Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060666.t1 | XP_024632265.1 | 96.6 | 712 | 23 | 1 | 1 | 712 | 1 | 711 | 0.00E+00 | 1279.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060666.t1 | Q8L636 | 33.5 | 701 | 330 | 11 | 11 | 705 | 8 | 578 | 1.6e-89 | 332.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060666.t1 | A0A396JA21 | 96.6 | 712 | 23 | 1 | 1 | 712 | 1 | 711 | 0.0e+00 | 1279.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051113 | MS.gene060666 | -0.812903 | 3.35E-51 | -1.69E-46 |
MS.gene059749 | MS.gene060666 | 0.926332 | 5.43E-91 | -1.69E-46 |
MS.gene060666 | MS.gene062586 | 0.964064 | 7.37E-123 | -1.69E-46 |
MS.gene060666 | MS.gene072324 | -0.80557 | 1.25E-49 | -1.69E-46 |
MS.gene060666 | MS.gene25651 | 0.816073 | 6.67E-52 | -1.69E-46 |
MS.gene060666 | MS.gene58383 | 0.912793 | 1.30E-83 | -1.69E-46 |
MS.gene060666 | MS.gene61305 | -0.813223 | 2.85E-51 | -1.69E-46 |
MS.gene060666 | MS.gene66800 | 0.836653 | 8.25E-57 | -1.69E-46 |
MS.gene060666 | MS.gene71972 | -0.81551 | 8.91E-52 | -1.69E-46 |
MS.gene060666 | MS.gene82008 | 0.806602 | 7.60E-50 | -1.69E-46 |
MS.gene060666 | MS.gene90907 | 0.803052 | 4.19E-49 | -1.69E-46 |
MS.gene060666 | MS.gene91316 | -0.831939 | 1.26E-55 | -1.69E-46 |
MS.gene060666 | MS.gene95748 | 0.814488 | 1.50E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060666.t1 | MTR_2g078350 | 81.489 | 497 | 89 | 2 | 136 | 631 | 1 | 495 | 0.0 | 808 |
MS.gene060666.t1 | MTR_2g078340 | 95.745 | 376 | 15 | 1 | 266 | 641 | 2 | 376 | 0.0 | 734 |
MS.gene060666.t1 | MTR_2g078240 | 39.628 | 323 | 177 | 7 | 400 | 705 | 115 | 436 | 1.43e-67 | 229 |
MS.gene060666.t1 | MTR_2g078240 | 32.432 | 185 | 123 | 2 | 203 | 386 | 55 | 238 | 1.74e-31 | 128 |
MS.gene060666.t1 | MTR_2g078250 | 35.878 | 131 | 61 | 2 | 10 | 137 | 21 | 131 | 1.33e-21 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060666.t1 | AT1G53210 | 35.990 | 414 | 244 | 7 | 29 | 441 | 31 | 424 | 3.19e-81 | 270 |
MS.gene060666.t1 | AT1G53210 | 39.144 | 327 | 175 | 4 | 400 | 705 | 255 | 578 | 1.70e-61 | 216 |
MS.gene060666.t1 | AT1G29020 | 33.115 | 305 | 182 | 8 | 409 | 703 | 256 | 548 | 7.97e-43 | 164 |
MS.gene060666.t1 | AT1G29020 | 26.098 | 387 | 241 | 10 | 22 | 395 | 20 | 374 | 2.18e-34 | 139 |
MS.gene060666.t1 | AT1G29020 | 33.115 | 305 | 182 | 8 | 409 | 703 | 289 | 581 | 1.43e-42 | 163 |
MS.gene060666.t1 | AT1G29020 | 25.061 | 407 | 253 | 10 | 22 | 395 | 20 | 407 | 1.02e-33 | 137 |
MS.gene060666.t1 | AT1G29025 | 28.165 | 387 | 240 | 10 | 22 | 388 | 19 | 387 | 4.21e-36 | 144 |
MS.gene060666.t1 | AT1G29025 | 32.581 | 310 | 184 | 7 | 410 | 704 | 271 | 570 | 4.84e-36 | 144 |
MS.gene060666.t1 | AT2G34020 | 28.701 | 331 | 213 | 6 | 396 | 704 | 273 | 602 | 9.40e-36 | 143 |
MS.gene060666.t1 | AT2G34020 | 25.700 | 393 | 255 | 10 | 29 | 403 | 46 | 419 | 2.20e-33 | 136 |
MS.gene060666.t1 | AT2G34030 | 29.560 | 318 | 207 | 7 | 404 | 710 | 253 | 564 | 4.31e-32 | 132 |
MS.gene060666.t1 | AT2G34030 | 24.515 | 412 | 275 | 11 | 10 | 407 | 8 | 397 | 1.40e-27 | 118 |
MS.gene060666.t1 | AT2G34020 | 29.520 | 271 | 172 | 4 | 453 | 704 | 365 | 635 | 2.63e-31 | 130 |
MS.gene060666.t1 | AT2G34020 | 24.706 | 425 | 252 | 13 | 29 | 403 | 46 | 452 | 1.83e-28 | 121 |
Find 129 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTCATTTATTTCTGATTT+TGG | 0.111752 | 2.2:-16332009 | MS.gene060666:CDS |
TTTGAGTCAATGCAGATTTA+TGG | 0.122278 | 2.2:-16325913 | MS.gene060666:intron |
TCCATTGGAAATCAATTTAT+TGG | 0.127818 | 2.2:+16332175 | None:intergenic |
CCTAATGTAGCTGCCATAAA+TGG | 0.132670 | 2.2:-16329498 | MS.gene060666:CDS |
CCTGAATCCTTAATTCTTCT+TGG | 0.168153 | 2.2:-16331867 | MS.gene060666:intron |
CCATGTTCTAATAACATTCT+TGG | 0.194031 | 2.2:-16332029 | MS.gene060666:CDS |
AAATCTGACTCACCCATTTA+TGG | 0.207244 | 2.2:+16329485 | None:intergenic |
ATTCCATGGAGAATCATATT+TGG | 0.230860 | 2.2:-16331970 | MS.gene060666:CDS |
ATTCTTCTTTGGTTATAATT+TGG | 0.231142 | 2.2:+16328524 | None:intergenic |
CCCCATGTTGACTGAATTCA+TGG | 0.236145 | 2.2:+16328665 | None:intergenic |
GCCACTAACAAATTCTTCTT+TGG | 0.253466 | 2.2:+16328513 | None:intergenic |
ACTAATTTCGTTGTCTTTGT+TGG | 0.293705 | 2.2:+16327429 | None:intergenic |
GAACAAATCTTCAAGATTCT+TGG | 0.301871 | 2.2:-16331936 | MS.gene060666:CDS |
AGCAATACCAAGAAGAATTA+AGG | 0.303063 | 2.2:+16331860 | None:intergenic |
GTATCTGATATCATTGGTTA+TGG | 0.316315 | 2.2:-16325707 | MS.gene060666:CDS |
CCATTTATGGCAGCTACATT+AGG | 0.318327 | 2.2:+16329498 | None:intergenic |
GATAGGTTATGGCATTACTA+TGG | 0.332693 | 2.2:-16330214 | MS.gene060666:intron |
CCAAGAAGAATTAAGGATTC+AGG | 0.344838 | 2.2:+16331867 | None:intergenic |
AGAATTTGAGTTTATCCATT+TGG | 0.348639 | 2.2:+16327381 | None:intergenic |
CCATTGGAAATCAATTTATT+GGG | 0.359879 | 2.2:+16332176 | None:intergenic |
ATCTATGAACAAAATGTATC+AGG | 0.369645 | 2.2:-16328431 | MS.gene060666:intron |
GTGTTTATGAACAACATTCT+TGG | 0.370916 | 2.2:-16325886 | MS.gene060666:CDS |
ACCAAAGAAGAATTTGTTAG+TGG | 0.372618 | 2.2:-16328514 | MS.gene060666:CDS |
AGTGAGAATGAATTTGTTGA+TGG | 0.378891 | 2.2:-16327409 | MS.gene060666:CDS |
TATCCAAAGCATGCTTTGTC+TGG | 0.380009 | 2.2:+16328473 | None:intergenic |
TAACCATGCAGTCACCCCTT+TGG | 0.396965 | 2.2:+16326895 | None:intergenic |
TCTTCCATTTGATGAATATG+AGG | 0.402559 | 2.2:+16330706 | None:intergenic |
GGCAATTGTTTGTATTGTGA+TGG | 0.409059 | 2.2:-16325791 | MS.gene060666:CDS |
AGGTTATTCGAGCAAGTTGA+TGG | 0.409987 | 2.2:-16327568 | MS.gene060666:CDS |
GAGTATTGTAAGCAAATGTA+TGG | 0.415952 | 2.2:-16332059 | MS.gene060666:CDS |
TAACCAGACAAAGCATGCTT+TGG | 0.418050 | 2.2:-16328476 | MS.gene060666:CDS |
CCTCTTGTATCTGATATCAT+TGG | 0.420016 | 2.2:-16325713 | MS.gene060666:CDS |
GAAGTAAAAGAGTTGTTGCT+TGG | 0.423281 | 2.2:-16328622 | MS.gene060666:CDS |
ACTGGAGTTGGATTGTTAGC+TGG | 0.429890 | 2.2:-16330818 | MS.gene060666:CDS |
AAGTCATGCTCAGAATGATA+TGG | 0.431658 | 2.2:-16327739 | MS.gene060666:CDS |
TTGTTGATGGCTTCACCAAA+TGG | 0.432286 | 2.2:-16327396 | MS.gene060666:CDS |
ATCAGATACAAGAGGTATGT+TGG | 0.441324 | 2.2:+16325721 | None:intergenic |
GAACAACATTCTTGGCTTTG+TGG | 0.441869 | 2.2:-16325878 | MS.gene060666:CDS |
CCCAATAAATTGATTTCCAA+TGG | 0.444689 | 2.2:-16332176 | MS.gene060666:CDS |
GATACCTCATATTCATCAAA+TGG | 0.449371 | 2.2:-16330710 | MS.gene060666:CDS |
CACTGGACTTTCAAGTGATA+AGG | 0.450927 | 2.2:-16330864 | MS.gene060666:CDS |
CTGAAGGGACATCTTATCTC+TGG | 0.453770 | 2.2:-16327768 | MS.gene060666:CDS |
TATGAGTACTTGTTATTCCA+TGG | 0.456039 | 2.2:-16331984 | MS.gene060666:CDS |
TTTCTCACGTGTTCAATCCA+TGG | 0.456370 | 2.2:+16327801 | None:intergenic |
TCAATTTATTGGGAAGAAAA+CGG | 0.458579 | 2.2:+16332186 | None:intergenic |
TGGAAGAGAATCAAACCAAA+GGG | 0.459663 | 2.2:-16326910 | MS.gene060666:CDS |
CCTGCTTCTCACAGTTGTGT+GGG | 0.461639 | 2.2:-16330786 | MS.gene060666:CDS |
GCCATAGCATATGTGATGTT+GGG | 0.464181 | 2.2:-16326869 | MS.gene060666:CDS |
GTCCTCTCTGATATTTGTGT+CGG | 0.465420 | 2.2:+16328588 | None:intergenic |
AGCTCAAAATCTTCTTCTCA+TGG | 0.466725 | 2.2:-16327346 | MS.gene060666:CDS |
CATCTCATACTTCATTTACC+AGG | 0.467416 | 2.2:-16330046 | MS.gene060666:intron |
CTAATGTAGCTGCCATAAAT+GGG | 0.468804 | 2.2:-16329497 | MS.gene060666:intron |
TTAACAATGATAATGACAAA+GGG | 0.469135 | 2.2:-16332112 | MS.gene060666:CDS |
GTAGTGAGGGAGACTCATTT+TGG | 0.469435 | 2.2:-16327505 | MS.gene060666:CDS |
ATTTGCTTACAATACTCCTC+TGG | 0.470597 | 2.2:+16332065 | None:intergenic |
AACTCAAATTCTAGTAAAGC+AGG | 0.473066 | 2.2:-16327370 | MS.gene060666:CDS |
AGAATAAAACAAGCTTTGAC+TGG | 0.476703 | 2.2:-16330686 | MS.gene060666:intron |
AAGTAAAAGAGTTGTTGCTT+GGG | 0.476825 | 2.2:-16328621 | MS.gene060666:CDS |
CTCTAAAATTTGTAGCCAAA+GGG | 0.478062 | 2.2:+16326744 | None:intergenic |
GCAATTGTTTGTATTGTGAT+GGG | 0.481583 | 2.2:-16325790 | MS.gene060666:CDS |
TCAGATACAAGAGGTATGTT+GGG | 0.484057 | 2.2:+16325722 | None:intergenic |
ATCTTCAAGATTCTTGGTCC+AGG | 0.484678 | 2.2:-16331930 | MS.gene060666:CDS |
GGAGAATCATATTTGGCTGC+TGG | 0.485636 | 2.2:-16331963 | MS.gene060666:CDS |
TCTCTAAAATTTGTAGCCAA+AGG | 0.487209 | 2.2:+16326743 | None:intergenic |
AGCCATAGCATATGTGATGT+TGG | 0.487880 | 2.2:-16326870 | MS.gene060666:CDS |
TCCTGCTTCTCACAGTTGTG+TGG | 0.499987 | 2.2:-16330787 | MS.gene060666:CDS |
TAGAAAGATGGCAAGAATCA+TGG | 0.500404 | 2.2:-16330181 | MS.gene060666:CDS |
CCCACACAACTGTGAGAAGC+AGG | 0.506345 | 2.2:+16330786 | None:intergenic |
GAGTATGCTTCCACTGGAGT+TGG | 0.510075 | 2.2:-16330830 | MS.gene060666:CDS |
CCTCACTACTTTCTCTAACT+CGG | 0.512226 | 2.2:+16327519 | None:intergenic |
CTGATAAAGATGCTATCAAA+AGG | 0.515493 | 2.2:-16327686 | MS.gene060666:intron |
CTGCTTCTCACAGTTGTGTG+GGG | 0.517244 | 2.2:-16330785 | MS.gene060666:CDS |
GAGTAGGAATCTGCATTATG+AGG | 0.520550 | 2.2:+16330139 | None:intergenic |
TTGAACATCATCAACTCCAT+TGG | 0.520575 | 2.2:+16332160 | None:intergenic |
GAGAAAAGAACGTGAACTGA+AGG | 0.526065 | 2.2:-16327784 | MS.gene060666:CDS |
GGAAGATGTTGAGAAGGTAA+TGG | 0.527786 | 2.2:-16326930 | MS.gene060666:CDS |
CAAAAGATCCTAGCTGAGGA+TGG | 0.534878 | 2.2:-16329525 | MS.gene060666:CDS |
GCGCAAGAGTATGCTTCCAC+TGG | 0.540034 | 2.2:-16330836 | MS.gene060666:CDS |
TACTTCTCACACAATGTATG+AGG | 0.540505 | 2.2:-16326675 | MS.gene060666:intron |
GGATGTCCACAGAGGAAAAG+TGG | 0.542719 | 2.2:+16325747 | None:intergenic |
GTAGAGAAAGAGAACAGAGT+AGG | 0.543401 | 2.2:+16330123 | None:intergenic |
AAACCAAAGGGGTGACTGCA+TGG | 0.544322 | 2.2:-16326898 | MS.gene060666:CDS |
TACCATGAATTCAGTCAACA+TGG | 0.550517 | 2.2:-16328667 | MS.gene060666:CDS |
TTCGAGCAAGTTGATGGCGA+TGG | 0.551497 | 2.2:-16327562 | MS.gene060666:CDS |
CGAGTTAGAGAAAGTAGTGA+GGG | 0.552437 | 2.2:-16327518 | MS.gene060666:CDS |
CTTAACAATGATAATGACAA+AGG | 0.552648 | 2.2:-16332113 | MS.gene060666:CDS |
GCTAGCTTCTTTGATTGCTG+AGG | 0.553027 | 2.2:+16326715 | None:intergenic |
TCCCAACATCACATATGCTA+TGG | 0.553481 | 2.2:+16326868 | None:intergenic |
TATATATGAGAGATATCACT+TGG | 0.563447 | 2.2:-16325840 | MS.gene060666:CDS |
ATACAAGAGGTATGTTGGGA+AGG | 0.566464 | 2.2:+16325726 | None:intergenic |
GGATATAGACACTAGAAAGA+TGG | 0.566650 | 2.2:-16330193 | MS.gene060666:CDS |
TTCAGCTGATGTATTGGTGG+TGG | 0.569076 | 2.2:-16325812 | MS.gene060666:CDS |
CTAACTCGGATCTTGAAACA+TGG | 0.570677 | 2.2:+16327533 | None:intergenic |
TAGGAGTTCCATCCTCAGCT+AGG | 0.570837 | 2.2:+16329517 | None:intergenic |
CAGCCAAATATGATTCTCCA+TGG | 0.571361 | 2.2:+16331967 | None:intergenic |
CCAAGAATGTTATTAGAACA+TGG | 0.576847 | 2.2:+16332029 | None:intergenic |
AATGATGAGAGAAACTATCA+AGG | 0.581313 | 2.2:+16330083 | None:intergenic |
TGCTTCTCACAGTTGTGTGG+GGG | 0.582840 | 2.2:-16330784 | MS.gene060666:CDS |
CCGAGTTAGAGAAAGTAGTG+AGG | 0.583038 | 2.2:-16327519 | MS.gene060666:CDS |
AGTATTGTAAGCAAATGTAT+GGG | 0.584033 | 2.2:-16332058 | MS.gene060666:CDS |
GGATAGAAAGTACCTCCCTA+AGG | 0.588674 | 2.2:-16328455 | MS.gene060666:CDS |
GGTAGGATGCTCAATGATGA+TGG | 0.588759 | 2.2:-16327714 | MS.gene060666:CDS |
TGAATCTTCTTCTAATCCAG+AGG | 0.591703 | 2.2:-16332081 | MS.gene060666:CDS |
GAAGAATTAAGGATTCAGGA+AGG | 0.595239 | 2.2:+16331871 | None:intergenic |
GACATGGGAAGATGTTGAGA+AGG | 0.598738 | 2.2:-16326936 | MS.gene060666:CDS |
GGAATCTGCATTATGAGGAG+TGG | 0.600129 | 2.2:+16330144 | None:intergenic |
ACCATGAATTCAGTCAACAT+GGG | 0.600741 | 2.2:-16328666 | MS.gene060666:CDS |
AAGAATTAAGGATTCAGGAA+GGG | 0.601558 | 2.2:+16331872 | None:intergenic |
TGGTAAGGCTGTAGATGCAG+AGG | 0.605117 | 2.2:-16327485 | MS.gene060666:CDS |
TGTTGGCATCAAGATCATGA+AGG | 0.608130 | 2.2:+16327446 | None:intergenic |
ATGGAAGAGAATCAAACCAA+AGG | 0.619841 | 2.2:-16326911 | MS.gene060666:CDS |
CATGCTCAGAATGATATGGT+TGG | 0.620806 | 2.2:-16327735 | MS.gene060666:CDS |
CACAACTGTGAGAAGCAGGA+TGG | 0.623998 | 2.2:+16330790 | None:intergenic |
CCATGAATTCAGTCAACATG+GGG | 0.624062 | 2.2:-16328665 | MS.gene060666:CDS |
AGAAAAGAACGTGAACTGAA+GGG | 0.629208 | 2.2:-16327783 | MS.gene060666:CDS |
AGCTAACAATCCAACTCCAG+TGG | 0.632470 | 2.2:+16330820 | None:intergenic |
TGTTCATAGATTCCTTAGGG+AGG | 0.638172 | 2.2:+16328443 | None:intergenic |
TTGCTTGCCAACAATAACAC+AGG | 0.646292 | 2.2:+16330760 | None:intergenic |
TAACAATGATAATGACAAAG+GGG | 0.649728 | 2.2:-16332111 | MS.gene060666:CDS |
CTCAGAATGATATGGTTGGT+AGG | 0.657908 | 2.2:-16327731 | MS.gene060666:CDS |
TCTACAAAAGATCCTAGCTG+AGG | 0.670159 | 2.2:-16329529 | MS.gene060666:CDS |
GAATCATATTTGGCTGCTGG+AGG | 0.671094 | 2.2:-16331960 | MS.gene060666:CDS |
AAAAGTGGAACGAAAACTAG+TGG | 0.676799 | 2.2:+16325762 | None:intergenic |
CCAATGATATCAGATACAAG+AGG | 0.705154 | 2.2:+16325713 | None:intergenic |
GGAAGAGAATCAAACCAAAG+GGG | 0.710553 | 2.2:-16326909 | MS.gene060666:CDS |
ATATATGAGAGATATCACTT+GGG | 0.731670 | 2.2:-16325839 | MS.gene060666:CDS |
AGCCGACACAAATATCAGAG+AGG | 0.740662 | 2.2:-16328590 | MS.gene060666:CDS |
CATGAATTCAGTCAACATGG+GGG | 0.753325 | 2.2:-16328664 | MS.gene060666:CDS |
GTTGGGAAGGATGTCCACAG+AGG | 0.762076 | 2.2:+16325739 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTATAATTTAAAAAA+GGG | + | chr2.2:16330681-16330700 | None:intergenic | 0.0% |
!!! | TATATTTTATAATTTAAAAA+AGG | + | chr2.2:16330682-16330701 | None:intergenic | 0.0% |
!! | AATTGAGTAATTAATTTATA+TGG | + | chr2.2:16328207-16328226 | None:intergenic | 10.0% |
!! | CATAAAAAAAAAAAATTACA+AGG | + | chr2.2:16326552-16326571 | None:intergenic | 10.0% |
!! | TCAAATAAAAAAAACTATAA+AGG | + | chr2.2:16327651-16327670 | None:intergenic | 10.0% |
!!! | AAAATTGTCATTTTTTTAAT+AGG | - | chr2.2:16328903-16328922 | MS.gene060666:intron | 10.0% |
!!! | AAACTAAAATTGTTTTTAAT+TGG | - | chr2.2:16331762-16331781 | MS.gene060666:intron | 10.0% |
!!! | AAATTGTCATTTTTTTAATA+GGG | - | chr2.2:16328904-16328923 | MS.gene060666:intron | 10.0% |
!!! | AATAACAATTTTTTTACAAA+TGG | - | chr2.2:16330949-16330968 | MS.gene060666:intron | 10.0% |
!!! | TATTAAAAAAATGACAATTT+TGG | + | chr2.2:16328904-16328923 | None:intergenic | 10.0% |
!!! | TCTCAAAATTTTAAAATTTA+GGG | - | chr2.2:16330839-16330858 | MS.gene060666:CDS | 10.0% |
!!! | TTCTCAAAATTTTAAAATTT+AGG | - | chr2.2:16330838-16330857 | MS.gene060666:CDS | 10.0% |
!! | AAAAATTCACATTAAATTTC+AGG | - | chr2.2:16330728-16330747 | MS.gene060666:CDS | 15.0% |
!! | AAAACATTTATATATACTGT+CGG | + | chr2.2:16330299-16330318 | None:intergenic | 15.0% |
!! | AAATTACTATATTGTATAGT+TGG | + | chr2.2:16328162-16328181 | None:intergenic | 15.0% |
!! | AACTATACAATATAGTAATT+TGG | - | chr2.2:16328161-16328180 | MS.gene060666:intron | 15.0% |
!! | ACTTATATTATAAGCAATAT+AGG | - | chr2.2:16329177-16329196 | MS.gene060666:intron | 15.0% |
!! | ATCCATTATAAAAATATAAC+CGG | - | chr2.2:16326395-16326414 | MS.gene060666:intron | 15.0% |
!! | TATATTGCTTATAATATAAG+TGG | + | chr2.2:16329178-16329197 | None:intergenic | 15.0% |
!! | TATTAATTAAATGACACTAA+TGG | - | chr2.2:16328983-16329002 | MS.gene060666:intron | 15.0% |
!! | TTAAAATTTATGATAGGTTA+TGG | - | chr2.2:16327704-16327723 | MS.gene060666:CDS | 15.0% |
!! | TTTATAATTTAAAAAAGGGA+AGG | + | chr2.2:16330677-16330696 | None:intergenic | 15.0% |
!! | TTTCATAAATTTCACAAATT+GGG | + | chr2.2:16330708-16330727 | None:intergenic | 15.0% |
!!! | AATAAATAAGGGTATAATAA+TGG | - | chr2.2:16329800-16329819 | MS.gene060666:intron | 15.0% |
!!! | AATTGTCATTTTTTTAATAG+GGG | - | chr2.2:16328905-16328924 | MS.gene060666:intron | 15.0% |
!!! | AGAAAAACCAATTTTAAATT+CGG | + | chr2.2:16326437-16326456 | None:intergenic | 15.0% |
!!! | ATACACATTTTTTTTTTTAG+AGG | - | chr2.2:16326924-16326943 | MS.gene060666:CDS | 15.0% |
!!! | ATTTTTTTACAAATGGTATA+TGG | - | chr2.2:16330956-16330975 | MS.gene060666:intron | 15.0% |
!!! | TAAAAAAATCTATTCTAGTT+TGG | + | chr2.2:16326764-16326783 | None:intergenic | 15.0% |
!!! | TTATAAACCGAATTTAAAAT+TGG | - | chr2.2:16326427-16326446 | MS.gene060666:intron | 15.0% |
!!! | TTCTTTGATTTAATATTTGA+TGG | + | chr2.2:16326809-16326828 | None:intergenic | 15.0% |
!!! | TTTGTAAACCTTAATATTTT+AGG | - | chr2.2:16328013-16328032 | MS.gene060666:intron | 15.0% |
!!! | TTTTCATAAATTTCACAAAT+TGG | + | chr2.2:16330709-16330728 | None:intergenic | 15.0% |
!! | AAAAAACTATAAAGGAGTTA+AGG | + | chr2.2:16327643-16327662 | None:intergenic | 20.0% |
!! | AAACATAATAAATGTTGCAT+TGG | - | chr2.2:16329825-16329844 | MS.gene060666:intron | 20.0% |
!! | AAATCTCATATATATTGTAG+TGG | + | chr2.2:16331302-16331321 | None:intergenic | 20.0% |
!! | AAATGAAGAGAAAAAAAAGA+AGG | + | chr2.2:16326608-16326627 | None:intergenic | 20.0% |
!! | AACTTGGTTGTATATTATAA+TGG | + | chr2.2:16327978-16327997 | None:intergenic | 20.0% |
!! | AAGTTTCAAATTCTTCAATT+AGG | - | chr2.2:16327613-16327632 | MS.gene060666:intron | 20.0% |
!! | AATAATCTGAAAACAACATA+TGG | + | chr2.2:16328587-16328606 | None:intergenic | 20.0% |
!! | AATATTTCTCAACTGATTAA+AGG | - | chr2.2:16328472-16328491 | MS.gene060666:CDS | 20.0% |
!! | AGATTAACTTAAATGCAAAT+AGG | + | chr2.2:16327926-16327945 | None:intergenic | 20.0% |
!! | AGTTATTGAATAAAGGAATA+AGG | + | chr2.2:16330626-16330645 | None:intergenic | 20.0% |
!! | ATATACAACCAAGTTTAAAA+TGG | - | chr2.2:16327983-16328002 | MS.gene060666:intron | 20.0% |
!! | ATCATATTTCTCTTATGTTA+GGG | + | chr2.2:16328790-16328809 | None:intergenic | 20.0% |
!! | ATTCTTCTTTGGTTATAATT+TGG | + | chr2.2:16329408-16329427 | None:intergenic | 20.0% |
!! | GATGAAATTATAAACAATCA+AGG | + | chr2.2:16331790-16331809 | None:intergenic | 20.0% |
!! | GGATGAAATTCAATAAATAA+GGG | - | chr2.2:16329789-16329808 | MS.gene060666:intron | 20.0% |
!! | GTTATTGAATAAAGGAATAA+GGG | + | chr2.2:16330625-16330644 | None:intergenic | 20.0% |
!! | TAAACTGAAAAATCGTAATT+AGG | + | chr2.2:16331915-16331934 | None:intergenic | 20.0% |
!! | TAAATCCTCAAATAATTTGA+AGG | - | chr2.2:16331947-16331966 | MS.gene060666:CDS | 20.0% |
!! | TAAATGAGTCAAAAATTAAG+TGG | - | chr2.2:16330805-16330824 | MS.gene060666:CDS | 20.0% |
!! | TAATAGTTATCACTTCTTTA+AGG | - | chr2.2:16328638-16328657 | MS.gene060666:CDS | 20.0% |
!! | TATTCCTTTATTCAATAACT+TGG | - | chr2.2:16330626-16330645 | MS.gene060666:intron | 20.0% |
!! | TGAAAAGAAAATATAGTTCA+AGG | - | chr2.2:16331888-16331907 | MS.gene060666:CDS | 20.0% |
!! | TGGATGAAATTCAATAAATA+AGG | - | chr2.2:16329788-16329807 | MS.gene060666:intron | 20.0% |
!! | TGTAATTAGATTAGAGTTTA+AGG | + | chr2.2:16331843-16331862 | None:intergenic | 20.0% |
!! | TTCATAAATTTCACAAATTG+GGG | + | chr2.2:16330707-16330726 | None:intergenic | 20.0% |
!! | TTGAATTACCACTAAAATAA+AGG | - | chr2.2:16326701-16326720 | MS.gene060666:CDS | 20.0% |
!!! | AACCGGTTATATTTTTATAA+TGG | + | chr2.2:16326400-16326419 | None:intergenic | 20.0% |
!!! | AAGAATACCTCTTTTTTTTA+AGG | - | chr2.2:16326824-16326843 | MS.gene060666:CDS | 20.0% |
!!! | AAGTATTACTACTTTTTTTG+TGG | + | chr2.2:16331239-16331258 | None:intergenic | 20.0% |
!!! | AATGGATTTTTTTATAAACC+TGG | + | chr2.2:16326382-16326401 | None:intergenic | 20.0% |
!!! | ACAATATAGTAATTTGGAAT+TGG | - | chr2.2:16328167-16328186 | MS.gene060666:intron | 20.0% |
!!! | AGAATACCTCTTTTTTTTAA+GGG | - | chr2.2:16326825-16326844 | MS.gene060666:CDS | 20.0% |
!!! | ATTGCAACATTTTAAAACTT+AGG | + | chr2.2:16328700-16328719 | None:intergenic | 20.0% |
!!! | ATTGTCATTTTTTTAATAGG+GGG | - | chr2.2:16328906-16328925 | MS.gene060666:intron | 20.0% |
!!! | CAATATAGTAATTTGGAATT+GGG | - | chr2.2:16328168-16328187 | MS.gene060666:intron | 20.0% |
!!! | GTGTCATTTAATTAATAACA+AGG | + | chr2.2:16328980-16328999 | None:intergenic | 20.0% |
!!! | GTTTTAAAATGTTGCAATTT+TGG | - | chr2.2:16328702-16328721 | MS.gene060666:intron | 20.0% |
!!! | TAAAAAAATGACAATTTTGG+CGG | + | chr2.2:16328901-16328920 | None:intergenic | 20.0% |
!!! | TTAAAAGCTTTTGACAAAAA+TGG | - | chr2.2:16329379-16329398 | MS.gene060666:intron | 20.0% |
!!! | TTAACAATGATAATGACAAA+GGG | - | chr2.2:16325817-16325836 | MS.gene060666:CDS | 20.0% |
!!! | TTCTAAAAAAGTTGCAATTA+TGG | - | chr2.2:16328826-16328845 | MS.gene060666:intron | 20.0% |
!!! | TTGCAACATTTTAAAACTTA+GGG | + | chr2.2:16328699-16328718 | None:intergenic | 20.0% |
!!! | TTTGCCATTTTTTTAATAGA+AGG | + | chr2.2:16328728-16328747 | None:intergenic | 20.0% |
! | ACTATTATCATAAACTATCC+TGG | + | chr2.2:16328625-16328644 | None:intergenic | 25.0% |
! | AGAAACCTTCAAATTATTTG+AGG | + | chr2.2:16331955-16331974 | None:intergenic | 25.0% |
! | AGTATTGTAAGCAAATGTAT+GGG | - | chr2.2:16325871-16325890 | MS.gene060666:CDS | 25.0% |
! | ATAAAATCAATTTCTCCATG+AGG | + | chr2.2:16329090-16329109 | None:intergenic | 25.0% |
! | ATATATGAGAGATATCACTT+GGG | - | chr2.2:16332090-16332109 | MS.gene060666:CDS | 25.0% |
! | ATCTATGAACAAAATGTATC+AGG | - | chr2.2:16329498-16329517 | MS.gene060666:CDS | 25.0% |
! | CATTCTCAAATTTAGAAACA+TGG | - | chr2.2:16330866-16330885 | MS.gene060666:CDS | 25.0% |
! | CCACTAACTACATTTAATAA+GGG | + | chr2.2:16329757-16329776 | None:intergenic | 25.0% |
! | CCATTGGAAATCAATTTATT+GGG | + | chr2.2:16325756-16325775 | None:intergenic | 25.0% |
! | GACATTTAGCATGTAAAATA+TGG | + | chr2.2:16326732-16326751 | None:intergenic | 25.0% |
! | GATCATATTTCTCTTATGTT+AGG | + | chr2.2:16328791-16328810 | None:intergenic | 25.0% |
! | GATGATTGTTTATTAGACAT+GGG | - | chr2.2:16330978-16330997 | MS.gene060666:intron | 25.0% |
! | GATTTCAATGGTAAAATTAG+TGG | - | chr2.2:16329717-16329736 | MS.gene060666:intron | 25.0% |
! | TAACATATAACAATCATGTC+AGG | + | chr2.2:16329543-16329562 | None:intergenic | 25.0% |
! | TATATATGAGAGATATCACT+TGG | - | chr2.2:16332089-16332108 | MS.gene060666:CDS | 25.0% |
! | TATGCCAAGTTATTGAATAA+AGG | + | chr2.2:16330633-16330652 | None:intergenic | 25.0% |
! | TCAATTTATTGGGAAGAAAA+CGG | + | chr2.2:16325746-16325765 | None:intergenic | 25.0% |
! | TCATATTTCTCTTATGTTAG+GGG | + | chr2.2:16328789-16328808 | None:intergenic | 25.0% |
! | TCCACTAACTACATTTAATA+AGG | + | chr2.2:16329758-16329777 | None:intergenic | 25.0% |
! | TCCATTGGAAATCAATTTAT+TGG | + | chr2.2:16325757-16325776 | None:intergenic | 25.0% |
! | TCTGATATATACAGTTAAGA+GGG | + | chr2.2:16326901-16326920 | None:intergenic | 25.0% |
! | TGCGATTTCCTAAAATATTA+AGG | + | chr2.2:16328024-16328043 | None:intergenic | 25.0% |
! | TTAAGGGAATCAAATAATAG+TGG | - | chr2.2:16326841-16326860 | MS.gene060666:CDS | 25.0% |
! | TTATGTACGTAGAAAACTAT+GGG | + | chr2.2:16329213-16329232 | None:intergenic | 25.0% |
! | TTGATTCCCTTAAAAAAAAG+AGG | + | chr2.2:16326834-16326853 | None:intergenic | 25.0% |
!! | AAATTGAACTTCTTTTCTTG+AGG | - | chr2.2:16329031-16329050 | MS.gene060666:intron | 25.0% |
!! | AACAACTTCCATTTTAAACT+TGG | + | chr2.2:16327994-16328013 | None:intergenic | 25.0% |
!! | AATAAGTTGAAAACAACTGA+TGG | - | chr2.2:16329990-16330009 | MS.gene060666:intron | 25.0% |
!! | AGAATTTGAGTTTATCCATT+TGG | + | chr2.2:16330551-16330570 | None:intergenic | 25.0% |
!! | ATTTTGTTCATAGATTCCTT+AGG | + | chr2.2:16329493-16329512 | None:intergenic | 25.0% |
!! | CTTAACAATGATAATGACAA+AGG | - | chr2.2:16325816-16325835 | MS.gene060666:CDS | 25.0% |
!! | GAAGATACAACAAAGTATTT+AGG | + | chr2.2:16326170-16326189 | None:intergenic | 25.0% |
!! | TAACAATGATAATGACAAAG+GGG | - | chr2.2:16325818-16325837 | MS.gene060666:CDS | 25.0% |
!! | TATTTTACATGCTAAATGTC+CGG | - | chr2.2:16326732-16326751 | MS.gene060666:CDS | 25.0% |
!! | TTGGCCTTCTATTAAAAAAA+TGG | - | chr2.2:16328721-16328740 | MS.gene060666:intron | 25.0% |
!! | TTTTGTTCATAGATTCCTTA+GGG | + | chr2.2:16329492-16329511 | None:intergenic | 25.0% |
!!! | ATAAGTGTCTCTTTTTTTTG+AGG | - | chr2.2:16326783-16326802 | MS.gene060666:CDS | 25.0% |
!!! | ATTAGTTGTGTTGATTTCAA+TGG | - | chr2.2:16329705-16329724 | MS.gene060666:intron | 25.0% |
!!! | CAACTTTTTTAGAAGATAAG+GGG | + | chr2.2:16328820-16328839 | None:intergenic | 25.0% |
!!! | GCAACTTTTTTAGAAGATAA+GGG | + | chr2.2:16328821-16328840 | None:intergenic | 25.0% |
!!! | TAAAATTGGTTTTTCTCTTG+TGG | - | chr2.2:16326441-16326460 | MS.gene060666:intron | 25.0% |
!!! | TATAAACCTGGTTTTCAAAA+AGG | + | chr2.2:16326370-16326389 | None:intergenic | 25.0% |
!!! | TGCAACATTTTAAAACTTAG+GGG | + | chr2.2:16328698-16328717 | None:intergenic | 25.0% |
!!! | TGCAACTTTTTTAGAAGATA+AGG | + | chr2.2:16328822-16328841 | None:intergenic | 25.0% |
!!! | TGGTCATTTATTTCTGATTT+TGG | - | chr2.2:16325920-16325939 | MS.gene060666:intron | 25.0% |
!!! | TTGATCAAGTGTTGAAAAAA+TGG | + | chr2.2:16330931-16330950 | None:intergenic | 25.0% |
AAACGACTAATATTGTGAGA+CGG | + | chr2.2:16329656-16329675 | None:intergenic | 30.0% | |
AACTCAAATTCTAGTAAAGC+AGG | - | chr2.2:16330559-16330578 | MS.gene060666:intron | 30.0% | |
AAGAATTAAGGATTCAGGAA+GGG | + | chr2.2:16326060-16326079 | None:intergenic | 30.0% | |
AAGAGACAATTATTGTGAGA+CGG | - | chr2.2:16329891-16329910 | MS.gene060666:intron | 30.0% | |
AATGATGAGAGAAACTATCA+AGG | + | chr2.2:16327849-16327868 | None:intergenic | 30.0% | |
ACTAATTTCGTTGTCTTTGT+TGG | + | chr2.2:16330503-16330522 | None:intergenic | 30.0% | |
ACTTCATGTATGAAATGCAT+AGG | + | chr2.2:16327597-16327616 | None:intergenic | 30.0% | |
AGCAATACCAAGAAGAATTA+AGG | + | chr2.2:16326072-16326091 | None:intergenic | 30.0% | |
AGCATATTTCCCTAAACATA+AGG | + | chr2.2:16328758-16328777 | None:intergenic | 30.0% | |
AGGTTTATGCACGATAATTA+AGG | - | chr2.2:16329677-16329696 | MS.gene060666:intron | 30.0% | |
ATATACAGTTAAGAGGGAAT+AGG | + | chr2.2:16326895-16326914 | None:intergenic | 30.0% | |
ATGAGTCAAAAATTAAGTGG+TGG | - | chr2.2:16330808-16330827 | MS.gene060666:CDS | 30.0% | |
ATTATCATAAACTATCCTGG+AGG | + | chr2.2:16328622-16328641 | None:intergenic | 30.0% | |
ATTCCATGGAGAATCATATT+TGG | - | chr2.2:16325959-16325978 | MS.gene060666:intron | 30.0% | |
CATATTTCCCTAAACATAAG+GGG | + | chr2.2:16328756-16328775 | None:intergenic | 30.0% | |
CATATTTCTCTTATGTTAGG+GGG | + | chr2.2:16328788-16328807 | None:intergenic | 30.0% | |
CCAAGAATGTTATTAGAACA+TGG | + | chr2.2:16325903-16325922 | None:intergenic | 30.0% | |
CCATGTTCTAATAACATTCT+TGG | - | chr2.2:16325900-16325919 | MS.gene060666:CDS | 30.0% | |
CCCTTATTAAATGTAGTTAG+TGG | - | chr2.2:16329754-16329773 | MS.gene060666:intron | 30.0% | |
CTAAAACCATTTAGCAACAT+AGG | + | chr2.2:16331408-16331427 | None:intergenic | 30.0% | |
CTCACAATATTAGTCGTTTA+AGG | - | chr2.2:16329657-16329676 | MS.gene060666:intron | 30.0% | |
CTGATAAAGATGCTATCAAA+AGG | - | chr2.2:16330243-16330262 | MS.gene060666:intron | 30.0% | |
GAACAAATCTTCAAGATTCT+TGG | - | chr2.2:16325993-16326012 | MS.gene060666:intron | 30.0% | |
GATACCTCATATTCATCAAA+TGG | - | chr2.2:16327219-16327238 | MS.gene060666:intron | 30.0% | |
GCAATTGTTTGTATTGTGAT+GGG | - | chr2.2:16332139-16332158 | MS.gene060666:CDS | 30.0% | |
GCATATTTCCCTAAACATAA+GGG | + | chr2.2:16328757-16328776 | None:intergenic | 30.0% | |
GGATGATTGTTTATTAGACA+TGG | - | chr2.2:16330977-16330996 | MS.gene060666:intron | 30.0% | |
GTCTGATATATACAGTTAAG+AGG | + | chr2.2:16326902-16326921 | None:intergenic | 30.0% | |
GTGTTTATGAACAACATTCT+TGG | - | chr2.2:16332043-16332062 | MS.gene060666:CDS | 30.0% | |
GTTATGTACGTAGAAAACTA+TGG | + | chr2.2:16329214-16329233 | None:intergenic | 30.0% | |
TAAAGAGCTGCATATTTCAT+TGG | + | chr2.2:16328295-16328314 | None:intergenic | 30.0% | |
TACAGCAATAGCTTATACAT+AGG | + | chr2.2:16329627-16329646 | None:intergenic | 30.0% | |
TATACAGTTAAGAGGGAATA+GGG | + | chr2.2:16326894-16326913 | None:intergenic | 30.0% | |
TATTCACTAAAACACGACTA+TGG | - | chr2.2:16330651-16330670 | MS.gene060666:intron | 30.0% | |
TCAAATAATTTAGGGATCCT+AGG | + | chr2.2:16331667-16331686 | None:intergenic | 30.0% | |
TCTTCCATTTGATGAATATG+AGG | + | chr2.2:16327226-16327245 | None:intergenic | 30.0% | |
TTTGAGTCAATGCAGATTTA+TGG | - | chr2.2:16332016-16332035 | MS.gene060666:CDS | 30.0% | |
! | AAGTAAAAGAGTTGTTGCTT+GGG | - | chr2.2:16329308-16329327 | MS.gene060666:intron | 30.0% |
! | AGAATAAAACAAGCTTTGAC+TGG | - | chr2.2:16327243-16327262 | MS.gene060666:intron | 30.0% |
! | CCCAATAAATTGATTTCCAA+TGG | - | chr2.2:16325753-16325772 | MS.gene060666:CDS | 30.0% |
! | CGGTTTATAATTTTGTGAAC+CGG | + | chr2.2:16326417-16326436 | None:intergenic | 30.0% |
! | CTTCTTCACTATTTTATCCT+TGG | - | chr2.2:16331631-16331650 | MS.gene060666:intron | 30.0% |
! | CTTTTAACATGTCTGCTATT+TGG | + | chr2.2:16329366-16329385 | None:intergenic | 30.0% |
! | GAGTATTGTAAGCAAATGTA+TGG | - | chr2.2:16325870-16325889 | MS.gene060666:CDS | 30.0% |
! | GTATCTGATATCATTGGTTA+TGG | - | chr2.2:16332222-16332241 | MS.gene060666:CDS | 30.0% |
! | GTTTCAAAATGTTGCGATTT+TGG | + | chr2.2:16328932-16328951 | None:intergenic | 30.0% |
! | TAGTTATCACTTCTTTAAGG+AGG | - | chr2.2:16328641-16328660 | MS.gene060666:CDS | 30.0% |
! | TATAGTAATTTGGAATTGGG+AGG | - | chr2.2:16328171-16328190 | MS.gene060666:intron | 30.0% |
! | TTTAAGGAGGAGTTGTTATT+AGG | - | chr2.2:16328654-16328673 | MS.gene060666:CDS | 30.0% |
!! | ACCAAAGAAGAATTTGTTAG+TGG | - | chr2.2:16329415-16329434 | MS.gene060666:intron | 30.0% |
!! | AGTGAGAATGAATTTGTTGA+TGG | - | chr2.2:16330520-16330539 | MS.gene060666:intron | 30.0% |
!! | CTCTAAAATTTGTAGCCAAA+GGG | + | chr2.2:16331188-16331207 | None:intergenic | 30.0% |
!! | CTTTTGATAGCATCTTTATC+AGG | + | chr2.2:16330245-16330264 | None:intergenic | 30.0% |
!! | TATGAGTACTTGTTATTCCA+TGG | - | chr2.2:16325945-16325964 | MS.gene060666:intron | 30.0% |
!! | TCTCTAAAATTTGTAGCCAA+AGG | + | chr2.2:16331189-16331208 | None:intergenic | 30.0% |
!! | TTCAATCCTTTTTGAAAACC+AGG | - | chr2.2:16326361-16326380 | MS.gene060666:intron | 30.0% |
!!! | GCAACATTTTAAAACTTAGG+GGG | + | chr2.2:16328697-16328716 | None:intergenic | 30.0% |
!!! | TTTTGAACACTTGCTATTAG+AGG | + | chr2.2:16331114-16331133 | None:intergenic | 30.0% |
AAAAGTGACCCCTTATGTTT+AGG | - | chr2.2:16328745-16328764 | MS.gene060666:intron | 35.0% | |
AAAAGTGGAACGAAAACTAG+TGG | + | chr2.2:16332170-16332189 | None:intergenic | 35.0% | |
AAAGTGACCCCTTATGTTTA+GGG | - | chr2.2:16328746-16328765 | MS.gene060666:intron | 35.0% | |
AAATCTGACTCACCCATTTA+TGG | + | chr2.2:16328447-16328466 | None:intergenic | 35.0% | |
AACTGATGCAATCTCAATCT+CGG | - | chr2.2:16328053-16328072 | MS.gene060666:intron | 35.0% | |
AAGTCATGCTCAGAATGATA+TGG | - | chr2.2:16330190-16330209 | MS.gene060666:CDS | 35.0% | |
AATAGTGTACTTCATCATGC+AGG | - | chr2.2:16329236-16329255 | MS.gene060666:intron | 35.0% | |
ACCATGAATTCAGTCAACAT+GGG | - | chr2.2:16329263-16329282 | MS.gene060666:intron | 35.0% | |
ACGTAGTAAGACGTGTATTA+AGG | + | chr2.2:16327301-16327320 | None:intergenic | 35.0% | |
AGAAAAGAACGTGAACTGAA+GGG | - | chr2.2:16330146-16330165 | MS.gene060666:CDS | 35.0% | |
AGCTCAAAATCTTCTTCTCA+TGG | - | chr2.2:16330583-16330602 | MS.gene060666:intron | 35.0% | |
AGTTAGTGGAGTAGTTAAGT+TGG | - | chr2.2:16329768-16329787 | MS.gene060666:intron | 35.0% | |
ATGGAAGAGAATCAAACCAA+AGG | - | chr2.2:16331018-16331037 | MS.gene060666:intron | 35.0% | |
ATTTGCTTACAATACTCCTC+TGG | + | chr2.2:16325867-16325886 | None:intergenic | 35.0% | |
CAAATAGGAGTAAGTGAAAG+GGG | + | chr2.2:16327911-16327930 | None:intergenic | 35.0% | |
CATCTCATACTTCATTTACC+AGG | - | chr2.2:16327883-16327902 | MS.gene060666:intron | 35.0% | |
CCAAGAAGAATTAAGGATTC+AGG | + | chr2.2:16326065-16326084 | None:intergenic | 35.0% | |
CCAATGATATCAGATACAAG+AGG | + | chr2.2:16332219-16332238 | None:intergenic | 35.0% | |
CCTCTTGTATCTGATATCAT+TGG | - | chr2.2:16332216-16332235 | MS.gene060666:CDS | 35.0% | |
CCTGAATCCTTAATTCTTCT+TGG | - | chr2.2:16326062-16326081 | MS.gene060666:intron | 35.0% | |
CGTAGTAAGACGTGTATTAA+GGG | + | chr2.2:16327300-16327319 | None:intergenic | 35.0% | |
CTAAAGCCTATGTTGCTAAA+TGG | - | chr2.2:16331399-16331418 | MS.gene060666:intron | 35.0% | |
CTAATGTAGCTGCCATAAAT+GGG | - | chr2.2:16328432-16328451 | MS.gene060666:CDS | 35.0% | |
GAAGAATTAAGGATTCAGGA+AGG | + | chr2.2:16326061-16326080 | None:intergenic | 35.0% | |
GAAGTAAAAGAGTTGTTGCT+TGG | - | chr2.2:16329307-16329326 | MS.gene060666:intron | 35.0% | |
GAATAACCTATTGCATCACA+AGG | + | chr2.2:16330350-16330369 | None:intergenic | 35.0% | |
GATAGGTTATGGCATTACTA+TGG | - | chr2.2:16327715-16327734 | MS.gene060666:CDS | 35.0% | |
GCAAATAGGAGTAAGTGAAA+GGG | + | chr2.2:16327912-16327931 | None:intergenic | 35.0% | |
GCATGATGAAGTACACTATT+AGG | + | chr2.2:16329236-16329255 | None:intergenic | 35.0% | |
GCCACTAACAAATTCTTCTT+TGG | + | chr2.2:16329419-16329438 | None:intergenic | 35.0% | |
GGATATAGACACTAGAAAGA+TGG | - | chr2.2:16327736-16327755 | MS.gene060666:CDS | 35.0% | |
GGCAATTGTTTGTATTGTGA+TGG | - | chr2.2:16332138-16332157 | MS.gene060666:CDS | 35.0% | |
TACCATGAATTCAGTCAACA+TGG | - | chr2.2:16329262-16329281 | MS.gene060666:intron | 35.0% | |
TACTTCTCACACAATGTATG+AGG | - | chr2.2:16331254-16331273 | MS.gene060666:intron | 35.0% | |
TAGAAAGATGGCAAGAATCA+TGG | - | chr2.2:16327748-16327767 | MS.gene060666:CDS | 35.0% | |
TCCTTGGTTTATATACTCCT+AGG | - | chr2.2:16331647-16331666 | MS.gene060666:intron | 35.0% | |
TGAATCTTCTTCTAATCCAG+AGG | - | chr2.2:16325848-16325867 | MS.gene060666:CDS | 35.0% | |
TGCAAATAGGAGTAAGTGAA+AGG | + | chr2.2:16327913-16327932 | None:intergenic | 35.0% | |
TGGAAGAGAATCAAACCAAA+GGG | - | chr2.2:16331019-16331038 | MS.gene060666:intron | 35.0% | |
TTGAAATTGAGTAGCTAGCT+AGG | + | chr2.2:16326131-16326150 | None:intergenic | 35.0% | |
TTGAACATCATCAACTCCAT+TGG | + | chr2.2:16325772-16325791 | None:intergenic | 35.0% | |
! | AACAGACTTTTATCAAGCCA+TGG | - | chr2.2:16330111-16330130 | MS.gene060666:CDS | 35.0% |
! | ATCAGATACAAGAGGTATGT+TGG | + | chr2.2:16332211-16332230 | None:intergenic | 35.0% |
! | ATTTTCAGCTGATGTATTGG+TGG | - | chr2.2:16332114-16332133 | MS.gene060666:CDS | 35.0% |
! | GCTAGTGCTTTTGATATTCT+TGG | - | chr2.2:16326032-16326051 | MS.gene060666:intron | 35.0% |
! | GGAATTTTCAGCTGATGTAT+TGG | - | chr2.2:16332111-16332130 | MS.gene060666:CDS | 35.0% |
! | TCAGATACAAGAGGTATGTT+GGG | + | chr2.2:16332210-16332229 | None:intergenic | 35.0% |
! | TCCTAGGAGTATATAAACCA+AGG | + | chr2.2:16331651-16331670 | None:intergenic | 35.0% |
!! | CTCTTTCATTTTAGTCCCTT+TGG | - | chr2.2:16331170-16331189 | MS.gene060666:intron | 35.0% |
!!! | AGTCTTGTTTTCTCAATCTG+AGG | + | chr2.2:16328320-16328339 | None:intergenic | 35.0% |
!!! | ATCGCAACATTTTGAAACCT+AGG | - | chr2.2:16328934-16328953 | MS.gene060666:intron | 35.0% |
!!! | TGGCATCACCTTTATTTTAG+TGG | + | chr2.2:16326712-16326731 | None:intergenic | 35.0% |
ACTTAAACTCTCAGCAGACT+TGG | - | chr2.2:16326265-16326284 | MS.gene060666:intron | 40.0% | |
AGACAATTATTGTGAGACGG+AGG | - | chr2.2:16329894-16329913 | MS.gene060666:intron | 40.0% | |
AGCCATAGCATATGTGATGT+TGG | - | chr2.2:16331059-16331078 | MS.gene060666:intron | 40.0% | |
AGTTAAGAGGGAATAGGGAT+AGG | + | chr2.2:16326889-16326908 | None:intergenic | 40.0% | |
ATCTTCAAGATTCTTGGTCC+AGG | - | chr2.2:16325999-16326018 | MS.gene060666:intron | 40.0% | |
CAGCCAAATATGATTCTCCA+TGG | + | chr2.2:16325965-16325984 | None:intergenic | 40.0% | |
CATGAATTCAGTCAACATGG+GGG | - | chr2.2:16329265-16329284 | MS.gene060666:intron | 40.0% | |
CATGCTCAGAATGATATGGT+TGG | - | chr2.2:16330194-16330213 | MS.gene060666:CDS | 40.0% | |
CCATGAATTCAGTCAACATG+GGG | - | chr2.2:16329264-16329283 | MS.gene060666:intron | 40.0% | |
CCATTTATGGCAGCTACATT+AGG | + | chr2.2:16328434-16328453 | None:intergenic | 40.0% | |
CCTAATGTAGCTGCCATAAA+TGG | - | chr2.2:16328431-16328450 | MS.gene060666:intron | 40.0% | |
CCTCACTACTTTCTCTAACT+CGG | + | chr2.2:16330413-16330432 | None:intergenic | 40.0% | |
CGAGTTAGAGAAAGTAGTGA+GGG | - | chr2.2:16330411-16330430 | MS.gene060666:intron | 40.0% | |
CTAACTCGGATCTTGAAACA+TGG | + | chr2.2:16330399-16330418 | None:intergenic | 40.0% | |
CTCAGAATGATATGGTTGGT+AGG | - | chr2.2:16330198-16330217 | MS.gene060666:CDS | 40.0% | |
GACAATTATTGTGAGACGGA+GGG | - | chr2.2:16329895-16329914 | MS.gene060666:intron | 40.0% | |
GACTAATATTGTGAGACGGA+GGG | + | chr2.2:16329652-16329671 | None:intergenic | 40.0% | |
GAGAAAAGAACGTGAACTGA+AGG | - | chr2.2:16330145-16330164 | MS.gene060666:CDS | 40.0% | |
GAGTAGGAATCTGCATTATG+AGG | + | chr2.2:16327793-16327812 | None:intergenic | 40.0% | |
GCCATAGCATATGTGATGTT+GGG | - | chr2.2:16331060-16331079 | MS.gene060666:intron | 40.0% | |
GGAAGAGAATCAAACCAAAG+GGG | - | chr2.2:16331020-16331039 | MS.gene060666:intron | 40.0% | |
GGAAGATGTTGAGAAGGTAA+TGG | - | chr2.2:16330999-16331018 | MS.gene060666:intron | 40.0% | |
GTAGAGAAAGAGAACAGAGT+AGG | + | chr2.2:16327809-16327828 | None:intergenic | 40.0% | |
GTCCTCTCTGATATTTGTGT+CGG | + | chr2.2:16329344-16329363 | None:intergenic | 40.0% | |
GTTAAGAGGGAATAGGGATA+GGG | + | chr2.2:16326888-16326907 | None:intergenic | 40.0% | |
TAACCAGACAAAGCATGCTT+TGG | - | chr2.2:16329453-16329472 | MS.gene060666:intron | 40.0% | |
TATCCAAAGCATGCTTTGTC+TGG | + | chr2.2:16329459-16329478 | None:intergenic | 40.0% | |
TATCCTGGAGGAGAGTTTAT+GGG | + | chr2.2:16328610-16328629 | None:intergenic | 40.0% | |
TCCCAACATCACATATGCTA+TGG | + | chr2.2:16331064-16331083 | None:intergenic | 40.0% | |
TCTACAAAAGATCCTAGCTG+AGG | - | chr2.2:16328400-16328419 | MS.gene060666:intron | 40.0% | |
TGTTCATAGATTCCTTAGGG+AGG | + | chr2.2:16329489-16329508 | None:intergenic | 40.0% | |
TGTTGGCATCAAGATCATGA+AGG | + | chr2.2:16330486-16330505 | None:intergenic | 40.0% | |
TTGCTTGCCAACAATAACAC+AGG | + | chr2.2:16327172-16327191 | None:intergenic | 40.0% | |
TTTCTCACGTGTTCAATCCA+TGG | + | chr2.2:16330131-16330150 | None:intergenic | 40.0% | |
! | AGGTTATTCGAGCAAGTTGA+TGG | - | chr2.2:16330361-16330380 | MS.gene060666:intron | 40.0% |
! | ATACAAGAGGTATGTTGGGA+AGG | + | chr2.2:16332206-16332225 | None:intergenic | 40.0% |
! | ATTCTTGGTCCAGGTGTTTT+TGG | - | chr2.2:16326008-16326027 | MS.gene060666:intron | 40.0% |
! | CACTGGACTTTCAAGTGATA+AGG | - | chr2.2:16327065-16327084 | MS.gene060666:intron | 40.0% |
!! | ATATTGTAGTGGACTGAGAG+AGG | + | chr2.2:16331291-16331310 | None:intergenic | 40.0% |
!! | CAAAAATTCTCTGAAGCTGC+AGG | - | chr2.2:16331129-16331148 | MS.gene060666:intron | 40.0% |
!! | CACTAATGGCCATTTTCAAC+TGG | - | chr2.2:16328997-16329016 | MS.gene060666:intron | 40.0% |
!! | GAACAACATTCTTGGCTTTG+TGG | - | chr2.2:16332051-16332070 | MS.gene060666:CDS | 40.0% |
!! | TATTCTAGTTTGGCCTCTAC+CGG | + | chr2.2:16326754-16326773 | None:intergenic | 40.0% |
!! | TGTTTGTTGTTGTCAGTCAC+TGG | - | chr2.2:16327048-16327067 | MS.gene060666:intron | 40.0% |
!! | TTGTTGATGGCTTCACCAAA+TGG | - | chr2.2:16330533-16330552 | MS.gene060666:intron | 40.0% |
!!! | GCAACATTTTGAAACCTAGG+AGG | - | chr2.2:16328937-16328956 | MS.gene060666:intron | 40.0% |
ACATGCTAAATGTCCGGTAG+AGG | - | chr2.2:16326738-16326757 | MS.gene060666:CDS | 45.0% | |
ACTGGAGTTGGATTGTTAGC+TGG | - | chr2.2:16327111-16327130 | MS.gene060666:intron | 45.0% | |
AGCCGACACAAATATCAGAG+AGG | - | chr2.2:16329339-16329358 | MS.gene060666:intron | 45.0% | |
AGCTAACAATCCAACTCCAG+TGG | + | chr2.2:16327112-16327131 | None:intergenic | 45.0% | |
ATTCCCATAAACTCTCCTCC+AGG | - | chr2.2:16328604-16328623 | MS.gene060666:CDS | 45.0% | |
CAAAAGATCCTAGCTGAGGA+TGG | - | chr2.2:16328404-16328423 | MS.gene060666:intron | 45.0% | |
CCGAGTTAGAGAAAGTAGTG+AGG | - | chr2.2:16330410-16330429 | MS.gene060666:intron | 45.0% | |
CGACTAATATTGTGAGACGG+AGG | + | chr2.2:16329653-16329672 | None:intergenic | 45.0% | |
CTATCCTGGAGGAGAGTTTA+TGG | + | chr2.2:16328611-16328630 | None:intergenic | 45.0% | |
CTCGATGAGCCAGTTGAAAA+TGG | + | chr2.2:16329009-16329028 | None:intergenic | 45.0% | |
CTGAAGGGACATCTTATCTC+TGG | - | chr2.2:16330161-16330180 | MS.gene060666:CDS | 45.0% | |
CTTGCTCCTTGTGATGCAAT+AGG | - | chr2.2:16330341-16330360 | MS.gene060666:intron | 45.0% | |
GAATCATATTTGGCTGCTGG+AGG | - | chr2.2:16325969-16325988 | MS.gene060666:intron | 45.0% | |
GACATGGGAAGATGTTGAGA+AGG | - | chr2.2:16330993-16331012 | MS.gene060666:intron | 45.0% | |
GGAATCTGCATTATGAGGAG+TGG | + | chr2.2:16327788-16327807 | None:intergenic | 45.0% | |
GGAGAATCATATTTGGCTGC+TGG | - | chr2.2:16325966-16325985 | MS.gene060666:intron | 45.0% | |
GGTAGGATGCTCAATGATGA+TGG | - | chr2.2:16330215-16330234 | MS.gene060666:intron | 45.0% | |
! | CAATTATGGCCCCTGTTTTG+GGG | - | chr2.2:16328840-16328859 | MS.gene060666:intron | 45.0% |
! | CCCCATGTTGACTGAATTCA+TGG | + | chr2.2:16329267-16329286 | None:intergenic | 45.0% |
! | CTCAGCAGACTTGGTAAGAT+GGG | - | chr2.2:16326274-16326293 | MS.gene060666:intron | 45.0% |
! | GCAATTATGGCCCCTGTTTT+GGG | - | chr2.2:16328839-16328858 | MS.gene060666:intron | 45.0% |
! | GCTAGCTTCTTTGATTGCTG+AGG | + | chr2.2:16331217-16331236 | None:intergenic | 45.0% |
! | GGCGTCTTCTCAGCAATTTT+GGG | - | chr2.2:16328868-16328887 | MS.gene060666:intron | 45.0% |
! | GTAGTGAGGGAGACTCATTT+TGG | - | chr2.2:16330424-16330443 | MS.gene060666:intron | 45.0% |
! | TCTCAGCAGACTTGGTAAGA+TGG | - | chr2.2:16326273-16326292 | MS.gene060666:intron | 45.0% |
! | TGCAATTATGGCCCCTGTTT+TGG | - | chr2.2:16328838-16328857 | MS.gene060666:intron | 45.0% |
! | TGGCGTCTTCTCAGCAATTT+TGG | - | chr2.2:16328867-16328886 | MS.gene060666:intron | 45.0% |
! | TTCAGCTGATGTATTGGTGG+TGG | - | chr2.2:16332117-16332136 | MS.gene060666:CDS | 45.0% |
!! | GAGGGAGACTCATTTTGGTA+AGG | - | chr2.2:16330429-16330448 | MS.gene060666:intron | 45.0% |
!! | GGATAGAAAGTACCTCCCTA+AGG | - | chr2.2:16329474-16329493 | MS.gene060666:intron | 45.0% |
!! | TTCGTTCCACTTTTCCTCTG+TGG | - | chr2.2:16332176-16332195 | MS.gene060666:CDS | 45.0% |
!! | AAAAATATTCAAATAATTTA+GGG | + | chr2.2:16331675-16331694 | None:intergenic | 5.0% |
!! | AAAAGATTTAAAAAAAAAAA+TGG | + | chr2.2:16326336-16326355 | None:intergenic | 5.0% |
!! | TAAAAATATTCAAATAATTT+AGG | + | chr2.2:16331676-16331695 | None:intergenic | 5.0% |
!!! | TTATTTGAATATTTTTAAAT+AGG | - | chr2.2:16331679-16331698 | MS.gene060666:intron | 5.0% |
!!! | TTTTTTTTAAAATTTATGAT+AGG | - | chr2.2:16327698-16327717 | MS.gene060666:CDS | 5.0% |
AAACCAAAGGGGTGACTGCA+TGG | - | chr2.2:16331031-16331050 | MS.gene060666:intron | 50.0% | |
ACGTGTGAGATGACACCTCA+TGG | - | chr2.2:16329072-16329091 | MS.gene060666:intron | 50.0% | |
CACAACTGTGAGAAGCAGGA+TGG | + | chr2.2:16327142-16327161 | None:intergenic | 50.0% | |
CCTGCTTCTCACAGTTGTGT+GGG | - | chr2.2:16327143-16327162 | MS.gene060666:intron | 50.0% | |
CTGCTTCTCACAGTTGTGTG+GGG | - | chr2.2:16327144-16327163 | MS.gene060666:intron | 50.0% | |
GAGTATGCTTCCACTGGAGT+TGG | - | chr2.2:16327099-16327118 | MS.gene060666:intron | 50.0% | |
GCACTAGCACCAAAAACACC+TGG | + | chr2.2:16326020-16326039 | None:intergenic | 50.0% | |
GGATGTCCACAGAGGAAAAG+TGG | + | chr2.2:16332185-16332204 | None:intergenic | 50.0% | |
TAACCATGCAGTCACCCCTT+TGG | + | chr2.2:16331037-16331056 | None:intergenic | 50.0% | |
TAGGAGTTCCATCCTCAGCT+AGG | + | chr2.2:16328415-16328434 | None:intergenic | 50.0% | |
TCCTGCTTCTCACAGTTGTG+TGG | - | chr2.2:16327142-16327161 | MS.gene060666:intron | 50.0% | |
TGCTTCTCACAGTTGTGTGG+GGG | - | chr2.2:16327145-16327164 | MS.gene060666:intron | 50.0% | |
TGGTAAGGCTGTAGATGCAG+AGG | - | chr2.2:16330444-16330463 | MS.gene060666:intron | 50.0% | |
! | AACTGCACTTTTCGCCTCCT+AGG | + | chr2.2:16328954-16328973 | None:intergenic | 50.0% |
! | TGGGGGACCTGTGTTATTGT+TGG | - | chr2.2:16327162-16327181 | MS.gene060666:intron | 50.0% |
!! | TTCGAGCAAGTTGATGGCGA+TGG | - | chr2.2:16330367-16330386 | MS.gene060666:intron | 50.0% |
CCCACACAACTGTGAGAAGC+AGG | + | chr2.2:16327146-16327165 | None:intergenic | 55.0% | |
GTTGGGAAGGATGTCCACAG+AGG | + | chr2.2:16332193-16332212 | None:intergenic | 55.0% | |
! | GCGCAAGAGTATGCTTCCAC+TGG | - | chr2.2:16327093-16327112 | MS.gene060666:intron | 55.0% |
!! | GAGTAAGTGAAAGGGGCACC+TGG | + | chr2.2:16327904-16327923 | None:intergenic | 55.0% |
ACGCCACGTGCCCCAAAACA+GGG | + | chr2.2:16328853-16328872 | None:intergenic | 60.0% | |
CGCCACGTGCCCCAAAACAG+GGG | + | chr2.2:16328852-16328871 | None:intergenic | 65.0% | |
GACGCCACGTGCCCCAAAAC+AGG | + | chr2.2:16328854-16328873 | None:intergenic | 65.0% | |
!!! | GGCCCCTGTTTTGGGGCACG+TGG | - | chr2.2:16328847-16328866 | MS.gene060666:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 16325672 | 16332279 | 16325672 | ID=MS.gene060666 |
chr2.2 | mRNA | 16325672 | 16332279 | 16325672 | ID=MS.gene060666.t1;Parent=MS.gene060666 |
chr2.2 | exon | 16331868 | 16332279 | 16331868 | ID=MS.gene060666.t1.exon1;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16331868 | 16332279 | 16331868 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16330687 | 16330887 | 16330687 | ID=MS.gene060666.t1.exon2;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16330687 | 16330887 | 16330687 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16330047 | 16330231 | 16330047 | ID=MS.gene060666.t1.exon3;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16330047 | 16330231 | 16330047 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16329498 | 16329643 | 16329498 | ID=MS.gene060666.t1.exon4;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16329498 | 16329643 | 16329498 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16328432 | 16328693 | 16328432 | ID=MS.gene060666.t1.exon5;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16328432 | 16328693 | 16328432 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16327687 | 16327835 | 16327687 | ID=MS.gene060666.t1.exon6;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16327687 | 16327835 | 16327687 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16327336 | 16327588 | 16327336 | ID=MS.gene060666.t1.exon7;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16327336 | 16327588 | 16327336 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16326676 | 16326957 | 16326676 | ID=MS.gene060666.t1.exon8;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16326676 | 16326957 | 16326676 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
chr2.2 | exon | 16325672 | 16325920 | 16325672 | ID=MS.gene060666.t1.exon9;Parent=MS.gene060666.t1 |
chr2.2 | CDS | 16325672 | 16325920 | 16325672 | ID=cds.MS.gene060666.t1;Parent=MS.gene060666.t1 |
Gene Sequence |
Protein sequence |