AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062586

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062586.t1 MTR_2g078350 81.690 497 88 2 136 631 1 495 0.0 809
MS.gene062586.t1 MTR_2g078340 95.479 376 16 1 266 641 2 376 0.0 732
MS.gene062586.t1 MTR_2g078240 39.628 323 177 7 400 705 115 436 1.15e-67 229
MS.gene062586.t1 MTR_2g078240 32.432 185 123 2 203 386 55 238 1.74e-31 128
MS.gene062586.t1 MTR_2g078250 35.878 131 61 2 10 137 21 131 1.34e-21 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062586.t1 AT1G53210 35.990 414 244 7 29 441 31 424 3.09e-81 270
MS.gene062586.t1 AT1G53210 38.838 327 176 4 400 705 255 578 1.60e-61 216
MS.gene062586.t1 AT1G29020 33.115 305 182 8 409 703 256 548 8.20e-43 164
MS.gene062586.t1 AT1G29020 26.098 387 241 10 22 395 20 374 2.37e-34 139
MS.gene062586.t1 AT1G29020 33.115 305 182 8 409 703 289 581 1.25e-42 164
MS.gene062586.t1 AT1G29020 25.061 407 253 10 22 395 20 407 9.37e-34 137
MS.gene062586.t1 AT1G29025 32.903 310 183 7 410 704 271 570 1.20e-36 145
MS.gene062586.t1 AT1G29025 28.165 387 240 10 22 388 19 387 4.50e-36 144
MS.gene062586.t1 AT2G34020 28.701 331 213 6 396 704 273 602 8.41e-36 144
MS.gene062586.t1 AT2G34020 25.700 393 255 10 29 403 46 419 1.99e-33 136
MS.gene062586.t1 AT2G34030 29.560 318 207 7 404 710 253 564 4.90e-32 132
MS.gene062586.t1 AT2G34030 24.515 412 275 11 10 407 8 397 1.47e-27 118
MS.gene062586.t1 AT2G34020 29.520 271 172 4 453 704 365 635 2.60e-31 130
MS.gene062586.t1 AT2G34020 24.706 425 252 13 29 403 46 452 2.00e-28 121

Find 126 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTCATTTATTTCTGATTT+TGG 0.111752 2.1:-22152547 MS.gene062586:CDS
TTTGAGTCAATGCAGATTTA+TGG 0.122278 2.1:-22146712 MS.gene062586:intron
TCCATTGGAAATCAATTTAT+TGG 0.127818 2.1:+22152713 None:intergenic
CCTAATGTAGCTGCCATAAA+TGG 0.132670 2.1:-22150028 MS.gene062586:CDS
CCTGAATCCTTAATTCTTCT+TGG 0.168153 2.1:-22152405 MS.gene062586:intron
CTGAAGGGACATCTTATTTC+TGG 0.190917 2.1:-22148572 MS.gene062586:CDS
AAATCTGACTCACCCATTTA+TGG 0.207244 2.1:+22150015 None:intergenic
CCATGTTCTAACAACATTCT+TGG 0.212638 2.1:-22152567 MS.gene062586:CDS
ATTCCATGGAGAATCATATT+TGG 0.230860 2.1:-22152508 MS.gene062586:CDS
CCCCATGTTGACTGAATTCA+TGG 0.236145 2.1:+22149194 None:intergenic
ACTAATTTCATTGTCTTTGT+TGG 0.251278 2.1:+22148229 None:intergenic
GCCACTAACAAATTCTTCTT+TGG 0.253466 2.1:+22149042 None:intergenic
GAACAAATCTTCAAGATTCT+TGG 0.301871 2.1:-22152474 MS.gene062586:CDS
AGCAATACCAAGAAGAATTA+AGG 0.303063 2.1:+22152398 None:intergenic
CCATTTATGGCAGCTACATT+AGG 0.318327 2.1:+22150028 None:intergenic
GTATCTAATATCATTGGTTA+TGG 0.321573 2.1:-22146506 MS.gene062586:CDS
GATAGGTTATGGCATTACTA+TGG 0.332693 2.1:-22150744 MS.gene062586:intron
CCAAGAAGAATTAAGGATTC+AGG 0.344838 2.1:+22152405 None:intergenic
AGAATTTGAGTTTATCCATT+TGG 0.348639 2.1:+22148181 None:intergenic
CCATTGGAAATCAATTTATT+GGG 0.359879 2.1:+22152714 None:intergenic
ATCTATGAACAAAATGTATC+AGG 0.369645 2.1:-22148960 MS.gene062586:intron
GTGTTTATGAACAACATTCT+TGG 0.370916 2.1:-22146685 MS.gene062586:CDS
ACCAAAGAAGAATTTGTTAG+TGG 0.372618 2.1:-22149043 MS.gene062586:CDS
AAGTCATGCTCAAAATGATA+TGG 0.374538 2.1:-22148543 MS.gene062586:CDS
AGTGAGAATGAATTTGTTGA+TGG 0.378891 2.1:-22148209 MS.gene062586:CDS
TATCCAAAGCATGCTTTGTC+TGG 0.380009 2.1:+22149002 None:intergenic
TAACCATGCAGTCACCCCTT+TGG 0.396965 2.1:+22147695 None:intergenic
ATTAGATACAAGAGGTATGT+TGG 0.398858 2.1:+22146520 None:intergenic
TCTTCCATTTGATGAATATG+AGG 0.402559 2.1:+22151238 None:intergenic
CCTCTTGTATCTAATATCAT+TGG 0.406295 2.1:-22146512 MS.gene062586:CDS
GGCAATTGTTTGTATTGTGA+TGG 0.409059 2.1:-22146590 MS.gene062586:CDS
AGGTTATTCGAGCAAGTTGA+TGG 0.409987 2.1:-22148368 MS.gene062586:CDS
GAGTATTGTAAGCAAATGTA+TGG 0.415952 2.1:-22152597 MS.gene062586:CDS
TAACCAGACAAAGCATGCTT+TGG 0.418050 2.1:-22149005 MS.gene062586:CDS
GAAGTAAAAGAGTTGTTGCT+TGG 0.423281 2.1:-22149151 MS.gene062586:CDS
ACTGGAGTTGGATTGTTAGC+TGG 0.429890 2.1:-22151350 MS.gene062586:CDS
TTGTTGATGGCTTCACCAAA+TGG 0.432286 2.1:-22148196 MS.gene062586:CDS
GAACAACATTCTTGGCTTTG+TGG 0.441869 2.1:-22146677 MS.gene062586:CDS
CCCAATAAATTGATTTCCAA+TGG 0.444689 2.1:-22152714 MS.gene062586:CDS
GATACCTCATATTCATCAAA+TGG 0.449371 2.1:-22151242 MS.gene062586:CDS
CACTGGACTTTCAAGTGATA+AGG 0.450927 2.1:-22151396 MS.gene062586:CDS
TATGAGTACTTGTTATTCCA+TGG 0.456039 2.1:-22152522 MS.gene062586:CDS
TTTCTCACGTGTTCAATCCA+TGG 0.456370 2.1:+22148605 None:intergenic
TCAATTTATTGGGAAGAAAA+CGG 0.458579 2.1:+22152724 None:intergenic
TGGAAGAGAATCAAACCAAA+GGG 0.459663 2.1:-22147710 MS.gene062586:CDS
CCTGCTTCTCACAGTTGTGT+GGG 0.461639 2.1:-22151318 MS.gene062586:CDS
AGCTATAGCATATGTGATGT+TGG 0.463435 2.1:-22147670 MS.gene062586:CDS
GTCCTCTCTGATATTTGTGT+CGG 0.465420 2.1:+22149117 None:intergenic
AGCTCAAAATCTTCTTCTCA+TGG 0.466725 2.1:-22148146 MS.gene062586:CDS
CATCTCATACTTCATTTACC+AGG 0.467416 2.1:-22150576 MS.gene062586:intron
CTAATGTAGCTGCCATAAAT+GGG 0.468804 2.1:-22150027 MS.gene062586:intron
TTAACAATGATAATGACAAA+GGG 0.469135 2.1:-22152650 MS.gene062586:CDS
GTAGTGAGGGAGACTCATTT+TGG 0.469435 2.1:-22148305 MS.gene062586:CDS
ATTTGCTTACAATACTCCTC+TGG 0.470597 2.1:+22152603 None:intergenic
AACTCAAATTCTAGTAAAGC+AGG 0.473066 2.1:-22148170 MS.gene062586:CDS
TACTATGTTGTCACTTCTTG+CGG 0.473315 2.1:-22147643 MS.gene062586:CDS
AGAATAAAACAAGCTTTGAC+TGG 0.476703 2.1:-22151218 MS.gene062586:intron
AAGTAAAAGAGTTGTTGCTT+GGG 0.476825 2.1:-22149150 MS.gene062586:CDS
CTCTAAAATTTGTAGCCAAA+GGG 0.478062 2.1:+22147544 None:intergenic
GCAATTGTTTGTATTGTGAT+GGG 0.481583 2.1:-22146589 MS.gene062586:CDS
ATCTTCAAGATTCTTGGTCC+AGG 0.484678 2.1:-22152468 MS.gene062586:CDS
GGAGAATCATATTTGGCTGC+TGG 0.485636 2.1:-22152501 MS.gene062586:CDS
GCTATAGCATATGTGATGTT+GGG 0.487166 2.1:-22147669 MS.gene062586:CDS
TCTCTAAAATTTGTAGCCAA+AGG 0.487209 2.1:+22147543 None:intergenic
TTAGATACAAGAGGTATGTT+GGG 0.494840 2.1:+22146521 None:intergenic
TCCTGCTTCTCACAGTTGTG+TGG 0.499987 2.1:-22151319 MS.gene062586:CDS
TAGAAAGATGGCAAGAATCA+TGG 0.500404 2.1:-22150711 MS.gene062586:CDS
CCCACACAACTGTGAGAAGC+AGG 0.506345 2.1:+22151318 None:intergenic
GAGTATGCTTCCACTGGAGT+TGG 0.510075 2.1:-22151362 MS.gene062586:CDS
CCTCACTACTTTCTCTAACT+CGG 0.512226 2.1:+22148319 None:intergenic
CTGATAAAGATGCTATCAAA+AGG 0.515493 2.1:-22148490 MS.gene062586:intron
CTGCTTCTCACAGTTGTGTG+GGG 0.517244 2.1:-22151317 MS.gene062586:CDS
GAGTAGGAATCTGCATTATG+AGG 0.520550 2.1:+22150669 None:intergenic
TTGAACATCATCAACTCCAT+TGG 0.520575 2.1:+22152698 None:intergenic
GAGAAAAGAACGTGAACTGA+AGG 0.526065 2.1:-22148588 MS.gene062586:CDS
GGAAGATGTTGAGAAGGTAA+TGG 0.527786 2.1:-22147730 MS.gene062586:CDS
CAAAAGATCCTAGCTGAGGA+TGG 0.534878 2.1:-22150055 MS.gene062586:CDS
TTCAGCGGATGTACTGGTGG+TGG 0.537087 2.1:-22146611 MS.gene062586:CDS
GCGCAAGAGTATGCTTCCAC+TGG 0.540034 2.1:-22151368 MS.gene062586:CDS
TACTTCTCACACAATGTATG+AGG 0.540505 2.1:-22147475 MS.gene062586:intron
GGATGTCCACAGAGGAAAAG+TGG 0.542719 2.1:+22146546 None:intergenic
GTAGAGAAAGAGAACAGAGT+AGG 0.543401 2.1:+22150653 None:intergenic
AAACCAAAGGGGTGACTGCA+TGG 0.544322 2.1:-22147698 MS.gene062586:CDS
TACCATGAATTCAGTCAACA+TGG 0.550517 2.1:-22149196 MS.gene062586:CDS
TTCGAGCAAGTTGATGGCGA+TGG 0.551497 2.1:-22148362 MS.gene062586:CDS
CGAGTTAGAGAAAGTAGTGA+GGG 0.552437 2.1:-22148318 MS.gene062586:CDS
CTTAACAATGATAATGACAA+AGG 0.552648 2.1:-22152651 MS.gene062586:CDS
ATACAAGAGGTATGTTGGGA+AGG 0.556594 2.1:+22146525 None:intergenic
TATATATGAGAGATATCACT+TGG 0.563447 2.1:-22146639 MS.gene062586:CDS
CCAAGAATGTTGTTAGAACA+TGG 0.564444 2.1:+22152567 None:intergenic
GGATATAGACACTAGAAAGA+TGG 0.566650 2.1:-22150723 MS.gene062586:CDS
CTAACTCGGATCTTGAAACA+TGG 0.570677 2.1:+22148333 None:intergenic
TAGGAGTTCCATCCTCAGCT+AGG 0.570837 2.1:+22150047 None:intergenic
CAGCCAAATATGATTCTCCA+TGG 0.571361 2.1:+22152505 None:intergenic
CATGCTCAAAATGATATGGT+TGG 0.579422 2.1:-22148539 MS.gene062586:CDS
AATGATGAGAGAAACTATCA+AGG 0.581313 2.1:+22150613 None:intergenic
TGCTTCTCACAGTTGTGTGG+GGG 0.582840 2.1:-22151316 MS.gene062586:CDS
CCGAGTTAGAGAAAGTAGTG+AGG 0.583038 2.1:-22148319 MS.gene062586:CDS
AGTATTGTAAGCAAATGTAT+GGG 0.584033 2.1:-22152596 MS.gene062586:CDS
GGTAGGATGCTCAATGATGA+TGG 0.588759 2.1:-22148518 MS.gene062586:CDS
TGAATCTTCTTCTAATCCAG+AGG 0.591703 2.1:-22152619 MS.gene062586:CDS
GAAGAATTAAGGATTCAGGA+AGG 0.595239 2.1:+22152409 None:intergenic
GACATGGGAAGATGTTGAGA+AGG 0.598738 2.1:-22147736 MS.gene062586:CDS
GGAATCTGCATTATGAGGAG+TGG 0.600129 2.1:+22150674 None:intergenic
ACCATGAATTCAGTCAACAT+GGG 0.600741 2.1:-22149195 MS.gene062586:CDS
AAGAATTAAGGATTCAGGAA+GGG 0.601558 2.1:+22152410 None:intergenic
TGGTAAGGCTGTAGATGCAG+AGG 0.605117 2.1:-22148285 MS.gene062586:CDS
TGTTGGCATCAAGATCATGA+AGG 0.608130 2.1:+22148246 None:intergenic
ATGGAAGAGAATCAAACCAA+AGG 0.619841 2.1:-22147711 MS.gene062586:CDS
CTCAAAATGATATGGTTGGT+AGG 0.623371 2.1:-22148535 MS.gene062586:CDS
CACAACTGTGAGAAGCAGGA+TGG 0.623998 2.1:+22151322 None:intergenic
CCATGAATTCAGTCAACATG+GGG 0.624062 2.1:-22149194 MS.gene062586:CDS
AGAAAAGAACGTGAACTGAA+GGG 0.629208 2.1:-22148587 MS.gene062586:CDS
AGCTAACAATCCAACTCCAG+TGG 0.632470 2.1:+22151352 None:intergenic
TGTTCATAGATTCTTTAGGG+AGG 0.638172 2.1:+22148972 None:intergenic
TTGCTTGCCAACAATAACAC+AGG 0.646292 2.1:+22151292 None:intergenic
TAACAATGATAATGACAAAG+GGG 0.649728 2.1:-22152649 MS.gene062586:CDS
TCTACAAAAGATCCTAGCTG+AGG 0.670159 2.1:-22150059 MS.gene062586:CDS
GAATCATATTTGGCTGCTGG+AGG 0.671094 2.1:-22152498 MS.gene062586:CDS
AAAAGTGGAACGAAAACTAG+TGG 0.676799 2.1:+22146561 None:intergenic
CCAATGATATTAGATACAAG+AGG 0.680585 2.1:+22146512 None:intergenic
GGAAGAGAATCAAACCAAAG+GGG 0.710553 2.1:-22147709 MS.gene062586:CDS
ATATATGAGAGATATCACTT+GGG 0.731670 2.1:-22146638 MS.gene062586:CDS
AGCCGACACAAATATCAGAG+AGG 0.740662 2.1:-22149119 MS.gene062586:CDS
CATGAATTCAGTCAACATGG+GGG 0.753325 2.1:-22149193 MS.gene062586:CDS
GTTGGGAAGGATGTCCACAG+AGG 0.762076 2.1:+22146538 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTATAATTTAAAAAA+GGG + chr2.1:22151218-22151237 None:intergenic 0.0%
!!! TATATTTTATAATTTAAAAA+AGG + chr2.1:22151219-22151238 None:intergenic 0.0%
!! AATTGAGTAATTAATTTATA+TGG + chr2.1:22149014-22149033 None:intergenic 10.0%
!! TCAAATAAAAAAAACTATAA+AGG + chr2.1:22148456-22148475 None:intergenic 10.0%
!!! AAACTAAAATTGTTTTTAAT+TGG - chr2.1:22152300-22152319 MS.gene062586:intron 10.0%
!!! AATAACAATTTTTTTACAAA+TGG - chr2.1:22151486-22151505 MS.gene062586:intron 10.0%
!!! TCTCAAAATTTTAAAATTTA+GGG - chr2.1:22151376-22151395 MS.gene062586:CDS 10.0%
!!! TTCTCAAAATTTTAAAATTT+AGG - chr2.1:22151375-22151394 MS.gene062586:CDS 10.0%
!! AAAAAATTTATGATAGGTTA+TGG - chr2.1:22148511-22148530 MS.gene062586:CDS 15.0%
!! AAAACATTTATATATACTGT+CGG + chr2.1:22150832-22150851 None:intergenic 15.0%
!! AAATTACTATATTGTATAGT+TGG + chr2.1:22148969-22148988 None:intergenic 15.0%
!! AACTATACAATATAGTAATT+TGG - chr2.1:22148968-22148987 MS.gene062586:CDS 15.0%
!! ATCCATTATAAAAATATAAC+CGG - chr2.1:22147198-22147217 MS.gene062586:intron 15.0%
!! TATTAATTAAATGACACTAA+TGG - chr2.1:22149790-22149809 MS.gene062586:intron 15.0%
!! TTATAAACCGAATTTAAAAA+TGG - chr2.1:22147230-22147249 MS.gene062586:intron 15.0%
!! TTTATAATTTAAAAAAGGGA+AGG + chr2.1:22151214-22151233 None:intergenic 15.0%
!! TTTCATAAATTTCACAAATT+GGG + chr2.1:22151245-22151264 None:intergenic 15.0%
!!! AAAATTGCCATTTTTTTAAT+AGG - chr2.1:22149710-22149729 MS.gene062586:intron 15.0%
!!! AAATTGCCATTTTTTTAATA+GGG - chr2.1:22149711-22149730 MS.gene062586:intron 15.0%
!!! AGAAAAACCATTTTTAAATT+CGG + chr2.1:22147240-22147259 None:intergenic 15.0%
!!! ATTTTTTTACAAATGGTATA+TGG - chr2.1:22151493-22151512 MS.gene062586:intron 15.0%
!!! TAAAAAAATCTATTCTAGTT+TGG + chr2.1:22147570-22147589 None:intergenic 15.0%
!!! TATTAAAAAAATGGCAATTT+TGG + chr2.1:22149711-22149730 None:intergenic 15.0%
!!! TTCTTTGATTTAATATTTGA+TGG + chr2.1:22147615-22147634 None:intergenic 15.0%
!!! TTTGTAAACCTTAATATTTT+AGG - chr2.1:22148820-22148839 MS.gene062586:intron 15.0%
!!! TTTTCATAAATTTCACAAAT+TGG + chr2.1:22151246-22151265 None:intergenic 15.0%
!! AAAAAACTATAAAGGAGTTA+AGG + chr2.1:22148448-22148467 None:intergenic 20.0%
!! AAAAATTCACATTGAATTTC+AGG - chr2.1:22151265-22151284 MS.gene062586:CDS 20.0%
!! AAATCTCATATATATTGTAG+TGG + chr2.1:22151839-22151858 None:intergenic 20.0%
!! AAATGAAGAGAAAAAAAAGA+AGG + chr2.1:22147414-22147433 None:intergenic 20.0%
!! AACTTGGTTGTATATTATAA+TGG + chr2.1:22148785-22148804 None:intergenic 20.0%
!! AAGTTTCAAATTCTTCAATT+AGG - chr2.1:22148418-22148437 MS.gene062586:intron 20.0%
!! AATAATCTGAAAACAACATA+TGG + chr2.1:22149394-22149413 None:intergenic 20.0%
!! AATATTTCTCAACTGATTAA+AGG - chr2.1:22149279-22149298 MS.gene062586:intron 20.0%
!! AGATTAACTTAAATGCAAAT+AGG + chr2.1:22148733-22148752 None:intergenic 20.0%
!! AGTTATTGAATAAAGGAATA+AGG + chr2.1:22151163-22151182 None:intergenic 20.0%
!! ATATACAACCAAGTTTAAAA+TGG - chr2.1:22148790-22148809 MS.gene062586:intron 20.0%
!! GATGAAATTATAAACAATCA+AGG + chr2.1:22152328-22152347 None:intergenic 20.0%
!! GTTATTGAATAAAGGAATAA+GGG + chr2.1:22151162-22151181 None:intergenic 20.0%
!! TAAACTGAAAAATCGTAATT+AGG + chr2.1:22152453-22152472 None:intergenic 20.0%
!! TAAATCCTCAAATAATTTGA+AGG - chr2.1:22152485-22152504 MS.gene062586:CDS 20.0%
!! TAAATGAGTCAAAAATTAAG+TGG - chr2.1:22151342-22151361 MS.gene062586:CDS 20.0%
!! TAATAGTTATCACTTCTTTA+AGG - chr2.1:22149445-22149464 MS.gene062586:intron 20.0%
!! TATTCCTTTATTCAATAACT+TGG - chr2.1:22151163-22151182 MS.gene062586:intron 20.0%
!! TGAAAAGAAAATATAGTTCA+AGG - chr2.1:22152426-22152445 MS.gene062586:CDS 20.0%
!! TGTAATTAGATTAGAGTTTA+AGG + chr2.1:22152381-22152400 None:intergenic 20.0%
!! TTCATAAATTTCACAAATTG+GGG + chr2.1:22151244-22151263 None:intergenic 20.0%
!! TTGAATTACCACTAAAATAA+AGG - chr2.1:22147507-22147526 MS.gene062586:CDS 20.0%
!!! AACCGGTTATATTTTTATAA+TGG + chr2.1:22147203-22147222 None:intergenic 20.0%
!!! AAGAATACCTCTTTTTTTTA+AGG - chr2.1:22147630-22147649 MS.gene062586:CDS 20.0%
!!! AAGTATTACTACTTTTTTTG+TGG + chr2.1:22151776-22151795 None:intergenic 20.0%
!!! AATGGATTTTTTTATAAACC+TGG + chr2.1:22147185-22147204 None:intergenic 20.0%
!!! AATTGCCATTTTTTTAATAG+GGG - chr2.1:22149712-22149731 MS.gene062586:intron 20.0%
!!! ACAATATAGTAATTTGGAAT+TGG - chr2.1:22148974-22148993 MS.gene062586:CDS 20.0%
!!! AGAATACCTCTTTTTTTTAA+GGG - chr2.1:22147631-22147650 MS.gene062586:CDS 20.0%
!!! ATTGCAACATTTTAAAACTT+AGG + chr2.1:22149507-22149526 None:intergenic 20.0%
!!! ATTTTGTTCATAGATTCTTT+AGG + chr2.1:22150301-22150320 None:intergenic 20.0%
!!! CAATATAGTAATTTGGAATT+GGG - chr2.1:22148975-22148994 MS.gene062586:CDS 20.0%
!!! CATACACATTTTTTTTTTAG+AGG - chr2.1:22147729-22147748 MS.gene062586:CDS 20.0%
!!! GTGTCATTTAATTAATAACA+AGG + chr2.1:22149787-22149806 None:intergenic 20.0%
!!! GTTTTAAAATGTTGCAATTT+TGG - chr2.1:22149509-22149528 MS.gene062586:intron 20.0%
!!! TTAAAAGCTTTTGACAAAAA+TGG - chr2.1:22150187-22150206 MS.gene062586:intron 20.0%
!!! TTAACAATGATAATGACAAA+GGG - chr2.1:22146616-22146635 MS.gene062586:CDS 20.0%
!!! TTGCAACATTTTAAAACTTA+GGG + chr2.1:22149506-22149525 None:intergenic 20.0%
!!! TTTGCCATTTTTTTAATAGA+AGG + chr2.1:22149535-22149554 None:intergenic 20.0%
!!! TTTTGTTCATAGATTCTTTA+GGG + chr2.1:22150300-22150319 None:intergenic 20.0%
! ACTAATTTCATTGTCTTTGT+TGG + chr2.1:22151040-22151059 None:intergenic 25.0%
! ACTATTATCATAAACTATCC+TGG + chr2.1:22149432-22149451 None:intergenic 25.0%
! ACTTATATGATAAGCACTAT+AGG - chr2.1:22149984-22150003 MS.gene062586:intron 25.0%
! AGAAACCTTCAAATTATTTG+AGG + chr2.1:22152493-22152512 None:intergenic 25.0%
! AGTATTGTAAGCAAATGTAT+GGG - chr2.1:22146670-22146689 MS.gene062586:CDS 25.0%
! ATAAAATCAATTTCTCCATG+AGG + chr2.1:22149897-22149916 None:intergenic 25.0%
! ATATATGAGAGATATCACTT+GGG - chr2.1:22152628-22152647 MS.gene062586:CDS 25.0%
! ATCTATGAACAAAATGTATC+AGG - chr2.1:22150306-22150325 MS.gene062586:intron 25.0%
! CATTCTCAAATTTAGAAACA+TGG - chr2.1:22151403-22151422 MS.gene062586:intron 25.0%
! CCATTGGAAATCAATTTATT+GGG + chr2.1:22146555-22146574 None:intergenic 25.0%
! GACATTTAGCATGTAAAATA+TGG + chr2.1:22147538-22147557 None:intergenic 25.0%
! GATCATATTTCTCTTATGTT+AGG + chr2.1:22149598-22149617 None:intergenic 25.0%
! GATGATTGTTTATTAGACAT+GGG - chr2.1:22151515-22151534 MS.gene062586:intron 25.0%
! TAACATATAACAATCATGTC+AGG + chr2.1:22150351-22150370 None:intergenic 25.0%
! TATAGTGCTTATCATATAAG+TGG + chr2.1:22149985-22150004 None:intergenic 25.0%
! TATATATGAGAGATATCACT+TGG - chr2.1:22152627-22152646 MS.gene062586:CDS 25.0%
! TATGCCAAGTTATTGAATAA+AGG + chr2.1:22151170-22151189 None:intergenic 25.0%
! TCAATTTATTGGGAAGAAAA+CGG + chr2.1:22146545-22146564 None:intergenic 25.0%
! TCCATTGGAAATCAATTTAT+TGG + chr2.1:22146556-22146575 None:intergenic 25.0%
! TCTGATATATACAGTTAAGA+GGG + chr2.1:22147707-22147726 None:intergenic 25.0%
! TGCGATTTCCTAAAATATTA+AGG + chr2.1:22148831-22148850 None:intergenic 25.0%
! TTAAGGGAATCAAATAATAG+TGG - chr2.1:22147647-22147666 MS.gene062586:CDS 25.0%
! TTATGTACGTAGAAAACTAT+GGG + chr2.1:22150020-22150039 None:intergenic 25.0%
! TTGATTCCCTTAAAAAAAAG+AGG + chr2.1:22147640-22147659 None:intergenic 25.0%
!! AAATTGAACTTCTTTTCTTG+AGG - chr2.1:22149838-22149857 MS.gene062586:intron 25.0%
!! AACAACTTCCATTTTAAACT+TGG + chr2.1:22148801-22148820 None:intergenic 25.0%
!! AATAAGTTGAAAACAACTGA+TGG - chr2.1:22150523-22150542 MS.gene062586:intron 25.0%
!! AGAATTTGAGTTTATCCATT+TGG + chr2.1:22151088-22151107 None:intergenic 25.0%
!! CTTAACAATGATAATGACAA+AGG - chr2.1:22146615-22146634 MS.gene062586:CDS 25.0%
!! GAAGATACAACAAAGTATTT+AGG + chr2.1:22146969-22146988 None:intergenic 25.0%
!! GTATCTAATATCATTGGTTA+TGG - chr2.1:22152760-22152779 MS.gene062586:CDS 25.0%
!! TAAAAATGGTTTTTCTCTTG+TGG - chr2.1:22147244-22147263 MS.gene062586:intron 25.0%
!! TAACAATGATAATGACAAAG+GGG - chr2.1:22146617-22146636 MS.gene062586:CDS 25.0%
!! TATTTTACATGCTAAATGTC+CGG - chr2.1:22147538-22147557 MS.gene062586:CDS 25.0%
!! TTGGCCTTCTATTAAAAAAA+TGG - chr2.1:22149528-22149547 MS.gene062586:intron 25.0%
!!! ATAAGTGTCTCTTTTTTTTG+AGG - chr2.1:22147589-22147608 MS.gene062586:CDS 25.0%
!!! ATTGCCATTTTTTTAATAGG+GGG - chr2.1:22149713-22149732 MS.gene062586:intron 25.0%
!!! CAACTTTTTTAGAAGATAAG+GGG + chr2.1:22149627-22149646 None:intergenic 25.0%
!!! GCAACTTTTTTAGAAGATAA+GGG + chr2.1:22149628-22149647 None:intergenic 25.0%
!!! TATAAACCTGGTTTTCAAAA+AGG + chr2.1:22147173-22147192 None:intergenic 25.0%
!!! TGCAACATTTTAAAACTTAG+GGG + chr2.1:22149505-22149524 None:intergenic 25.0%
!!! TGCAACTTTTTTAGAAGATA+AGG + chr2.1:22149629-22149648 None:intergenic 25.0%
!!! TGGTCATTTATTTCTGATTT+TGG - chr2.1:22146719-22146738 MS.gene062586:intron 25.0%
!!! TTGATCAAGTGTTGAAAAAA+TGG + chr2.1:22151468-22151487 None:intergenic 25.0%
AACTCAAATTCTAGTAAAGC+AGG - chr2.1:22151096-22151115 MS.gene062586:intron 30.0%
AAGAATTAAGGATTCAGGAA+GGG + chr2.1:22146859-22146878 None:intergenic 30.0%
AAGTCATGCTCAAAATGATA+TGG - chr2.1:22150723-22150742 MS.gene062586:CDS 30.0%
AATGATGAGAGAAACTATCA+AGG + chr2.1:22148656-22148675 None:intergenic 30.0%
ACTTCATGTATGAAATGCAT+AGG + chr2.1:22148402-22148421 None:intergenic 30.0%
AGCAATACCAAGAAGAATTA+AGG + chr2.1:22146871-22146890 None:intergenic 30.0%
AGCATATTTCCCTAAACATA+AGG + chr2.1:22149565-22149584 None:intergenic 30.0%
ATATACAGTTAAGAGGGAAT+AGG + chr2.1:22147701-22147720 None:intergenic 30.0%
ATGAGTCAAAAATTAAGTGG+TGG - chr2.1:22151345-22151364 MS.gene062586:CDS 30.0%
ATTATCATAAACTATCCTGG+AGG + chr2.1:22149429-22149448 None:intergenic 30.0%
ATTCCATGGAGAATCATATT+TGG - chr2.1:22146758-22146777 MS.gene062586:intron 30.0%
CATATTTCCCTAAACATAAG+GGG + chr2.1:22149563-22149582 None:intergenic 30.0%
CATATTTCTCTTATGTTAGG+AGG + chr2.1:22149595-22149614 None:intergenic 30.0%
CATGATGAAGTACACTATTA+GGG + chr2.1:22150043-22150062 None:intergenic 30.0%
CCAATGATATTAGATACAAG+AGG + chr2.1:22152757-22152776 None:intergenic 30.0%
CCTCTTGTATCTAATATCAT+TGG - chr2.1:22152754-22152773 MS.gene062586:CDS 30.0%
CTAAAACCATTTAGCAACAT+AGG + chr2.1:22151945-22151964 None:intergenic 30.0%
CTGATAAAGATGCTATCAAA+AGG - chr2.1:22150776-22150795 MS.gene062586:intron 30.0%
GAACAAATCTTCAAGATTCT+TGG - chr2.1:22146792-22146811 MS.gene062586:intron 30.0%
GATACCTCATATTCATCAAA+TGG - chr2.1:22148024-22148043 MS.gene062586:intron 30.0%
GCAATTGTTTGTATTGTGAT+GGG - chr2.1:22152677-22152696 MS.gene062586:CDS 30.0%
GCATATTTCCCTAAACATAA+GGG + chr2.1:22149564-22149583 None:intergenic 30.0%
GGATGATTGTTTATTAGACA+TGG - chr2.1:22151514-22151533 MS.gene062586:intron 30.0%
GTCTGATATATACAGTTAAG+AGG + chr2.1:22147708-22147727 None:intergenic 30.0%
GTGTTTATGAACAACATTCT+TGG - chr2.1:22152581-22152600 MS.gene062586:CDS 30.0%
GTTATGTACGTAGAAAACTA+TGG + chr2.1:22150021-22150040 None:intergenic 30.0%
TAAAGAGCTGCATATTTCAT+TGG + chr2.1:22149102-22149121 None:intergenic 30.0%
TATACAGTTAAGAGGGAATA+GGG + chr2.1:22147700-22147719 None:intergenic 30.0%
TATTCACTAAAACACGACTA+TGG - chr2.1:22151188-22151207 MS.gene062586:intron 30.0%
TCAAATAATATAGGGATCCT+AGG + chr2.1:22152205-22152224 None:intergenic 30.0%
TCTTCCATTTGATGAATATG+AGG + chr2.1:22148031-22148050 None:intergenic 30.0%
TGAGTCAAAAATTAAGTGGT+GGG - chr2.1:22151346-22151365 MS.gene062586:CDS 30.0%
TTTGAGTCAATGCAGATTTA+TGG - chr2.1:22152554-22152573 MS.gene062586:CDS 30.0%
! AAGTAAAAGAGTTGTTGCTT+GGG - chr2.1:22150116-22150135 MS.gene062586:CDS 30.0%
! AGAATAAAACAAGCTTTGAC+TGG - chr2.1:22148048-22148067 MS.gene062586:intron 30.0%
! ATTAGATACAAGAGGTATGT+TGG + chr2.1:22152749-22152768 None:intergenic 30.0%
! CCCAATAAATTGATTTCCAA+TGG - chr2.1:22146552-22146571 MS.gene062586:CDS 30.0%
! CGGTTTATAATTTTGTGAAC+CGG + chr2.1:22147220-22147239 None:intergenic 30.0%
! CTTCTTCACTATTTTATCCT+TGG - chr2.1:22152169-22152188 MS.gene062586:intron 30.0%
! CTTTTAACATGTCTGCTATT+TGG + chr2.1:22150174-22150193 None:intergenic 30.0%
! GAGTATTGTAAGCAAATGTA+TGG - chr2.1:22146669-22146688 MS.gene062586:CDS 30.0%
! GTTTCAAAATGTTGCGATTT+TGG + chr2.1:22149739-22149758 None:intergenic 30.0%
! TAGTTATCACTTCTTTAAGG+AGG - chr2.1:22149448-22149467 MS.gene062586:intron 30.0%
! TATAGTAATTTGGAATTGGG+AGG - chr2.1:22148978-22148997 MS.gene062586:CDS 30.0%
! TTAGATACAAGAGGTATGTT+GGG + chr2.1:22152748-22152767 None:intergenic 30.0%
! TTTAAGGAGGAGTTGTTATT+AGG - chr2.1:22149461-22149480 MS.gene062586:intron 30.0%
!! ACCAAAGAAGAATTTGTTAG+TGG - chr2.1:22150223-22150242 MS.gene062586:intron 30.0%
!! AGTGAGAATGAATTTGTTGA+TGG - chr2.1:22151057-22151076 MS.gene062586:intron 30.0%
!! CTCTAAAATTTGTAGCCAAA+GGG + chr2.1:22151725-22151744 None:intergenic 30.0%
!! CTTTTGATAGCATCTTTATC+AGG + chr2.1:22150778-22150797 None:intergenic 30.0%
!! TATGAGTACTTGTTATTCCA+TGG - chr2.1:22146744-22146763 MS.gene062586:intron 30.0%
!! TCTCTAAAATTTGTAGCCAA+AGG + chr2.1:22151726-22151745 None:intergenic 30.0%
!! TTCAATCCTTTTTGAAAACC+AGG - chr2.1:22147164-22147183 MS.gene062586:intron 30.0%
!!! ATTACTACTTTTTTTGTGGC+TGG + chr2.1:22151772-22151791 None:intergenic 30.0%
!!! GCAACATTTTAAAACTTAGG+GGG + chr2.1:22149504-22149523 None:intergenic 30.0%
!!! TTTTGAACACTTGCTATTAG+AGG + chr2.1:22151651-22151670 None:intergenic 30.0%
AAAAGTGACCCCTTATGTTT+AGG - chr2.1:22149552-22149571 MS.gene062586:intron 35.0%
AAAAGTGGAACGAAAACTAG+TGG + chr2.1:22152708-22152727 None:intergenic 35.0%
AAAGTGACCCCTTATGTTTA+GGG - chr2.1:22149553-22149572 MS.gene062586:intron 35.0%
AAATCTGACTCACCCATTTA+TGG + chr2.1:22149254-22149273 None:intergenic 35.0%
AACTGATGCAATCTCAATCT+CGG - chr2.1:22148860-22148879 MS.gene062586:intron 35.0%
AATAGTGTACTTCATCATGC+AGG - chr2.1:22150044-22150063 MS.gene062586:CDS 35.0%
ACCATGAATTCAGTCAACAT+GGG - chr2.1:22150071-22150090 MS.gene062586:CDS 35.0%
ACGTAGTAAGACGTGTATTA+AGG + chr2.1:22148106-22148125 None:intergenic 35.0%
AGAAAAGAACGTGAACTGAA+GGG - chr2.1:22150679-22150698 MS.gene062586:CDS 35.0%
AGCTATAGCATATGTGATGT+TGG - chr2.1:22151596-22151615 MS.gene062586:intron 35.0%
AGCTCAAAATCTTCTTCTCA+TGG - chr2.1:22151120-22151139 MS.gene062586:intron 35.0%
ATGGAAGAGAATCAAACCAA+AGG - chr2.1:22151555-22151574 MS.gene062586:intron 35.0%
ATTTGCTTACAATACTCCTC+TGG + chr2.1:22146666-22146685 None:intergenic 35.0%
CAAATAGGAGTAAGTGAAAG+GGG + chr2.1:22148718-22148737 None:intergenic 35.0%
CATCTCATACTTCATTTACC+AGG - chr2.1:22148690-22148709 MS.gene062586:intron 35.0%
CATGCTCAAAATGATATGGT+TGG - chr2.1:22150727-22150746 MS.gene062586:CDS 35.0%
CCAAGAAGAATTAAGGATTC+AGG + chr2.1:22146864-22146883 None:intergenic 35.0%
CCAAGAATGTTGTTAGAACA+TGG + chr2.1:22146702-22146721 None:intergenic 35.0%
CCATGTTCTAACAACATTCT+TGG - chr2.1:22146699-22146718 MS.gene062586:CDS 35.0%
CCTGAATCCTTAATTCTTCT+TGG - chr2.1:22146861-22146880 MS.gene062586:intron 35.0%
CGTAGTAAGACGTGTATTAA+GGG + chr2.1:22148105-22148124 None:intergenic 35.0%
CTAAAGCCTATGTTGCTAAA+TGG - chr2.1:22151936-22151955 MS.gene062586:intron 35.0%
CTAATGTAGCTGCCATAAAT+GGG - chr2.1:22149239-22149258 MS.gene062586:intron 35.0%
CTCAAAATGATATGGTTGGT+AGG - chr2.1:22150731-22150750 MS.gene062586:CDS 35.0%
GAAGAATTAAGGATTCAGGA+AGG + chr2.1:22146860-22146879 None:intergenic 35.0%
GAAGTAAAAGAGTTGTTGCT+TGG - chr2.1:22150115-22150134 MS.gene062586:CDS 35.0%
GAATAACCTATTGCATCACA+AGG + chr2.1:22150887-22150906 None:intergenic 35.0%
GAGTCAAAAATTAAGTGGTG+GGG - chr2.1:22151347-22151366 MS.gene062586:CDS 35.0%
GATAGGTTATGGCATTACTA+TGG - chr2.1:22148522-22148541 MS.gene062586:CDS 35.0%
GCAAATAGGAGTAAGTGAAA+GGG + chr2.1:22148719-22148738 None:intergenic 35.0%
GCATGATGAAGTACACTATT+AGG + chr2.1:22150044-22150063 None:intergenic 35.0%
GCCACTAACAAATTCTTCTT+TGG + chr2.1:22150227-22150246 None:intergenic 35.0%
GCTATAGCATATGTGATGTT+GGG - chr2.1:22151597-22151616 MS.gene062586:intron 35.0%
GGATATAGACACTAGAAAGA+TGG - chr2.1:22148543-22148562 MS.gene062586:CDS 35.0%
GGCAATTGTTTGTATTGTGA+TGG - chr2.1:22152676-22152695 MS.gene062586:CDS 35.0%
TACCATGAATTCAGTCAACA+TGG - chr2.1:22150070-22150089 MS.gene062586:CDS 35.0%
TACTTCTCACACAATGTATG+AGG - chr2.1:22151791-22151810 MS.gene062586:intron 35.0%
TAGAAAGATGGCAAGAATCA+TGG - chr2.1:22148555-22148574 MS.gene062586:CDS 35.0%
TCCTTGGTTTATATACTCCT+AGG - chr2.1:22152185-22152204 MS.gene062586:intron 35.0%
TGAATCTTCTTCTAATCCAG+AGG - chr2.1:22146647-22146666 MS.gene062586:CDS 35.0%
TGCAAATAGGAGTAAGTGAA+AGG + chr2.1:22148720-22148739 None:intergenic 35.0%
TGGAAGAGAATCAAACCAAA+GGG - chr2.1:22151556-22151575 MS.gene062586:intron 35.0%
TTGAAATTGAGTAGCTAGCT+AGG + chr2.1:22146930-22146949 None:intergenic 35.0%
TTGAACATCATCAACTCCAT+TGG + chr2.1:22146571-22146590 None:intergenic 35.0%
TTGGCCCCCTATTAAAAAAA+TGG + chr2.1:22149720-22149739 None:intergenic 35.0%
! AACAGACTTTTATCAAGCCA+TGG - chr2.1:22150644-22150663 MS.gene062586:CDS 35.0%
! GCTAGTGCTTTTGATATTCT+TGG - chr2.1:22146831-22146850 MS.gene062586:intron 35.0%
! TACTATGTTGTCACTTCTTG+CGG - chr2.1:22151623-22151642 MS.gene062586:intron 35.0%
! TATCACTTGGGAATTTTCAG+CGG - chr2.1:22152640-22152659 MS.gene062586:CDS 35.0%
! TCCTAGGAGTATATAAACCA+AGG + chr2.1:22152189-22152208 None:intergenic 35.0%
! TGTTCATAGATTCTTTAGGG+AGG + chr2.1:22150297-22150316 None:intergenic 35.0%
!! CTCTTTCATTTTAGTCCCTT+TGG - chr2.1:22151707-22151726 MS.gene062586:intron 35.0%
!!! AGTCTTGTTTTCTCAATCTG+AGG + chr2.1:22149127-22149146 None:intergenic 35.0%
!!! ATCGCAACATTTTGAAACCT+AGG - chr2.1:22149741-22149760 MS.gene062586:intron 35.0%
!!! TGGCATCACCTTTATTTTAG+TGG + chr2.1:22147518-22147537 None:intergenic 35.0%
AATGGGTGAGTCAGATTTCA+TGG - chr2.1:22149256-22149275 MS.gene062586:intron 40.0%
ACATATGCGCTTATGCTAGA+AGG + chr2.1:22150419-22150438 None:intergenic 40.0%
ACTTAAACTCTCAGCAGACT+TGG - chr2.1:22147064-22147083 MS.gene062586:intron 40.0%
AGTTAAGAGGGAATAGGGAT+AGG + chr2.1:22147695-22147714 None:intergenic 40.0%
ATCTTCAAGATTCTTGGTCC+AGG - chr2.1:22146798-22146817 MS.gene062586:intron 40.0%
CAGCCAAATATGATTCTCCA+TGG + chr2.1:22146764-22146783 None:intergenic 40.0%
CATATGCGCTTATGCTAGAA+GGG + chr2.1:22150418-22150437 None:intergenic 40.0%
CATGAATTCAGTCAACATGG+GGG - chr2.1:22150073-22150092 MS.gene062586:CDS 40.0%
CCATGAATTCAGTCAACATG+GGG - chr2.1:22150072-22150091 MS.gene062586:CDS 40.0%
CCATTTATGGCAGCTACATT+AGG + chr2.1:22149241-22149260 None:intergenic 40.0%
CCTAATGTAGCTGCCATAAA+TGG - chr2.1:22149238-22149257 MS.gene062586:intron 40.0%
CCTCACTACTTTCTCTAACT+CGG + chr2.1:22150950-22150969 None:intergenic 40.0%
CGAGTTAGAGAAAGTAGTGA+GGG - chr2.1:22150948-22150967 MS.gene062586:intron 40.0%
CTAACTCGGATCTTGAAACA+TGG + chr2.1:22150936-22150955 None:intergenic 40.0%
GAGAAAAGAACGTGAACTGA+AGG - chr2.1:22150678-22150697 MS.gene062586:CDS 40.0%
GAGTAGGAATCTGCATTATG+AGG + chr2.1:22148600-22148619 None:intergenic 40.0%
GGAAGAGAATCAAACCAAAG+GGG - chr2.1:22151557-22151576 MS.gene062586:intron 40.0%
GGAAGATGTTGAGAAGGTAA+TGG - chr2.1:22151536-22151555 MS.gene062586:intron 40.0%
GTAGAGAAAGAGAACAGAGT+AGG + chr2.1:22148616-22148635 None:intergenic 40.0%
GTCCTCTCTGATATTTGTGT+CGG + chr2.1:22150152-22150171 None:intergenic 40.0%
GTTAAGAGGGAATAGGGATA+GGG + chr2.1:22147694-22147713 None:intergenic 40.0%
TAACCAGACAAAGCATGCTT+TGG - chr2.1:22150261-22150280 MS.gene062586:intron 40.0%
TATCCAAAGCATGCTTTGTC+TGG + chr2.1:22150267-22150286 None:intergenic 40.0%
TATCCTGGAGGAGAGTTTAT+GGG + chr2.1:22149417-22149436 None:intergenic 40.0%
TCTACAAAAGATCCTAGCTG+AGG - chr2.1:22149207-22149226 MS.gene062586:intron 40.0%
TGTTGGCATCAAGATCATGA+AGG + chr2.1:22151023-22151042 None:intergenic 40.0%
TTGCTTGCCAACAATAACAC+AGG + chr2.1:22147977-22147996 None:intergenic 40.0%
TTTCTCACGTGTTCAATCCA+TGG + chr2.1:22150664-22150683 None:intergenic 40.0%
! AGGTTATTCGAGCAAGTTGA+TGG - chr2.1:22150898-22150917 MS.gene062586:intron 40.0%
! ATACAAGAGGTATGTTGGGA+AGG + chr2.1:22152744-22152763 None:intergenic 40.0%
! ATTCTTGGTCCAGGTGTTTT+TGG - chr2.1:22146807-22146826 MS.gene062586:intron 40.0%
! CAATTATGACCCCTGTTTTG+GGG - chr2.1:22149647-22149666 MS.gene062586:intron 40.0%
! CACTGGACTTTCAAGTGATA+AGG - chr2.1:22147870-22147889 MS.gene062586:intron 40.0%
! CTGAAGGGACATCTTATTTC+TGG - chr2.1:22150694-22150713 MS.gene062586:CDS 40.0%
! GCAATTATGACCCCTGTTTT+GGG - chr2.1:22149646-22149665 MS.gene062586:intron 40.0%
! TGCAATTATGACCCCTGTTT+TGG - chr2.1:22149645-22149664 MS.gene062586:intron 40.0%
! TGTTTCTTGTTGTCAGTCAC+TGG - chr2.1:22147853-22147872 MS.gene062586:intron 40.0%
!! ATATTGTAGTGGACTGAGAG+AGG + chr2.1:22151828-22151847 None:intergenic 40.0%
!! CAAAAATTCTCTGAAGCTGC+AGG - chr2.1:22151666-22151685 MS.gene062586:intron 40.0%
!! CACTAATGGCCATTTTCAAC+TGG - chr2.1:22149804-22149823 MS.gene062586:intron 40.0%
!! GAACAACATTCTTGGCTTTG+TGG - chr2.1:22152589-22152608 MS.gene062586:CDS 40.0%
!! TATTCTAGTTTGGCCTCTAC+CGG + chr2.1:22147560-22147579 None:intergenic 40.0%
!! TTGTTGATGGCTTCACCAAA+TGG - chr2.1:22151070-22151089 MS.gene062586:intron 40.0%
!!! GCAACATTTTGAAACCTAGG+AGG - chr2.1:22149744-22149763 MS.gene062586:intron 40.0%
ACATGCTAAATGTCCGGTAG+AGG - chr2.1:22147544-22147563 MS.gene062586:CDS 45.0%
ACTGGAGTTGGATTGTTAGC+TGG - chr2.1:22147916-22147935 MS.gene062586:intron 45.0%
AGCCGACACAAATATCAGAG+AGG - chr2.1:22150147-22150166 MS.gene062586:CDS 45.0%
AGCTAACAATCCAACTCCAG+TGG + chr2.1:22147917-22147936 None:intergenic 45.0%
ATTCCCATAAACTCTCCTCC+AGG - chr2.1:22149411-22149430 MS.gene062586:intron 45.0%
CAAAAGATCCTAGCTGAGGA+TGG - chr2.1:22149211-22149230 MS.gene062586:intron 45.0%
CCGAGTTAGAGAAAGTAGTG+AGG - chr2.1:22150947-22150966 MS.gene062586:intron 45.0%
CTATCCTGGAGGAGAGTTTA+TGG + chr2.1:22149418-22149437 None:intergenic 45.0%
CTCGATGAGCCAGTTGAAAA+TGG + chr2.1:22149816-22149835 None:intergenic 45.0%
CTTGCTCCTTGTGATGCAAT+AGG - chr2.1:22150878-22150897 MS.gene062586:intron 45.0%
GAATCATATTTGGCTGCTGG+AGG - chr2.1:22146768-22146787 MS.gene062586:intron 45.0%
GACATGGGAAGATGTTGAGA+AGG - chr2.1:22151530-22151549 MS.gene062586:intron 45.0%
GGAATCTGCATTATGAGGAG+TGG + chr2.1:22148595-22148614 None:intergenic 45.0%
GGAGAATCATATTTGGCTGC+TGG - chr2.1:22146765-22146784 MS.gene062586:intron 45.0%
! ATTTTCAGCGGATGTACTGG+TGG - chr2.1:22152652-22152671 MS.gene062586:CDS 45.0%
! CCCCATGTTGACTGAATTCA+TGG + chr2.1:22150075-22150094 None:intergenic 45.0%
! CTCAGCAGACTTGGTAAGAT+GGG - chr2.1:22147073-22147092 MS.gene062586:intron 45.0%
! GGAATTTTCAGCGGATGTAC+TGG - chr2.1:22152649-22152668 MS.gene062586:CDS 45.0%
! GGCGTCTTCTCAGCAATTTT+GGG - chr2.1:22149675-22149694 MS.gene062586:intron 45.0%
! GTAGTGAGGGAGACTCATTT+TGG - chr2.1:22150961-22150980 MS.gene062586:intron 45.0%
! TCTCAGCAGACTTGGTAAGA+TGG - chr2.1:22147072-22147091 MS.gene062586:intron 45.0%
! TGGCGTCTTCTCAGCAATTT+TGG - chr2.1:22149674-22149693 MS.gene062586:intron 45.0%
!! GAGGGAGACTCATTTTGGTA+AGG - chr2.1:22150966-22150985 MS.gene062586:intron 45.0%
!! TTCGTTCCACTTTTCCTCTG+TGG - chr2.1:22152714-22152733 MS.gene062586:CDS 45.0%
!!! CAGCAATTTTGGGACGAAAG+CGG - chr2.1:22149685-22149704 MS.gene062586:intron 45.0%
!! AAAAAAAAAAAAAAATTACA+AGG + chr2.1:22147355-22147374 None:intergenic 5.0%
!! AAAAATATTCAAATAATATA+GGG + chr2.1:22152213-22152232 None:intergenic 5.0%
!! GATTTAAAAAAAAAAAAAAA+TGG + chr2.1:22147135-22147154 None:intergenic 5.0%
!! TAAAAATATTCAAATAATAT+AGG + chr2.1:22152214-22152233 None:intergenic 5.0%
!!! TTATTTGAATATTTTTAAAT+AGG - chr2.1:22152217-22152236 MS.gene062586:intron 5.0%
!!! TTTTAAAAAAAATTTATGAT+AGG - chr2.1:22148505-22148524 MS.gene062586:CDS 5.0%
AAACCAAAGGGGTGACTGCA+TGG - chr2.1:22151568-22151587 MS.gene062586:intron 50.0%
ACGTGTGAGATGACACCTCA+TGG - chr2.1:22149879-22149898 MS.gene062586:intron 50.0%
CACAACTGTGAGAAGCAGGA+TGG + chr2.1:22147947-22147966 None:intergenic 50.0%
CCTGCTTCTCACAGTTGTGT+GGG - chr2.1:22147948-22147967 MS.gene062586:intron 50.0%
CTGCTTCTCACAGTTGTGTG+GGG - chr2.1:22147949-22147968 MS.gene062586:intron 50.0%
GAGTATGCTTCCACTGGAGT+TGG - chr2.1:22147904-22147923 MS.gene062586:intron 50.0%
GCACTAGCACCAAAAACACC+TGG + chr2.1:22146819-22146838 None:intergenic 50.0%
GGATGTCCACAGAGGAAAAG+TGG + chr2.1:22152723-22152742 None:intergenic 50.0%
TAACCATGCAGTCACCCCTT+TGG + chr2.1:22151574-22151593 None:intergenic 50.0%
TAGGAGTTCCATCCTCAGCT+AGG + chr2.1:22149222-22149241 None:intergenic 50.0%
TCCTGCTTCTCACAGTTGTG+TGG - chr2.1:22147947-22147966 MS.gene062586:intron 50.0%
TGCTTCTCACAGTTGTGTGG+GGG - chr2.1:22147950-22147969 MS.gene062586:intron 50.0%
TGGTAAGGCTGTAGATGCAG+AGG - chr2.1:22150981-22151000 MS.gene062586:intron 50.0%
! AACTGCACTTTTCGCCTCCT+AGG + chr2.1:22149761-22149780 None:intergenic 50.0%
! TGGGGGACCTGTGTTATTGT+TGG - chr2.1:22147967-22147986 MS.gene062586:intron 50.0%
!! TTCGAGCAAGTTGATGGCGA+TGG - chr2.1:22150904-22150923 MS.gene062586:intron 50.0%
CCCACACAACTGTGAGAAGC+AGG + chr2.1:22147951-22147970 None:intergenic 55.0%
GTTGGGAAGGATGTCCACAG+AGG + chr2.1:22152731-22152750 None:intergenic 55.0%
! GCGCAAGAGTATGCTTCCAC+TGG - chr2.1:22147898-22147917 MS.gene062586:intron 55.0%
! TTCAGCGGATGTACTGGTGG+TGG - chr2.1:22152655-22152674 MS.gene062586:CDS 55.0%
!! GAGTAAGTGAAAGGGGCACC+TGG + chr2.1:22148711-22148730 None:intergenic 55.0%
ACGCCACGTGCCCCAAAACA+GGG + chr2.1:22149660-22149679 None:intergenic 60.0%
CGCCACGTGCCCCAAAACAG+GGG + chr2.1:22149659-22149678 None:intergenic 65.0%
GACGCCACGTGCCCCAAAAC+AGG + chr2.1:22149661-22149680 None:intergenic 65.0%
!!! GACCCCTGTTTTGGGGCACG+TGG - chr2.1:22149654-22149673 MS.gene062586:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 22146471 22152817 22146471 ID=MS.gene062586
chr2.1 mRNA 22146471 22152817 22146471 ID=MS.gene062586.t1;Parent=MS.gene062586
chr2.1 exon 22152406 22152817 22152406 ID=MS.gene062586.t1.exon1;Parent=MS.gene062586.t1
chr2.1 CDS 22152406 22152817 22152406 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22151219 22151419 22151219 ID=MS.gene062586.t1.exon2;Parent=MS.gene062586.t1
chr2.1 CDS 22151219 22151419 22151219 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22150577 22150761 22150577 ID=MS.gene062586.t1.exon3;Parent=MS.gene062586.t1
chr2.1 CDS 22150577 22150761 22150577 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22150028 22150173 22150028 ID=MS.gene062586.t1.exon4;Parent=MS.gene062586.t1
chr2.1 CDS 22150028 22150173 22150028 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22148961 22149222 22148961 ID=MS.gene062586.t1.exon5;Parent=MS.gene062586.t1
chr2.1 CDS 22148961 22149222 22148961 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22148491 22148639 22148491 ID=MS.gene062586.t1.exon6;Parent=MS.gene062586.t1
chr2.1 CDS 22148491 22148639 22148491 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22148136 22148388 22148136 ID=MS.gene062586.t1.exon7;Parent=MS.gene062586.t1
chr2.1 CDS 22148136 22148388 22148136 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22147476 22147757 22147476 ID=MS.gene062586.t1.exon8;Parent=MS.gene062586.t1
chr2.1 CDS 22147476 22147757 22147476 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
chr2.1 exon 22146471 22146719 22146471 ID=MS.gene062586.t1.exon9;Parent=MS.gene062586.t1
chr2.1 CDS 22146471 22146719 22146471 ID=cds.MS.gene062586.t1;Parent=MS.gene062586.t1
Gene Sequence

>MS.gene062586

ATGAGAAACATTACAAAAATAGCATGCTTCAATATTCTCTTTCTTTCTATAATAGCACTTCATGTTCAATGCCGTTTTCTTCCCAATAAATTGATTTCCAATGGAGTTGATGATGTTCAATCAGAAGAAGATTCTTATCTACTTCTTAACAATGATAATGACAAAGGGGTTGTTATTGAATCTTCTTCTAATCCAGAGGAGTATTGTAAGCAAATGTATGGGTTTTTGCCATGTTCTAACAACATTCTTGGTCATTTATTTCTGATTTTGGTTTATGAGTACTTGTTATTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATCTTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCCCTTCCTGAATCCTTAATTCTTCTTGGTATTGCTTCTTACTCTCAAAAATATAAATATCTTTAGTTGCATCCTAGCTAGCTACTCAATTTCAAAACATTTTTTGAACATCCTAAATACTTTGTTGTATCTTCATAGCAATTGCTATTTACATACTTTTTTCTAATTGTGTAGTTCTTGTTTTTTGTTTAATACTTTCAAAGCATTTTACTTAAACTCTCAGCAGACTTGGTAAGATGGGAGCAAATGTTTGAGATAAGCTTTGTTTCTTTTTCTTCCATTTTTTTTTTTTTTTAAATCTTTTGTAAATTCAATCCTTTTTGAAAACCAGGTTTATAAAAAAATCCATTATAAAAATATAACCGGTTCACAAAATTATAAACCGAATTTAAAAATGGTTTTTCTCTTGTGGTTTTGTTTGTATATGTATGTACTATATAGTTATCTTTGTCGATATGAACATAAGTCACACTTTCATACATACGAATTATATGTCTCCTTGTAATTTTTTTTTTTTTTTATGAACATACGTCTCTTTGTAATTTTAGTCTCTACACCTTCTTTTTTTTCTCTTCATTTGAGTCATTGAAAAATAAAGAAATGCTACTAGATCTCATTATTTTGTTCTAGTTCTTATAATATATCAATCATGTTGAATTACCACTAAAATAAAGGTGATGCCATATTTTACATGCTAAATGTCCGGTAGAGGCCAAACTAGAATAGATTTTTTTATAAGTGTCTCTTTTTTTTGAGGCCATCAAATATTAAATCAAAGAATACCTCTTTTTTTTAAGGGAATCAAATAATAGTGGCATGAATATGACATGACATAGCCCTATCCCTATTCCCTCTTAACTGTATATATCAGACACATACACATTTTTTTTTTAGAGGTACACATACACAAATTATTTAGATTCAAATATATTTGTAGACGTTAATATCTCACTATATACATATACATATAGACACACACATCAACTTCATTTTTTGTATGTTTCTTGTTGTCAGTCACTGGACTTTCAAGTGATAAGGAGAGTGCGCAAGAGTATGCTTCCACTGGAGTTGGATTGTTAGCTGGATCATCCATCCTGCTTCTCACAGTTGTGTGGGGGACCTGTGTTATTGTTGGCAAGCAAAGCTTTAAAAACGACTCTCATTCTTCTGATACCTCATATTCATCAAATGGAAGAATAAAACAAGCTTTGACTGGTTTGCTCTGAATTTTACATCTTTATTTAAATCCCTTAATACACGTCTTACTACGTAAAATGTAGAATTCTACATTTTTATTTAGAGTTTAATTTTTATACACATCAAATGTAGAATTTTACACTATTAACAAATCACAAACAATCATATATCTGACTTTAGAAGTAGTTATTATGATTACAATTATGATTGATTGAAAGTAAATAAAATATTTACATTTATGATGTATATGAATTAAATCTTATTTCTAACATTCAAACAAATATCTAAATGATAAAACATAACTAAATGTATGCGTAAAATAATTTTAAATGCATTCTTGAAAGAAACCTATGCATTTCATACATGAAGTTTCAAATTCTTCAATTAGGAGTACCTTAACTCCTTTATAGTTTTTTTTATTTGAATTCTAATGAGTAGTTTTTTTTTTTTTTTTTTTAAAAAAAATTTATGATAGGTTATGGCATTACTATGGATATAGACACTAGAAAGATGGCAAGAATCATGGTTTTCTCTGTTATTCCACTCCTCATAATGCAGATTCCTACTCTGTTCTCTTTCTCTACAACATTACGCAATGTGACCTTGATAGTTTCTCTCATCATTGCTGTCACGTTTCTCATCTCATACTTCATTTACCAGGTGCCCCTTTCACTTACTCCTATTTGCATTTAAGTTAATCTTTAAAATAACTATGTTTAGTAGTAAAATACCATTATAATATACAACCAAGTTTAAAATGGAAGTTGTTTTGTAAACCTTAATATTTTAGGAAATCGCAGTTAAATACAACTGATGCAATCTCAATCTCGGTTGCAACTCAAATTTTATATTATGATAATCTTTGATGTCACAACTCAAATTGCAGTCACATACTATTTTATAAAATCTAGTATCCAACTATACAATATAGTAATTTGGAATTGGGAGGCGAAATTTATCCATATAAATTAATTACTCAATTTGTAATAGACTAGTTTGACTCTCTTTTTGATATTTTTCAATGTCAAATTGTCTTCTTAATTTTATCCAATGAAATATGCAGCTCTTTAAACCTCAGATTGAGAAAACAAGACTAGAATACATAAAGCATGATGATTTAATTTTAAGAATTTTTCAACGTGTTGAAAAGCAAACTCTACAAAAGATCCTAGCTGAGGATGGAACTCCTAATGTAGCTGCCATAAATGGGTGAGTCAGATTTCATGGAATATTTCTCAACTGATTAAAGGCTGTTTGAATTAGTTTATTTGAACTTATCTACTAGCACAAACACTTGTGATACAGTTTAAGAGAACTTATAAAAACAAAAATGACATTTCCATATGTTGTTTTCAGATTATTCCCATAAACTCTCCTCCAGGATAGTTTATGATAATAGTTATCACTTCTTTAAGGAGGAGTTGTTATTAGGCTAAACTGCATTTTTCTCCCCCTAAGTTTTAAAATGTTGCAATTTTGGCCTTCTATTAAAAAAATGGCAAAAGTGACCCCTTATGTTTAGGGAAATATGCTCTTTTGACCTCCTAACATAAGAGAAATATGATCTTTTGACCCCTTATCTTCTAAAAAAGTTGCAATTATGACCCCTGTTTTGGGGCACGTGGCGTCTTCTCAGCAATTTTGGGACGAAAGCGGCCAAAATTGCCATTTTTTTAATAGGGGGCCAAAATCGCAACATTTTGAAACCTAGGAGGCGAAAAGTGCAGTTTAGCCTTGTTATTAATTAAATGACACTAATGGCCATTTTCAACTGGCTCATCGAGAGAAATTGAACTTCTTTTCTTGAGGTTACAAGATCAAACTCTTACGTGTGAGATGACACCTCATGGAGAAATTGATTTTATTTTATCTTAAATGAAAACAATTTGATTTTAGTTTATCTTTTGTTATAGAAATCACTTATATATAACCACTTATATGATAAGCACTATAGGAAAACAATTTCCCATAGTTTTCTACGTACATAACCCTAATAGTGTACTTCATCATGCAGGCTATACCATGAATTCAGTCAACATGGGGGAAAACACTTATCAACTTCTGAAGTAAAAGAGTTGTTGCTTGGGAACAATTTAGCCGACACAAATATCAGAGAGGACCAAATAGCAGACATGTTAAAAGCTTTTGACAAAAATGGCGATCAAATTATAACCAAAGAAGAATTTGTTAGTGGCTTAACAGAATATATTAACCAGACAAAGCATGCTTTGGATAGAAAGTACCTCCCTAAAGAATCTATGAACAAAATGTATCAGGTAAGTAATGCAATTCAAAGCCTGACATGATTGTTATATGTTATAATGATATTTTTCTTGCACAATCTACTATTACATGATATAACACCCTTCTAGCATAAGCGCATATGTATAAGCTATTGCTGTAACAAATGATAAAATAAAGTCAAACTATTTTAATAAATTCTATAAGTTGTATCTTATAGAGTTTATAAAAATAAGTTGAAAACAACTGATGGACATGTTCTCTATTTCTATAAGCTCTCGCAAACAGTCTCACAAATGCTTATGTCAGCTGATAAGTTCAAATAATTCAATACAATCTTATTGTATTTTAAACAGACTTTTATCAAGCCATGGATTGAACACGTGAGAAAAGAACGTGAACTGAAGGGACATCTTATTTCTGGAGTCTTAAGTCATGCTCAAAATGATATGGTTGGTAGGATGCTCAATGATGATGGTACACCTGATAAAGATGCTATCAAAAGGTCTGCATATTTATATCTTTGATTACACGTACCGACAGTATATATAAATGTTTTTTTTTTTTTTTTTTTATGCATATTCTCTTGCTCCTTGTGATGCAATAGGTTATTCGAGCAAGTTGATGGCGATGGCGATAACCATGTTTCAAGATCCGAGTTAGAGAAAGTAGTGAGGGAGACTCATTTTGGTAAGGCTGTAGATGCAGAGGAAGCAGTCTCAAAACTCCTTCATGATCTTGATGCCAACAAAGACAATGAAATTAGTGAGAATGAATTTGTTGATGGCTTCACCAAATGGATAAACTCAAATTCTAGTAAAGCAGGAAGCTCAAAATCTTCTTCTCATGGAACTCATCAAGTATTTCCCTTATTCCTTTATTCAATAACTTGGCATATTCACTAAAACACGACTATGGCCTTCCCTTTTTTAAATTATAAAATATAGTCCCCAATTTGTGAAATTTATGAAAAAAAATTCACATTGAATTTCAGGTTTATTTGTCTTGATGCACTATCTTGAATAATGAGATGACAAGTTTCAGCATGATAAATGAGTCAAAAATTAAGTGGTGGGGAAAATTTCTCAAAATTTTAAAATTTAGGGACTACATTCTCAAATTTAGAAACATGGATACTAAATTGACTAAAATTGCATTTAAACTAATTTCTTCCATTTTTTCAACACTTGATCAATAACAATTTTTTTACAAATGGTATATGGATGATTGTTTATTAGACATGGGAAGATGTTGAGAAGGTAATGGAAGAGAATCAAACCAAAGGGGTGACTGCATGGTTAGAAGCTATAGCATATGTGATGTTGGGAATTACTATGTTGTCACTTCTTGCGGAACCTCTAATAGCAAGTGTTCAAAAATTCTCTGAAGCTGCAGGAATTTCTTCATTTTTCATCTCTTTCATTTTAGTCCCTTTGGCTACAAATTTTAGAGAAGCAACATCAGCAATCAAAGAAGCCAGCCACAAAAAAAGTAGTAATACTTCTCACACAATGTATGAGGTTAGTCATGTTCCTCTCTCAGTCCACTACAATATATATGAGATTTAGTAATATTTGAAAAATGTTACTAAGTATAAAAAAAAATGTTACTATTTAAATTTAGTAATATTTGATAAGTGTTAGCTAAAGCCTATGTTGCTAAATGGTTTTAGAAACACTTGAGAGTATTTTCAGTAACATTTAAAAAATGATATATGTTTAGTAGTTGAATCTGCTTGCATAAATATTTCTAAATAGTGAAATAACTAGTTTAGATCAATCACTAAAAAATTAAGATATGTGATTTCAAAGATTGCAACAAGCTAAAATTGACTGATGATGAAAATAACAAATACATTGTTTATCAGTAGAAATAACTTCTTCACTATTTTATCCTTGGTTTATATACTCCTAGGATCCCTATATTATTTGAATATTTTTAAATAGGTTTTATAAATATAAAAAAATTAAGTTCTTAAAATTATCAATAATTTATAAATAGCTCTTTAAACTAAAATTGTTTTTAATTGGATCCTTGATTGTTTATAATTTCATCTCTAAACTTTTAAGTAATTTATATTTGAATCCTTAAACTCTAATCTAATTACAAATCATTTGAAAATTGATGACTCAATGAAAAGAAAATATAGTTCAAGGACCTAATTACGATTTTTCAGTTTAGAGACTTATTTATAAATCCTCAAATAATTTGAAGGTTTCTATAGTTATTAAAAATTAGTCTAATAAATACTTATGTAAAGATTTGAGTCAATGCAGATTTATGGAGCAGTGTTTATGAACAACATTCTTGGCTTTGTGGTGATATCTATTCTTATATATATGAGAGATATCACTTGGGAATTTTCAGCGGATGTACTGGTGGTGGCAATTGTTTGTATTGTGATGGGTCTCACCACTAGTTTTCGTTCCACTTTTCCTCTGTGGACATCCTTCCCAACATACCTCTTGTATCTAATATCATTGGTTATGGTTTTTGTTCTTAAAGATGTTCTCAATTACATGTAA
Protein sequence

>MS.gene062586.t1

MRNITKIACFNILFLSIIALHVQCRFLPNKLISNGVDDVQSEEDSYLLLNNDNDKGVVIESSSNPEEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIVGKQSFKNDSHSSDTSYSSNGRIKQALTGYGITMDIDTRKMARIMVFSVIPLLIMQIPTLFSFSTTLRNVTLIVSLIIAVTFLISYFIYQLFKPQIEKTRLEYIKHDDLILRIFQRVEKQTLQKILAEDGTPNVAAINGLYHEFSQHGGKHLSTSEVKELLLGNNLADTNIREDQIADMLKAFDKNGDQIITKEEFVSGLTEYINQTKHALDRKYLPKESMNKMYQTFIKPWIEHVRKERELKGHLISGVLSHAQNDMVGRMLNDDGTPDKDAIKRLFEQVDGDGDNHVSRSELEKVVRETHFGKAVDAEEAVSKLLHDLDANKDNEISENEFVDGFTKWINSNSSKAGSSKSSSHGTHQTWEDVEKVMEENQTKGVTAWLEAIAYVMLGITMLSLLAEPLIASVQKFSEAAGISSFFISFILVPLATNFREATSAIKEASHKKSSNTSHTMYEIYGAVFMNNILGFVVISILIYMRDITWEFSADVLVVAIVCIVMGLTTSFRSTFPLWTSFPTYLLYLISLVMVFVLKDVLNYM