Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061385.t1 | XP_003621746.2 | 96.3 | 383 | 13 | 1 | 1 | 382 | 1 | 383 | 9.60E-189 | 669.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061385.t1 | Q5XV40 | 34.4 | 395 | 209 | 15 | 1 | 382 | 1 | 358 | 1.5e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061385.t1 | G7KUR7 | 96.3 | 383 | 13 | 1 | 1 | 382 | 1 | 383 | 7.0e-189 | 669.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050585 | MS.gene061385 | 0.821022 | 5.03E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene061385 | 0.825844 | 3.76E-54 | -1.69E-46 |
| MS.gene052698 | MS.gene061385 | 0.80175 | 7.77E-49 | -1.69E-46 |
| MS.gene053563 | MS.gene061385 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene061385 | 0.809461 | 1.87E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene061385 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene061385 | 0.847812 | 9.12E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061385.t1 | MTR_7g022360 | 96.345 | 383 | 13 | 1 | 1 | 382 | 1 | 383 | 0.0 | 761 |
| MS.gene061385.t1 | MTR_3g085710 | 44.366 | 426 | 138 | 19 | 1 | 382 | 1 | 371 | 1.21e-78 | 247 |
| MS.gene061385.t1 | MTR_7g028590 | 34.414 | 401 | 185 | 20 | 1 | 382 | 1 | 342 | 1.37e-44 | 157 |
| MS.gene061385.t1 | MTR_7g028590 | 34.462 | 325 | 153 | 16 | 1 | 318 | 1 | 272 | 3.45e-35 | 130 |
| MS.gene061385.t1 | MTR_7g028590 | 35.632 | 261 | 112 | 13 | 136 | 377 | 5 | 228 | 1.01e-24 | 101 |
| MS.gene061385.t1 | MTR_7g028350 | 27.708 | 397 | 180 | 16 | 24 | 382 | 1 | 328 | 4.98e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061385.t1 | AT5G14090 | 34.937 | 395 | 207 | 15 | 1 | 382 | 1 | 358 | 5.01e-45 | 159 |
| MS.gene061385.t1 | AT5G14090 | 39.130 | 253 | 125 | 9 | 1 | 252 | 1 | 225 | 1.77e-38 | 140 |
Find 51 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCCAACTGTTGAACTTTC+TGG | 0.088870 | 7.1:+76531648 | None:intergenic |
| AATTCTTGCAATTGTCTATC+AGG | 0.255482 | 7.1:-76532986 | MS.gene061385:CDS |
| TTGGCTGATGAGATTTCTTT+TGG | 0.260026 | 7.1:-76532326 | MS.gene061385:CDS |
| TTCCCTGGTTTCCTTGCAAT+TGG | 0.281068 | 7.1:-76532776 | MS.gene061385:CDS |
| GAAGAACATGAAGAAGAATA+TGG | 0.306054 | 7.1:-76532836 | MS.gene061385:CDS |
| TTGAATCTGATTCCAAGATT+TGG | 0.307455 | 7.1:+76532923 | None:intergenic |
| TAAGAAGATGAATCTTCTTC+TGG | 0.308740 | 7.1:+76531543 | None:intergenic |
| TACAGAACCATTCAAAGATT+TGG | 0.321359 | 7.1:-76534006 | MS.gene061385:CDS |
| CCTTTACAAGGTTATTTGTT+TGG | 0.326980 | 7.1:-76532440 | MS.gene061385:CDS |
| GATGAGTTAGAGAAAGTTCT+TGG | 0.327038 | 7.1:-76532626 | MS.gene061385:CDS |
| TTTGTGTCTGTTCCTTCAAT+TGG | 0.329555 | 7.1:+76532473 | None:intergenic |
| GTCGATGGATTCGATGAAAT+TGG | 0.342162 | 7.1:+76532734 | None:intergenic |
| CCATTCAAAGATTTGGTCAT+TGG | 0.344166 | 7.1:-76533999 | MS.gene061385:intron |
| AACTTCAGAAAATCATTTGC+TGG | 0.355575 | 7.1:-76532875 | MS.gene061385:CDS |
| GAAGTATTCTGCTTTGAATA+TGG | 0.365437 | 7.1:-76532255 | MS.gene061385:CDS |
| TCAACAGTTGGGCACAAATC+TGG | 0.368639 | 7.1:-76531639 | MS.gene061385:CDS |
| AATTCTTTGTTGCAGTTACT+TGG | 0.374830 | 7.1:-76534062 | MS.gene061385:intron |
| TTCCTTGCAATTGGAACACT+TGG | 0.416969 | 7.1:-76532767 | MS.gene061385:CDS |
| TCTAGATTCTCCATATGTTC+CGG | 0.422180 | 7.1:-76531683 | MS.gene061385:intron |
| CCAATGACCAAATCTTTGAA+TGG | 0.422656 | 7.1:+76533999 | None:intergenic |
| CTTTGTTGCAGTTACTTGGC+TGG | 0.428583 | 7.1:-76534058 | MS.gene061385:intron |
| ATGCACAACGTAGCCTTTGT+TGG | 0.437594 | 7.1:+76531566 | None:intergenic |
| GCTATGTTTGATCTCTTCCC+TGG | 0.438163 | 7.1:-76532791 | MS.gene061385:CDS |
| TGCACAACGTAGCCTTTGTT+GGG | 0.450415 | 7.1:+76531567 | None:intergenic |
| TGAACTGAGATTTGAAAAGA+TGG | 0.456924 | 7.1:+76532710 | None:intergenic |
| CATCTTCTTACAGAGAGCAT+TGG | 0.475849 | 7.1:-76531530 | MS.gene061385:CDS |
| GTTCCAATTGCAAGGAAACC+AGG | 0.476054 | 7.1:+76532773 | None:intergenic |
| ATCCAGAAAGTTCAACAGTT+GGG | 0.483987 | 7.1:-76531650 | MS.gene061385:CDS |
| GTCAGCATAGTAACAATAAG+TGG | 0.484365 | 7.1:-76532500 | MS.gene061385:CDS |
| TACTTCTTCCAGTGCTGACA+TGG | 0.492523 | 7.1:+76532552 | None:intergenic |
| TACTTCTTCCAGTGCTGACA+TGG | 0.496234 | 7.1:+76532528 | None:intergenic |
| AATGCTGTTTGTCCTTTACA+AGG | 0.501835 | 7.1:-76532452 | MS.gene061385:CDS |
| ATTTGATAAGAGAAATGAAA+GGG | 0.502426 | 7.1:-76532285 | MS.gene061385:CDS |
| AGAAGTAGCCATGTCAGCAC+TGG | 0.514813 | 7.1:-76532536 | MS.gene061385:CDS |
| AGTTACTTGGCTGGATGCAT+AGG | 0.536259 | 7.1:-76534049 | MS.gene061385:CDS |
| ATAAGTGGAAAACCAATTGA+AGG | 0.538137 | 7.1:-76532485 | MS.gene061385:CDS |
| CCAAACAAATAACCTTGTAA+AGG | 0.544230 | 7.1:+76532440 | None:intergenic |
| CATCCAGAAAGTTCAACAGT+TGG | 0.544754 | 7.1:-76531651 | MS.gene061385:CDS |
| ATTCTTGCAATTGTCTATCA+GGG | 0.548762 | 7.1:-76532985 | MS.gene061385:CDS |
| AGAAACAGCCATGTCAGCAC+TGG | 0.552963 | 7.1:-76532560 | MS.gene061385:CDS |
| ATCCAAGTGTTCCAATTGCA+AGG | 0.561455 | 7.1:+76532765 | None:intergenic |
| ATTTGAAAAGATGGTGTCGA+TGG | 0.578297 | 7.1:+76532719 | None:intergenic |
| ATGGATTCGATGAAATTGGT+TGG | 0.584184 | 7.1:+76532738 | None:intergenic |
| GAAACAGCAGTTACTAGTGT+TGG | 0.588615 | 7.1:-76532398 | MS.gene061385:CDS |
| TTATTGTTACTATGCTGACA+TGG | 0.607345 | 7.1:+76532504 | None:intergenic |
| AAAGAACATAGGACTTCACT+TGG | 0.618977 | 7.1:-76532371 | MS.gene061385:CDS |
| TTCCAATTGCAAGGAAACCA+GGG | 0.625556 | 7.1:+76532774 | None:intergenic |
| AATTTGATAAGAGAAATGAA+AGG | 0.630350 | 7.1:-76532286 | MS.gene061385:CDS |
| AATGATGGAGGTCCCAACAA+AGG | 0.636070 | 7.1:-76531579 | MS.gene061385:CDS |
| AGCTGAGACTAAACTCAACA+AGG | 0.662833 | 7.1:-76532147 | MS.gene061385:intron |
| GTGTTGGTAAGAAAGAACAT+AGG | 0.680570 | 7.1:-76532382 | MS.gene061385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACTATTTTATTTTGA+TGG | + | chr7.1:76531913-76531932 | None:intergenic | 10.0% |
| !! | AAAAAAGTTAATCATATTTG+AGG | + | chr7.1:76532455-76532474 | None:intergenic | 15.0% |
| !! | AAATTATCTTCTAATTAAGT+TGG | - | chr7.1:76531477-76531496 | MS.gene061385:intron | 15.0% |
| !! | ATTAAACTTAAAAGTTATAG+CGG | + | chr7.1:76532335-76532354 | None:intergenic | 15.0% |
| !! | GAACTTATGAAAAAAATTTA+CGG | + | chr7.1:76531820-76531839 | None:intergenic | 15.0% |
| !! | TATACTACAAAATATATATG+AGG | + | chr7.1:76534124-76534143 | None:intergenic | 15.0% |
| !!! | AGAAGATAATTTTATATGAT+TGG | + | chr7.1:76531469-76531488 | None:intergenic | 15.0% |
| !!! | ATGATTATAAATTTTGGATT+TGG | - | chr7.1:76533866-76533885 | MS.gene061385:intron | 15.0% |
| !!! | TAATTTTTGTTGTTTAGATA+TGG | - | chr7.1:76533761-76533780 | MS.gene061385:intron | 15.0% |
| !!! | TGTACATTATAATTATTTTC+AGG | + | chr7.1:76534156-76534175 | None:intergenic | 15.0% |
| !! | AAAAATTCTTCATCTACAAA+TGG | - | chr7.1:76533383-76533402 | MS.gene061385:intron | 20.0% |
| !! | AAGAAGAAAAATATGAATGA+TGG | - | chr7.1:76533980-76533999 | MS.gene061385:intron | 20.0% |
| !! | AATAATGAATTTACCAATCA+TGG | - | chr7.1:76531949-76531968 | MS.gene061385:intron | 20.0% |
| !! | AATTTGATAAGAGAAATGAA+AGG | - | chr7.1:76533288-76533307 | MS.gene061385:intron | 20.0% |
| !! | AATTTGTATCACAATATGTT+CGG | - | chr7.1:76533655-76533674 | MS.gene061385:intron | 20.0% |
| !! | ATTTGATAAGAGAAATGAAA+GGG | - | chr7.1:76533289-76533308 | MS.gene061385:intron | 20.0% |
| !! | TTAAAATTTGCCATGTTTAA+AGG | - | chr7.1:76532428-76532447 | MS.gene061385:CDS | 20.0% |
| !! | TTAAATAGTCAATGCATATT+AGG | + | chr7.1:76531650-76531669 | None:intergenic | 20.0% |
| !!! | CTGTTCATGATTATAAATTT+TGG | - | chr7.1:76533860-76533879 | MS.gene061385:intron | 20.0% |
| !!! | TTTTGTTTTCGTAAGTTATT+TGG | - | chr7.1:76531754-76531773 | MS.gene061385:intron | 20.0% |
| ! | AAGAAAAATATGAATGATGG+AGG | - | chr7.1:76533983-76534002 | MS.gene061385:intron | 25.0% |
| ! | ATTACTCTTGTCTAATTAAG+AGG | - | chr7.1:76532222-76532241 | MS.gene061385:CDS | 25.0% |
| ! | ATTTGTATCACAATATGTTC+GGG | - | chr7.1:76533656-76533675 | MS.gene061385:intron | 25.0% |
| ! | CTTATAGTCAAGATATGAAT+AGG | + | chr7.1:76532373-76532392 | None:intergenic | 25.0% |
| ! | TAGCACATAACTTTATTCAA+TGG | + | chr7.1:76532084-76532103 | None:intergenic | 25.0% |
| ! | TATCATCAAAAACCAAATCT+TGG | - | chr7.1:76532639-76532658 | MS.gene061385:CDS | 25.0% |
| ! | TTATCTACCAAGACAAAAAT+AGG | + | chr7.1:76533829-76533848 | None:intergenic | 25.0% |
| !! | AATCTTTTGTACCAATCAAT+AGG | - | chr7.1:76532157-76532176 | MS.gene061385:CDS | 25.0% |
| !! | TTTATTCAATGGTTGTTGTT+AGG | + | chr7.1:76532073-76532092 | None:intergenic | 25.0% |
| !! | TTTTTGTCTTGGTAGATAAA+TGG | - | chr7.1:76533830-76533849 | MS.gene061385:intron | 25.0% |
| !!! | ACTTTTTCAGAGAAGTAAAT+TGG | - | chr7.1:76533229-76533248 | MS.gene061385:intron | 25.0% |
| !!! | AGTTTGTTACTCATTAGTTA+AGG | - | chr7.1:76533630-76533649 | MS.gene061385:intron | 25.0% |
| !!! | ATAAAAGCCTATTTTTGTCT+TGG | - | chr7.1:76533819-76533838 | MS.gene061385:intron | 25.0% |
| !!! | ATGTTTAGACTCACTTTTAA+GGG | - | chr7.1:76532396-76532415 | MS.gene061385:CDS | 25.0% |
| !!! | TATTATAGTTTAGTTCTCCT+TGG | + | chr7.1:76532002-76532021 | None:intergenic | 25.0% |
| !!! | TCGTTGTTTAAAGCAATTTT+TGG | - | chr7.1:76532474-76532493 | MS.gene061385:CDS | 25.0% |
| AACTTCAGAAAATCATTTGC+TGG | - | chr7.1:76532699-76532718 | MS.gene061385:CDS | 30.0% | |
| AATTCTTGCAATTGTCTATC+AGG | - | chr7.1:76532588-76532607 | MS.gene061385:CDS | 30.0% | |
| AATTCTTTGTTGCAGTTACT+TGG | - | chr7.1:76531512-76531531 | MS.gene061385:CDS | 30.0% | |
| AGAAACTTTGATGAACTAGA+AGG | + | chr7.1:76533580-76533599 | None:intergenic | 30.0% | |
| ATAAGTGGAAAACCAATTGA+AGG | - | chr7.1:76533089-76533108 | MS.gene061385:intron | 30.0% | |
| ATTCTTGCAATTGTCTATCA+GGG | - | chr7.1:76532589-76532608 | MS.gene061385:CDS | 30.0% | |
| CAATATGTTCGGGAAATATT+TGG | - | chr7.1:76533666-76533685 | MS.gene061385:intron | 30.0% | |
| CCAAACAAATAACCTTGTAA+AGG | + | chr7.1:76533137-76533156 | None:intergenic | 30.0% | |
| CCTTTACAAGGTTATTTGTT+TGG | - | chr7.1:76533134-76533153 | MS.gene061385:intron | 30.0% | |
| GAAGAACATGAAGAAGAATA+TGG | - | chr7.1:76532738-76532757 | MS.gene061385:CDS | 30.0% | |
| GTTAGGTAAATTGTCTTCTT+GGG | + | chr7.1:76532056-76532075 | None:intergenic | 30.0% | |
| TAAGAAGATGAATCTTCTTC+TGG | + | chr7.1:76534034-76534053 | None:intergenic | 30.0% | |
| TACAGAACCATTCAAAGATT+TGG | - | chr7.1:76531568-76531587 | MS.gene061385:CDS | 30.0% | |
| TATCAAACATGCATTTGTTC+TGG | + | chr7.1:76533493-76533512 | None:intergenic | 30.0% | |
| TATTTGAGGACCTTTAAACA+TGG | + | chr7.1:76532441-76532460 | None:intergenic | 30.0% | |
| TGAACTGAGATTTGAAAAGA+TGG | + | chr7.1:76532867-76532886 | None:intergenic | 30.0% | |
| TGTTAGGTAAATTGTCTTCT+TGG | + | chr7.1:76532057-76532076 | None:intergenic | 30.0% | |
| TTATTGTTACTATGCTGACA+TGG | + | chr7.1:76533073-76533092 | None:intergenic | 30.0% | |
| TTGAATCTGATTCCAAGATT+TGG | + | chr7.1:76532654-76532673 | None:intergenic | 30.0% | |
| TTTCGTTAAAAGCGAGTTTA+AGG | + | chr7.1:76532545-76532564 | None:intergenic | 30.0% | |
| ! | AATCAATTTTTCTATGTCGC+AGG | - | chr7.1:76532564-76532583 | MS.gene061385:CDS | 30.0% |
| ! | CTTTGTTTGAATTGCGTTAT+TGG | + | chr7.1:76531881-76531900 | None:intergenic | 30.0% |
| ! | GAAGTATTCTGCTTTGAATA+TGG | - | chr7.1:76533319-76533338 | MS.gene061385:intron | 30.0% |
| ! | TTCGTCTTCGTTTTCATTTT+CGG | + | chr7.1:76532898-76532917 | None:intergenic | 30.0% |
| ! | TTCGTTTTCATTTTCGGTTA+TGG | + | chr7.1:76532892-76532911 | None:intergenic | 30.0% |
| ! | TTTTGTTCTTCATCAAGTGA+TGG | + | chr7.1:76532618-76532637 | None:intergenic | 30.0% |
| !! | CATGTTTAGACTCACTTTTA+AGG | - | chr7.1:76532395-76532414 | MS.gene061385:CDS | 30.0% |
| !!! | GATTGGTTTTGATTCTGAAA+AGG | + | chr7.1:76531452-76531471 | None:intergenic | 30.0% |
| !!! | GATTTTCTGAAGTTGTTTTG+AGG | + | chr7.1:76532693-76532712 | None:intergenic | 30.0% |
| !!! | TTTCTGGATGAACTTTTTTC+CGG | + | chr7.1:76533913-76533932 | None:intergenic | 30.0% |
| !!! | TTTTATTTTGATGGCCATCA+AGG | + | chr7.1:76531904-76531923 | None:intergenic | 30.0% |
| AAAGAACATAGGACTTCACT+TGG | - | chr7.1:76533203-76533222 | MS.gene061385:intron | 35.0% | |
| ACCAATCATGGATGAGTAAT+TGG | - | chr7.1:76531961-76531980 | MS.gene061385:intron | 35.0% | |
| ATCCAGAAAGTTCAACAGTT+GGG | - | chr7.1:76533924-76533943 | MS.gene061385:intron | 35.0% | |
| ATGGATTCGATGAAATTGGT+TGG | + | chr7.1:76532839-76532858 | None:intergenic | 35.0% | |
| CAATTCAAACAAAGCCTTGA+TGG | - | chr7.1:76531887-76531906 | MS.gene061385:intron | 35.0% | |
| CCAATGACCAAATCTTTGAA+TGG | + | chr7.1:76531578-76531597 | None:intergenic | 35.0% | |
| GATGAGTTAGAGAAAGTTCT+TGG | - | chr7.1:76532948-76532967 | MS.gene061385:CDS | 35.0% | |
| GTCAGCATAGTAACAATAAG+TGG | - | chr7.1:76533074-76533093 | MS.gene061385:intron | 35.0% | |
| TATGAGGTAGACATAGCATA+TGG | + | chr7.1:76534108-76534127 | None:intergenic | 35.0% | |
| TCCAATTACTCATCCATGAT+TGG | + | chr7.1:76531965-76531984 | None:intergenic | 35.0% | |
| TCTAGATTCTCCATATGTTC+CGG | - | chr7.1:76533891-76533910 | MS.gene061385:intron | 35.0% | |
| TTTGTGTCTGTTCCTTCAAT+TGG | + | chr7.1:76533104-76533123 | None:intergenic | 35.0% | |
| ! | AATGCTGTTTGTCCTTTACA+AGG | - | chr7.1:76533122-76533141 | MS.gene061385:intron | 35.0% |
| ! | ATTTGAAAAGATGGTGTCGA+TGG | + | chr7.1:76532858-76532877 | None:intergenic | 35.0% |
| ! | CCATTCAAAGATTTGGTCAT+TGG | - | chr7.1:76531575-76531594 | MS.gene061385:CDS | 35.0% |
| ! | CTTTTCAGCATGGTTTCAAA+CGG | - | chr7.1:76532309-76532328 | MS.gene061385:CDS | 35.0% |
| ! | GTGTTGGTAAGAAAGAACAT+AGG | - | chr7.1:76533192-76533211 | MS.gene061385:intron | 35.0% |
| ! | TCCAAAGCAACAATTTTGAG+CGG | - | chr7.1:76532263-76532282 | MS.gene061385:CDS | 35.0% |
| ! | TTGGCTGATGAGATTTCTTT+TGG | - | chr7.1:76533248-76533267 | MS.gene061385:intron | 35.0% |
| !! | TAGACTCACTTTTAAGGGAA+CGG | - | chr7.1:76532401-76532420 | MS.gene061385:CDS | 35.0% |
| !! | TTGACGAAAGTATTGTGACA+AGG | - | chr7.1:76533524-76533543 | MS.gene061385:intron | 35.0% |
| !!! | GAACTTTTTTCCGGAACATA+TGG | + | chr7.1:76533904-76533923 | None:intergenic | 35.0% |
| AGCTGAGACTAAACTCAACA+AGG | - | chr7.1:76533427-76533446 | MS.gene061385:intron | 40.0% | |
| ATCCAAGTGTTCCAATTGCA+AGG | + | chr7.1:76532812-76532831 | None:intergenic | 40.0% | |
| ATGTTGCGTCTCCTATTGAT+TGG | + | chr7.1:76532171-76532190 | None:intergenic | 40.0% | |
| CATCCAGAAAGTTCAACAGT+TGG | - | chr7.1:76533923-76533942 | MS.gene061385:intron | 40.0% | |
| GAAACAGCAGTTACTAGTGT+TGG | - | chr7.1:76533176-76533195 | MS.gene061385:intron | 40.0% | |
| GGGACGATAATCATTCTTAG+CGG | - | chr7.1:76532284-76532303 | MS.gene061385:CDS | 40.0% | |
| GTAGCTTGAAAACAGCATGT+TGG | + | chr7.1:76531605-76531624 | None:intergenic | 40.0% | |
| TTCCAATTGCAAGGAAACCA+GGG | + | chr7.1:76532803-76532822 | None:intergenic | 40.0% | |
| TTCCTTGCAATTGGAACACT+TGG | - | chr7.1:76532807-76532826 | MS.gene061385:CDS | 40.0% | |
| ! | CATCTTCTTACAGAGAGCAT+TGG | - | chr7.1:76534044-76534063 | MS.gene061385:CDS | 40.0% |
| ! | CCAAAGCAACAATTTTGAGC+GGG | - | chr7.1:76532264-76532283 | MS.gene061385:CDS | 40.0% |
| ! | CGTTTGAAACCATGCTGAAA+AGG | + | chr7.1:76532311-76532330 | None:intergenic | 40.0% |
| ! | GCTTTGGACAACATTTGAAG+AGG | + | chr7.1:76532251-76532270 | None:intergenic | 40.0% |
| ! | GTCGATGGATTCGATGAAAT+TGG | + | chr7.1:76532843-76532862 | None:intergenic | 40.0% |
| AGTTACTTGGCTGGATGCAT+AGG | - | chr7.1:76531525-76531544 | MS.gene061385:CDS | 45.0% | |
| ATGCACAACGTAGCCTTTGT+TGG | + | chr7.1:76534011-76534030 | None:intergenic | 45.0% | |
| CTTTGTTGCAGTTACTTGGC+TGG | - | chr7.1:76531516-76531535 | MS.gene061385:CDS | 45.0% | |
| GCTATGTTTGATCTCTTCCC+TGG | - | chr7.1:76532783-76532802 | MS.gene061385:CDS | 45.0% | |
| GTTCCAATTGCAAGGAAACC+AGG | + | chr7.1:76532804-76532823 | None:intergenic | 45.0% | |
| GTTCGGGAAATATTTGGACG+AGG | - | chr7.1:76533672-76533691 | MS.gene061385:intron | 45.0% | |
| TCAACAGTTGGGCACAAATC+TGG | - | chr7.1:76533935-76533954 | MS.gene061385:intron | 45.0% | |
| TGCACAACGTAGCCTTTGTT+GGG | + | chr7.1:76534010-76534029 | None:intergenic | 45.0% | |
| TGCCCAACTGTTGAACTTTC+TGG | + | chr7.1:76533929-76533948 | None:intergenic | 45.0% | |
| TTCCCTGGTTTCCTTGCAAT+TGG | - | chr7.1:76532798-76532817 | MS.gene061385:CDS | 45.0% | |
| ! | AATGATGGAGGTCCCAACAA+AGG | - | chr7.1:76533995-76534014 | MS.gene061385:intron | 45.0% |
| ! | CCCGCTCAAAATTGTTGCTT+TGG | + | chr7.1:76532267-76532286 | None:intergenic | 45.0% |
| ! | GGAACAAAAGTATGCAGCCA+AGG | - | chr7.1:76531982-76532001 | MS.gene061385:intron | 45.0% |
| !! | TACTTCTTCCAGTGCTGACA+TGG | + | chr7.1:76533025-76533044 | None:intergenic | 45.0% |
| AGAAACAGCCATGTCAGCAC+TGG | - | chr7.1:76533014-76533033 | MS.gene061385:intron | 50.0% | |
| AGAAGTAGCCATGTCAGCAC+TGG | - | chr7.1:76533038-76533057 | MS.gene061385:intron | 50.0% | |
| !! | CTTAGCGGACCTTTTCAGCA+TGG | - | chr7.1:76532299-76532318 | MS.gene061385:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 76531416 | 76534180 | 76531416 | ID=MS.gene061385 |
| chr7.1 | mRNA | 76531416 | 76534180 | 76531416 | ID=MS.gene061385.t1;Parent=MS.gene061385 |
| chr7.1 | exon | 76534175 | 76534180 | 76534175 | ID=MS.gene061385.t1.exon1;Parent=MS.gene061385.t1 |
| chr7.1 | CDS | 76534175 | 76534180 | 76534175 | ID=cds.MS.gene061385.t1;Parent=MS.gene061385.t1 |
| chr7.1 | exon | 76534000 | 76534069 | 76534000 | ID=MS.gene061385.t1.exon2;Parent=MS.gene061385.t1 |
| chr7.1 | CDS | 76534000 | 76534069 | 76534000 | ID=cds.MS.gene061385.t1;Parent=MS.gene061385.t1 |
| chr7.1 | exon | 76532148 | 76533010 | 76532148 | ID=MS.gene061385.t1.exon3;Parent=MS.gene061385.t1 |
| chr7.1 | CDS | 76532148 | 76533010 | 76532148 | ID=cds.MS.gene061385.t1;Parent=MS.gene061385.t1 |
| chr7.1 | exon | 76531511 | 76531700 | 76531511 | ID=MS.gene061385.t1.exon4;Parent=MS.gene061385.t1 |
| chr7.1 | CDS | 76531511 | 76531700 | 76531511 | ID=cds.MS.gene061385.t1;Parent=MS.gene061385.t1 |
| chr7.1 | exon | 76531416 | 76531456 | 76531416 | ID=MS.gene061385.t1.exon5;Parent=MS.gene061385.t1 |
| chr7.1 | CDS | 76531416 | 76531456 | 76531416 | ID=cds.MS.gene061385.t1;Parent=MS.gene061385.t1 |
| Gene Sequence |
| Protein sequence |
