Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60613.t1 | XP_024627140.1 | 98.9 | 699 | 7 | 1 | 1 | 698 | 6 | 704 | 0.00E+00 | 1230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60613.t1 | P51819 | 95.0 | 698 | 35 | 0 | 1 | 698 | 6 | 703 | 0.0e+00 | 1187.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60613.t1 | A0A2K3MY81 | 97.1 | 698 | 20 | 0 | 1 | 698 | 6 | 703 | 0.0e+00 | 1219.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061124 | MS.gene60613 | 0.922003 | 1.73E-88 | -1.69E-46 |
| MS.gene061126 | MS.gene60613 | 0.918819 | 9.73E-87 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60613.t1 | MTR_1g099840 | 96.567 | 699 | 8 | 2 | 1 | 698 | 6 | 689 | 0.0 | 1359 |
| MS.gene60613.t1 | MTR_6g452990 | 95.279 | 699 | 32 | 1 | 1 | 698 | 1 | 699 | 0.0 | 1273 |
| MS.gene60613.t1 | MTR_5g096430 | 87.143 | 700 | 87 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1147 |
| MS.gene60613.t1 | MTR_5g096460 | 87.143 | 700 | 87 | 2 | 1 | 698 | 1 | 699 | 0.0 | 1147 |
| MS.gene60613.t1 | MTR_1g025430 | 49.364 | 707 | 312 | 8 | 3 | 670 | 76 | 775 | 0.0 | 656 |
| MS.gene60613.t1 | MTR_5g097320 | 47.189 | 676 | 337 | 10 | 4 | 668 | 89 | 755 | 0.0 | 592 |
| MS.gene60613.t1 | MTR_0009s0390 | 44.774 | 708 | 364 | 10 | 4 | 697 | 81 | 775 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60613.t1 | AT5G52640 | 89.286 | 700 | 73 | 2 | 1 | 698 | 1 | 700 | 0.0 | 1206 |
| MS.gene60613.t1 | AT5G56000 | 84.429 | 700 | 106 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1135 |
| MS.gene60613.t1 | AT5G56030 | 85.286 | 700 | 100 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1129 |
| MS.gene60613.t1 | AT5G56010 | 85.143 | 700 | 101 | 3 | 1 | 698 | 1 | 699 | 0.0 | 1126 |
| MS.gene60613.t1 | AT5G56030 | 81.893 | 729 | 100 | 4 | 1 | 698 | 1 | 728 | 0.0 | 1114 |
| MS.gene60613.t1 | AT4G24190 | 50.071 | 705 | 308 | 8 | 3 | 670 | 75 | 772 | 0.0 | 650 |
| MS.gene60613.t1 | AT4G24190 | 50.071 | 705 | 308 | 8 | 3 | 670 | 75 | 772 | 0.0 | 650 |
| MS.gene60613.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene60613.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene60613.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 4 | 669 | 94 | 761 | 0.0 | 603 |
| MS.gene60613.t1 | AT2G04030 | 47.563 | 677 | 328 | 10 | 4 | 668 | 76 | 737 | 0.0 | 601 |
| MS.gene60613.t1 | AT2G04030 | 47.111 | 675 | 331 | 10 | 4 | 668 | 76 | 734 | 0.0 | 592 |
Find 163 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCCAAGAATTTGAAAT+TGG | 0.171299 | 1.2:+69597911 | MS.gene60613:CDS |
| CTTGGAGAAACTTAAGAAAA+AGG | 0.178941 | 1.2:+69598112 | MS.gene60613:CDS |
| TTCAGATTTGGTGAACAATT+TGG | 0.182629 | 1.2:+69596337 | MS.gene60613:intron |
| TTCCATCATACTCCTTTAAT+TGG | 0.201211 | 1.2:-69598184 | None:intergenic |
| CAAATCAAACGGTGCCCTTT+TGG | 0.205259 | 1.2:-69597622 | None:intergenic |
| TGCTGAAACCTTTGCATTCC+AGG | 0.239703 | 1.2:+69595834 | MS.gene60613:CDS |
| GATACCCAATTTCAAATTCT+TGG | 0.247197 | 1.2:-69597916 | None:intergenic |
| GTCTCCCAATACCTCCTTGA+TGG | 0.280128 | 1.2:-69598315 | None:intergenic |
| TTAAATTAATTTACCTGCTT+TGG | 0.287566 | 1.2:-69596178 | None:intergenic |
| AAGATGGAGGAGGTTGATTA+AGG | 0.291854 | 1.2:+69598755 | MS.gene60613:CDS |
| GTTAGCATGATTGGTCAATT+TGG | 0.295958 | 1.2:+69596419 | MS.gene60613:CDS |
| TGTTTGGTGACTGGTGAATA+TGG | 0.317819 | 1.2:+69598386 | MS.gene60613:CDS |
| CTTGGAGGAGAGAAGGATTA+AGG | 0.334725 | 1.2:+69597233 | MS.gene60613:CDS |
| TAGTCAGAACAGAGCTAAAT+TGG | 0.338612 | 1.2:+69597947 | MS.gene60613:CDS |
| GTATGCTGTTGGCCAATTAA+AGG | 0.342228 | 1.2:+69598172 | MS.gene60613:CDS |
| TGTGGAGAATTCTCCATTCT+TGG | 0.342762 | 1.2:+69598094 | MS.gene60613:CDS |
| CAACCCTGACAATGGCATTA+TGG | 0.344688 | 1.2:+69598502 | MS.gene60613:CDS |
| CATCAGACTTGTTCCTGATA+AGG | 0.350012 | 1.2:+69596113 | MS.gene60613:CDS |
| TCAGATTTGGTGAACAATTT+GGG | 0.350972 | 1.2:+69596338 | MS.gene60613:intron |
| ATGATGATGAACAATACATT+TGG | 0.355356 | 1.2:+69596501 | MS.gene60613:CDS |
| CAATGAGATTGCTGAGAATA+AGG | 0.366299 | 1.2:+69597863 | MS.gene60613:CDS |
| CGTTTGATTTGTTTGATACT+AGG | 0.369680 | 1.2:+69597634 | MS.gene60613:CDS |
| AATTCGATTTGAAAGCTTAA+CGG | 0.373408 | 1.2:+69596056 | MS.gene60613:CDS |
| TGTGAGGAGGGTGTTCATTA+TGG | 0.374488 | 1.2:+69597683 | MS.gene60613:CDS |
| CAGGACCATCAAGGAGGTAT+TGG | 0.383987 | 1.2:+69598310 | MS.gene60613:CDS |
| GTGGATCTTTCACTGTTACT+AGG | 0.388088 | 1.2:+69596537 | MS.gene60613:CDS |
| TTCTCAGTCCAAAGGTAGAT+AGG | 0.389672 | 1.2:-69597291 | None:intergenic |
| GAGACAGCACTCTTAACTTC+TGG | 0.389999 | 1.2:+69598596 | MS.gene60613:CDS |
| ATTCTACCAGCAAACATGTT+TGG | 0.393274 | 1.2:-69598635 | None:intergenic |
| TTCTCCAAGAATTTGAAATT+GGG | 0.395764 | 1.2:+69597912 | MS.gene60613:CDS |
| TTCTTAAGTTTCTCCAAGAA+TGG | 0.397153 | 1.2:-69598107 | None:intergenic |
| TTAGCTACCCTATCTACCTT+TGG | 0.400749 | 1.2:+69597283 | MS.gene60613:CDS |
| TGTGGATTCTCCATGTTGTT+TGG | 0.400821 | 1.2:+69598370 | MS.gene60613:CDS |
| TCGTCCTTGGTAATTTCCTC+TGG | 0.402183 | 1.2:-69597492 | None:intergenic |
| GTCTGGTACAAAGGAATTCA+TGG | 0.410673 | 1.2:+69596373 | MS.gene60613:CDS |
| ATAAGAGCATAACTAATGAT+TGG | 0.418044 | 1.2:+69597529 | MS.gene60613:CDS |
| CTATTCTCTTTGTTCCCAAA+AGG | 0.422208 | 1.2:+69597607 | MS.gene60613:CDS |
| TGGATCTTTCACTGTTACTA+GGG | 0.435649 | 1.2:+69596538 | MS.gene60613:CDS |
| CTTGTTCCTCAAGGAAGATC+AGG | 0.435854 | 1.2:+69596601 | MS.gene60613:CDS |
| TTCATGGAGGCATTACAAGC+TGG | 0.436032 | 1.2:+69596389 | MS.gene60613:CDS |
| TCCTCCATAATGCCATTGTC+AGG | 0.437528 | 1.2:-69598506 | None:intergenic |
| GAAGCTGGTATCTGCTACAA+AGG | 0.437907 | 1.2:+69598208 | MS.gene60613:CDS |
| TCTCCATGTTGTTTGGTGAC+TGG | 0.440901 | 1.2:+69598377 | MS.gene60613:CDS |
| TGATGATGAACAATACATTT+GGG | 0.441950 | 1.2:+69596502 | MS.gene60613:CDS |
| GATGATCCAAACATGTTTGC+TGG | 0.447088 | 1.2:+69598629 | MS.gene60613:CDS |
| TGTGTTATAGTTGGAATACT+TGG | 0.448442 | 1.2:+69597215 | MS.gene60613:intron |
| AGGACCATCAAGGAGGTATT+GGG | 0.450304 | 1.2:+69598311 | MS.gene60613:CDS |
| AGAGAAGAAGAAATCATTTG+AGG | 0.455191 | 1.2:+69598280 | MS.gene60613:CDS |
| GGCATTGGCATGACCAAAGC+AGG | 0.455988 | 1.2:+69596165 | MS.gene60613:CDS |
| TTGGGTACTATTGCGAGGTC+TGG | 0.456286 | 1.2:+69596356 | MS.gene60613:CDS |
| GGGGCTGATGTTAGCATGAT+TGG | 0.460557 | 1.2:+69596410 | MS.gene60613:CDS |
| TAAGAGCATAACTAATGATT+GGG | 0.461224 | 1.2:+69597530 | MS.gene60613:CDS |
| ACACTATCAATCATTGATAG+TGG | 0.464512 | 1.2:+69596144 | MS.gene60613:CDS |
| TGAGGATGTAGATGAAGAGA+AGG | 0.466876 | 1.2:+69597380 | MS.gene60613:CDS |
| GGAGGGTCAACTAGAGTTCA+AGG | 0.468530 | 1.2:+69597584 | MS.gene60613:CDS |
| TATTGCGAGGTCTGGTACAA+AGG | 0.469662 | 1.2:+69596364 | MS.gene60613:CDS |
| TGGAATACTTGGAGGAGAGA+AGG | 0.475060 | 1.2:+69597226 | MS.gene60613:CDS |
| CAGAATGAAAGAGGGTCAAA+AGG | 0.480856 | 1.2:+69598037 | MS.gene60613:CDS |
| GAAGTTAGATGAGGAGAGTG+AGG | 0.481965 | 1.2:+69598238 | MS.gene60613:CDS |
| CTGGTATCTGCTACAAAGGA+AGG | 0.485817 | 1.2:+69598212 | MS.gene60613:CDS |
| AATTCACAGGATGTTGAAGC+TGG | 0.485968 | 1.2:+69598655 | MS.gene60613:CDS |
| TATTCTCTTTGTTCCCAAAA+GGG | 0.486731 | 1.2:+69597608 | MS.gene60613:CDS |
| TGTTAAGCATTTCTCTGTGG+AGG | 0.488508 | 1.2:+69597566 | MS.gene60613:CDS |
| TCAATCATTGATAGTGGCAT+TGG | 0.489484 | 1.2:+69596150 | MS.gene60613:CDS |
| GGAAAAGGAAGGAGATGTTG+AGG | 0.493255 | 1.2:+69597362 | MS.gene60613:CDS |
| GTTATAGTTGGAATACTTGG+AGG | 0.493605 | 1.2:+69597218 | MS.gene60613:intron |
| GGAGTATGATGGAAAGAAGC+TGG | 0.494717 | 1.2:+69598193 | MS.gene60613:CDS |
| CTCTGTTCTGACTATCCTCA+TGG | 0.496112 | 1.2:-69597938 | None:intergenic |
| TGATGATGAGACTGAGAAGT+TGG | 0.496914 | 1.2:-69595867 | None:intergenic |
| TGATGAACCTAAGAAGGAAA+AGG | 0.503008 | 1.2:+69597347 | MS.gene60613:CDS |
| TGAGTACCTTGGATTTGTCA+AGG | 0.505185 | 1.2:+69597728 | MS.gene60613:CDS |
| AGATGAAGACATGCCTCCAC+TGG | 0.507205 | 1.2:+69598709 | MS.gene60613:CDS |
| GATGTCAATGGTGAACAACT+TGG | 0.511608 | 1.2:+69596560 | MS.gene60613:CDS |
| TCATGGAGGCATTACAAGCT+GGG | 0.511949 | 1.2:+69596390 | MS.gene60613:CDS |
| TTGACAAATCCAAGGTACTC+AGG | 0.512897 | 1.2:-69597726 | None:intergenic |
| TCAACAAGCAGAAACCAATC+TGG | 0.514259 | 1.2:+69597460 | MS.gene60613:CDS |
| ATGATTGGTCAATTTGGTGT+TGG | 0.514305 | 1.2:+69596425 | MS.gene60613:CDS |
| ACAAGTCTGATGAAAAGCTC+TGG | 0.517102 | 1.2:-69596102 | None:intergenic |
| AAGCAACACAAGGTCCTTCA+CGG | 0.522281 | 1.2:-69598567 | None:intergenic |
| CTAGTATCAAACAAATCAAA+CGG | 0.523583 | 1.2:-69597633 | None:intergenic |
| TAATGATTGGGAAGAACACT+TGG | 0.527807 | 1.2:+69597542 | MS.gene60613:CDS |
| TCTGGCTTACGCAACCAGAT+TGG | 0.530199 | 1.2:-69597474 | None:intergenic |
| GAATGAAGCATACTCGTCCT+TGG | 0.530562 | 1.2:-69597505 | None:intergenic |
| GAGTACCTTGGATTTGTCAA+GGG | 0.535864 | 1.2:+69597729 | MS.gene60613:CDS |
| AAGGATATTTACTATATCAC+TGG | 0.536155 | 1.2:+69598056 | MS.gene60613:CDS |
| TGGATTTGTCAAGGGTGTAG+TGG | 0.539035 | 1.2:+69597737 | MS.gene60613:CDS |
| GTTAAGCATTTCTCTGTGGA+GGG | 0.539665 | 1.2:+69597567 | MS.gene60613:CDS |
| ATTGTCAGGGTTGATCTCCA+TGG | 0.542460 | 1.2:-69598492 | None:intergenic |
| AGATGAGATGACAAGCTTGA+AGG | 0.542488 | 1.2:+69598004 | MS.gene60613:CDS |
| ACTGTTACTAGGGATGTCAA+TGG | 0.543110 | 1.2:+69596548 | MS.gene60613:CDS |
| GAGCTCATCCCTGAGTACCT+TGG | 0.550986 | 1.2:+69597717 | MS.gene60613:CDS |
| TGAGGATGATGAACCTAAGA+AGG | 0.554886 | 1.2:+69597341 | MS.gene60613:CDS |
| AGTTGTCTCGGATAGGATTG+TGG | 0.557675 | 1.2:+69598352 | MS.gene60613:CDS |
| TTATGGAGGAGCTGAGAAAG+AGG | 0.558690 | 1.2:+69598519 | MS.gene60613:CDS |
| TGAAGAGAGCAAGATGGAGG+AGG | 0.560190 | 1.2:+69598745 | MS.gene60613:CDS |
| CTATGTTACCAGAATGAAAG+AGG | 0.562239 | 1.2:+69598028 | MS.gene60613:CDS |
| TCTCAGTCCAAAGGTAGATA+GGG | 0.562769 | 1.2:-69597290 | None:intergenic |
| AGGCGCTGAAGAGAGCAAGA+TGG | 0.563156 | 1.2:+69598739 | MS.gene60613:CDS |
| AGTTGAGAAAGTAGTTGTCT+CGG | 0.565740 | 1.2:+69598340 | MS.gene60613:CDS |
| TTGAGAGATAGCAGCATGAG+TGG | 0.568101 | 1.2:+69598449 | MS.gene60613:CDS |
| TAAGATTACCTTGTTCCTCA+AGG | 0.569189 | 1.2:+69596592 | MS.gene60613:CDS |
| ATTCACAGGATGTTGAAGCT+GGG | 0.569221 | 1.2:+69598656 | MS.gene60613:CDS |
| CTGATCTTCCTTGAGGAACA+AGG | 0.572292 | 1.2:-69596600 | None:intergenic |
| CAAACATGTTTGGATCATCC+AGG | 0.572455 | 1.2:-69598625 | None:intergenic |
| GGCCAATTAAAGGAGTATGA+TGG | 0.574049 | 1.2:+69598182 | MS.gene60613:CDS |
| GAAGTTGGTTGATCTCAGCC+TGG | 0.575545 | 1.2:-69595852 | None:intergenic |
| TGGTGACTGGTGAATATGGA+TGG | 0.578088 | 1.2:+69598390 | MS.gene60613:CDS |
| AATCATTTGAGGATCTATGC+AGG | 0.578345 | 1.2:+69598291 | MS.gene60613:CDS |
| TGGTGAGAGTAAGAAGGCTG+TGG | 0.582985 | 1.2:+69598076 | MS.gene60613:CDS |
| TGTTTGCTGGTAGAATTCAC+AGG | 0.586334 | 1.2:+69598642 | MS.gene60613:CDS |
| GGAAGGGTTGAAGTTAGATG+AGG | 0.586449 | 1.2:+69598229 | MS.gene60613:CDS |
| TATCACTGGTGAGAGTAAGA+AGG | 0.590152 | 1.2:+69598070 | MS.gene60613:CDS |
| AATGGTGAACAACTTGGAAG+AGG | 0.590183 | 1.2:+69596566 | MS.gene60613:CDS |
| AGAAAGTAGTTGTCTCGGAT+AGG | 0.591723 | 1.2:+69598345 | MS.gene60613:CDS |
| GGCTGTTAAGCATTTCTCTG+TGG | 0.595552 | 1.2:+69597563 | MS.gene60613:CDS |
| ATGCCTCCACTGGAGGAAGT+AGG | 0.596007 | 1.2:+69598719 | MS.gene60613:CDS |
| GGATCTATGCAGGACCATCA+AGG | 0.596813 | 1.2:+69598301 | MS.gene60613:CDS |
| AGCATTGATGAGGAAGAGAC+TGG | 0.596838 | 1.2:+69598683 | MS.gene60613:CDS |
| CGCTGAAGAGAGCAAGATGG+AGG | 0.597067 | 1.2:+69598742 | MS.gene60613:CDS |
| TACATTTGGGAATCACAAGC+TGG | 0.598338 | 1.2:+69596515 | MS.gene60613:CDS |
| GACTGAGAAGACTACTGAGA+AGG | 0.602168 | 1.2:+69597305 | MS.gene60613:CDS |
| TTCACAGGATGTTGAAGCTG+GGG | 0.602382 | 1.2:+69598657 | MS.gene60613:CDS |
| ATATGGATGGAGTGCAAACA+TGG | 0.604123 | 1.2:+69598403 | MS.gene60613:CDS |
| CAGTAGTCTTCTCAGTCCAA+AGG | 0.604801 | 1.2:-69597299 | None:intergenic |
| TGACAAATCCAAGGTACTCA+GGG | 0.611848 | 1.2:-69597725 | None:intergenic |
| TCAAGGAGGTTTCTCATGAG+TGG | 0.614015 | 1.2:+69597430 | MS.gene60613:CDS |
| ATATCAAGCTGTATGTGAGG+AGG | 0.615471 | 1.2:+69597670 | MS.gene60613:CDS |
| GATCTCAGCCTGGAATGCAA+AGG | 0.619501 | 1.2:-69595842 | None:intergenic |
| GAAGGAGATCAGTGATGATG+AGG | 0.626522 | 1.2:+69597323 | MS.gene60613:CDS |
| GAACCTAAGAAGGAAAAGGA+AGG | 0.626940 | 1.2:+69597351 | MS.gene60613:CDS |
| TCTCAATGCACTTCTTCACA+AGG | 0.627680 | 1.2:-69597836 | None:intergenic |
| GCGCCTACTTCCTCCAGTGG+AGG | 0.628820 | 1.2:-69598722 | None:intergenic |
| TGGTATCTGCTACAAAGGAA+GGG | 0.629588 | 1.2:+69598213 | MS.gene60613:CDS |
| TATCAAGCTGTATGTGAGGA+GGG | 0.629910 | 1.2:+69597671 | MS.gene60613:CDS |
| TATGGAGGAGCTGAGAAAGA+GGG | 0.630167 | 1.2:+69598520 | MS.gene60613:CDS |
| TCAGCGCCTACTTCCTCCAG+TGG | 0.632812 | 1.2:-69598725 | None:intergenic |
| CATGGAGGCATTACAAGCTG+GGG | 0.633123 | 1.2:+69596391 | MS.gene60613:CDS |
| CCTCCATAATGCCATTGTCA+GGG | 0.633801 | 1.2:-69598505 | None:intergenic |
| TCACCAGTCACCAAACAACA+TGG | 0.634548 | 1.2:-69598380 | None:intergenic |
| ATGGAGATCAACCCTGACAA+TGG | 0.636528 | 1.2:+69598494 | MS.gene60613:CDS |
| CATGTCTAGCAAGAAGACCA+TGG | 0.639969 | 1.2:+69598475 | MS.gene60613:CDS |
| ATTTGGGAATCACAAGCTGG+TGG | 0.641832 | 1.2:+69596518 | MS.gene60613:CDS |
| CCCTGACAATGGCATTATGG+AGG | 0.643069 | 1.2:+69598505 | MS.gene60613:CDS |
| GATGGAGTGCAAACATGGAG+AGG | 0.643902 | 1.2:+69598408 | MS.gene60613:CDS |
| TAAGAATGATAAGTCCGTGA+AGG | 0.645850 | 1.2:+69598553 | MS.gene60613:CDS |
| GCTGGGGCTCAGCATTGATG+AGG | 0.646731 | 1.2:+69598673 | MS.gene60613:CDS |
| CTACACCCTTGACAAATCCA+AGG | 0.647229 | 1.2:-69597734 | None:intergenic |
| GCTATTGACGAGTATGCTGT+TGG | 0.649715 | 1.2:+69598161 | MS.gene60613:CDS |
| TGTATACCTGATCTTCCTTG+AGG | 0.654298 | 1.2:-69596607 | None:intergenic |
| ACAATTTGGGTACTATTGCG+AGG | 0.656937 | 1.2:+69596351 | MS.gene60613:CDS |
| ATCTCACGAGAGATATTGAG+TGG | 0.657230 | 1.2:-69597774 | None:intergenic |
| AATCTGGTTGCGTAAGCCAG+AGG | 0.658174 | 1.2:+69597476 | MS.gene60613:CDS |
| ACAATATCAAGCTGTATGTG+AGG | 0.660885 | 1.2:+69597667 | MS.gene60613:CDS |
| TGAAGACATGCCTCCACTGG+AGG | 0.665463 | 1.2:+69598712 | MS.gene60613:CDS |
| AAACATGGAGAGGATCATGA+AGG | 0.667122 | 1.2:+69598418 | MS.gene60613:CDS |
| TTTGAAATTGGGTATCCATG+AGG | 0.672057 | 1.2:+69597923 | MS.gene60613:CDS |
| TATGTTACCAGAATGAAAGA+GGG | 0.686570 | 1.2:+69598029 | MS.gene60613:CDS |
| TCTCAAACAGAAGCAACACA+AGG | 0.697952 | 1.2:-69598577 | None:intergenic |
| ATTGATGAGGAAGAGACTGG+TGG | 0.705591 | 1.2:+69598686 | MS.gene60613:CDS |
| TAAGCCAGAGGAAATTACCA+AGG | 0.721489 | 1.2:+69597488 | MS.gene60613:CDS |
| CATTGCTGATGAGTTCACGA+AGG | 0.740684 | 1.2:-69595918 | None:intergenic |
| TCTATGCAGGACCATCAAGG+AGG | 0.752495 | 1.2:+69598304 | MS.gene60613:CDS |
| TGGTACAAAGGAATTCATGG+AGG | 0.756490 | 1.2:+69596376 | MS.gene60613:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTCATTAC+AGG | + | chr1.2:69596023-69596042 | MS.gene60613:intron | 10.0% |
| !! | GACATTATTATAATTTGAAA+CGG | + | chr1.2:69597070-69597089 | MS.gene60613:intron | 15.0% |
| !! | TGATTTGAATTATTATTAGT+TGG | + | chr1.2:69597023-69597042 | MS.gene60613:intron | 15.0% |
| !!! | ATTATTTATTTTCTTTCCAA+AGG | - | chr1.2:69596802-69596821 | None:intergenic | 15.0% |
| !! | AAAATTATACAATACAACCA+TGG | - | chr1.2:69597133-69597152 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAGAAGATCA+AGG | + | chr1.2:69597413-69597432 | MS.gene60613:CDS | 20.0% |
| !! | AGACAATTTGAGAAATTAAA+TGG | + | chr1.2:69596674-69596693 | MS.gene60613:intron | 20.0% |
| !! | ATTATACGTATCAAAATTCA+AGG | - | chr1.2:69596899-69596918 | None:intergenic | 20.0% |
| !! | GTTTGTAATTCATGTTTAAT+GGG | + | chr1.2:69596299-69596318 | MS.gene60613:intron | 20.0% |
| !! | TGTTTGTAATTCATGTTTAA+TGG | + | chr1.2:69596298-69596317 | MS.gene60613:intron | 20.0% |
| !! | TTAAATTAATTTACCTGCTT+TGG | - | chr1.2:69596181-69596200 | None:intergenic | 20.0% |
| ! | AAGGATATTTACTATATCAC+TGG | + | chr1.2:69598056-69598075 | MS.gene60613:CDS | 25.0% |
| ! | CTAGTATCAAACAAATCAAA+CGG | - | chr1.2:69597636-69597655 | None:intergenic | 25.0% |
| ! | GATTCAAACAACAAGAAAAT+TGG | - | chr1.2:69596979-69596998 | None:intergenic | 25.0% |
| ! | TAAATACTAATAACCATGAG+TGG | - | chr1.2:69596737-69596756 | None:intergenic | 25.0% |
| ! | TTGGAGAAACTTAAGAAAAA+GGG | + | chr1.2:69598113-69598132 | MS.gene60613:CDS | 25.0% |
| !! | AATTCGATTTGAAAGCTTAA+CGG | + | chr1.2:69596056-69596075 | MS.gene60613:CDS | 25.0% |
| !! | ATAAGAGCATAACTAATGAT+TGG | + | chr1.2:69597529-69597548 | MS.gene60613:CDS | 25.0% |
| !! | ATGATGATGAACAATACATT+TGG | + | chr1.2:69596501-69596520 | MS.gene60613:CDS | 25.0% |
| !! | TAAGAGCATAACTAATGATT+GGG | + | chr1.2:69597530-69597549 | MS.gene60613:CDS | 25.0% |
| !! | TGATGATGAACAATACATTT+GGG | + | chr1.2:69596502-69596521 | MS.gene60613:CDS | 25.0% |
| !! | TTCTCCAAGAATTTGAAATT+GGG | + | chr1.2:69597912-69597931 | MS.gene60613:CDS | 25.0% |
| !! | TTTCTCCAAGAATTTGAAAT+TGG | + | chr1.2:69597911-69597930 | MS.gene60613:CDS | 25.0% |
| !!! | ATAAGATTTTGAAGGTGATT+AGG | + | chr1.2:69597808-69597827 | MS.gene60613:CDS | 25.0% |
| !!! | TGATTTATTGACTTTCTTGT+TGG | + | chr1.2:69597191-69597210 | MS.gene60613:intron | 25.0% |
| !!! | TTGTTTGAATCACTTTTGTT+CGG | + | chr1.2:69596988-69597007 | MS.gene60613:intron | 25.0% |
| !!! | TTTTTTTTCATTACAGGCTT+TGG | + | chr1.2:69596029-69596048 | MS.gene60613:intron | 25.0% |
| ACACTATCAATCATTGATAG+TGG | + | chr1.2:69596144-69596163 | MS.gene60613:CDS | 30.0% | |
| AGAGAAGAAGAAATCATTTG+AGG | + | chr1.2:69598280-69598299 | MS.gene60613:CDS | 30.0% | |
| AGATACCATTCTACAAAAAG+TGG | + | chr1.2:69597981-69598000 | MS.gene60613:CDS | 30.0% | |
| ATTGACACAAAAGGAAAAGA+GGG | - | chr1.2:69597164-69597183 | None:intergenic | 30.0% | |
| CAAACAACAAGAAAATTGGT+TGG | - | chr1.2:69596975-69596994 | None:intergenic | 30.0% | |
| CATTTGTCTATTGACACAAA+AGG | - | chr1.2:69597173-69597192 | None:intergenic | 30.0% | |
| CTTGGAGAAACTTAAGAAAA+AGG | + | chr1.2:69598112-69598131 | MS.gene60613:CDS | 30.0% | |
| GAAAAAAAAGAAGATCAAGG+AGG | + | chr1.2:69597416-69597435 | MS.gene60613:CDS | 30.0% | |
| GATACCCAATTTCAAATTCT+TGG | - | chr1.2:69597919-69597938 | None:intergenic | 30.0% | |
| TAAGTAAGAAAAACTCACGT+CGG | - | chr1.2:69595947-69595966 | None:intergenic | 30.0% | |
| TATGATTCAACACTAACCTT+TGG | + | chr1.2:69596783-69596802 | MS.gene60613:intron | 30.0% | |
| TATGTTACCAGAATGAAAGA+GGG | + | chr1.2:69598029-69598048 | MS.gene60613:CDS | 30.0% | |
| TATTCTCTTTGTTCCCAAAA+GGG | + | chr1.2:69597608-69597627 | MS.gene60613:CDS | 30.0% | |
| TATTGACACAAAAGGAAAAG+AGG | - | chr1.2:69597165-69597184 | None:intergenic | 30.0% | |
| TCTCTAGACTCATAATCATA+TGG | - | chr1.2:69596700-69596719 | None:intergenic | 30.0% | |
| TGTGTTATAGTTGGAATACT+TGG | + | chr1.2:69597215-69597234 | MS.gene60613:intron | 30.0% | |
| TTCCATCATACTCCTTTAAT+TGG | - | chr1.2:69598187-69598206 | None:intergenic | 30.0% | |
| TTCTTAAGTTTCTCCAAGAA+TGG | - | chr1.2:69598110-69598129 | None:intergenic | 30.0% | |
| ! | AAATTGTCAAAAAGTGTAGC+TGG | - | chr1.2:69596945-69596964 | None:intergenic | 30.0% |
| ! | GCAACAGAATAAGATTTTGA+AGG | + | chr1.2:69597800-69597819 | MS.gene60613:CDS | 30.0% |
| ! | GTTGTTGATTGTTTCAGATT+TGG | + | chr1.2:69596325-69596344 | MS.gene60613:intron | 30.0% |
| !! | CGTTTGATTTGTTTGATACT+AGG | + | chr1.2:69597634-69597653 | MS.gene60613:CDS | 30.0% |
| !! | TCAGATTTGGTGAACAATTT+GGG | + | chr1.2:69596338-69596357 | MS.gene60613:intron | 30.0% |
| !! | TTCAGATTTGGTGAACAATT+TGG | + | chr1.2:69596337-69596356 | MS.gene60613:intron | 30.0% |
| AATCATTTGAGGATCTATGC+AGG | + | chr1.2:69598291-69598310 | MS.gene60613:CDS | 35.0% | |
| ACAATATCAAGCTGTATGTG+AGG | + | chr1.2:69597667-69597686 | MS.gene60613:CDS | 35.0% | |
| ACTTAAGAAAAAGGGCTATG+AGG | + | chr1.2:69598121-69598140 | MS.gene60613:CDS | 35.0% | |
| AGTTGAGAAAGTAGTTGTCT+CGG | + | chr1.2:69598340-69598359 | MS.gene60613:CDS | 35.0% | |
| ATTCTACCAGCAAACATGTT+TGG | - | chr1.2:69598638-69598657 | None:intergenic | 35.0% | |
| CAATGAGATTGCTGAGAATA+AGG | + | chr1.2:69597863-69597882 | MS.gene60613:CDS | 35.0% | |
| CTATGTTACCAGAATGAAAG+AGG | + | chr1.2:69598028-69598047 | MS.gene60613:CDS | 35.0% | |
| CTATTCTCTTTGTTCCCAAA+AGG | + | chr1.2:69597607-69597626 | MS.gene60613:CDS | 35.0% | |
| GAATCTTGATGTGATAACCA+TGG | + | chr1.2:69597113-69597132 | MS.gene60613:intron | 35.0% | |
| GTTATAGTTGGAATACTTGG+AGG | + | chr1.2:69597218-69597237 | MS.gene60613:intron | 35.0% | |
| TAAGAATGATAAGTCCGTGA+AGG | + | chr1.2:69598553-69598572 | MS.gene60613:CDS | 35.0% | |
| TAAGATTACCTTGTTCCTCA+AGG | + | chr1.2:69596592-69596611 | MS.gene60613:CDS | 35.0% | |
| TAATGATTGGGAAGAACACT+TGG | + | chr1.2:69597542-69597561 | MS.gene60613:CDS | 35.0% | |
| TAGTCAGAACAGAGCTAAAT+TGG | + | chr1.2:69597947-69597966 | MS.gene60613:CDS | 35.0% | |
| TATGAGTCTAGAGACTAAGT+TGG | + | chr1.2:69596706-69596725 | MS.gene60613:intron | 35.0% | |
| TGATGAACCTAAGAAGGAAA+AGG | + | chr1.2:69597347-69597366 | MS.gene60613:CDS | 35.0% | |
| TGGATCTTTCACTGTTACTA+GGG | + | chr1.2:69596538-69596557 | MS.gene60613:CDS | 35.0% | |
| ! | CTTGTTGGTTGTGTTATAGT+TGG | + | chr1.2:69597206-69597225 | MS.gene60613:intron | 35.0% |
| ! | GTTAGCATGATTGGTCAATT+TGG | + | chr1.2:69596419-69596438 | MS.gene60613:CDS | 35.0% |
| ! | TCTCTAGTGTGCATCTATTT+TGG | + | chr1.2:69596861-69596880 | MS.gene60613:intron | 35.0% |
| ! | TTTGAAATTGGGTATCCATG+AGG | + | chr1.2:69597923-69597942 | MS.gene60613:CDS | 35.0% |
| !! | ATCACTTTTGTTCGGTCATT+TGG | + | chr1.2:69596996-69597015 | MS.gene60613:intron | 35.0% |
| !! | ATGATTGGTCAATTTGGTGT+TGG | + | chr1.2:69596425-69596444 | MS.gene60613:CDS | 35.0% |
| !! | CAACACTTTTTACAGCAACA+AGG | + | chr1.2:69595888-69595907 | MS.gene60613:CDS | 35.0% |
| !! | TCAATCATTGATAGTGGCAT+TGG | + | chr1.2:69596150-69596169 | MS.gene60613:CDS | 35.0% |
| !!! | AGTGTTTTGTTAGCCTTATC+AGG | - | chr1.2:69596129-69596148 | None:intergenic | 35.0% |
| !!! | CATCTCCACTTTTTGTAGAA+TGG | - | chr1.2:69597989-69598008 | None:intergenic | 35.0% |
| AAACATGGAGAGGATCATGA+AGG | + | chr1.2:69598418-69598437 | MS.gene60613:CDS | 40.0% | |
| AATGGTGAACAACTTGGAAG+AGG | + | chr1.2:69596566-69596585 | MS.gene60613:CDS | 40.0% | |
| AATTCACAGGATGTTGAAGC+TGG | + | chr1.2:69598655-69598674 | MS.gene60613:CDS | 40.0% | |
| ACAAGTCTGATGAAAAGCTC+TGG | - | chr1.2:69596105-69596124 | None:intergenic | 40.0% | |
| ACAATTTGGGTACTATTGCG+AGG | + | chr1.2:69596351-69596370 | MS.gene60613:CDS | 40.0% | |
| ACTGTTACTAGGGATGTCAA+TGG | + | chr1.2:69596548-69596567 | MS.gene60613:CDS | 40.0% | |
| AGAAAGTAGTTGTCTCGGAT+AGG | + | chr1.2:69598345-69598364 | MS.gene60613:CDS | 40.0% | |
| AGATGAGATGACAAGCTTGA+AGG | + | chr1.2:69598004-69598023 | MS.gene60613:CDS | 40.0% | |
| ATATCAAGCTGTATGTGAGG+AGG | + | chr1.2:69597670-69597689 | MS.gene60613:CDS | 40.0% | |
| ATATGGATGGAGTGCAAACA+TGG | + | chr1.2:69598403-69598422 | MS.gene60613:CDS | 40.0% | |
| ATCTCACGAGAGATATTGAG+TGG | - | chr1.2:69597777-69597796 | None:intergenic | 40.0% | |
| ATTCACAGGATGTTGAAGCT+GGG | + | chr1.2:69598656-69598675 | MS.gene60613:CDS | 40.0% | |
| CAAACATGTTTGGATCATCC+AGG | - | chr1.2:69598628-69598647 | None:intergenic | 40.0% | |
| CAGAATGAAAGAGGGTCAAA+AGG | + | chr1.2:69598037-69598056 | MS.gene60613:CDS | 40.0% | |
| GAACCTAAGAAGGAAAAGGA+AGG | + | chr1.2:69597351-69597370 | MS.gene60613:CDS | 40.0% | |
| GAGTACCTTGGATTTGTCAA+GGG | + | chr1.2:69597729-69597748 | MS.gene60613:CDS | 40.0% | |
| GATGATCCAAACATGTTTGC+TGG | + | chr1.2:69598629-69598648 | MS.gene60613:CDS | 40.0% | |
| GATGTCAATGGTGAACAACT+TGG | + | chr1.2:69596560-69596579 | MS.gene60613:CDS | 40.0% | |
| GTATGCTGTTGGCCAATTAA+AGG | + | chr1.2:69598172-69598191 | MS.gene60613:CDS | 40.0% | |
| GTCTGGTACAAAGGAATTCA+TGG | + | chr1.2:69596373-69596392 | MS.gene60613:CDS | 40.0% | |
| GTGGATCTTTCACTGTTACT+AGG | + | chr1.2:69596537-69596556 | MS.gene60613:CDS | 40.0% | |
| GTTAAGCATTTCTCTGTGGA+GGG | + | chr1.2:69597567-69597586 | MS.gene60613:CDS | 40.0% | |
| TAAGCCAGAGGAAATTACCA+AGG | + | chr1.2:69597488-69597507 | MS.gene60613:CDS | 40.0% | |
| TACATTTGGGAATCACAAGC+TGG | + | chr1.2:69596515-69596534 | MS.gene60613:CDS | 40.0% | |
| TATCAAGCTGTATGTGAGGA+GGG | + | chr1.2:69597671-69597690 | MS.gene60613:CDS | 40.0% | |
| TATCACTGGTGAGAGTAAGA+AGG | + | chr1.2:69598070-69598089 | MS.gene60613:CDS | 40.0% | |
| TCAACAAGCAGAAACCAATC+TGG | + | chr1.2:69597460-69597479 | MS.gene60613:CDS | 40.0% | |
| TCTCAAACAGAAGCAACACA+AGG | - | chr1.2:69598580-69598599 | None:intergenic | 40.0% | |
| TCTCAATGCACTTCTTCACA+AGG | - | chr1.2:69597839-69597858 | None:intergenic | 40.0% | |
| TCTCAGTCCAAAGGTAGATA+GGG | - | chr1.2:69597293-69597312 | None:intergenic | 40.0% | |
| TGAGGATGATGAACCTAAGA+AGG | + | chr1.2:69597341-69597360 | MS.gene60613:CDS | 40.0% | |
| TGAGGATGTAGATGAAGAGA+AGG | + | chr1.2:69597380-69597399 | MS.gene60613:CDS | 40.0% | |
| TGAGTACCTTGGATTTGTCA+AGG | + | chr1.2:69597728-69597747 | MS.gene60613:CDS | 40.0% | |
| TGGTACAAAGGAATTCATGG+AGG | + | chr1.2:69596376-69596395 | MS.gene60613:CDS | 40.0% | |
| TGGTATCTGCTACAAAGGAA+GGG | + | chr1.2:69598213-69598232 | MS.gene60613:CDS | 40.0% | |
| TGTATACCTGATCTTCCTTG+AGG | - | chr1.2:69596610-69596629 | None:intergenic | 40.0% | |
| TGTGGAGAATTCTCCATTCT+TGG | + | chr1.2:69598094-69598113 | MS.gene60613:CDS | 40.0% | |
| TGTGGATTCTCCATGTTGTT+TGG | + | chr1.2:69598370-69598389 | MS.gene60613:CDS | 40.0% | |
| TGTTAAGCATTTCTCTGTGG+AGG | + | chr1.2:69597566-69597585 | MS.gene60613:CDS | 40.0% | |
| TTAGCTACCCTATCTACCTT+TGG | + | chr1.2:69597283-69597302 | MS.gene60613:CDS | 40.0% | |
| TTCTCAGTCCAAAGGTAGAT+AGG | - | chr1.2:69597294-69597313 | None:intergenic | 40.0% | |
| ! | AAATCAAACGGTGCCCTTTT+GGG | - | chr1.2:69597624-69597643 | None:intergenic | 40.0% |
| ! | CATCAGACTTGTTCCTGATA+AGG | + | chr1.2:69596113-69596132 | MS.gene60613:CDS | 40.0% |
| ! | CTTTTGACCCTCTTTCATTC+TGG | - | chr1.2:69598039-69598058 | None:intergenic | 40.0% |
| ! | GGCCAATTAAAGGAGTATGA+TGG | + | chr1.2:69598182-69598201 | MS.gene60613:CDS | 40.0% |
| ! | TCTCCTTCCTTTTCCTTCTT+AGG | - | chr1.2:69597357-69597376 | None:intergenic | 40.0% |
| ! | TGACAAATCCAAGGTACTCA+GGG | - | chr1.2:69597728-69597747 | None:intergenic | 40.0% |
| ! | TGATGATGAGACTGAGAAGT+TGG | - | chr1.2:69595870-69595889 | None:intergenic | 40.0% |
| ! | TGTCAGTGTTGTTGTGTGTT+TGG | + | chr1.2:69596269-69596288 | MS.gene60613:intron | 40.0% |
| ! | TGTTTGCTGGTAGAATTCAC+AGG | + | chr1.2:69598642-69598661 | MS.gene60613:CDS | 40.0% |
| ! | TGTTTGGTGACTGGTGAATA+TGG | + | chr1.2:69598386-69598405 | MS.gene60613:CDS | 40.0% |
| ! | TTGACAAATCCAAGGTACTC+AGG | - | chr1.2:69597729-69597748 | None:intergenic | 40.0% |
| !!! | CTTAACTTCTGGTTTTAGCC+TGG | + | chr1.2:69598607-69598626 | MS.gene60613:CDS | 40.0% |
| AAGCAACACAAGGTCCTTCA+CGG | - | chr1.2:69598570-69598589 | None:intergenic | 45.0% | |
| AGTTGTCTCGGATAGGATTG+TGG | + | chr1.2:69598352-69598371 | MS.gene60613:CDS | 45.0% | |
| ATGGAGATCAACCCTGACAA+TGG | + | chr1.2:69598494-69598513 | MS.gene60613:CDS | 45.0% | |
| ATTGATGAGGAAGAGACTGG+TGG | + | chr1.2:69598686-69598705 | MS.gene60613:CDS | 45.0% | |
| ATTTGGGAATCACAAGCTGG+TGG | + | chr1.2:69596518-69596537 | MS.gene60613:CDS | 45.0% | |
| CAACCCTGACAATGGCATTA+TGG | + | chr1.2:69598502-69598521 | MS.gene60613:CDS | 45.0% | |
| CAGTAGTCTTCTCAGTCCAA+AGG | - | chr1.2:69597302-69597321 | None:intergenic | 45.0% | |
| CATGTCTAGCAAGAAGACCA+TGG | + | chr1.2:69598475-69598494 | MS.gene60613:CDS | 45.0% | |
| CATTGCTGATGAGTTCACGA+AGG | - | chr1.2:69595921-69595940 | None:intergenic | 45.0% | |
| CCTCCATAATGCCATTGTCA+GGG | - | chr1.2:69598508-69598527 | None:intergenic | 45.0% | |
| CTACACCCTTGACAAATCCA+AGG | - | chr1.2:69597737-69597756 | None:intergenic | 45.0% | |
| CTCTGTTCTGACTATCCTCA+TGG | - | chr1.2:69597941-69597960 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGAGGAACA+AGG | - | chr1.2:69596603-69596622 | None:intergenic | 45.0% | |
| CTGGTATCTGCTACAAAGGA+AGG | + | chr1.2:69598212-69598231 | MS.gene60613:CDS | 45.0% | |
| CTTGGAGGAGAGAAGGATTA+AGG | + | chr1.2:69597233-69597252 | MS.gene60613:CDS | 45.0% | |
| CTTGTTCCTCAAGGAAGATC+AGG | + | chr1.2:69596601-69596620 | MS.gene60613:CDS | 45.0% | |
| GAAGCTGGTATCTGCTACAA+AGG | + | chr1.2:69598208-69598227 | MS.gene60613:CDS | 45.0% | |
| GAAGTTAGATGAGGAGAGTG+AGG | + | chr1.2:69598238-69598257 | MS.gene60613:CDS | 45.0% | |
| GAATGAAGCATACTCGTCCT+TGG | - | chr1.2:69597508-69597527 | None:intergenic | 45.0% | |
| GACTGAGAAGACTACTGAGA+AGG | + | chr1.2:69597305-69597324 | MS.gene60613:CDS | 45.0% | |
| GAGACAGCACTCTTAACTTC+TGG | + | chr1.2:69598596-69598615 | MS.gene60613:CDS | 45.0% | |
| GCTATTGACGAGTATGCTGT+TGG | + | chr1.2:69598161-69598180 | MS.gene60613:CDS | 45.0% | |
| GGAAAAGGAAGGAGATGTTG+AGG | + | chr1.2:69597362-69597381 | MS.gene60613:CDS | 45.0% | |
| GGAAGGGTTGAAGTTAGATG+AGG | + | chr1.2:69598229-69598248 | MS.gene60613:CDS | 45.0% | |
| GGCTGTTAAGCATTTCTCTG+TGG | + | chr1.2:69597563-69597582 | MS.gene60613:CDS | 45.0% | |
| TATGGAGGAGCTGAGAAAGA+GGG | + | chr1.2:69598520-69598539 | MS.gene60613:CDS | 45.0% | |
| TATTGCGAGGTCTGGTACAA+AGG | + | chr1.2:69596364-69596383 | MS.gene60613:CDS | 45.0% | |
| TCAAGGAGGTTTCTCATGAG+TGG | + | chr1.2:69597430-69597449 | MS.gene60613:CDS | 45.0% | |
| TCACCAGTCACCAAACAACA+TGG | - | chr1.2:69598383-69598402 | None:intergenic | 45.0% | |
| TCCTCCATAATGCCATTGTC+AGG | - | chr1.2:69598509-69598528 | None:intergenic | 45.0% | |
| TGCTGAAACCTTTGCATTCC+AGG | + | chr1.2:69595834-69595853 | MS.gene60613:CDS | 45.0% | |
| TGGAATACTTGGAGGAGAGA+AGG | + | chr1.2:69597226-69597245 | MS.gene60613:CDS | 45.0% | |
| TGGTGACTGGTGAATATGGA+TGG | + | chr1.2:69598390-69598409 | MS.gene60613:CDS | 45.0% | |
| TTATGGAGGAGCTGAGAAAG+AGG | + | chr1.2:69598519-69598538 | MS.gene60613:CDS | 45.0% | |
| TTCACAGGATGTTGAAGCTG+GGG | + | chr1.2:69598657-69598676 | MS.gene60613:CDS | 45.0% | |
| TTGAGAGATAGCAGCATGAG+TGG | + | chr1.2:69598449-69598468 | MS.gene60613:CDS | 45.0% | |
| ! | ATTGTCAGGGTTGATCTCCA+TGG | - | chr1.2:69598495-69598514 | None:intergenic | 45.0% |
| ! | CAAATCAAACGGTGCCCTTT+TGG | - | chr1.2:69597625-69597644 | None:intergenic | 45.0% |
| ! | GAAGGAGATCAGTGATGATG+AGG | + | chr1.2:69597323-69597342 | MS.gene60613:CDS | 45.0% |
| ! | GGAGTATGATGGAAAGAAGC+TGG | + | chr1.2:69598193-69598212 | MS.gene60613:CDS | 45.0% |
| ! | TCGTCCTTGGTAATTTCCTC+TGG | - | chr1.2:69597495-69597514 | None:intergenic | 45.0% |
| ! | TCTCCATGTTGTTTGGTGAC+TGG | + | chr1.2:69598377-69598396 | MS.gene60613:CDS | 45.0% |
| ! | TGGATTTGTCAAGGGTGTAG+TGG | + | chr1.2:69597737-69597756 | MS.gene60613:CDS | 45.0% |
| !! | AGCATTGATGAGGAAGAGAC+TGG | + | chr1.2:69598683-69598702 | MS.gene60613:CDS | 45.0% |
| !! | AGGACCATCAAGGAGGTATT+GGG | + | chr1.2:69598311-69598330 | MS.gene60613:CDS | 45.0% |
| !! | CTATGAGGTGCTTTTCATGG+TGG | + | chr1.2:69598136-69598155 | MS.gene60613:CDS | 45.0% |
| !! | TAAGTTGGTAGCACCACTCA+TGG | + | chr1.2:69596721-69596740 | MS.gene60613:intron | 45.0% |
| !! | TCATGGAGGCATTACAAGCT+GGG | + | chr1.2:69596390-69596409 | MS.gene60613:CDS | 45.0% |
| !! | TGTGAGGAGGGTGTTCATTA+TGG | + | chr1.2:69597683-69597702 | MS.gene60613:CDS | 45.0% |
| !! | TTCATGGAGGCATTACAAGC+TGG | + | chr1.2:69596389-69596408 | MS.gene60613:CDS | 45.0% |
| !!! | AAAGAAAATAAATAATTTTA+TGG | + | chr1.2:69596806-69596825 | MS.gene60613:intron | 5.0% |
| AATCTGGTTGCGTAAGCCAG+AGG | + | chr1.2:69597476-69597495 | MS.gene60613:CDS | 50.0% | |
| AGATGAAGACATGCCTCCAC+TGG | + | chr1.2:69598709-69598728 | MS.gene60613:CDS | 50.0% | |
| CCCTGACAATGGCATTATGG+AGG | + | chr1.2:69598505-69598524 | MS.gene60613:CDS | 50.0% | |
| GATCTCAGCCTGGAATGCAA+AGG | - | chr1.2:69595845-69595864 | None:intergenic | 50.0% | |
| GATGGAGTGCAAACATGGAG+AGG | + | chr1.2:69598408-69598427 | MS.gene60613:CDS | 50.0% | |
| GGAGGGTCAACTAGAGTTCA+AGG | + | chr1.2:69597584-69597603 | MS.gene60613:CDS | 50.0% | |
| GGATCTATGCAGGACCATCA+AGG | + | chr1.2:69598301-69598320 | MS.gene60613:CDS | 50.0% | |
| GGGGCTGATGTTAGCATGAT+TGG | + | chr1.2:69596410-69596429 | MS.gene60613:CDS | 50.0% | |
| GTCTCCCAATACCTCCTTGA+TGG | - | chr1.2:69598318-69598337 | None:intergenic | 50.0% | |
| TCTATGCAGGACCATCAAGG+AGG | + | chr1.2:69598304-69598323 | MS.gene60613:CDS | 50.0% | |
| TGAAGAGAGCAAGATGGAGG+AGG | + | chr1.2:69598745-69598764 | MS.gene60613:CDS | 50.0% | |
| TGGTGAGAGTAAGAAGGCTG+TGG | + | chr1.2:69598076-69598095 | MS.gene60613:CDS | 50.0% | |
| TTGGGTACTATTGCGAGGTC+TGG | + | chr1.2:69596356-69596375 | MS.gene60613:CDS | 50.0% | |
| ! | CAGGACCATCAAGGAGGTAT+TGG | + | chr1.2:69598310-69598329 | MS.gene60613:CDS | 50.0% |
| ! | GAAGTTGGTTGATCTCAGCC+TGG | - | chr1.2:69595855-69595874 | None:intergenic | 50.0% |
| ! | TCTGGCTTACGCAACCAGAT+TGG | - | chr1.2:69597477-69597496 | None:intergenic | 50.0% |
| !! | CATGGAGGCATTACAAGCTG+GGG | + | chr1.2:69596391-69596410 | MS.gene60613:CDS | 50.0% |
| !! | GGGCTATGAGGTGCTTTTCA+TGG | + | chr1.2:69598133-69598152 | MS.gene60613:CDS | 50.0% |
| AGCTGGCTGCACACAATGGA+AGG | - | chr1.2:69596928-69596947 | None:intergenic | 55.0% | |
| ATGCCTCCACTGGAGGAAGT+AGG | + | chr1.2:69598719-69598738 | MS.gene60613:CDS | 55.0% | |
| CGCTGAAGAGAGCAAGATGG+AGG | + | chr1.2:69598742-69598761 | MS.gene60613:CDS | 55.0% | |
| GAGCTCATCCCTGAGTACCT+TGG | + | chr1.2:69597717-69597736 | MS.gene60613:CDS | 55.0% | |
| GTGTAGCTGGCTGCACACAA+TGG | - | chr1.2:69596932-69596951 | None:intergenic | 55.0% | |
| TGAAGACATGCCTCCACTGG+AGG | + | chr1.2:69598712-69598731 | MS.gene60613:CDS | 55.0% | |
| !! | AGGCGCTGAAGAGAGCAAGA+TGG | + | chr1.2:69598739-69598758 | MS.gene60613:CDS | 55.0% |
| !! | GGCATTGGCATGACCAAAGC+AGG | + | chr1.2:69596165-69596184 | MS.gene60613:CDS | 55.0% |
| TCAGCGCCTACTTCCTCCAG+TGG | - | chr1.2:69598728-69598747 | None:intergenic | 60.0% | |
| !! | GCTGGGGCTCAGCATTGATG+AGG | + | chr1.2:69598673-69598692 | MS.gene60613:CDS | 60.0% |
| GCGCCTACTTCCTCCAGTGG+AGG | - | chr1.2:69598725-69598744 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 69595826 | 69598775 | 69595826 | ID=MS.gene60613 |
| chr1.2 | mRNA | 69595826 | 69598775 | 69595826 | ID=MS.gene60613.t1;Parent=MS.gene60613 |
| chr1.2 | exon | 69595826 | 69595948 | 69595826 | ID=MS.gene60613.t1.exon1;Parent=MS.gene60613.t1 |
| chr1.2 | CDS | 69595826 | 69595948 | 69595826 | ID=cds.MS.gene60613.t1;Parent=MS.gene60613.t1 |
| chr1.2 | exon | 69596045 | 69596186 | 69596045 | ID=MS.gene60613.t1.exon2;Parent=MS.gene60613.t1 |
| chr1.2 | CDS | 69596045 | 69596186 | 69596045 | ID=cds.MS.gene60613.t1;Parent=MS.gene60613.t1 |
| chr1.2 | exon | 69596342 | 69596622 | 69596342 | ID=MS.gene60613.t1.exon3;Parent=MS.gene60613.t1 |
| chr1.2 | CDS | 69596342 | 69596622 | 69596342 | ID=cds.MS.gene60613.t1;Parent=MS.gene60613.t1 |
| chr1.2 | exon | 69597225 | 69598775 | 69597225 | ID=MS.gene60613.t1.exon4;Parent=MS.gene60613.t1 |
| chr1.2 | CDS | 69597225 | 69598775 | 69597225 | ID=cds.MS.gene60613.t1;Parent=MS.gene60613.t1 |
| Gene Sequence |
| Protein sequence |
