Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061784.t1 | XP_013446800.1 | 94.6 | 1086 | 59 | 0 | 1 | 1086 | 1 | 1086 | 0.00E+00 | 1960.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061784.t1 | Q8GSA7 | 44.4 | 1115 | 484 | 27 | 5 | 1082 | 7 | 1022 | 2.6e-224 | 780.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061784.t1 | A0A072TTR9 | 94.6 | 1086 | 59 | 0 | 1 | 1086 | 1 | 1086 | 0.0e+00 | 1960.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene061784.t1 | TF | CAMTA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene002202 | MS.gene061784 | PPI |
| MS.gene90181 | MS.gene061784 | PPI |
| MS.gene35018 | MS.gene061784 | PPI |
| MS.gene061784 | MS.gene70367 | PPI |
| MS.gene01170 | MS.gene061784 | PPI |
| MS.gene047423 | MS.gene061784 | PPI |
| MS.gene061784 | MS.gene028443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061784.t1 | MTR_8g090205 | 94.936 | 1086 | 55 | 0 | 1 | 1086 | 1 | 1086 | 0.0 | 2159 |
| MS.gene061784.t1 | MTR_8g090205 | 94.977 | 1075 | 54 | 0 | 12 | 1086 | 10 | 1084 | 0.0 | 2136 |
| MS.gene061784.t1 | MTR_8g090205 | 94.957 | 1051 | 53 | 0 | 1 | 1051 | 1 | 1051 | 0.0 | 2090 |
| MS.gene061784.t1 | MTR_8g090205 | 95.000 | 1040 | 52 | 0 | 12 | 1051 | 10 | 1049 | 0.0 | 2067 |
| MS.gene061784.t1 | MTR_8g090205 | 94.492 | 944 | 52 | 0 | 1 | 944 | 1 | 944 | 0.0 | 1872 |
| MS.gene061784.t1 | MTR_8g090205 | 94.606 | 927 | 50 | 0 | 160 | 1086 | 1 | 927 | 0.0 | 1827 |
| MS.gene061784.t1 | MTR_8g090205 | 94.619 | 892 | 48 | 0 | 160 | 1051 | 1 | 892 | 0.0 | 1756 |
| MS.gene061784.t1 | MTR_2g008840 | 45.586 | 1110 | 499 | 27 | 4 | 1085 | 6 | 1038 | 0.0 | 851 |
| MS.gene061784.t1 | MTR_2g008840 | 45.531 | 1074 | 480 | 27 | 40 | 1085 | 2 | 998 | 0.0 | 810 |
| MS.gene061784.t1 | MTR_2g008840 | 43.627 | 965 | 445 | 23 | 4 | 942 | 6 | 897 | 0.0 | 686 |
| MS.gene061784.t1 | MTR_4g094215 | 51.032 | 678 | 273 | 12 | 436 | 1085 | 382 | 1028 | 0.0 | 637 |
| MS.gene061784.t1 | MTR_4g094215 | 38.676 | 287 | 142 | 6 | 7 | 279 | 9 | 275 | 1.52e-49 | 191 |
| MS.gene061784.t1 | MTR_4g094215 | 50.665 | 677 | 276 | 11 | 436 | 1085 | 382 | 1027 | 0.0 | 636 |
| MS.gene061784.t1 | MTR_4g094215 | 38.676 | 287 | 142 | 6 | 7 | 279 | 9 | 275 | 1.37e-49 | 191 |
| MS.gene061784.t1 | MTR_4g094215 | 49.159 | 535 | 214 | 11 | 436 | 943 | 382 | 885 | 1.33e-151 | 476 |
| MS.gene061784.t1 | MTR_4g094215 | 38.676 | 287 | 142 | 6 | 7 | 279 | 9 | 275 | 1.11e-49 | 191 |
| MS.gene061784.t1 | MTR_8g080800 | 43.011 | 558 | 278 | 13 | 498 | 1040 | 395 | 927 | 2.44e-121 | 396 |
| MS.gene061784.t1 | MTR_8g080800 | 46.392 | 194 | 85 | 4 | 12 | 199 | 8 | 188 | 6.06e-46 | 180 |
| MS.gene061784.t1 | MTR_3g085050 | 39.855 | 552 | 294 | 9 | 503 | 1042 | 386 | 911 | 6.44e-104 | 348 |
| MS.gene061784.t1 | MTR_3g085050 | 57.377 | 122 | 52 | 0 | 12 | 133 | 8 | 129 | 3.24e-42 | 167 |
| MS.gene061784.t1 | MTR_3g085050 | 39.855 | 552 | 294 | 9 | 503 | 1042 | 386 | 911 | 1.61e-103 | 348 |
| MS.gene061784.t1 | MTR_3g085050 | 57.377 | 122 | 52 | 0 | 12 | 133 | 8 | 129 | 4.14e-42 | 167 |
| MS.gene061784.t1 | MTR_4g121840 | 33.078 | 653 | 383 | 18 | 434 | 1073 | 280 | 891 | 3.11e-86 | 298 |
| MS.gene061784.t1 | MTR_4g121840 | 55.963 | 109 | 45 | 1 | 46 | 151 | 30 | 138 | 2.65e-25 | 114 |
| MS.gene061784.t1 | MTR_4g121840 | 33.078 | 653 | 383 | 18 | 434 | 1073 | 310 | 921 | 3.57e-86 | 299 |
| MS.gene061784.t1 | MTR_4g121840 | 53.147 | 143 | 64 | 1 | 12 | 151 | 26 | 168 | 1.75e-34 | 143 |
| MS.gene061784.t1 | MTR_8g090200 | 61.004 | 259 | 84 | 5 | 121 | 366 | 14 | 268 | 2.47e-84 | 280 |
| MS.gene061784.t1 | MTR_8g090200 | 74.150 | 147 | 38 | 0 | 458 | 604 | 268 | 414 | 3.94e-66 | 229 |
| MS.gene061784.t1 | MTR_2g034650 | 33.065 | 620 | 370 | 14 | 434 | 1039 | 297 | 885 | 5.22e-84 | 293 |
| MS.gene061784.t1 | MTR_2g034650 | 47.647 | 170 | 80 | 2 | 12 | 181 | 25 | 185 | 1.01e-40 | 163 |
| MS.gene061784.t1 | MTR_4g123740 | 61.017 | 59 | 22 | 1 | 74 | 132 | 6 | 63 | 1.71e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061784.t1 | AT2G22300 | 47.477 | 1110 | 457 | 28 | 5 | 1082 | 7 | 1022 | 0.0 | 903 |
| MS.gene061784.t1 | AT2G22300 | 47.477 | 1110 | 457 | 28 | 5 | 1082 | 7 | 1022 | 0.0 | 903 |
| MS.gene061784.t1 | AT5G64220 | 45.513 | 1092 | 499 | 29 | 3 | 1067 | 5 | 1027 | 0.0 | 850 |
| MS.gene061784.t1 | AT5G64220 | 45.513 | 1092 | 499 | 29 | 3 | 1067 | 5 | 1027 | 0.0 | 850 |
| MS.gene061784.t1 | AT2G22300 | 47.448 | 1058 | 430 | 28 | 57 | 1082 | 1 | 964 | 0.0 | 843 |
| MS.gene061784.t1 | AT5G09410 | 49.629 | 673 | 291 | 14 | 436 | 1082 | 231 | 881 | 0.0 | 617 |
| MS.gene061784.t1 | AT5G09410 | 49.629 | 673 | 291 | 14 | 436 | 1082 | 352 | 1002 | 0.0 | 616 |
| MS.gene061784.t1 | AT5G09410 | 62.963 | 162 | 58 | 2 | 12 | 173 | 17 | 176 | 3.07e-57 | 215 |
| MS.gene061784.t1 | AT5G09410 | 49.629 | 673 | 291 | 14 | 436 | 1082 | 411 | 1061 | 0.0 | 616 |
| MS.gene061784.t1 | AT5G09410 | 53.125 | 192 | 58 | 3 | 12 | 173 | 76 | 265 | 5.31e-52 | 199 |
| MS.gene061784.t1 | AT5G09410 | 49.629 | 673 | 291 | 14 | 436 | 1082 | 334 | 984 | 0.0 | 616 |
| MS.gene061784.t1 | AT5G09410 | 62.963 | 162 | 58 | 2 | 12 | 173 | 17 | 176 | 2.88e-57 | 215 |
| MS.gene061784.t1 | AT1G67310 | 40.391 | 562 | 287 | 11 | 501 | 1040 | 442 | 977 | 5.23e-105 | 353 |
| MS.gene061784.t1 | AT1G67310 | 47.333 | 150 | 69 | 1 | 12 | 161 | 37 | 176 | 3.61e-39 | 158 |
| MS.gene061784.t1 | AT3G16940 | 32.154 | 622 | 369 | 14 | 434 | 1039 | 217 | 801 | 4.69e-79 | 277 |
| MS.gene061784.t1 | AT3G16940 | 55.645 | 124 | 55 | 0 | 16 | 139 | 1 | 124 | 3.82e-37 | 151 |
| MS.gene061784.t1 | AT3G16940 | 32.154 | 622 | 369 | 14 | 434 | 1039 | 244 | 828 | 7.12e-79 | 277 |
| MS.gene061784.t1 | AT3G16940 | 54.688 | 128 | 58 | 0 | 12 | 139 | 24 | 151 | 2.88e-38 | 155 |
| MS.gene061784.t1 | AT3G16940 | 30.667 | 525 | 319 | 13 | 434 | 942 | 244 | 739 | 1.80e-54 | 204 |
| MS.gene061784.t1 | AT3G16940 | 54.688 | 128 | 58 | 0 | 12 | 139 | 24 | 151 | 1.43e-38 | 155 |
Find 213 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTATTGGGTTCTGTTTC+AGG | 0.110677 | 4.3:-10150811 | None:intergenic |
| TCCAACATTGTTAATGTATT+TGG | 0.116953 | 4.3:-10150692 | None:intergenic |
| GATAGGGGACAGTTAGAATA+AGG | 0.169692 | 4.3:-10150261 | None:intergenic |
| ATTCCCCTTCTAGTGCTTAT+TGG | 0.214001 | 4.3:+10151791 | MS.gene061784:CDS |
| TGTTATAGTTAGTGAGAATT+TGG | 0.234871 | 4.3:-10148365 | None:intergenic |
| GAATACGATGGTGACAAATT+TGG | 0.239421 | 4.3:+10153822 | MS.gene061784:CDS |
| GAAATTTACCTTTGAGAGAT+AGG | 0.252450 | 4.3:-10150278 | None:intergenic |
| ACTATTGATTCCCGTGTTAT+TGG | 0.255860 | 4.3:-10150824 | None:intergenic |
| TGTGAACTCTCAAAAGTTCT+TGG | 0.257449 | 4.3:+10150721 | MS.gene061784:CDS |
| TCTACGTAACATGTTCTAAT+AGG | 0.258394 | 4.3:+10152370 | MS.gene061784:CDS |
| GCAAGATATCTTAGAAAATA+AGG | 0.263006 | 4.3:+10150756 | MS.gene061784:CDS |
| GCCTGAATAGGCACTATCTT+TGG | 0.278496 | 4.3:-10151440 | None:intergenic |
| TTCCCCTTCTAGTGCTTATT+GGG | 0.285574 | 4.3:+10151792 | MS.gene061784:CDS |
| AGCAACAATTGTTGGTTCTA+AGG | 0.288908 | 4.3:-10152826 | None:intergenic |
| ATTTGAAGACTCGGAAATTA+AGG | 0.297823 | 4.3:+10151948 | MS.gene061784:CDS |
| AAAACTATGGGAAGATAATT+TGG | 0.298279 | 4.3:+10154159 | MS.gene061784:CDS |
| CCACCTTCATCTAATACATT+TGG | 0.299243 | 4.3:-10152759 | None:intergenic |
| GTGAACTTTCGCGATGTAAA+TGG | 0.307864 | 4.3:+10152858 | MS.gene061784:CDS |
| ATACCTTCACTTCCCGATAA+TGG | 0.312933 | 4.3:-10149649 | None:intergenic |
| TGAAACTGTCGAGCTTCTTC+AGG | 0.320899 | 4.3:-10151720 | None:intergenic |
| CGTTGATCTTGAAGCATTGT+TGG | 0.336518 | 4.3:+10154817 | MS.gene061784:CDS |
| TTGCTTCCCTCATATCTCTT+GGG | 0.341997 | 4.3:+10153472 | MS.gene061784:CDS |
| CAGCCTTTCTTGGCTACGAT+TGG | 0.345539 | 4.3:+10152802 | MS.gene061784:CDS |
| CCCAAAGATAGTGCCTATTC+AGG | 0.346532 | 4.3:+10151439 | MS.gene061784:CDS |
| GATACAGTTGAAAGCGAAAA+TGG | 0.348848 | 4.3:+10151814 | MS.gene061784:CDS |
| CAGCTGAAGCTGAAGGAAAT+TGG | 0.351228 | 4.3:+10150926 | MS.gene061784:CDS |
| GACAAGTTAAAATCAGATCT+AGG | 0.361350 | 4.3:+10151613 | MS.gene061784:CDS |
| CACCTTCATCTAATACATTT+GGG | 0.362638 | 4.3:-10152758 | None:intergenic |
| GGCATGCATTAAAGTTGCTT+TGG | 0.362966 | 4.3:-10149870 | None:intergenic |
| GGCTATTTCTGAGGGAACTA+TGG | 0.368661 | 4.3:+10154256 | MS.gene061784:CDS |
| ATGAAGCAGAAGATTGTAAA+TGG | 0.369204 | 4.3:+10152250 | MS.gene061784:CDS |
| GTCGGTTGGGATTGTGGAAA+AGG | 0.373416 | 4.3:+10154181 | MS.gene061784:CDS |
| GTTGCTTCCCTCATATCTCT+TGG | 0.375690 | 4.3:+10153471 | MS.gene061784:CDS |
| CTATTGATTCCCGTGTTATT+GGG | 0.377443 | 4.3:-10150823 | None:intergenic |
| ATTCAATAGCCATGCAAATT+CGG | 0.381684 | 4.3:+10150179 | MS.gene061784:CDS |
| AGCTGATCATAGCAAATAGA+TGG | 0.386884 | 4.3:-10151892 | None:intergenic |
| TGAAATTGTGATAGATGATC+AGG | 0.393656 | 4.3:+10150612 | MS.gene061784:intron |
| ATGGATGGACTGCTCTTCAT+TGG | 0.403464 | 4.3:+10152877 | MS.gene061784:CDS |
| ACCAAATACATTAACAATGT+TGG | 0.404096 | 4.3:+10150691 | MS.gene061784:CDS |
| TGGTATTGGTCTCTTGCATC+TGG | 0.406003 | 4.3:-10154395 | None:intergenic |
| CCATGCCCACAACATCCTTC+TGG | 0.406110 | 4.3:+10153519 | MS.gene061784:CDS |
| TTAGAAAAGATGGACATAAC+TGG | 0.406867 | 4.3:+10148577 | MS.gene061784:CDS |
| GGAAGATAATTTGGTCGGTT+GGG | 0.407139 | 4.3:+10154168 | MS.gene061784:CDS |
| CATTCAACAACCTGTGGTAT+TGG | 0.408725 | 4.3:-10154409 | None:intergenic |
| ACGTGAGAGGTCACCAGGTT+AGG | 0.411787 | 4.3:+10154135 | MS.gene061784:CDS |
| ACATCGTTCTAGTCCATTAT+CGG | 0.412410 | 4.3:+10149636 | MS.gene061784:CDS |
| GTATCCCAATAAGCACTAGA+AGG | 0.413133 | 4.3:-10151796 | None:intergenic |
| AATTTGGTCGGTTGGGATTG+TGG | 0.413549 | 4.3:+10154175 | MS.gene061784:CDS |
| GCCGACCTAGCTTCTGCAAA+TGG | 0.416041 | 4.3:+10153552 | MS.gene061784:CDS |
| TTTCCTTGTGAACAGGCCTC+TGG | 0.421100 | 4.3:+10151388 | MS.gene061784:intron |
| TTCACACCAGCAACAATTGT+TGG | 0.422507 | 4.3:-10152834 | None:intergenic |
| CTTCAGAAAACAACTGAAGA+TGG | 0.424083 | 4.3:+10152729 | MS.gene061784:CDS |
| TTAGAACCAACAATTGTTGC+TGG | 0.425908 | 4.3:+10152828 | MS.gene061784:CDS |
| CCTGAATAGGCACTATCTTT+GGG | 0.427656 | 4.3:-10151439 | None:intergenic |
| CATAGTTCTCCAAGTGCACC+TGG | 0.428531 | 4.3:-10151861 | None:intergenic |
| AACTGAGATACAAGAAAATC+AGG | 0.429890 | 4.3:+10154436 | MS.gene061784:CDS |
| GAATATGAAGAAGCTGAATC+AGG | 0.434942 | 4.3:+10150001 | MS.gene061784:CDS |
| CATTGATTATTCCCCAAGTT+GGG | 0.435352 | 4.3:+10151924 | MS.gene061784:CDS |
| ATAGGGGACAGTTAGAATAA+GGG | 0.437858 | 4.3:-10150260 | None:intergenic |
| GGGAAGATAATTTGGTCGGT+TGG | 0.442560 | 4.3:+10154167 | MS.gene061784:CDS |
| GCCAGTGAATCTTTCATTGA+AGG | 0.442930 | 4.3:-10153717 | None:intergenic |
| CAATTTCCTTCAGCTTCAGC+TGG | 0.443285 | 4.3:-10150925 | None:intergenic |
| CGTGTTGCAGCAACATGAAC+AGG | 0.444655 | 4.3:-10153918 | None:intergenic |
| AAATTTACCTTTGAGAGATA+GGG | 0.446563 | 4.3:-10150277 | None:intergenic |
| AGTTGATCATGTACAAGTTC+TGG | 0.447402 | 4.3:-10152666 | None:intergenic |
| AATGCGAAGTCACACAAGTC+TGG | 0.449069 | 4.3:+10153882 | MS.gene061784:CDS |
| TCATTGATTATTCCCCAAGT+TGG | 0.450073 | 4.3:+10151923 | MS.gene061784:CDS |
| TATTCCTTCCCAGGTGCACT+TGG | 0.450888 | 4.3:+10151852 | MS.gene061784:CDS |
| ACAACAGAGAACACTATTCC+TGG | 0.452005 | 4.3:-10152313 | None:intergenic |
| AGCCTTTCTTGGCTACGATT+GGG | 0.452371 | 4.3:+10152803 | MS.gene061784:CDS |
| TGTAAATGGTCATGCATGTT+CGG | 0.458202 | 4.3:+10152264 | MS.gene061784:CDS |
| GAGTCTTCAAATGCCCAACT+TGG | 0.460974 | 4.3:-10151937 | None:intergenic |
| AGTAAAATCAGTTCTTTGCT+TGG | 0.461341 | 4.3:+10152585 | MS.gene061784:CDS |
| CAGTTCTTTGCTTGGTAGGA+AGG | 0.462643 | 4.3:+10152593 | MS.gene061784:CDS |
| TTAGAACATGTTACGTAGAA+AGG | 0.466234 | 4.3:-10152366 | None:intergenic |
| AATGGACACAAAGGAATTGC+TGG | 0.466727 | 4.3:+10153570 | MS.gene061784:CDS |
| ATATTACGTTGGCGTCGAAA+AGG | 0.469061 | 4.3:+10154206 | MS.gene061784:CDS |
| ACGAGATACTTTAGAAAAGA+TGG | 0.469912 | 4.3:+10148567 | MS.gene061784:CDS |
| GAAGTCTCTGCCTCTGTGTT+AGG | 0.470588 | 4.3:-10149944 | None:intergenic |
| ACCTCAACACAAGGCTGGAC+GGG | 0.474522 | 4.3:+10152341 | MS.gene061784:CDS |
| TCTCAAGGATATGAGACAAT+GGG | 0.476448 | 4.3:+10150850 | MS.gene061784:CDS |
| CCCGAGGGAAGTCATGCTCT+TGG | 0.481194 | 4.3:-10152521 | None:intergenic |
| ATATCTCTTGGGGCAGCACC+AGG | 0.481476 | 4.3:+10153483 | MS.gene061784:CDS |
| ATTCCAGAGAAAACAACAAA+AGG | 0.481483 | 4.3:+10153800 | MS.gene061784:CDS |
| CCCAAGAGCATGACTTCCCT+CGG | 0.481534 | 4.3:+10152520 | MS.gene061784:CDS |
| TGGATGGACTGCTCTTCATT+GGG | 0.482883 | 4.3:+10152878 | MS.gene061784:CDS |
| CCGAGGGAAGTCATGCTCTT+GGG | 0.487143 | 4.3:-10152520 | None:intergenic |
| GGGATCGATAAAAGCCTAGT+TGG | 0.487311 | 4.3:+10151634 | MS.gene061784:CDS |
| CTCACACGATGAGCCTGAAT+AGG | 0.489940 | 4.3:-10151452 | None:intergenic |
| CTAGTTCTTTACTCATCCAT+CGG | 0.491817 | 4.3:-10151744 | None:intergenic |
| GGCTCACGTGAGAGGTCACC+AGG | 0.496633 | 4.3:+10154130 | MS.gene061784:intron |
| GTTTCAGGAAAAGACTGAAA+AGG | 0.498768 | 4.3:-10150796 | None:intergenic |
| TGCTTCCCTCATATCTCTTG+GGG | 0.499217 | 4.3:+10153473 | MS.gene061784:CDS |
| TTGGTAGGAAGGACGATGAA+TGG | 0.501312 | 4.3:+10152604 | MS.gene061784:CDS |
| AAATCAGTTCTTTGCTTGGT+AGG | 0.505479 | 4.3:+10152589 | MS.gene061784:CDS |
| CGTTGGCGTCGAAAAGGTAG+TGG | 0.510926 | 4.3:+10154212 | MS.gene061784:CDS |
| TTCAGAACAAGTTTCGCAGT+TGG | 0.512320 | 4.3:+10153943 | MS.gene061784:CDS |
| AGTCTTCAAATGCCCAACTT+GGG | 0.512638 | 4.3:-10151936 | None:intergenic |
| CCAGAAGGATGTTGTGGGCA+TGG | 0.516822 | 4.3:-10153519 | None:intergenic |
| ACCTTCAATGAAAGATTCAC+TGG | 0.517231 | 4.3:+10153716 | MS.gene061784:CDS |
| TTTGTTGGTGTGTATGAAGA+AGG | 0.517240 | 4.3:-10151540 | None:intergenic |
| AATTTCTTCAATATCTGTTG+TGG | 0.517632 | 4.3:-10148298 | None:intergenic |
| AAGGTTGCCTGTCATTCCTC+AGG | 0.518272 | 4.3:+10150636 | MS.gene061784:CDS |
| CATGGATCAGTAAGTGCTCC+TGG | 0.519816 | 4.3:-10153501 | None:intergenic |
| TGGTAGGAAGGACGATGAAT+GGG | 0.520017 | 4.3:+10152605 | MS.gene061784:CDS |
| CAGTACAACTATTCCTTCCC+AGG | 0.520858 | 4.3:+10151843 | MS.gene061784:CDS |
| GAACAAGTTTCGCAGTTGGA+AGG | 0.521020 | 4.3:+10153947 | MS.gene061784:CDS |
| CATCGTTCTAGTCCATTATC+GGG | 0.523240 | 4.3:+10149637 | MS.gene061784:CDS |
| CTTCTTGAGTATAATTGACT+CGG | 0.525223 | 4.3:-10152425 | None:intergenic |
| TGTGTCCATTTGCAGAAGCT+AGG | 0.527068 | 4.3:-10153557 | None:intergenic |
| GGCCCAATCGTAGCCAAGAA+AGG | 0.527167 | 4.3:-10152805 | None:intergenic |
| GATATCTTAGAAAATAAGGC+TGG | 0.527732 | 4.3:+10150760 | MS.gene061784:CDS |
| TAGTTATAGTGACAATGAGC+AGG | 0.528100 | 4.3:+10151477 | MS.gene061784:CDS |
| ACAAGTTAAAATCAGATCTA+GGG | 0.529700 | 4.3:+10151614 | MS.gene061784:CDS |
| TTCAGAAAACAACTGAAGAT+GGG | 0.530144 | 4.3:+10152730 | MS.gene061784:CDS |
| AAGTGCCGGCAGAGATAACC+AGG | 0.530702 | 4.3:+10152295 | MS.gene061784:CDS |
| TTCTCCAAGTGCACCTGGGA+AGG | 0.531264 | 4.3:-10151856 | None:intergenic |
| CTATTCCTGGTTATCTCTGC+CGG | 0.532774 | 4.3:-10152300 | None:intergenic |
| GGCCCAAATGTATTAGATGA+AGG | 0.533133 | 4.3:+10152756 | MS.gene061784:CDS |
| GCACTTGGAGAACTATGTAC+TGG | 0.534994 | 4.3:+10151867 | MS.gene061784:CDS |
| TTCTACCAGAAGGATGTTGT+GGG | 0.536843 | 4.3:-10153524 | None:intergenic |
| CAAATCAGAGGCTATTTCTG+AGG | 0.541683 | 4.3:+10154247 | MS.gene061784:CDS |
| GTGCTGCCCCAAGAGATATG+AGG | 0.541703 | 4.3:-10153479 | None:intergenic |
| AACAAGTTTCGCAGTTGGAA+GGG | 0.542396 | 4.3:+10153948 | MS.gene061784:CDS |
| CACCTCAACACAAGGCTGGA+CGG | 0.542743 | 4.3:+10152340 | MS.gene061784:CDS |
| AGCTCGACAGTTTCAACCGA+TGG | 0.542906 | 4.3:+10151728 | MS.gene061784:CDS |
| ACCCGTCCAGCCTTGTGTTG+AGG | 0.545426 | 4.3:-10152342 | None:intergenic |
| TCATCCACCTGAGGAATGAC+AGG | 0.545608 | 4.3:-10150643 | None:intergenic |
| TATTACAAGCACAATATCGA+TGG | 0.548796 | 4.3:+10148322 | MS.gene061784:CDS |
| GAGTGTCTTCTATTCCAACT+AGG | 0.550195 | 4.3:-10151648 | None:intergenic |
| AGTGTATCTGTGGCAGAAGA+GGG | 0.550559 | 4.3:+10151697 | MS.gene061784:CDS |
| TTTGCAGAAGCTAGGTCGGC+TGG | 0.551088 | 4.3:-10153549 | None:intergenic |
| AGAATTTGGCAAATTTCAGC+CGG | 0.551681 | 4.3:-10148351 | None:intergenic |
| TGAAGCTGAAGGAAATTGGC+AGG | 0.551960 | 4.3:+10150930 | MS.gene061784:CDS |
| TGGAAAAGGTTATATTACGT+TGG | 0.554077 | 4.3:+10154195 | MS.gene061784:CDS |
| TATCCCAATAAGCACTAGAA+GGG | 0.554536 | 4.3:-10151795 | None:intergenic |
| AATTTACCTTTGAGAGATAG+GGG | 0.555076 | 4.3:-10150276 | None:intergenic |
| CGATGGATGAGTAAAGAACT+AGG | 0.555800 | 4.3:+10151745 | MS.gene061784:CDS |
| AAGTGTATCTGTGGCAGAAG+AGG | 0.556458 | 4.3:+10151696 | MS.gene061784:CDS |
| TTTATACCAGCTGAAGCTGA+AGG | 0.559293 | 4.3:+10150919 | MS.gene061784:CDS |
| GCAGGAAGCAAACTGAGAAA+AGG | 0.561949 | 4.3:+10154330 | MS.gene061784:CDS |
| GTATTAGATGAAGGTGGCCA+AGG | 0.562370 | 4.3:+10152765 | MS.gene061784:CDS |
| AAATCAGAGGCTATTTCTGA+GGG | 0.564813 | 4.3:+10154248 | MS.gene061784:CDS |
| ACAATATCGATGGCTACGTC+CGG | 0.566740 | 4.3:+10148332 | MS.gene061784:CDS |
| TTGTATGTTTGTTGATCACA+AGG | 0.569291 | 4.3:-10149914 | None:intergenic |
| AAGTTGGGCATTTGAAGACT+CGG | 0.569405 | 4.3:+10151939 | MS.gene061784:CDS |
| CTGCAAAATGAAGCACACCT+TGG | 0.570206 | 4.3:-10152782 | None:intergenic |
| TCCATTTGCAGAAGCTAGGT+CGG | 0.576737 | 4.3:-10153553 | None:intergenic |
| GTCTTCAAATGCCCAACTTG+GGG | 0.578425 | 4.3:-10151935 | None:intergenic |
| TATACACCTCAACACAAGGC+TGG | 0.578694 | 4.3:+10152336 | MS.gene061784:CDS |
| ATACTGTTTAGTAATGCTGA+TGG | 0.578753 | 4.3:-10150884 | None:intergenic |
| GCTAATTTCTAAGTGGCTGT+AGG | 0.578993 | 4.3:-10154857 | None:intergenic |
| AACTGTCCCCTATCTCTCAA+AGG | 0.580934 | 4.3:+10150270 | MS.gene061784:CDS |
| GGCACTATCTTTGGGCCATG+TGG | 0.581003 | 4.3:-10151431 | None:intergenic |
| GGAATCAATAGTACTTCTCA+AGG | 0.582466 | 4.3:+10150835 | MS.gene061784:CDS |
| CCAAGAGCATGACTTCCCTC+GGG | 0.583296 | 4.3:+10152521 | MS.gene061784:CDS |
| GTTCGGCGAGATAGAAGTGC+CGG | 0.585098 | 4.3:+10152281 | MS.gene061784:CDS |
| CTATGGGAAGATAATTTGGT+CGG | 0.585590 | 4.3:+10154163 | MS.gene061784:CDS |
| TCATACACACCAACAAAACA+AGG | 0.587677 | 4.3:+10151546 | MS.gene061784:CDS |
| GAAGCAAACTGAGAAAAGGT+TGG | 0.588658 | 4.3:+10154334 | MS.gene061784:CDS |
| TTCTCAAGGATATGAGACAA+TGG | 0.588805 | 4.3:+10150849 | MS.gene061784:CDS |
| TGCTGCCCCAAGAGATATGA+GGG | 0.589348 | 4.3:-10153478 | None:intergenic |
| GTTCTACCAGAAGGATGTTG+TGG | 0.592131 | 4.3:-10153525 | None:intergenic |
| TTATTATAGGCTCACGTGAG+AGG | 0.593673 | 4.3:+10154122 | MS.gene061784:intron |
| AGTAGAAATCCGAATTTGCA+TGG | 0.594305 | 4.3:-10150188 | None:intergenic |
| TAAAAGATAAACTACATGCA+TGG | 0.594674 | 4.3:+10152703 | MS.gene061784:CDS |
| CCATTGACTTCACTCTAGCA+AGG | 0.595945 | 4.3:-10154364 | None:intergenic |
| TTGCACTGCTACTACGCCCA+TGG | 0.597003 | 4.3:+10148896 | MS.gene061784:CDS |
| CGAAAAGGTAGTGGTTTGCG+TGG | 0.599858 | 4.3:+10154221 | MS.gene061784:CDS |
| CATTGACTTCACTCTAGCAA+GGG | 0.600713 | 4.3:-10154363 | None:intergenic |
| CCTTGCTAGAGTGAAGTCAA+TGG | 0.603870 | 4.3:+10154364 | MS.gene061784:CDS |
| TTGTTATACACCTCAACACA+AGG | 0.604166 | 4.3:+10152332 | MS.gene061784:CDS |
| ATTCTTTAAGCGCATCCACA+TGG | 0.606620 | 4.3:+10151416 | MS.gene061784:CDS |
| AGAAACATGAGAGAAACCGT+TGG | 0.609159 | 4.3:+10153645 | MS.gene061784:CDS |
| GACTCTATTAAGTGTATCTG+TGG | 0.611735 | 4.3:+10151687 | MS.gene061784:CDS |
| ATTGCTGCTTCTGATCTCAC+CGG | 0.611990 | 4.3:-10152457 | None:intergenic |
| ACTCAAGAAGTCAACACTGC+CGG | 0.614091 | 4.3:+10152438 | MS.gene061784:CDS |
| AGTCCATTATCGGGAAGTGA+AGG | 0.615277 | 4.3:+10149646 | MS.gene061784:CDS |
| TCGGCTGGTGTTCTACCAGA+AGG | 0.617785 | 4.3:-10153534 | None:intergenic |
| TTGTGATAGATGATCAGGAA+AGG | 0.618020 | 4.3:+10150617 | MS.gene061784:intron |
| GTTGCCTGTCATTCCTCAGG+TGG | 0.619752 | 4.3:+10150639 | MS.gene061784:CDS |
| CTATTCAGGCTCATCGTGTG+AGG | 0.626917 | 4.3:+10151453 | MS.gene061784:CDS |
| ATGAAGAAGGAACTGTTCCA+AGG | 0.628051 | 4.3:-10151527 | None:intergenic |
| ACTTTCGCGATGTAAATGGA+TGG | 0.628820 | 4.3:+10152862 | MS.gene061784:CDS |
| TCTGAGGGAACTATGGTACA+AGG | 0.629731 | 4.3:+10154263 | MS.gene061784:CDS |
| GATGGACGCTAATTTCTAAG+TGG | 0.633815 | 4.3:-10154864 | None:intergenic |
| TGACCACTGTTAATGCTAGA+CGG | 0.638659 | 4.3:-10149971 | None:intergenic |
| ATCCCAATAAGCACTAGAAG+GGG | 0.640484 | 4.3:-10151794 | None:intergenic |
| GCTTCTGCAAATGGACACAA+AGG | 0.643597 | 4.3:+10153561 | MS.gene061784:CDS |
| GGAAGCTCATGAGAGACTCA+AGG | 0.645990 | 4.3:+10148629 | MS.gene061784:CDS |
| TGAAACAGAACCCAATAACA+CGG | 0.650306 | 4.3:+10150813 | MS.gene061784:CDS |
| AAAACAACTGAAGATGGGAA+AGG | 0.651527 | 4.3:+10152735 | MS.gene061784:CDS |
| TAATCGAATCTAAATCCCGA+GGG | 0.653442 | 4.3:-10152536 | None:intergenic |
| CCAAATGTATTAGATGAAGG+TGG | 0.656043 | 4.3:+10152759 | MS.gene061784:CDS |
| ATGCAAGAGACCAATACCAC+AGG | 0.658465 | 4.3:+10154399 | MS.gene061784:CDS |
| CTAATCGAATCTAAATCCCG+AGG | 0.658480 | 4.3:-10152537 | None:intergenic |
| GAAACAGAACCCAATAACAC+GGG | 0.662228 | 4.3:+10150814 | MS.gene061784:CDS |
| ACGAACTTACTGGATGCTTG+AGG | 0.663844 | 4.3:+10148943 | MS.gene061784:CDS |
| TTACCGTCTAGCATTAACAG+TGG | 0.677007 | 4.3:+10149968 | MS.gene061784:CDS |
| GAAAAGATGGACATAACTGG+AGG | 0.677852 | 4.3:+10148580 | MS.gene061784:CDS |
| ATGGACTGCTCTTCATTGGG+CGG | 0.678377 | 4.3:+10152881 | MS.gene061784:CDS |
| AAACAACAAAAGGAATACGA+TGG | 0.685779 | 4.3:+10153810 | MS.gene061784:CDS |
| TTTGCGTGGATTCAAATCAG+AGG | 0.685933 | 4.3:+10154235 | MS.gene061784:CDS |
| TTACAACATTCAACAACCTG+TGG | 0.686006 | 4.3:-10154415 | None:intergenic |
| AAAATCGTAGTCATCCTCAG+TGG | 0.687131 | 4.3:-10154297 | None:intergenic |
| ATAGTTCTCCAAGTGCACCT+GGG | 0.691663 | 4.3:-10151860 | None:intergenic |
| CTCAAGGATATGAGACAATG+GGG | 0.695507 | 4.3:+10150851 | MS.gene061784:CDS |
| ATACTTGGAGGCATATACGA+AGG | 0.704350 | 4.3:-10148408 | None:intergenic |
| GCTTAAAGAATTAAAACCAG+AGG | 0.714724 | 4.3:-10151404 | None:intergenic |
| CAAAGTTATGCCTAACACAG+AGG | 0.717841 | 4.3:+10149934 | MS.gene061784:CDS |
| AGTAAGATATCATCCACCTG+AGG | 0.729515 | 4.3:-10150652 | None:intergenic |
| AGGTGTATCATCTTCCACTG+AGG | 0.765631 | 4.3:+10154283 | MS.gene061784:CDS |
| ACAATGCTTCAAGATCAACG+AGG | 0.891821 | 4.3:-10154814 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGTTATTAAAAAAACA+TGG | + | chr4.3:10152097-10152116 | MS.gene061784:intron | 10.0% |
| !! | AATAAATAATTTATAATCCT+TGG | + | chr4.3:10149040-10149059 | MS.gene061784:intron | 10.0% |
| !!! | AAATTATTTAGTTTTAAATC+AGG | + | chr4.3:10151088-10151107 | MS.gene061784:intron | 10.0% |
| !! | ATATTAAAATAGATACAAGA+AGG | - | chr4.3:10150134-10150153 | None:intergenic | 15.0% |
| !! | GAAGAATAAAAAAATAAAGA+AGG | - | chr4.3:10150105-10150124 | None:intergenic | 15.0% |
| !!! | AACATATCTTTCTAATTTTA+CGG | + | chr4.3:10148817-10148836 | MS.gene061784:intron | 15.0% |
| !!! | GAAATTGCTAATTTTTTTTT+TGG | + | chr4.3:10149532-10149551 | MS.gene061784:intron | 15.0% |
| !!! | TTTCAATTTTACAATTAGTA+TGG | - | chr4.3:10150597-10150616 | None:intergenic | 15.0% |
| !! | AAAACATATAGTGTGAAATT+TGG | - | chr4.3:10154504-10154523 | None:intergenic | 20.0% |
| !! | AATTAAATGATATTAACTGC+TGG | - | chr4.3:10154686-10154705 | None:intergenic | 20.0% |
| !! | ACATTCTTAGTAACAATTTA+AGG | + | chr4.3:10149751-10149770 | MS.gene061784:intron | 20.0% |
| !! | ATAATAAGTTAGAGGATTAA+AGG | - | chr4.3:10154109-10154128 | None:intergenic | 20.0% |
| !! | GTTACAACTTTAATCTAAAT+TGG | + | chr4.3:10148706-10148725 | MS.gene061784:intron | 20.0% |
| !! | TCATATGTTATTCAATGTAA+TGG | - | chr4.3:10148849-10148868 | None:intergenic | 20.0% |
| !! | TGATTAATAAAATTCCGTTA+AGG | + | chr4.3:10149089-10149108 | MS.gene061784:intron | 20.0% |
| !! | TTAATCCTCTAACTTATTAT+AGG | + | chr4.3:10154109-10154128 | MS.gene061784:intron | 20.0% |
| !! | TTTATATATTCCGATAATGT+TGG | + | chr4.3:10150539-10150558 | MS.gene061784:intron | 20.0% |
| !!! | AAAAATTTAAAGACTAGTCA+AGG | + | chr4.3:10151271-10151290 | MS.gene061784:intron | 20.0% |
| !!! | ACTACTAATATCAATTTTAC+AGG | + | chr4.3:10152194-10152213 | MS.gene061784:intron | 20.0% |
| !!! | ATTAGATTCTTCATTTTCTT+TGG | - | chr4.3:10149894-10149913 | None:intergenic | 20.0% |
| !!! | ATTGCTAATTTTTTTTTTGG+TGG | + | chr4.3:10149535-10149554 | MS.gene061784:intron | 20.0% |
| !!! | CAACAATTTATTTTGATGTA+CGG | + | chr4.3:10150319-10150338 | MS.gene061784:intron | 20.0% |
| !!! | CTTTTAAAAGTATTTCATGA+GGG | - | chr4.3:10151588-10151607 | None:intergenic | 20.0% |
| !!! | GAATACCTATATTACTTTTA+AGG | - | chr4.3:10149825-10149844 | None:intergenic | 20.0% |
| !!! | GATACTTTTAATAAACGATT+TGG | + | chr4.3:10152486-10152505 | MS.gene061784:CDS | 20.0% |
| !!! | GTATAAGTTGTTATTACAAT+TGG | - | chr4.3:10149207-10149226 | None:intergenic | 20.0% |
| !!! | TGATTTTTCAATTTTCATTG+AGG | + | chr4.3:10153413-10153432 | MS.gene061784:intron | 20.0% |
| !!! | TTACTAGTTTATCAGAAATA+CGG | + | chr4.3:10154569-10154588 | MS.gene061784:intron | 20.0% |
| !!! | TTTTATGAATTGTGATGTTT+TGG | + | chr4.3:10148497-10148516 | MS.gene061784:intron | 20.0% |
| ! | AAAAAGATGGAAAAACTGTT+AGG | + | chr4.3:10148607-10148626 | MS.gene061784:CDS | 25.0% |
| ! | AAAACTATGGGAAGATAATT+TGG | + | chr4.3:10154159-10154178 | MS.gene061784:CDS | 25.0% |
| ! | AAAAGATGGAAAAACTGTTA+GGG | + | chr4.3:10148608-10148627 | MS.gene061784:CDS | 25.0% |
| ! | AATATGCTTCATTTCATCAT+AGG | + | chr4.3:10153116-10153135 | MS.gene061784:intron | 25.0% |
| ! | AATGTCATTAAAATCAATCC+TGG | + | chr4.3:10148771-10148790 | MS.gene061784:intron | 25.0% |
| ! | AATTTCTTCAATATCTGTTG+TGG | - | chr4.3:10148301-10148320 | None:intergenic | 25.0% |
| ! | ACAAGTTAAAATCAGATCTA+GGG | + | chr4.3:10151614-10151633 | MS.gene061784:CDS | 25.0% |
| ! | ACCAAATACATTAACAATGT+TGG | + | chr4.3:10150691-10150710 | MS.gene061784:CDS | 25.0% |
| ! | ATACATGATTGATCGATAAA+AGG | - | chr4.3:10150375-10150394 | None:intergenic | 25.0% |
| ! | ATATGCTTCATTTCATCATA+GGG | + | chr4.3:10153117-10153136 | MS.gene061784:intron | 25.0% |
| ! | ATTAAAATCAATCCTGGAAT+AGG | + | chr4.3:10148777-10148796 | MS.gene061784:intron | 25.0% |
| ! | CTGTATAAAATATGTGAAAC+AGG | + | chr4.3:10153053-10153072 | MS.gene061784:intron | 25.0% |
| ! | GAATCAGAATTAATCATACT+TGG | - | chr4.3:10148426-10148445 | None:intergenic | 25.0% |
| ! | GCAAGATATCTTAGAAAATA+AGG | + | chr4.3:10150756-10150775 | MS.gene061784:CDS | 25.0% |
| ! | TAAAAGATAAACTACATGCA+TGG | + | chr4.3:10152703-10152722 | MS.gene061784:CDS | 25.0% |
| ! | TACATGATTGATCGATAAAA+GGG | - | chr4.3:10150374-10150393 | None:intergenic | 25.0% |
| ! | TAGAATTACATGCTTTAACT+AGG | - | chr4.3:10149502-10149521 | None:intergenic | 25.0% |
| ! | TCCAACATTGTTAATGTATT+TGG | - | chr4.3:10150695-10150714 | None:intergenic | 25.0% |
| ! | TGACAATACATGAAACTAAT+AGG | + | chr4.3:10152987-10153006 | MS.gene061784:intron | 25.0% |
| ! | TGCTCATTTAAATAATCGAA+GGG | + | chr4.3:10153315-10153334 | MS.gene061784:intron | 25.0% |
| ! | TGTTATAGTTAGTGAGAATT+TGG | - | chr4.3:10148368-10148387 | None:intergenic | 25.0% |
| ! | TTAAAAAAACATGGTATCCA+TGG | + | chr4.3:10152106-10152125 | MS.gene061784:intron | 25.0% |
| ! | TTGGTCCTTAAAAGTAATAT+AGG | + | chr4.3:10149817-10149836 | MS.gene061784:intron | 25.0% |
| ! | TTTAGTGTGAGATTTGAAAA+TGG | - | chr4.3:10148987-10149006 | None:intergenic | 25.0% |
| ! | TTTGTACATAATTCATGCAA+AGG | - | chr4.3:10154038-10154057 | None:intergenic | 25.0% |
| !! | AAATTTACCTTTGAGAGATA+GGG | - | chr4.3:10150280-10150299 | None:intergenic | 25.0% |
| !! | ATACCTAAGGTTTTTATCTT+AGG | - | chr4.3:10148679-10148698 | None:intergenic | 25.0% |
| !! | GAATAACATATGATGTTTTC+AGG | + | chr4.3:10148856-10148875 | MS.gene061784:intron | 25.0% |
| !! | GCATTTTACTTTCATTATCA+GGG | + | chr4.3:10153440-10153459 | MS.gene061784:intron | 25.0% |
| !! | TACTAGTTTATCAGAAATAC+GGG | + | chr4.3:10154570-10154589 | MS.gene061784:intron | 25.0% |
| !! | TGCATTTTACTTTCATTATC+AGG | + | chr4.3:10153439-10153458 | MS.gene061784:intron | 25.0% |
| !!! | ACATATAATTTTTCAGTGCT+TGG | + | chr4.3:10149789-10149808 | MS.gene061784:intron | 25.0% |
| !!! | GCTTTTAAAAGTATTTCATG+AGG | - | chr4.3:10151589-10151608 | None:intergenic | 25.0% |
| !!! | TATTATTTTAGCATACCTCA+CGG | - | chr4.3:10153237-10153256 | None:intergenic | 25.0% |
| !!! | TCTAGAATAGAATTTTACTG+CGG | - | chr4.3:10150486-10150505 | None:intergenic | 25.0% |
| AAACAACAAAAGGAATACGA+TGG | + | chr4.3:10153810-10153829 | MS.gene061784:CDS | 30.0% | |
| AAAGTGCACTATATTGATGA+CGG | + | chr4.3:10152151-10152170 | MS.gene061784:intron | 30.0% | |
| AACCACTTAGTTATAAACCA+AGG | - | chr4.3:10149060-10149079 | None:intergenic | 30.0% | |
| AACCATAATGCAAAATCATC+AGG | + | chr4.3:10154648-10154667 | MS.gene061784:intron | 30.0% | |
| AACTGAGATACAAGAAAATC+AGG | + | chr4.3:10154436-10154455 | MS.gene061784:CDS | 30.0% | |
| ACAGCGAATTGTAAAAATTC+AGG | + | chr4.3:10153995-10154014 | MS.gene061784:CDS | 30.0% | |
| AGTAAAATCAGTTCTTTGCT+TGG | + | chr4.3:10152585-10152604 | MS.gene061784:CDS | 30.0% | |
| ATACTGTTTAGTAATGCTGA+TGG | - | chr4.3:10150887-10150906 | None:intergenic | 30.0% | |
| ATCAAGAATGCAAAACTTAG+AGG | + | chr4.3:10154594-10154613 | MS.gene061784:intron | 30.0% | |
| ATCCTTGGTTTATAACTAAG+TGG | + | chr4.3:10149055-10149074 | MS.gene061784:intron | 30.0% | |
| ATGAAGCAGAAGATTGTAAA+TGG | + | chr4.3:10152250-10152269 | MS.gene061784:CDS | 30.0% | |
| ATTCAATAGCCATGCAAATT+CGG | + | chr4.3:10150179-10150198 | MS.gene061784:CDS | 30.0% | |
| ATTCCAGAGAAAACAACAAA+AGG | + | chr4.3:10153800-10153819 | MS.gene061784:CDS | 30.0% | |
| ATTTGAAGACTCGGAAATTA+AGG | + | chr4.3:10151948-10151967 | MS.gene061784:CDS | 30.0% | |
| CAACCTAAGATAAAAACCTT+AGG | + | chr4.3:10148673-10148692 | MS.gene061784:intron | 30.0% | |
| CAAGTGCAGAATATCAAAAT+AGG | - | chr4.3:10151977-10151996 | None:intergenic | 30.0% | |
| CACCTTCATCTAATACATTT+GGG | - | chr4.3:10152761-10152780 | None:intergenic | 30.0% | |
| CATAGGGTTGAAAAATGAAA+AGG | + | chr4.3:10153133-10153152 | MS.gene061784:intron | 30.0% | |
| CTTCTTGAGTATAATTGACT+CGG | - | chr4.3:10152428-10152447 | None:intergenic | 30.0% | |
| GACAAGTTAAAATCAGATCT+AGG | + | chr4.3:10151613-10151632 | MS.gene061784:CDS | 30.0% | |
| GATATCTTAGAAAATAAGGC+TGG | + | chr4.3:10150760-10150779 | MS.gene061784:CDS | 30.0% | |
| GCTCATTTAAATAATCGAAG+GGG | + | chr4.3:10153316-10153335 | MS.gene061784:intron | 30.0% | |
| GCTTAAAGAATTAAAACCAG+AGG | - | chr4.3:10151407-10151426 | None:intergenic | 30.0% | |
| GTGCTCATTTAAATAATCGA+AGG | + | chr4.3:10153314-10153333 | MS.gene061784:intron | 30.0% | |
| GTTCTGTATAAGCTTCAATA+TGG | + | chr4.3:10151122-10151141 | MS.gene061784:intron | 30.0% | |
| TACAATTAGTATGGCATGTA+AGG | - | chr4.3:10150588-10150607 | None:intergenic | 30.0% | |
| TACATAATTCATGCAAAGGT+TGG | - | chr4.3:10154034-10154053 | None:intergenic | 30.0% | |
| TATTACAAGCACAATATCGA+TGG | + | chr4.3:10148322-10148341 | MS.gene061784:CDS | 30.0% | |
| TCAGAATTAATCATACTTGG+AGG | - | chr4.3:10148423-10148442 | None:intergenic | 30.0% | |
| TCTACGTAACATGTTCTAAT+AGG | + | chr4.3:10152370-10152389 | MS.gene061784:CDS | 30.0% | |
| TGAAATTGTGATAGATGATC+AGG | + | chr4.3:10150612-10150631 | MS.gene061784:intron | 30.0% | |
| TGAGATTCCATCAAATAACA+AGG | - | chr4.3:10149712-10149731 | None:intergenic | 30.0% | |
| TGGAAAAGGTTATATTACGT+TGG | + | chr4.3:10154195-10154214 | MS.gene061784:CDS | 30.0% | |
| TTAGAAAAGATGGACATAAC+TGG | + | chr4.3:10148577-10148596 | MS.gene061784:CDS | 30.0% | |
| TTAGAACATGTTACGTAGAA+AGG | - | chr4.3:10152369-10152388 | None:intergenic | 30.0% | |
| TTCAGAAAACAACTGAAGAT+GGG | + | chr4.3:10152730-10152749 | MS.gene061784:CDS | 30.0% | |
| TTCAGTTTATTTCCTATTCC+AGG | - | chr4.3:10148792-10148811 | None:intergenic | 30.0% | |
| TTGCACAGTTGTGAAAAAAA+TGG | - | chr4.3:10154530-10154549 | None:intergenic | 30.0% | |
| TTGGTTTATAACTAAGTGGT+TGG | + | chr4.3:10149059-10149078 | MS.gene061784:intron | 30.0% | |
| TTGTATTCGACATTGTTACA+GGG | + | chr4.3:10149604-10149623 | MS.gene061784:intron | 30.0% | |
| TTTGTATTCGACATTGTTAC+AGG | + | chr4.3:10149603-10149622 | MS.gene061784:intron | 30.0% | |
| ! | AATTTACCTTTGAGAGATAG+GGG | - | chr4.3:10150279-10150298 | None:intergenic | 30.0% |
| ! | ACGAGATACTTTAGAAAAGA+TGG | + | chr4.3:10148567-10148586 | MS.gene061784:CDS | 30.0% |
| ! | AGTTGTTATTACAATTGGAG+AGG | - | chr4.3:10149202-10149221 | None:intergenic | 30.0% |
| ! | ATTTTACAGGTTCTCATTTC+AGG | + | chr4.3:10152207-10152226 | MS.gene061784:intron | 30.0% |
| ! | ATTTTCAAAGACGAACTTAC+TGG | + | chr4.3:10148933-10148952 | MS.gene061784:CDS | 30.0% |
| ! | CTTTTGTAAATGCCTTTTGT+AGG | + | chr4.3:10154739-10154758 | MS.gene061784:intron | 30.0% |
| ! | GAAATGTGTCATTCTGATAT+TGG | + | chr4.3:10150982-10151001 | MS.gene061784:intron | 30.0% |
| ! | GAAATTTACCTTTGAGAGAT+AGG | - | chr4.3:10150281-10150300 | None:intergenic | 30.0% |
| ! | GAATTTTTACAATTCGCTGT+CGG | - | chr4.3:10153995-10154014 | None:intergenic | 30.0% |
| ! | TCTTAATTTTCCTTGTGAAC+AGG | + | chr4.3:10151381-10151400 | MS.gene061784:intron | 30.0% |
| ! | TTGTATGTTTGTTGATCACA+AGG | - | chr4.3:10149917-10149936 | None:intergenic | 30.0% |
| ! | TTTTCAGTGCTTGGTAAATT+TGG | + | chr4.3:10149798-10149817 | MS.gene061784:intron | 30.0% |
| ! | TTTTCTCTCTTTTTCTTCCA+TGG | - | chr4.3:10152126-10152145 | None:intergenic | 30.0% |
| ! | TTTTTCCATAACAAAAACGC+AGG | - | chr4.3:10153168-10153187 | None:intergenic | 30.0% |
| !! | AAAAGGCATTTACAAAAGAC+TGG | - | chr4.3:10154737-10154756 | None:intergenic | 30.0% |
| !! | ACTTTTCTTGTTTGATCGAA+AGG | + | chr4.3:10148542-10148561 | MS.gene061784:CDS | 30.0% |
| !! | AGTTGATTTTCAACAATCCT+TGG | + | chr4.3:10151510-10151529 | MS.gene061784:CDS | 30.0% |
| !! | TCTTTCTCCTTGTTATTTGA+TGG | + | chr4.3:10149702-10149721 | MS.gene061784:intron | 30.0% |
| !! | TGAATTGTGATGTTTTGGAT+TGG | + | chr4.3:10148502-10148521 | MS.gene061784:intron | 30.0% |
| !! | TTAAAAGAGTGTGACTTTTG+AGG | + | chr4.3:10150405-10150424 | MS.gene061784:intron | 30.0% |
| !!! | AATTGTCATTTTGTTCTCCA+TGG | - | chr4.3:10148916-10148935 | None:intergenic | 30.0% |
| !!! | ATTCCTTTTGTTGTTTTCTC+TGG | - | chr4.3:10153806-10153825 | None:intergenic | 30.0% |
| !!! | ATTGTCATTTTGTTCTCCAT+GGG | - | chr4.3:10148915-10148934 | None:intergenic | 30.0% |
| !!! | GACTACGATTTTTTGAAAGA+AGG | + | chr4.3:10154308-10154327 | MS.gene061784:CDS | 30.0% |
| !!! | TAAGCATTTTAACTTCTGCT+AGG | - | chr4.3:10153079-10153098 | None:intergenic | 30.0% |
| AAAACAACTGAAGATGGGAA+AGG | + | chr4.3:10152735-10152754 | MS.gene061784:CDS | 35.0% | |
| AAATCAGTTCTTTGCTTGGT+AGG | + | chr4.3:10152589-10152608 | MS.gene061784:CDS | 35.0% | |
| AACCATGTCTGCAAGTAAAA+TGG | + | chr4.3:10151028-10151047 | MS.gene061784:intron | 35.0% | |
| AACTGGAGGAAGAAAAAAGA+TGG | + | chr4.3:10148594-10148613 | MS.gene061784:CDS | 35.0% | |
| ACAACAGTTCAGTGAACATA+TGG | - | chr4.3:10152010-10152029 | None:intergenic | 35.0% | |
| ACATCCCTAACAAATAAAGG+TGG | + | chr4.3:10153286-10153305 | MS.gene061784:intron | 35.0% | |
| ACATCGTTCTAGTCCATTAT+CGG | + | chr4.3:10149636-10149655 | MS.gene061784:CDS | 35.0% | |
| ACCAGGTTAGGAAAAACTAT+GGG | + | chr4.3:10154147-10154166 | MS.gene061784:CDS | 35.0% | |
| ACCTTCAATGAAAGATTCAC+TGG | + | chr4.3:10153716-10153735 | MS.gene061784:CDS | 35.0% | |
| ACGACATCCCTAACAAATAA+AGG | + | chr4.3:10153283-10153302 | MS.gene061784:intron | 35.0% | |
| AGAATTTGGCAAATTTCAGC+CGG | - | chr4.3:10148354-10148373 | None:intergenic | 35.0% | |
| AGAGAACGATTTGACCTTAA+CGG | - | chr4.3:10149106-10149125 | None:intergenic | 35.0% | |
| AGCTGATCATAGCAAATAGA+TGG | - | chr4.3:10151895-10151914 | None:intergenic | 35.0% | |
| AGTAGAAATCCGAATTTGCA+TGG | - | chr4.3:10150191-10150210 | None:intergenic | 35.0% | |
| AGTGAACATATGGTCAAAAC+TGG | - | chr4.3:10152000-10152019 | None:intergenic | 35.0% | |
| AGTTGATCATGTACAAGTTC+TGG | - | chr4.3:10152669-10152688 | None:intergenic | 35.0% | |
| ATAGGGGACAGTTAGAATAA+GGG | - | chr4.3:10150263-10150282 | None:intergenic | 35.0% | |
| ATTAAGCGCTTATTCAGACA+AGG | - | chr4.3:10149251-10149270 | None:intergenic | 35.0% | |
| ATTGTCAAAGTGTATCGTGT+TGG | - | chr4.3:10152974-10152993 | None:intergenic | 35.0% | |
| CAATACCAATATGTGTGAGA+TGG | - | chr4.3:10149346-10149365 | None:intergenic | 35.0% | |
| CCAAATGTATTAGATGAAGG+TGG | + | chr4.3:10152759-10152778 | MS.gene061784:CDS | 35.0% | |
| CCACCTTCATCTAATACATT+TGG | - | chr4.3:10152762-10152781 | None:intergenic | 35.0% | |
| CTATGGGAAGATAATTTGGT+CGG | + | chr4.3:10154163-10154182 | MS.gene061784:CDS | 35.0% | |
| CTTCAGAAAACAACTGAAGA+TGG | + | chr4.3:10152729-10152748 | MS.gene061784:CDS | 35.0% | |
| GAATACGATGGTGACAAATT+TGG | + | chr4.3:10153822-10153841 | MS.gene061784:CDS | 35.0% | |
| GAATATGAAGAAGCTGAATC+AGG | + | chr4.3:10150001-10150020 | MS.gene061784:CDS | 35.0% | |
| GACTCTATTAAGTGTATCTG+TGG | + | chr4.3:10151687-10151706 | MS.gene061784:CDS | 35.0% | |
| GAGCAGTTAAATGAGTTTGA+TGG | - | chr4.3:10151352-10151371 | None:intergenic | 35.0% | |
| GATACAGTTGAAAGCGAAAA+TGG | + | chr4.3:10151814-10151833 | MS.gene061784:CDS | 35.0% | |
| GATCTTGCTTTACCTACAAA+AGG | - | chr4.3:10154754-10154773 | None:intergenic | 35.0% | |
| GGAATCAATAGTACTTCTCA+AGG | + | chr4.3:10150835-10150854 | MS.gene061784:CDS | 35.0% | |
| GGCTATTCAAAAAGTTCTCT+AGG | - | chr4.3:10150084-10150103 | None:intergenic | 35.0% | |
| GGGTTGAAAAATGAAAAGGT+TGG | + | chr4.3:10153137-10153156 | MS.gene061784:intron | 35.0% | |
| GTATTGCTGATCACATGTAT+TGG | - | chr4.3:10149460-10149479 | None:intergenic | 35.0% | |
| GTGAGCCTATAATAAGTTAG+AGG | - | chr4.3:10154117-10154136 | None:intergenic | 35.0% | |
| GTTTCAGGAAAAGACTGAAA+AGG | - | chr4.3:10150799-10150818 | None:intergenic | 35.0% | |
| TAATCGAATCTAAATCCCGA+GGG | - | chr4.3:10152539-10152558 | None:intergenic | 35.0% | |
| TAGTTATAGTGACAATGAGC+AGG | + | chr4.3:10151477-10151496 | MS.gene061784:CDS | 35.0% | |
| TATCCCAATAAGCACTAGAA+GGG | - | chr4.3:10151798-10151817 | None:intergenic | 35.0% | |
| TCATACACACCAACAAAACA+AGG | + | chr4.3:10151546-10151565 | MS.gene061784:CDS | 35.0% | |
| TCTCAAGGATATGAGACAAT+GGG | + | chr4.3:10150850-10150869 | MS.gene061784:CDS | 35.0% | |
| TGAAACAGAACCCAATAACA+CGG | + | chr4.3:10150813-10150832 | MS.gene061784:CDS | 35.0% | |
| TGTAAATGGTCATGCATGTT+CGG | + | chr4.3:10152264-10152283 | MS.gene061784:CDS | 35.0% | |
| TGTAACTGCAACAATACCTA+AGG | - | chr4.3:10148692-10148711 | None:intergenic | 35.0% | |
| TGTGAACTCTCAAAAGTTCT+TGG | + | chr4.3:10150721-10150740 | MS.gene061784:CDS | 35.0% | |
| TTACAACATTCAACAACCTG+TGG | - | chr4.3:10154418-10154437 | None:intergenic | 35.0% | |
| TTACTTTCATTATCAGGGAG+AGG | + | chr4.3:10153445-10153464 | MS.gene061784:intron | 35.0% | |
| TTAGAACCAACAATTGTTGC+TGG | + | chr4.3:10152828-10152847 | MS.gene061784:CDS | 35.0% | |
| TTCTCAAGGATATGAGACAA+TGG | + | chr4.3:10150849-10150868 | MS.gene061784:CDS | 35.0% | |
| TTGTGATAGATGATCAGGAA+AGG | + | chr4.3:10150617-10150636 | MS.gene061784:intron | 35.0% | |
| TTGTTATACACCTCAACACA+AGG | + | chr4.3:10152332-10152351 | MS.gene061784:CDS | 35.0% | |
| TTTGTTGGTGTGTATGAAGA+AGG | - | chr4.3:10151543-10151562 | None:intergenic | 35.0% | |
| ! | AAGTACCTGCGTTTTTGTTA+TGG | + | chr4.3:10153160-10153179 | MS.gene061784:intron | 35.0% |
| ! | ATCCATTTTACTTGCAGACA+TGG | - | chr4.3:10151033-10151052 | None:intergenic | 35.0% |
| ! | CAGACAAGGCTTTAACATAA+AGG | - | chr4.3:10149237-10149256 | None:intergenic | 35.0% |
| ! | CATTGATTATTCCCCAAGTT+GGG | + | chr4.3:10151924-10151943 | MS.gene061784:CDS | 35.0% |
| ! | CTAGTTCTTTACTCATCCAT+CGG | - | chr4.3:10151747-10151766 | None:intergenic | 35.0% |
| ! | CTCACCACCTTTATTTGTTA+GGG | - | chr4.3:10153293-10153312 | None:intergenic | 35.0% |
| ! | GCTTTAATCTTTTGAACAGC+AGG | - | chr4.3:10150234-10150253 | None:intergenic | 35.0% |
| ! | GTCCTGATGATTTTGCATTA+TGG | - | chr4.3:10154653-10154672 | None:intergenic | 35.0% |
| ! | GTCGTGTCTTTTAAATACAC+AGG | - | chr4.3:10153268-10153287 | None:intergenic | 35.0% |
| ! | TCATTGATTATTCCCCAAGT+TGG | + | chr4.3:10151923-10151942 | MS.gene061784:CDS | 35.0% |
| ! | TCTCACCACCTTTATTTGTT+AGG | - | chr4.3:10153294-10153313 | None:intergenic | 35.0% |
| ! | TTTTCTTCATTTGCTCTGCA+TGG | - | chr4.3:10149370-10149389 | None:intergenic | 35.0% |
| !! | AAAGAAGTACTTCCAGAGAT+AGG | - | chr4.3:10149563-10149582 | None:intergenic | 35.0% |
| !! | AAATCAGAGGCTATTTCTGA+GGG | + | chr4.3:10154248-10154267 | MS.gene061784:CDS | 35.0% |
| !! | AACATATGATGTTTTCAGGC+TGG | + | chr4.3:10148860-10148879 | MS.gene061784:intron | 35.0% |
| !! | AAGTTCTTGGCTTTTCATCA+TGG | + | chr4.3:10150734-10150753 | MS.gene061784:CDS | 35.0% |
| !! | ACTATTGATTCCCGTGTTAT+TGG | - | chr4.3:10150827-10150846 | None:intergenic | 35.0% |
| !! | AGCAACAATTGTTGGTTCTA+AGG | - | chr4.3:10152829-10152848 | None:intergenic | 35.0% |
| !! | AGCACTCATTGTTTTGTTCT+CGG | - | chr4.3:10153686-10153705 | None:intergenic | 35.0% |
| !! | CATCTTCAGTTGTTTTCTGA+AGG | - | chr4.3:10152731-10152750 | None:intergenic | 35.0% |
| !! | CTATTGATTCCCGTGTTATT+GGG | - | chr4.3:10150826-10150845 | None:intergenic | 35.0% |
| !!! | ACGATTTTTTGAAAGAAGGC+AGG | + | chr4.3:10154312-10154331 | MS.gene061784:CDS | 35.0% |
| !!! | GACTCTTTGTTTTGTTCCAA+CGG | - | chr4.3:10153664-10153683 | None:intergenic | 35.0% |
| !!! | GCATAAGAACCTTGTTTTGT+TGG | - | chr4.3:10151558-10151577 | None:intergenic | 35.0% |
| !!! | GTTTTGGATTGGTTGACAAT+AGG | + | chr4.3:10148513-10148532 | MS.gene061784:intron | 35.0% |
| !!! | TCTCTGGAAGTACTTCTTTT+AGG | + | chr4.3:10149564-10149583 | MS.gene061784:intron | 35.0% |
| !!! | TGATCAAGTTTTTTCCTCCA+GGG | + | chr4.3:10149845-10149864 | MS.gene061784:intron | 35.0% |
| AAAAATCACGAGTCTCACGT+TGG | - | chr4.3:10153401-10153420 | None:intergenic | 40.0% | |
| AAAATCGTAGTCATCCTCAG+TGG | - | chr4.3:10154300-10154319 | None:intergenic | 40.0% | |
| AACAAGTTTCGCAGTTGGAA+GGG | + | chr4.3:10153948-10153967 | MS.gene061784:CDS | 40.0% | |
| AAGTTGGGCATTTGAAGACT+CGG | + | chr4.3:10151939-10151958 | MS.gene061784:CDS | 40.0% | |
| AATGGACACAAAGGAATTGC+TGG | + | chr4.3:10153570-10153589 | MS.gene061784:CDS | 40.0% | |
| ACAACAGAGAACACTATTCC+TGG | - | chr4.3:10152316-10152335 | None:intergenic | 40.0% | |
| ACAATGCTTCAAGATCAACG+AGG | - | chr4.3:10154817-10154836 | None:intergenic | 40.0% | |
| ACTTTCGCGATGTAAATGGA+TGG | + | chr4.3:10152862-10152881 | MS.gene061784:CDS | 40.0% | |
| AGAAACATGAGAGAAACCGT+TGG | + | chr4.3:10153645-10153664 | MS.gene061784:CDS | 40.0% | |
| AGTAAGATATCATCCACCTG+AGG | - | chr4.3:10150655-10150674 | None:intergenic | 40.0% | |
| AGTCTTCAAATGCCCAACTT+GGG | - | chr4.3:10151939-10151958 | None:intergenic | 40.0% | |
| ATACCTTCACTTCCCGATAA+TGG | - | chr4.3:10149652-10149671 | None:intergenic | 40.0% | |
| ATCCCAATAAGCACTAGAAG+GGG | - | chr4.3:10151797-10151816 | None:intergenic | 40.0% | |
| ATGAAGAAGGAACTGTTCCA+AGG | - | chr4.3:10151530-10151549 | None:intergenic | 40.0% | |
| ATTCCCCTTCTAGTGCTTAT+TGG | + | chr4.3:10151791-10151810 | MS.gene061784:CDS | 40.0% | |
| ATTCTTTAAGCGCATCCACA+TGG | + | chr4.3:10151416-10151435 | MS.gene061784:CDS | 40.0% | |
| ATTTAAGCATACCTCGGGAA+AGG | + | chr4.3:10153349-10153368 | MS.gene061784:intron | 40.0% | |
| CAAACTTAGTGACGTAGCAA+TGG | + | chr4.3:10150432-10150451 | MS.gene061784:intron | 40.0% | |
| CAAAGTTATGCCTAACACAG+AGG | + | chr4.3:10149934-10149953 | MS.gene061784:CDS | 40.0% | |
| CACCAGGTTAGGAAAAACTA+TGG | + | chr4.3:10154146-10154165 | MS.gene061784:CDS | 40.0% | |
| CATCGTTCTAGTCCATTATC+GGG | + | chr4.3:10149637-10149656 | MS.gene061784:CDS | 40.0% | |
| CATTCAACAACCTGTGGTAT+TGG | - | chr4.3:10154412-10154431 | None:intergenic | 40.0% | |
| CCTGAATAGGCACTATCTTT+GGG | - | chr4.3:10151442-10151461 | None:intergenic | 40.0% | |
| CGATGGATGAGTAAAGAACT+AGG | + | chr4.3:10151745-10151764 | MS.gene061784:CDS | 40.0% | |
| CTAATCGAATCTAAATCCCG+AGG | - | chr4.3:10152540-10152559 | None:intergenic | 40.0% | |
| CTCAAGGATATGAGACAATG+GGG | + | chr4.3:10150851-10150870 | MS.gene061784:CDS | 40.0% | |
| GAAAAGATGGACATAACTGG+AGG | + | chr4.3:10148580-10148599 | MS.gene061784:CDS | 40.0% | |
| GAAACAGAACCCAATAACAC+GGG | + | chr4.3:10150814-10150833 | MS.gene061784:CDS | 40.0% | |
| GAAGCAAACTGAGAAAAGGT+TGG | + | chr4.3:10154334-10154353 | MS.gene061784:CDS | 40.0% | |
| GACTCACTACAAAGTGATGT+TGG | + | chr4.3:10151181-10151200 | MS.gene061784:intron | 40.0% | |
| GAGTGTCTTCTATTCCAACT+AGG | - | chr4.3:10151651-10151670 | None:intergenic | 40.0% | |
| GATAGGGGACAGTTAGAATA+AGG | - | chr4.3:10150264-10150283 | None:intergenic | 40.0% | |
| GATCCAAAGGCCAACATTAT+CGG | - | chr4.3:10150552-10150571 | None:intergenic | 40.0% | |
| GATGCATTTGTTCTTGCTTG+AGG | + | chr4.3:10149419-10149438 | MS.gene061784:intron | 40.0% | |
| GCCAGTGAATCTTTCATTGA+AGG | - | chr4.3:10153720-10153739 | None:intergenic | 40.0% | |
| GGAAGATAATTTGGTCGGTT+GGG | + | chr4.3:10154168-10154187 | MS.gene061784:CDS | 40.0% | |
| GGCATGCATTAAAGTTGCTT+TGG | - | chr4.3:10149873-10149892 | None:intergenic | 40.0% | |
| GGCCCAAATGTATTAGATGA+AGG | + | chr4.3:10152756-10152775 | MS.gene061784:CDS | 40.0% | |
| GTATCCCAATAAGCACTAGA+AGG | - | chr4.3:10151799-10151818 | None:intergenic | 40.0% | |
| GTGAACTTTCGCGATGTAAA+TGG | + | chr4.3:10152858-10152877 | MS.gene061784:CDS | 40.0% | |
| TAAGATCTTGCCTGATCCAA+AGG | - | chr4.3:10150565-10150584 | None:intergenic | 40.0% | |
| TATGGTTCAGCAGATGATTC+AGG | - | chr4.3:10154635-10154654 | None:intergenic | 40.0% | |
| TGAAGGAAATTGGCAGGTAT+GGG | + | chr4.3:10150936-10150955 | MS.gene061784:intron | 40.0% | |
| TGACCACTGTTAATGCTAGA+CGG | - | chr4.3:10149974-10149993 | None:intergenic | 40.0% | |
| TGGGCTATTTAAGCATACCT+CGG | + | chr4.3:10153343-10153362 | MS.gene061784:intron | 40.0% | |
| TGTCTCCATCTCACACATAT+TGG | + | chr4.3:10149338-10149357 | MS.gene061784:intron | 40.0% | |
| TTACCGTCTAGCATTAACAG+TGG | + | chr4.3:10149968-10149987 | MS.gene061784:CDS | 40.0% | |
| TTATTATAGGCTCACGTGAG+AGG | + | chr4.3:10154122-10154141 | MS.gene061784:intron | 40.0% | |
| TTCACACCAGCAACAATTGT+TGG | - | chr4.3:10152837-10152856 | None:intergenic | 40.0% | |
| TTCAGAACAAGTTTCGCAGT+TGG | + | chr4.3:10153943-10153962 | MS.gene061784:CDS | 40.0% | |
| TTCCCCTTCTAGTGCTTATT+GGG | + | chr4.3:10151792-10151811 | MS.gene061784:CDS | 40.0% | |
| TTCTACCAGAAGGATGTTGT+GGG | - | chr4.3:10153527-10153546 | None:intergenic | 40.0% | |
| TTGCTTCCCTCATATCTCTT+GGG | + | chr4.3:10153472-10153491 | MS.gene061784:CDS | 40.0% | |
| TTTATACCAGCTGAAGCTGA+AGG | + | chr4.3:10150919-10150938 | MS.gene061784:CDS | 40.0% | |
| TTTGCGTGGATTCAAATCAG+AGG | + | chr4.3:10154235-10154254 | MS.gene061784:CDS | 40.0% | |
| ! | AAATAATCGAAGGGGTGTGT+GGG | + | chr4.3:10153324-10153343 | MS.gene061784:intron | 40.0% |
| ! | AAGGCAGAAACTTTGAAGGA+GGG | - | chr4.3:10149309-10149328 | None:intergenic | 40.0% |
| ! | ATACTTGGAGGCATATACGA+AGG | - | chr4.3:10148411-10148430 | None:intergenic | 40.0% |
| ! | ATATTACGTTGGCGTCGAAA+AGG | + | chr4.3:10154206-10154225 | MS.gene061784:CDS | 40.0% |
| ! | CTTCATTTTGCAGCCTTTCT+TGG | + | chr4.3:10152792-10152811 | MS.gene061784:CDS | 40.0% |
| ! | GTGTTATTGGGTTCTGTTTC+AGG | - | chr4.3:10150814-10150833 | None:intergenic | 40.0% |
| ! | TAAATAATCGAAGGGGTGTG+TGG | + | chr4.3:10153323-10153342 | MS.gene061784:intron | 40.0% |
| ! | TCACGTTGGACTCTTTTCAT+GGG | - | chr4.3:10153387-10153406 | None:intergenic | 40.0% |
| ! | TCCCATAGTTTTTCCTAACC+TGG | - | chr4.3:10154151-10154170 | None:intergenic | 40.0% |
| ! | TGGACTCTTTTCATGGGAAA+TGG | - | chr4.3:10153381-10153400 | None:intergenic | 40.0% |
| ! | TTAAAGTTGCTTTGGTTCCC+TGG | - | chr4.3:10149865-10149884 | None:intergenic | 40.0% |
| !! | ATAATGTTGGCCTTTGGATC+AGG | + | chr4.3:10150552-10150571 | MS.gene061784:intron | 40.0% |
| !! | ATTCCGATAATGTTGGCCTT+TGG | + | chr4.3:10150546-10150565 | MS.gene061784:intron | 40.0% |
| !! | CAAATCAGAGGCTATTTCTG+AGG | + | chr4.3:10154247-10154266 | MS.gene061784:CDS | 40.0% |
| !! | CATTGACTTCACTCTAGCAA+GGG | - | chr4.3:10154366-10154385 | None:intergenic | 40.0% |
| !! | CGTTGATCTTGAAGCATTGT+TGG | + | chr4.3:10154817-10154836 | MS.gene061784:CDS | 40.0% |
| !! | TTGGATTGGTTGACAATAGG+TGG | + | chr4.3:10148516-10148535 | MS.gene061784:intron | 40.0% |
| !! | TTTTTGGTGGTTCCTATCTC+TGG | + | chr4.3:10149548-10149567 | MS.gene061784:intron | 40.0% |
| !!! | CTGATCAAGTTTTTTCCTCC+AGG | + | chr4.3:10149844-10149863 | MS.gene061784:intron | 40.0% |
| AACTGTCCCCTATCTCTCAA+AGG | + | chr4.3:10150270-10150289 | MS.gene061784:CDS | 45.0% | |
| AAGTGTATCTGTGGCAGAAG+AGG | + | chr4.3:10151696-10151715 | MS.gene061784:CDS | 45.0% | |
| AATGCGAAGTCACACAAGTC+TGG | + | chr4.3:10153882-10153901 | MS.gene061784:CDS | 45.0% | |
| AATTGCACTCATCTTCCGTG+AGG | + | chr4.3:10153219-10153238 | MS.gene061784:intron | 45.0% | |
| AATTTGGTCGGTTGGGATTG+TGG | + | chr4.3:10154175-10154194 | MS.gene061784:CDS | 45.0% | |
| ACAATATCGATGGCTACGTC+CGG | + | chr4.3:10148332-10148351 | MS.gene061784:CDS | 45.0% | |
| ACGAACTTACTGGATGCTTG+AGG | + | chr4.3:10148943-10148962 | MS.gene061784:CDS | 45.0% | |
| ACTCAAGAAGTCAACACTGC+CGG | + | chr4.3:10152438-10152457 | MS.gene061784:CDS | 45.0% | |
| AGCCTTTCTTGGCTACGATT+GGG | + | chr4.3:10152803-10152822 | MS.gene061784:CDS | 45.0% | |
| AGGCAAGGCAGAAACTTTGA+AGG | - | chr4.3:10149313-10149332 | None:intergenic | 45.0% | |
| AGGTGTATCATCTTCCACTG+AGG | + | chr4.3:10154283-10154302 | MS.gene061784:CDS | 45.0% | |
| AGTCCATTATCGGGAAGTGA+AGG | + | chr4.3:10149646-10149665 | MS.gene061784:CDS | 45.0% | |
| AGTGTATCTGTGGCAGAAGA+GGG | + | chr4.3:10151697-10151716 | MS.gene061784:CDS | 45.0% | |
| ATAGTTCTCCAAGTGCACCT+GGG | - | chr4.3:10151863-10151882 | None:intergenic | 45.0% | |
| ATGCAAGAGACCAATACCAC+AGG | + | chr4.3:10154399-10154418 | MS.gene061784:CDS | 45.0% | |
| CAATTTCCTTCAGCTTCAGC+TGG | - | chr4.3:10150928-10150947 | None:intergenic | 45.0% | |
| CAGCTGAAGCTGAAGGAAAT+TGG | + | chr4.3:10150926-10150945 | MS.gene061784:CDS | 45.0% | |
| CAGTACAACTATTCCTTCCC+AGG | + | chr4.3:10151843-10151862 | MS.gene061784:CDS | 45.0% | |
| CAGTTCTTTGCTTGGTAGGA+AGG | + | chr4.3:10152593-10152612 | MS.gene061784:CDS | 45.0% | |
| CCCAAAGATAGTGCCTATTC+AGG | + | chr4.3:10151439-10151458 | MS.gene061784:CDS | 45.0% | |
| CCTTGCTAGAGTGAAGTCAA+TGG | + | chr4.3:10154364-10154383 | MS.gene061784:CDS | 45.0% | |
| CTATTCCTGGTTATCTCTGC+CGG | - | chr4.3:10152303-10152322 | None:intergenic | 45.0% | |
| CTGAAGGAAATTGGCAGGTA+TGG | + | chr4.3:10150935-10150954 | MS.gene061784:intron | 45.0% | |
| CTGCAAAATGAAGCACACCT+TGG | - | chr4.3:10152785-10152804 | None:intergenic | 45.0% | |
| CTTAGTGACGTAGCAATGGA+TGG | + | chr4.3:10150436-10150455 | MS.gene061784:intron | 45.0% | |
| GAACAAGTTTCGCAGTTGGA+AGG | + | chr4.3:10153947-10153966 | MS.gene061784:CDS | 45.0% | |
| GAGTCTTCAAATGCCCAACT+TGG | - | chr4.3:10151940-10151959 | None:intergenic | 45.0% | |
| GCACTTGGAGAACTATGTAC+TGG | + | chr4.3:10151867-10151886 | MS.gene061784:CDS | 45.0% | |
| GCAGGAAGCAAACTGAGAAA+AGG | + | chr4.3:10154330-10154349 | MS.gene061784:CDS | 45.0% | |
| GCCTGAATAGGCACTATCTT+TGG | - | chr4.3:10151443-10151462 | None:intergenic | 45.0% | |
| GCTTCTGCAAATGGACACAA+AGG | + | chr4.3:10153561-10153580 | MS.gene061784:CDS | 45.0% | |
| GGGAAGATAATTTGGTCGGT+TGG | + | chr4.3:10154167-10154186 | MS.gene061784:CDS | 45.0% | |
| GGGATCGATAAAAGCCTAGT+TGG | + | chr4.3:10151634-10151653 | MS.gene061784:CDS | 45.0% | |
| GGGCTATTTAAGCATACCTC+GGG | + | chr4.3:10153344-10153363 | MS.gene061784:intron | 45.0% | |
| GTATTAGATGAAGGTGGCCA+AGG | + | chr4.3:10152765-10152784 | MS.gene061784:CDS | 45.0% | |
| GTCTTCAAATGCCCAACTTG+GGG | - | chr4.3:10151938-10151957 | None:intergenic | 45.0% | |
| GTTCAGCAGATGATTCAGGT+GGG | - | chr4.3:10154631-10154650 | None:intergenic | 45.0% | |
| GTTCTACCAGAAGGATGTTG+TGG | - | chr4.3:10153528-10153547 | None:intergenic | 45.0% | |
| GTTGCTTCCCTCATATCTCT+TGG | + | chr4.3:10153471-10153490 | MS.gene061784:CDS | 45.0% | |
| TATACACCTCAACACAAGGC+TGG | + | chr4.3:10152336-10152355 | MS.gene061784:CDS | 45.0% | |
| TCCATTTGCAGAAGCTAGGT+CGG | - | chr4.3:10153556-10153575 | None:intergenic | 45.0% | |
| TCTGAGGGAACTATGGTACA+AGG | + | chr4.3:10154263-10154282 | MS.gene061784:CDS | 45.0% | |
| TGAAACTGTCGAGCTTCTTC+AGG | - | chr4.3:10151723-10151742 | None:intergenic | 45.0% | |
| TGAAGCTGAAGGAAATTGGC+AGG | + | chr4.3:10150930-10150949 | MS.gene061784:CDS | 45.0% | |
| TGCTTCCCTCATATCTCTTG+GGG | + | chr4.3:10153473-10153492 | MS.gene061784:CDS | 45.0% | |
| TGGTAGGAAGGACGATGAAT+GGG | + | chr4.3:10152605-10152624 | MS.gene061784:CDS | 45.0% | |
| TGTGTCCATTTGCAGAAGCT+AGG | - | chr4.3:10153560-10153579 | None:intergenic | 45.0% | |
| TTGGTAGGAAGGACGATGAA+TGG | + | chr4.3:10152604-10152623 | MS.gene061784:CDS | 45.0% | |
| ! | AAAGACTGGCTAAGCTTTGC+TGG | - | chr4.3:10154723-10154742 | None:intergenic | 45.0% |
| ! | ATTGCTGCTTCTGATCTCAC+CGG | - | chr4.3:10152460-10152479 | None:intergenic | 45.0% |
| ! | CAAGGCAGAAACTTTGAAGG+AGG | - | chr4.3:10149310-10149329 | None:intergenic | 45.0% |
| ! | CTCACGTTGGACTCTTTTCA+TGG | - | chr4.3:10153388-10153407 | None:intergenic | 45.0% |
| !! | ATGGATGGACTGCTCTTCAT+TGG | + | chr4.3:10152877-10152896 | MS.gene061784:CDS | 45.0% |
| !! | ATGTTTTCAGGCTGGAAGTG+TGG | + | chr4.3:10148868-10148887 | MS.gene061784:intron | 45.0% |
| !! | CCATTGACTTCACTCTAGCA+AGG | - | chr4.3:10154367-10154386 | None:intergenic | 45.0% |
| !! | GGCTATTTCTGAGGGAACTA+TGG | + | chr4.3:10154256-10154275 | MS.gene061784:CDS | 45.0% |
| !! | TGGATGGACTGCTCTTCATT+GGG | + | chr4.3:10152878-10152897 | MS.gene061784:CDS | 45.0% |
| !! | TGGTATTGGTCTCTTGCATC+TGG | - | chr4.3:10154398-10154417 | None:intergenic | 45.0% |
| AAACCAGAGGCCTGTTCACA+AGG | - | chr4.3:10151394-10151413 | None:intergenic | 50.0% | |
| AAGGTTGCCTGTCATTCCTC+AGG | + | chr4.3:10150636-10150655 | MS.gene061784:CDS | 50.0% | |
| AGCTCGACAGTTTCAACCGA+TGG | + | chr4.3:10151728-10151747 | MS.gene061784:CDS | 50.0% | |
| CAGCCTTTCTTGGCTACGAT+TGG | + | chr4.3:10152802-10152821 | MS.gene061784:CDS | 50.0% | |
| CATAGTTCTCCAAGTGCACC+TGG | - | chr4.3:10151864-10151883 | None:intergenic | 50.0% | |
| CATGGATCAGTAAGTGCTCC+TGG | - | chr4.3:10153504-10153523 | None:intergenic | 50.0% | |
| CGTGTTGCAGCAACATGAAC+AGG | - | chr4.3:10153921-10153940 | None:intergenic | 50.0% | |
| CTATTCAGGCTCATCGTGTG+AGG | + | chr4.3:10151453-10151472 | MS.gene061784:CDS | 50.0% | |
| CTCACACGATGAGCCTGAAT+AGG | - | chr4.3:10151455-10151474 | None:intergenic | 50.0% | |
| GAAGTCTCTGCCTCTGTGTT+AGG | - | chr4.3:10149947-10149966 | None:intergenic | 50.0% | |
| GGAAGCTCATGAGAGACTCA+AGG | + | chr4.3:10148629-10148648 | MS.gene061784:CDS | 50.0% | |
| GGTTCAGCAGATGATTCAGG+TGG | - | chr4.3:10154632-10154651 | None:intergenic | 50.0% | |
| GTCGGTTGGGATTGTGGAAA+AGG | + | chr4.3:10154181-10154200 | MS.gene061784:CDS | 50.0% | |
| TATTCCTTCCCAGGTGCACT+TGG | + | chr4.3:10151852-10151871 | MS.gene061784:CDS | 50.0% | |
| TCATCCACCTGAGGAATGAC+AGG | - | chr4.3:10150646-10150665 | None:intergenic | 50.0% | |
| TGCTGCCCCAAGAGATATGA+GGG | - | chr4.3:10153481-10153500 | None:intergenic | 50.0% | |
| TGTGAGATGGAGACAAAGCG+AGG | - | chr4.3:10149333-10149352 | None:intergenic | 50.0% | |
| TTTCCTTGTGAACAGGCCTC+TGG | + | chr4.3:10151388-10151407 | MS.gene061784:intron | 50.0% | |
| ! | AAGTTGCTTTGGTTCCCTGG+AGG | - | chr4.3:10149862-10149881 | None:intergenic | 50.0% |
| ! | ATGGACTGCTCTTCATTGGG+CGG | + | chr4.3:10152881-10152900 | MS.gene061784:CDS | 50.0% |
| ! | CGAAAAGGTAGTGGTTTGCG+TGG | + | chr4.3:10154221-10154240 | MS.gene061784:CDS | 50.0% |
| ACCTCAACACAAGGCTGGAC+GGG | + | chr4.3:10152341-10152360 | MS.gene061784:CDS | 55.0% | |
| ACGTGAGAGGTCACCAGGTT+AGG | + | chr4.3:10154135-10154154 | MS.gene061784:CDS | 55.0% | |
| ATATCTCTTGGGGCAGCACC+AGG | + | chr4.3:10153483-10153502 | MS.gene061784:CDS | 55.0% | |
| CACCTCAACACAAGGCTGGA+CGG | + | chr4.3:10152340-10152359 | MS.gene061784:CDS | 55.0% | |
| CCAGAAGGATGTTGTGGGCA+TGG | - | chr4.3:10153522-10153541 | None:intergenic | 55.0% | |
| CCATGCCCACAACATCCTTC+TGG | + | chr4.3:10153519-10153538 | MS.gene061784:CDS | 55.0% | |
| CCGAGGGAAGTCATGCTCTT+GGG | - | chr4.3:10152523-10152542 | None:intergenic | 55.0% | |
| GATGGAGACAAAGCGAGGCA+AGG | - | chr4.3:10149328-10149347 | None:intergenic | 55.0% | |
| GCCGACCTAGCTTCTGCAAA+TGG | + | chr4.3:10153552-10153571 | MS.gene061784:CDS | 55.0% | |
| GGCACTATCTTTGGGCCATG+TGG | - | chr4.3:10151434-10151453 | None:intergenic | 55.0% | |
| GGCCCAATCGTAGCCAAGAA+AGG | - | chr4.3:10152808-10152827 | None:intergenic | 55.0% | |
| GTGCTGCCCCAAGAGATATG+AGG | - | chr4.3:10153482-10153501 | None:intergenic | 55.0% | |
| GTTGCCTGTCATTCCTCAGG+TGG | + | chr4.3:10150639-10150658 | MS.gene061784:CDS | 55.0% | |
| TCGGCTGGTGTTCTACCAGA+AGG | - | chr4.3:10153537-10153556 | None:intergenic | 55.0% | |
| TTCTCCAAGTGCACCTGGGA+AGG | - | chr4.3:10151859-10151878 | None:intergenic | 55.0% | |
| TTGCACTGCTACTACGCCCA+TGG | + | chr4.3:10148896-10148915 | MS.gene061784:CDS | 55.0% | |
| TTTGCAGAAGCTAGGTCGGC+TGG | - | chr4.3:10153552-10153571 | None:intergenic | 55.0% | |
| ! | CCAAGAGCATGACTTCCCTC+GGG | + | chr4.3:10152521-10152540 | MS.gene061784:CDS | 55.0% |
| ! | CCCAAGAGCATGACTTCCCT+CGG | + | chr4.3:10152520-10152539 | MS.gene061784:CDS | 55.0% |
| ! | CGTTGGCGTCGAAAAGGTAG+TGG | + | chr4.3:10154212-10154231 | MS.gene061784:CDS | 55.0% |
| ! | CTTCATTGGGCGGCGTTTTG+TGG | + | chr4.3:10152891-10152910 | MS.gene061784:CDS | 55.0% |
| ! | GTTCGGCGAGATAGAAGTGC+CGG | + | chr4.3:10152281-10152300 | MS.gene061784:CDS | 55.0% |
| !! | AAGTGCCGGCAGAGATAACC+AGG | + | chr4.3:10152295-10152314 | MS.gene061784:CDS | 55.0% |
| AATGGCTCTCGCCTTTCCCG+AGG | - | chr4.3:10153363-10153382 | None:intergenic | 60.0% | |
| CCCGAGGGAAGTCATGCTCT+TGG | - | chr4.3:10152524-10152543 | None:intergenic | 60.0% | |
| ! | ACCCGTCCAGCCTTGTGTTG+AGG | - | chr4.3:10152345-10152364 | None:intergenic | 60.0% |
| ! | ATTGGGCGGCGTTTTGTGGC+AGG | + | chr4.3:10152895-10152914 | MS.gene061784:CDS | 60.0% |
| GGCTCACGTGAGAGGTCACC+AGG | + | chr4.3:10154130-10154149 | MS.gene061784:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10148273 | 10154871 | 10148273 | ID=MS.gene061784 |
| chr4.3 | mRNA | 10148273 | 10154871 | 10148273 | ID=MS.gene061784.t1;Parent=MS.gene061784 |
| chr4.3 | exon | 10148273 | 10148426 | 10148273 | ID=MS.gene061784.t1.exon1;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10148273 | 10148426 | 10148273 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10148535 | 10148650 | 10148535 | ID=MS.gene061784.t1.exon2;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10148535 | 10148650 | 10148535 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10148878 | 10148966 | 10148878 | ID=MS.gene061784.t1.exon3;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10148878 | 10148966 | 10148878 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10149625 | 10149667 | 10149625 | ID=MS.gene061784.t1.exon4;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10149625 | 10149667 | 10149625 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10149866 | 10150022 | 10149866 | ID=MS.gene061784.t1.exon5;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10149866 | 10150022 | 10149866 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10150178 | 10150291 | 10150178 | ID=MS.gene061784.t1.exon6;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10150178 | 10150291 | 10150178 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10150626 | 10150951 | 10150626 | ID=MS.gene061784.t1.exon7;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10150626 | 10150951 | 10150626 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10151403 | 10151969 | 10151403 | ID=MS.gene061784.t1.exon8;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10151403 | 10151969 | 10151403 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10152216 | 10152916 | 10152216 | ID=MS.gene061784.t1.exon9;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10152216 | 10152916 | 10152216 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10153461 | 10154016 | 10153461 | ID=MS.gene061784.t1.exon10;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10153461 | 10154016 | 10153461 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10154131 | 10154457 | 10154131 | ID=MS.gene061784.t1.exon11;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10154131 | 10154457 | 10154131 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| chr4.3 | exon | 10154761 | 10154871 | 10154761 | ID=MS.gene061784.t1.exon12;Parent=MS.gene061784.t1 |
| chr4.3 | CDS | 10154761 | 10154871 | 10154761 | ID=cds.MS.gene061784.t1;Parent=MS.gene061784.t1 |
| Gene Sequence |
| Protein sequence |
