 1.4:-77570784 | MS.gene061126:CDS |
| TGAGGATGATGAACCTAAGA+AGG | 0.554886 | 1.4:-77571160 | MS.gene061126:CDS |
| AGTTGTCTCGGATAGGATTG+TGG | 0.557675 | 1.4:-77570149 | MS.gene061126:CDS |
| TTATGGAGGAGCTGAGAAAG+AGG | 0.558690 | 1.4:-77569982 | MS.gene061126:CDS |
| TGAAGAGAGCAAGATGGAGG+AGG | 0.560190 | 1.4:-77569756 | MS.gene061126:CDS |
| CTATGTTACCAGAATGAAAG+AGG | 0.562239 | 1.4:-77570473 | MS.gene061126:CDS |
| TCTCAGTCCAAAGGTAGATA+GGG | 0.562769 | 1.4:+77571211 | None:intergenic |
| AGGCGCTGAAGAGAGCAAGA+TGG | 0.563156 | 1.4:-77569762 | MS.gene061126:CDS |
| AGTTGAGAAAGTAGTTGTCT+CGG | 0.565740 | 1.4:-77570161 | MS.gene061126:CDS |
| TTGAGAGATAGCAGCATGAG+TGG | 0.568101 | 1.4:-77570052 | MS.gene061126:CDS |
| TAAGATTACCTTGTTCCTCA+AGG | 0.569189 | 1.4:-77571918 | MS.gene061126:CDS |
| ATTCACAGGATGTTGAAGCT+GGG | 0.569221 | 1.4:-77569845 | MS.gene061126:CDS |
| TACAAAGGAAGGGTTGAAGT+TGG | 0.570527 | 1.4:-77570278 | MS.gene061126:CDS |
| CTGATCTTCCTTGAGGAACA+AGG | 0.572292 | 1.4:+77571910 | None:intergenic |
| CAAACATGTTTGGATCATCC+AGG | 0.572455 | 1.4:+77569876 | None:intergenic |
| GGCCAATTAAAGGAGTATGA+TGG | 0.574049 | 1.4:-77570319 | MS.gene061126:CDS |
| GAAGTTGGTTGATCTCAGCC+TGG | 0.575545 | 1.4:+77572656 | None:intergenic |
| TGGTGACTGGTGAATATGGA+TGG | 0.578088 | 1.4:-77570111 | MS.gene061126:CDS |
| AATCATTTGAGGATCTATGC+AGG | 0.578345 | 1.4:-77570210 | MS.gene061126:CDS |
| TGGTGAGAGTAAGAAGGCTG+TGG | 0.582985 | 1.4:-77570425 | MS.gene061126:CDS |
| TGTTTGCTGGTAGAATTCAC+AGG | 0.586334 | 1.4:-77569859 | MS.gene061126:CDS |
| TTAAGGAGGTTTCTCATGAG+TGG | 0.588342 | 1.4:-77571071 | MS.gene061126:CDS |
| TATCACTGGTGAGAGTAAGA+AGG | 0.590152 | 1.4:-77570431 | MS.gene061126:CDS |
| AATGGTGAACAACTTGGAAG+AGG | 0.590183 | 1.4:-77571944 | MS.gene061126:CDS |
| AGAAAGTAGTTGTCTCGGAT+AGG | 0.591723 | 1.4:-77570156 | MS.gene061126:CDS |
| GGCTGTTAAGCATTTCTCTG+TGG | 0.595552 | 1.4:-77570938 | MS.gene061126:CDS |
| ATGCCTCCACTGGAGGAAGT+AGG | 0.596007 | 1.4:-77569782 | MS.gene061126:CDS |
| GGATCTATGCAGGACCATCA+AGG | 0.596813 | 1.4:-77570200 | MS.gene061126:CDS |
| AGCATTGATGAGGAAGAGAC+TGG | 0.596838 | 1.4:-77569818 | MS.gene061126:CDS |
| CGCTGAAGAGAGCAAGATGG+AGG | 0.597067 | 1.4:-77569759 | MS.gene061126:CDS |
| TACATTTGGGAATCACAAGC+TGG | 0.598338 | 1.4:-77571995 | MS.gene061126:CDS |
| GACTGAGAAGACTACTGAGA+AGG | 0.602168 | 1.4:-77571196 | MS.gene061126:CDS |
| TTCACAGGATGTTGAAGCTG+GGG | 0.602382 | 1.4:-77569844 | MS.gene061126:CDS |
| ATATGGATGGAGTGCAAACA+TGG | 0.604123 | 1.4:-77570098 | MS.gene061126:CDS |
| CAGTAGTCTTCTCAGTCCAA+AGG | 0.604801 | 1.4:+77571202 | None:intergenic |
| TGACAAATCCAAGGTACTCA+GGG | 0.611848 | 1.4:+77570776 | None:intergenic |
| ATATCAAGCTGTATGTGAGG+AGG | 0.615471 | 1.4:-77570831 | MS.gene061126:CDS |
| GATCTCAGCCTGGAATGCAA+AGG | 0.619501 | 1.4:+77572666 | None:intergenic |
| GAAGGAGATCAGTGATGATG+AGG | 0.626522 | 1.4:-77571178 | MS.gene061126:CDS |
| GAACCTAAGAAGGAAAAGGA+AGG | 0.626940 | 1.4:-77571150 | MS.gene061126:CDS |
| TCTCAATGCACTTCTTCACA+AGG | 0.627680 | 1.4:+77570665 | None:intergenic |
| GCGCCTACTTCCTCCAGTGG+AGG | 0.628820 | 1.4:+77569779 | None:intergenic |
| TGGTATCTGCTACAAAGGAA+GGG | 0.629588 | 1.4:-77570288 | MS.gene061126:CDS |
| TATCAAGCTGTATGTGAGGA+GGG | 0.629910 | 1.4:-77570830 | MS.gene061126:CDS |
| TATGGAGGAGCTGAGAAAGA+GGG | 0.630167 | 1.4:-77569981 | MS.gene061126:CDS |
| TCAGCGCCTACTTCCTCCAG+TGG | 0.632812 | 1.4:+77569776 | None:intergenic |
| CATGGAGGCATTACAAGCTG+GGG | 0.633123 | 1.4:-77572119 | MS.gene061126:CDS |
| CCTCCATAATGCCATTGTCA+GGG | 0.633801 | 1.4:+77569996 | None:intergenic |
| TCACCAGTCACCAAACAACA+TGG | 0.634548 | 1.4:+77570121 | None:intergenic |
| ATGGAGATCAACCCTGACAA+TGG | 0.636528 | 1.4:-77570007 | MS.gene061126:CDS |
| CATGTCTAGCAAGAAGACCA+TGG | 0.639969 | 1.4:-77570026 | MS.gene061126:CDS |
| ATTTGGGAATCACAAGCTGG+TGG | 0.641832 | 1.4:-77571992 | MS.gene061126:CDS |
| CCCTGACAATGGCATTATGG+AGG | 0.643069 | 1.4:-77569996 | MS.gene061126:CDS |
| GATGGAGTGCAAACATGGAG+AGG | 0.643902 | 1.4:-77570093 | MS.gene061126:CDS |
| TAAGAATGATAAGTCCGTGA+AGG | 0.645850 | 1.4:-77569948 | MS.gene061126:CDS |
| GCTGGGGCTCAGCATTGATG+AGG | 0.646731 | 1.4:-77569828 | MS.gene061126:CDS |
| CTACACCCTTGACAAATCCA+AGG | 0.647229 | 1.4:+77570767 | None:intergenic |
| GCTATTGACGAGTATGCTGT+TGG | 0.649715 | 1.4:-77570340 | MS.gene061126:CDS |
| TGTATACCTGATCTTCCTTG+AGG | 0.654298 | 1.4:+77571903 | None:intergenic |
| ACAATTTGGGTACTATTGCG+AGG | 0.656937 | 1.4:-77572159 | MS.gene061126:CDS |
| ATCTCACGAGAGATATTGAG+TGG | 0.657230 | 1.4:+77570727 | None:intergenic |
| AATCTGGTTGCGTAAGCCAG+AGG | 0.658174 | 1.4:-77571025 | MS.gene061126:CDS |
| ACAATATCAAGCTGTATGTG+AGG | 0.660885 | 1.4:-77570834 | MS.gene061126:CDS |
| TGAAGACATGCCTCCACTGG+AGG | 0.665463 | 1.4:-77569789 | MS.gene061126:CDS |
| AAACATGGAGAGGATCATGA+AGG | 0.667122 | 1.4:-77570083 | MS.gene061126:CDS |
| TTTGAAATTGGGTATCCATG+AGG | 0.672057 | 1.4:-77570578 | MS.gene061126:CDS |
| TATGTTACCAGAATGAAAGA+GGG | 0.686570 | 1.4:-77570472 | MS.gene061126:CDS |
| TCTCAAACAGAAGCAACACA+AGG | 0.697952 | 1.4:+77569924 | None:intergenic |
| ATTGATGAGGAAGAGACTGG+TGG | 0.705591 | 1.4:-77569815 | MS.gene061126:CDS |
| TAAGCCAGAGGAAATTACCA+AGG | 0.721489 | 1.4:-77571013 | MS.gene061126:CDS |
| CATTGCTGATGAGTTCACGA+AGG | 0.740684 | 1.4:+77572590 | None:intergenic |
| TCTATGCAGGACCATCAAGG+AGG | 0.752495 | 1.4:-77570197 | MS.gene061126:CDS |
| TGGTACAAAGGAATTCATGG+AGG | 0.756490 | 1.4:-77572134 | MS.gene061126:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAAGAAGATTA+AGG | - | chr1.4:77571342-77571361 | MS.gene061126:intron | 15.0% |
| !! | ATTATATGTATCAAAATTCA+AGG | + | chr1.4:77570817-77570836 | None:intergenic | 15.0% |
| !! | CAATAATTTGAGAAATTAAA+TGG | - | chr1.4:77570599-77570618 | MS.gene061126:CDS | 15.0% |
| !! | TGATTTGAATTATTATTAGT+TGG | - | chr1.4:77570941-77570960 | MS.gene061126:CDS | 15.0% |
| !!! | TAAAATTATTTTCTTTCCAA+AGG | + | chr1.4:77570724-77570743 | None:intergenic | 15.0% |
| !!! | TTGGAAAGAAAATAATTTTA+TGG | - | chr1.4:77570724-77570743 | MS.gene061126:CDS | 15.0% |
| !! | AAAATTATACAATACAACCA+TGG | + | chr1.4:77571060-77571079 | None:intergenic | 20.0% |
| !! | ATGAACTTATGACATTATTA+TGG | - | chr1.4:77570978-77570997 | MS.gene061126:CDS | 20.0% |
| !! | GTTTGTAATTCATGTTTAAT+GGG | - | chr1.4:77570219-77570238 | MS.gene061126:CDS | 20.0% |
| !! | TGTTTGTAATTCATGTTTAA+TGG | - | chr1.4:77570218-77570237 | MS.gene061126:CDS | 20.0% |
| !! | TTAAATTAATTTACCTGCTT+TGG | + | chr1.4:77570097-77570116 | None:intergenic | 20.0% |
| !!! | CTGATTTTTTTTTTCATTAC+AGG | - | chr1.4:77569939-77569958 | MS.gene061126:CDS | 20.0% |
| ! | AAGGATATTTACTATATCAC+TGG | - | chr1.4:77571985-77572004 | MS.gene061126:CDS | 25.0% |
| ! | CTAGTATCAAACAAATCAAA+CGG | + | chr1.4:77571565-77571584 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGAAGATTAAGG+AGG | - | chr1.4:77571345-77571364 | MS.gene061126:intron | 25.0% |
| ! | GATTCAAACAACAAGAAAAT+TGG | + | chr1.4:77570897-77570916 | None:intergenic | 25.0% |
| ! | TTGGAGAAACTTAAGAAAAA+GGG | - | chr1.4:77572042-77572061 | MS.gene061126:CDS | 25.0% |
| !! | AAATTATCAAAAAGTGTAGC+TGG | + | chr1.4:77570863-77570882 | None:intergenic | 25.0% |
| !! | AATTCGATTTGAAAGCTTAA+CGG | - | chr1.4:77569972-77569991 | MS.gene061126:CDS | 25.0% |
| !! | ATAAGAGCATAACTAATGAT+TGG | - | chr1.4:77571458-77571477 | MS.gene061126:intron | 25.0% |
| !! | ATGATGATGAACAATACATT+TGG | - | chr1.4:77570421-77570440 | MS.gene061126:CDS | 25.0% |
| !! | TAAGAGCATAACTAATGATT+GGG | - | chr1.4:77571459-77571478 | MS.gene061126:intron | 25.0% |
| !! | TGATGATGAACAATACATTT+GGG | - | chr1.4:77570422-77570441 | MS.gene061126:CDS | 25.0% |
| !! | TTCTCCAAGAATTTGAAATT+GGG | - | chr1.4:77571841-77571860 | MS.gene061126:intron | 25.0% |
| !! | TTTCTCCAAGAATTTGAAAT+TGG | - | chr1.4:77571840-77571859 | MS.gene061126:intron | 25.0% |
| !!! | ATAAGATTTTGAAGGTGATT+AGG | - | chr1.4:77571737-77571756 | MS.gene061126:intron | 25.0% |
| !!! | TGATTTATTGACTTTCTTGT+TGG | - | chr1.4:77571118-77571137 | MS.gene061126:CDS | 25.0% |
| !!! | TTGTTTGAATCACTTTTGTT+CGG | - | chr1.4:77570906-77570925 | MS.gene061126:CDS | 25.0% |
| !!! | TTTTTTTTCATTACAGGCTT+TGG | - | chr1.4:77569945-77569964 | MS.gene061126:CDS | 25.0% |
| ACACTATCAATCATTGATAG+TGG | - | chr1.4:77570060-77570079 | MS.gene061126:CDS | 30.0% | |
| AGAGAAGAAGAAATCATTTG+AGG | - | chr1.4:77572209-77572228 | MS.gene061126:intron | 30.0% | |
| AGATACCATTCTACAAAAAG+TGG | - | chr1.4:77571910-77571929 | MS.gene061126:CDS | 30.0% | |
| ATTGACACAAAAGGAAAAGA+GGG | + | chr1.4:77571091-77571110 | None:intergenic | 30.0% | |
| CAAACAACAAGAAAATTGGT+TGG | + | chr1.4:77570893-77570912 | None:intergenic | 30.0% | |
| CATTTGTCTATTGACACAAA+AGG | + | chr1.4:77571100-77571119 | None:intergenic | 30.0% | |
| CTTGGAGAAACTTAAGAAAA+AGG | - | chr1.4:77572041-77572060 | MS.gene061126:CDS | 30.0% | |
| GATACCCAATTTCAAATTCT+TGG | + | chr1.4:77571848-77571867 | None:intergenic | 30.0% | |
| TAAGTAAGAAAAACTCACGT+CGG | + | chr1.4:77569869-77569888 | None:intergenic | 30.0% | |
| TATGATTCAACACTAACCTT+TGG | - | chr1.4:77570705-77570724 | MS.gene061126:CDS | 30.0% | |
| TATGTTACCAGAATGAAAGA+GGG | - | chr1.4:77571958-77571977 | MS.gene061126:CDS | 30.0% | |
| TATTCTCTTTGTTCCCAAAA+GGG | - | chr1.4:77571537-77571556 | MS.gene061126:intron | 30.0% | |
| TATTGACACAAAAGGAAAAG+AGG | + | chr1.4:77571092-77571111 | None:intergenic | 30.0% | |
| TCTCTAGACTCATAATCATA+TGG | + | chr1.4:77570625-77570644 | None:intergenic | 30.0% | |
| TGTGTTATAGTTGGAATACT+TGG | - | chr1.4:77571144-77571163 | MS.gene061126:CDS | 30.0% | |
| TTCCATCATACTCCTTTAAT+TGG | + | chr1.4:77572116-77572135 | None:intergenic | 30.0% | |
| TTCTTAAGTTTCTCCAAGAA+TGG | + | chr1.4:77572039-77572058 | None:intergenic | 30.0% | |
| ! | GCAACAGAATAAGATTTTGA+AGG | - | chr1.4:77571729-77571748 | MS.gene061126:intron | 30.0% |
| ! | GTTGTTGATTGTTTCAGATT+TGG | - | chr1.4:77570245-77570264 | MS.gene061126:CDS | 30.0% |
| !! | CGTTTGATTTGTTTGATACT+AGG | - | chr1.4:77571563-77571582 | MS.gene061126:intron | 30.0% |
| !! | TCAGATTTGGTGAACAATTT+GGG | - | chr1.4:77570258-77570277 | MS.gene061126:CDS | 30.0% |
| !! | TTCAGATTTGGTGAACAATT+TGG | - | chr1.4:77570257-77570276 | MS.gene061126:CDS | 30.0% |
| !!! | TGTTGGTTTTGTGTTATAGT+TGG | - | chr1.4:77571135-77571154 | MS.gene061126:CDS | 30.0% |
| AATCATTTGAGGATCTATGC+AGG | - | chr1.4:77572220-77572239 | MS.gene061126:intron | 35.0% | |
| ACAATATCAAGCTGTATGTG+AGG | - | chr1.4:77571596-77571615 | MS.gene061126:intron | 35.0% | |
| ACTTAAGAAAAAGGGCTATG+AGG | - | chr1.4:77572050-77572069 | MS.gene061126:CDS | 35.0% | |
| AGTTGAGAAAGTAGTTGTCT+CGG | - | chr1.4:77572269-77572288 | MS.gene061126:intron | 35.0% | |
| ATTCTACCAGCAAACATGTT+TGG | + | chr1.4:77572567-77572586 | None:intergenic | 35.0% | |
| CAATGAGATTGCTGAGAATA+AGG | - | chr1.4:77571792-77571811 | MS.gene061126:intron | 35.0% | |
| CTATGTTACCAGAATGAAAG+AGG | - | chr1.4:77571957-77571976 | MS.gene061126:CDS | 35.0% | |
| CTATTCTCTTTGTTCCCAAA+AGG | - | chr1.4:77571536-77571555 | MS.gene061126:intron | 35.0% | |
| GAATCTTGATGTGATAACCA+TGG | - | chr1.4:77571040-77571059 | MS.gene061126:CDS | 35.0% | |
| GTTATAGTTGGAATACTTGG+AGG | - | chr1.4:77571147-77571166 | MS.gene061126:CDS | 35.0% | |
| TAAGAATGATAAGTCCGTGA+AGG | - | chr1.4:77572482-77572501 | MS.gene061126:intron | 35.0% | |
| TAAGATTACCTTGTTCCTCA+AGG | - | chr1.4:77570512-77570531 | MS.gene061126:CDS | 35.0% | |
| TAATGATTGGGAAGAACACT+TGG | - | chr1.4:77571471-77571490 | MS.gene061126:intron | 35.0% | |
| TAGTCAGAACAGAGCTAAAT+TGG | - | chr1.4:77571876-77571895 | MS.gene061126:intron | 35.0% | |
| TATGAGTCTAGAGACTAAGT+TGG | - | chr1.4:77570631-77570650 | MS.gene061126:CDS | 35.0% | |
| TGATGAACCTAAGAAGGAAA+AGG | - | chr1.4:77571276-77571295 | MS.gene061126:CDS | 35.0% | |
| TGGATCTTTCACTGTTACTA+GGG | - | chr1.4:77570458-77570477 | MS.gene061126:CDS | 35.0% | |
| ! | GTTAGCATGATTGGTCAATT+TGG | - | chr1.4:77570339-77570358 | MS.gene061126:CDS | 35.0% |
| ! | TCTCTAGTGTGCATCTATTT+TGG | - | chr1.4:77570779-77570798 | MS.gene061126:CDS | 35.0% |
| ! | TTTGAAATTGGGTATCCATG+AGG | - | chr1.4:77571852-77571871 | MS.gene061126:intron | 35.0% |
| !! | ATCACTTTTGTTCGGTCATT+TGG | - | chr1.4:77570914-77570933 | MS.gene061126:CDS | 35.0% |
| !! | ATGATTGGTCAATTTGGTGT+TGG | - | chr1.4:77570345-77570364 | MS.gene061126:CDS | 35.0% |
| !! | CAACACTTTTTACAGCAACA+AGG | - | chr1.4:77569810-77569829 | MS.gene061126:CDS | 35.0% |
| !! | TCAATCATTGATAGTGGCAT+TGG | - | chr1.4:77570066-77570085 | MS.gene061126:CDS | 35.0% |
| !!! | AGTGTTTTGTTAGCCTTATC+AGG | + | chr1.4:77570045-77570064 | None:intergenic | 35.0% |
| !!! | CATCTCCACTTTTTGTAGAA+TGG | + | chr1.4:77571918-77571937 | None:intergenic | 35.0% |
| AAACATGGAGAGGATCATGA+AGG | - | chr1.4:77572347-77572366 | MS.gene061126:intron | 40.0% | |
| AATGGTGAACAACTTGGAAG+AGG | - | chr1.4:77570486-77570505 | MS.gene061126:CDS | 40.0% | |
| AATTCACAGGATGTTGAAGC+TGG | - | chr1.4:77572584-77572603 | MS.gene061126:CDS | 40.0% | |
| ACAAGTCTGATGAAAAGCTC+TGG | + | chr1.4:77570021-77570040 | None:intergenic | 40.0% | |
| ACAATTTGGGTACTATTGCG+AGG | - | chr1.4:77570271-77570290 | MS.gene061126:CDS | 40.0% | |
| ACTGTTACTAGGGATGTCAA+TGG | - | chr1.4:77570468-77570487 | MS.gene061126:CDS | 40.0% | |
| AGAAAGTAGTTGTCTCGGAT+AGG | - | chr1.4:77572274-77572293 | MS.gene061126:intron | 40.0% | |
| AGATGAGATGACAAGCTTGA+AGG | - | chr1.4:77571933-77571952 | MS.gene061126:CDS | 40.0% | |
| ATATCAAGCTGTATGTGAGG+AGG | - | chr1.4:77571599-77571618 | MS.gene061126:intron | 40.0% | |
| ATATGGATGGAGTGCAAACA+TGG | - | chr1.4:77572332-77572351 | MS.gene061126:intron | 40.0% | |
| ATCTCACGAGAGATATTGAG+TGG | + | chr1.4:77571706-77571725 | None:intergenic | 40.0% | |
| ATGGCGCGTAAGATTTGAAA+CGG | - | chr1.4:77570997-77571016 | MS.gene061126:CDS | 40.0% | |
| ATTCACAGGATGTTGAAGCT+GGG | - | chr1.4:77572585-77572604 | MS.gene061126:CDS | 40.0% | |
| CAAACATGTTTGGATCATCC+AGG | + | chr1.4:77572557-77572576 | None:intergenic | 40.0% | |
| CAGAATGAAAGAGGGTCAAA+AGG | - | chr1.4:77571966-77571985 | MS.gene061126:CDS | 40.0% | |
| GAACCTAAGAAGGAAAAGGA+AGG | - | chr1.4:77571280-77571299 | MS.gene061126:intron | 40.0% | |
| GAGTACCTTGGATTTGTCAA+GGG | - | chr1.4:77571658-77571677 | MS.gene061126:intron | 40.0% | |
| GATGATCCAAACATGTTTGC+TGG | - | chr1.4:77572558-77572577 | MS.gene061126:intron | 40.0% | |
| GATGTCAATGGTGAACAACT+TGG | - | chr1.4:77570480-77570499 | MS.gene061126:CDS | 40.0% | |
| GTATGCTGTTGGCCAATTAA+AGG | - | chr1.4:77572101-77572120 | MS.gene061126:CDS | 40.0% | |
| GTCTGGTACAAAGGAATTCA+TGG | - | chr1.4:77570293-77570312 | MS.gene061126:CDS | 40.0% | |
| GTGGATCTTTCACTGTTACT+AGG | - | chr1.4:77570457-77570476 | MS.gene061126:CDS | 40.0% | |
| GTTAAGCATTTCTCTGTGGA+GGG | - | chr1.4:77571496-77571515 | MS.gene061126:intron | 40.0% | |
| TAAGCCAGAGGAAATTACCA+AGG | - | chr1.4:77571417-77571436 | MS.gene061126:intron | 40.0% | |
| TACAAAGGAAGGGTTGAAGT+TGG | - | chr1.4:77572152-77572171 | MS.gene061126:CDS | 40.0% | |
| TACATTTGGGAATCACAAGC+TGG | - | chr1.4:77570435-77570454 | MS.gene061126:CDS | 40.0% | |
| TATCAAGCTGTATGTGAGGA+GGG | - | chr1.4:77571600-77571619 | MS.gene061126:intron | 40.0% | |
| TATCACTGGTGAGAGTAAGA+AGG | - | chr1.4:77571999-77572018 | MS.gene061126:CDS | 40.0% | |
| TCAACAAGCAGAAACCAATC+TGG | - | chr1.4:77571389-77571408 | MS.gene061126:intron | 40.0% | |
| TCTCAAACAGAAGCAACACA+AGG | + | chr1.4:77572509-77572528 | None:intergenic | 40.0% | |
| TCTCAATGCACTTCTTCACA+AGG | + | chr1.4:77571768-77571787 | None:intergenic | 40.0% | |
| TCTCAGTCCAAAGGTAGATA+GGG | + | chr1.4:77571222-77571241 | None:intergenic | 40.0% | |
| TGAGGATGATGAACCTAAGA+AGG | - | chr1.4:77571270-77571289 | MS.gene061126:CDS | 40.0% | |
| TGAGGATGTAGATGAAGAGA+AGG | - | chr1.4:77571309-77571328 | MS.gene061126:intron | 40.0% | |
| TGAGTACCTTGGATTTGTCA+AGG | - | chr1.4:77571657-77571676 | MS.gene061126:intron | 40.0% | |
| TGGTACAAAGGAATTCATGG+AGG | - | chr1.4:77570296-77570315 | MS.gene061126:CDS | 40.0% | |
| TGGTATCTGCTACAAAGGAA+GGG | - | chr1.4:77572142-77572161 | MS.gene061126:CDS | 40.0% | |
| TGTATACCTGATCTTCCTTG+AGG | + | chr1.4:77570530-77570549 | None:intergenic | 40.0% | |
| TGTGGAGAATTCTCCATTCT+TGG | - | chr1.4:77572023-77572042 | MS.gene061126:CDS | 40.0% | |
| TGTGGATTCTCCATGTTGTT+TGG | - | chr1.4:77572299-77572318 | MS.gene061126:intron | 40.0% | |
| TGTTAAGCATTTCTCTGTGG+AGG | - | chr1.4:77571495-77571514 | MS.gene061126:intron | 40.0% | |
| TTAAGGAGGTTTCTCATGAG+TGG | - | chr1.4:77571359-77571378 | MS.gene061126:intron | 40.0% | |
| TTAGCTACCCTATCTACCTT+TGG | - | chr1.4:77571212-77571231 | MS.gene061126:CDS | 40.0% | |
| TTCTCAGTCCAAAGGTAGAT+AGG | + | chr1.4:77571223-77571242 | None:intergenic | 40.0% | |
| ! | AAATCAAACGGTGCCCTTTT+GGG | + | chr1.4:77571553-77571572 | None:intergenic | 40.0% |
| ! | CATCAGACTTGTTCCTGATA+AGG | - | chr1.4:77570029-77570048 | MS.gene061126:CDS | 40.0% |
| ! | CTTTTGACCCTCTTTCATTC+TGG | + | chr1.4:77571968-77571987 | None:intergenic | 40.0% |
| ! | GGCCAATTAAAGGAGTATGA+TGG | - | chr1.4:77572111-77572130 | MS.gene061126:CDS | 40.0% |
| ! | TCTCCTTCCTTTTCCTTCTT+AGG | + | chr1.4:77571286-77571305 | None:intergenic | 40.0% |
| ! | TGACAAATCCAAGGTACTCA+GGG | + | chr1.4:77571657-77571676 | None:intergenic | 40.0% |
| ! | TGATGATGAGACTGAGAAGT+TGG | + | chr1.4:77569792-77569811 | None:intergenic | 40.0% |
| ! | TGTCAGTGTTGTTGTGTGTT+TGG | - | chr1.4:77570189-77570208 | MS.gene061126:CDS | 40.0% |
| ! | TGTTTGCTGGTAGAATTCAC+AGG | - | chr1.4:77572571-77572590 | MS.gene061126:intron | 40.0% |
| ! | TGTTTGGTGACTGGTGAATA+TGG | - | chr1.4:77572315-77572334 | MS.gene061126:intron | 40.0% |
| ! | TTGACAAATCCAAGGTACTC+AGG | + | chr1.4:77571658-77571677 | None:intergenic | 40.0% |
| !!! | CTTAACTTCTGGTTTTAGCC+TGG | - | chr1.4:77572536-77572555 | MS.gene061126:intron | 40.0% |
| AAGCAACACAAGGTCCTTCA+CGG | + | chr1.4:77572499-77572518 | None:intergenic | 45.0% | |
| AGTTGTCTCGGATAGGATTG+TGG | - | chr1.4:77572281-77572300 | MS.gene061126:intron | 45.0% | |
| ATGGAGATCAACCCTGACAA+TGG | - | chr1.4:77572423-77572442 | MS.gene061126:CDS | 45.0% | |
| ATTGATGAGGAAGAGACTGG+TGG | - | chr1.4:77572615-77572634 | MS.gene061126:CDS | 45.0% | |
| ATTTGGGAATCACAAGCTGG+TGG | - | chr1.4:77570438-77570457 | MS.gene061126:CDS | 45.0% | |
| CAACCCTGACAATGGCATTA+TGG | - | chr1.4:77572431-77572450 | MS.gene061126:CDS | 45.0% | |
| CAGTAGTCTTCTCAGTCCAA+AGG | + | chr1.4:77571231-77571250 | None:intergenic | 45.0% | |
| CATGTCTAGCAAGAAGACCA+TGG | - | chr1.4:77572404-77572423 | MS.gene061126:CDS | 45.0% | |
| CATTGCTGATGAGTTCACGA+AGG | + | chr1.4:77569843-77569862 | None:intergenic | 45.0% | |
| CCTCCATAATGCCATTGTCA+GGG | + | chr1.4:77572437-77572456 | None:intergenic | 45.0% | |
| CTACACCCTTGACAAATCCA+AGG | + | chr1.4:77571666-77571685 | None:intergenic | 45.0% | |
| CTCTGTTCTGACTATCCTCA+TGG | + | chr1.4:77571870-77571889 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGAGGAACA+AGG | + | chr1.4:77570523-77570542 | None:intergenic | 45.0% | |
| CTGGTATCTGCTACAAAGGA+AGG | - | chr1.4:77572141-77572160 | MS.gene061126:CDS | 45.0% | |
| CTTGGAGGAGAGAAGGATTA+AGG | - | chr1.4:77571162-77571181 | MS.gene061126:CDS | 45.0% | |
| CTTGTTCCTCAAGGAAGATC+AGG | - | chr1.4:77570521-77570540 | MS.gene061126:CDS | 45.0% | |
| GAAGCTGGTATCTGCTACAA+AGG | - | chr1.4:77572137-77572156 | MS.gene061126:CDS | 45.0% | |
| GAATGAAGCATACTCGTCCT+TGG | + | chr1.4:77571437-77571456 | None:intergenic | 45.0% | |
| GACTGAGAAGACTACTGAGA+AGG | - | chr1.4:77571234-77571253 | MS.gene061126:CDS | 45.0% | |
| GAGACAGCACTCTTAACTTC+TGG | - | chr1.4:77572525-77572544 | MS.gene061126:intron | 45.0% | |
| GCTATTGACGAGTATGCTGT+TGG | - | chr1.4:77572090-77572109 | MS.gene061126:CDS | 45.0% | |
| GGAAAAGGAAGGAGATGTTG+AGG | - | chr1.4:77571291-77571310 | MS.gene061126:intron | 45.0% | |
| GGCTGTTAAGCATTTCTCTG+TGG | - | chr1.4:77571492-77571511 | MS.gene061126:intron | 45.0% | |
| TATGGAGGAGCTGAGAAAGA+GGG | - | chr1.4:77572449-77572468 | MS.gene061126:CDS | 45.0% | |
| TATTGCGAGGTCTGGTACAA+AGG | - | chr1.4:77570284-77570303 | MS.gene061126:CDS | 45.0% | |
| TCACCAGTCACCAAACAACA+TGG | + | chr1.4:77572312-77572331 | None:intergenic | 45.0% | |
| TCCTCCATAATGCCATTGTC+AGG | + | chr1.4:77572438-77572457 | None:intergenic | 45.0% | |
| TGCTGAAACCTTTGCATTCC+AGG | - | chr1.4:77569756-77569775 | MS.gene061126:CDS | 45.0% | |
| TGGAATACTTGGAGGAGAGA+AGG | - | chr1.4:77571155-77571174 | MS.gene061126:CDS | 45.0% | |
| TGGTGACTGGTGAATATGGA+TGG | - | chr1.4:77572319-77572338 | MS.gene061126:intron | 45.0% | |
| TTATGGAGGAGCTGAGAAAG+AGG | - | chr1.4:77572448-77572467 | MS.gene061126:CDS | 45.0% | |
| TTCACAGGATGTTGAAGCTG+GGG | - | chr1.4:77572586-77572605 | MS.gene061126:CDS | 45.0% | |
| TTGAGAGATAGCAGCATGAG+TGG | - | chr1.4:77572378-77572397 | MS.gene061126:CDS | 45.0% | |
| ! | ATTGTCAGGGTTGATCTCCA+TGG | + | chr1.4:77572424-77572443 | None:intergenic | 45.0% |
| ! | CAAATCAAACGGTGCCCTTT+TGG | + | chr1.4:77571554-77571573 | None:intergenic | 45.0% |
| ! | GAAGGAGATCAGTGATGATG+AGG | - | chr1.4:77571252-77571271 | MS.gene061126:CDS | 45.0% |
| ! | GGAGTATGATGGAAAGAAGC+TGG | - | chr1.4:77572122-77572141 | MS.gene061126:CDS | 45.0% |
| ! | TCGTCCTTGGTAATTTCCTC+TGG | + | chr1.4:77571424-77571443 | None:intergenic | 45.0% |
| ! | TCTCCATGTTGTTTGGTGAC+TGG | - | chr1.4:77572306-77572325 | MS.gene061126:intron | 45.0% |
| ! | TGGATTTGTCAAGGGTGTAG+TGG | - | chr1.4:77571666-77571685 | MS.gene061126:intron | 45.0% |
| !! | AGCATTGATGAGGAAGAGAC+TGG | - | chr1.4:77572612-77572631 | MS.gene061126:CDS | 45.0% |
| !! | AGGACCATCAAGGAGGTATT+GGG | - | chr1.4:77572240-77572259 | MS.gene061126:intron | 45.0% |
| !! | CTATGAGGTGCTTTTCATGG+TGG | - | chr1.4:77572065-77572084 | MS.gene061126:CDS | 45.0% |
| !! | GACTAAGTTGGTAGCACTCA+TGG | - | chr1.4:77570643-77570662 | MS.gene061126:CDS | 45.0% |
| !! | TCATGGAGGCATTACAAGCT+GGG | - | chr1.4:77570310-77570329 | MS.gene061126:CDS | 45.0% |
| !! | TGTGAGGAGGGTGTTCATTA+TGG | - | chr1.4:77571612-77571631 | MS.gene061126:intron | 45.0% |
| !! | TTCATGGAGGCATTACAAGC+TGG | - | chr1.4:77570309-77570328 | MS.gene061126:CDS | 45.0% |
| AATCTGGTTGCGTAAGCCAG+AGG | - | chr1.4:77571405-77571424 | MS.gene061126:intron | 50.0% | |
| AGATGAAGACATGCCTCCAC+TGG | - | chr1.4:77572638-77572657 | MS.gene061126:CDS | 50.0% | |
| CCCTGACAATGGCATTATGG+AGG | - | chr1.4:77572434-77572453 | MS.gene061126:CDS | 50.0% | |
| GAAGTTGGATGAGGAGAGTG+AGG | - | chr1.4:77572167-77572186 | MS.gene061126:CDS | 50.0% | |
| GATCTCAGCCTGGAATGCAA+AGG | + | chr1.4:77569767-77569786 | None:intergenic | 50.0% | |
| GATGGAGTGCAAACATGGAG+AGG | - | chr1.4:77572337-77572356 | MS.gene061126:intron | 50.0% | |
| GGAAGGGTTGAAGTTGGATG+AGG | - | chr1.4:77572158-77572177 | MS.gene061126:CDS | 50.0% | |
| GGAGGGTCAACTAGAGTTCA+AGG | - | chr1.4:77571513-77571532 | MS.gene061126:intron | 50.0% | |
| GGATCTATGCAGGACCATCA+AGG | - | chr1.4:77572230-77572249 | MS.gene061126:intron | 50.0% | |
| GGGGCTGATGTTAGCATGAT+TGG | - | chr1.4:77570330-77570349 | MS.gene061126:CDS | 50.0% | |
| GTCTCCCAATACCTCCTTGA+TGG | + | chr1.4:77572247-77572266 | None:intergenic | 50.0% | |
| TCTATGCAGGACCATCAAGG+AGG | - | chr1.4:77572233-77572252 | MS.gene061126:intron | 50.0% | |
| TGAAGAGAGCAAGATGGAGG+AGG | - | chr1.4:77572674-77572693 | MS.gene061126:CDS | 50.0% | |
| TGGTGAGAGTAAGAAGGCTG+TGG | - | chr1.4:77572005-77572024 | MS.gene061126:CDS | 50.0% | |
| TTGGGTACTATTGCGAGGTC+TGG | - | chr1.4:77570276-77570295 | MS.gene061126:CDS | 50.0% | |
| ! | CAGGACCATCAAGGAGGTAT+TGG | - | chr1.4:77572239-77572258 | MS.gene061126:intron | 50.0% |
| ! | GAAGTTGGTTGATCTCAGCC+TGG | + | chr1.4:77569777-77569796 | None:intergenic | 50.0% |
| ! | TCTGGCTTACGCAACCAGAT+TGG | + | chr1.4:77571406-77571425 | None:intergenic | 50.0% |
| !! | CATGGAGGCATTACAAGCTG+GGG | - | chr1.4:77570311-77570330 | MS.gene061126:CDS | 50.0% |
| !! | GGGCTATGAGGTGCTTTTCA+TGG | - | chr1.4:77572062-77572081 | MS.gene061126:CDS | 50.0% |
| AGCTGGCTGCACACAATGGA+AGG | + | chr1.4:77570846-77570865 | None:intergenic | 55.0% | |
| ATGCCTCCACTGGAGGAAGT+AGG | - | chr1.4:77572648-77572667 | MS.gene061126:CDS | 55.0% | |
| CGCTGAAGAGAGCAAGATGG+AGG | - | chr1.4:77572671-77572690 | MS.gene061126:CDS | 55.0% | |
| GAGCTCATCCCTGAGTACCT+TGG | - | chr1.4:77571646-77571665 | MS.gene061126:intron | 55.0% | |
| GTGTAGCTGGCTGCACACAA+TGG | + | chr1.4:77570850-77570869 | None:intergenic | 55.0% | |
| TGAAGACATGCCTCCACTGG+AGG | - | chr1.4:77572641-77572660 | MS.gene061126:CDS | 55.0% | |
| !! | AGGCGCTGAAGAGAGCAAGA+TGG | - | chr1.4:77572668-77572687 | MS.gene061126:CDS | 55.0% |
| !! | GGCATTGGCATGACCAAAGC+AGG | - | chr1.4:77570081-77570100 | MS.gene061126:CDS | 55.0% |
| TCAGCGCCTACTTCCTCCAG+TGG | + | chr1.4:77572657-77572676 | None:intergenic | 60.0% | |
| !! | GCTGGGGCTCAGCATTGATG+AGG | - | chr1.4:77572602-77572621 | MS.gene061126:CDS | 60.0% |
| GCGCCTACTTCCTCCAGTGG+AGG | + | chr1.4:77572654-77572673 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 77569748 | 77572704 | 77569748 | ID=MS.gene061126 |
| chr1.4 | mRNA | 77569748 | 77572704 | 77569748 | ID=MS.gene061126.t1;Parent=MS.gene061126 |
| chr1.4 | exon | 77572582 | 77572704 | 77572582 | ID=MS.gene061126.t1.exon1;Parent=MS.gene061126.t1 |
| chr1.4 | CDS | 77572582 | 77572704 | 77572582 | ID=cds.MS.gene061126.t1;Parent=MS.gene061126.t1 |
| chr1.4 | exon | 77572350 | 77572491 | 77572350 | ID=MS.gene061126.t1.exon2;Parent=MS.gene061126.t1 |
| chr1.4 | CDS | 77572350 | 77572491 | 77572350 | ID=cds.MS.gene061126.t1;Parent=MS.gene061126.t1 |
| chr1.4 | exon | 77571910 | 77572190 | 77571910 | ID=MS.gene061126.t1.exon3;Parent=MS.gene061126.t1 |
| chr1.4 | CDS | 77571910 | 77572190 | 77571910 | ID=cds.MS.gene061126.t1;Parent=MS.gene061126.t1 |
| chr1.4 | exon | 77569748 | 77571298 | 77569748 | ID=MS.gene061126.t1.exon4;Parent=MS.gene061126.t1 |
| chr1.4 | CDS | 77569748 | 77571298 | 77569748 | ID=cds.MS.gene061126.t1;Parent=MS.gene061126.t1 |
| Gene Sequence |
| Protein sequence |
