Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063107.t1 | XP_003604026.1 | 93.5 | 573 | 5 | 1 | 4 | 544 | 2 | 574 | 0.00E+00 | 1120.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063107.t1 | Q9SW48 | 74.5 | 565 | 104 | 6 | 14 | 543 | 11 | 570 | 5.6e-252 | 871.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063107.t1 | G7J8G8 | 93.5 | 573 | 5 | 1 | 4 | 544 | 2 | 574 | 0.0e+00 | 1120.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene063107 | 0.827301 | 1.69E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene063107 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene063107 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene063107 | 0.820482 | 6.70E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene063107 | 0.836597 | 8.52E-57 | -1.69E-46 |
| MS.gene052612 | MS.gene063107 | 0.821229 | 4.51E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene063107 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene063107 | 0.804321 | 2.28E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene063107 | 0.808669 | 2.76E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene063107 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene063107 | 0.804606 | 1.99E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene063107 | 0.813658 | 2.29E-51 | -1.69E-46 |
| MS.gene059154 | MS.gene063107 | 0.864037 | 1.62E-64 | -1.69E-46 |
| MS.gene060587 | MS.gene063107 | 0.816164 | 6.37E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063107.t1 | MTR_3g117710 | 93.543 | 573 | 5 | 1 | 4 | 544 | 2 | 574 | 0.0 | 1104 |
| MS.gene063107.t1 | MTR_1g096140 | 69.665 | 567 | 121 | 8 | 14 | 543 | 2 | 554 | 0.0 | 810 |
| MS.gene063107.t1 | MTR_1g095970 | 65.432 | 567 | 131 | 7 | 11 | 543 | 17 | 552 | 0.0 | 748 |
| MS.gene063107.t1 | MTR_4g075540 | 80.851 | 376 | 72 | 0 | 102 | 477 | 40 | 415 | 0.0 | 650 |
| MS.gene063107.t1 | MTR_8g092170 | 52.121 | 495 | 199 | 3 | 80 | 536 | 132 | 626 | 0.0 | 536 |
| MS.gene063107.t1 | MTR_7g111890 | 54.405 | 454 | 172 | 2 | 113 | 531 | 129 | 582 | 0.0 | 525 |
| MS.gene063107.t1 | MTR_4g123030 | 53.696 | 460 | 175 | 3 | 110 | 531 | 181 | 640 | 4.97e-180 | 522 |
| MS.gene063107.t1 | MTR_1g084610 | 53.611 | 457 | 176 | 3 | 113 | 533 | 113 | 569 | 2.58e-178 | 515 |
| MS.gene063107.t1 | MTR_4g123030 | 58.127 | 363 | 146 | 2 | 110 | 466 | 181 | 543 | 1.10e-154 | 453 |
| MS.gene063107.t1 | MTR_3g015100 | 55.862 | 145 | 64 | 0 | 322 | 466 | 9 | 153 | 3.13e-60 | 196 |
| MS.gene063107.t1 | MTR_3g025460 | 54.286 | 70 | 32 | 0 | 150 | 219 | 91 | 160 | 2.99e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063107.t1 | AT4G34860 | 75.221 | 565 | 100 | 6 | 14 | 543 | 11 | 570 | 0.0 | 874 |
| MS.gene063107.t1 | AT4G34860 | 75.221 | 565 | 100 | 6 | 14 | 543 | 11 | 570 | 0.0 | 874 |
| MS.gene063107.t1 | AT4G34860 | 75.221 | 565 | 100 | 6 | 14 | 543 | 11 | 570 | 0.0 | 874 |
| MS.gene063107.t1 | AT4G09510 | 70.000 | 560 | 120 | 5 | 19 | 543 | 11 | 557 | 0.0 | 816 |
| MS.gene063107.t1 | AT1G35580 | 67.736 | 561 | 128 | 6 | 18 | 542 | 5 | 548 | 0.0 | 778 |
| MS.gene063107.t1 | AT1G35580 | 67.736 | 561 | 128 | 6 | 18 | 542 | 5 | 548 | 0.0 | 778 |
| MS.gene063107.t1 | AT1G22650 | 68.449 | 561 | 114 | 8 | 19 | 543 | 1 | 534 | 0.0 | 778 |
| MS.gene063107.t1 | AT1G72000 | 72.267 | 494 | 100 | 4 | 86 | 543 | 7 | 499 | 0.0 | 746 |
| MS.gene063107.t1 | AT4G09510 | 73.810 | 462 | 106 | 3 | 19 | 477 | 11 | 460 | 0.0 | 723 |
| MS.gene063107.t1 | AT1G35580 | 71.552 | 464 | 112 | 4 | 18 | 477 | 5 | 452 | 0.0 | 692 |
| MS.gene063107.t1 | AT1G22650 | 71.215 | 469 | 105 | 6 | 19 | 483 | 1 | 443 | 0.0 | 687 |
| MS.gene063107.t1 | AT5G22510 | 48.841 | 561 | 222 | 6 | 11 | 533 | 59 | 592 | 0.0 | 538 |
| MS.gene063107.t1 | AT5G22510 | 48.841 | 561 | 222 | 6 | 11 | 533 | 59 | 592 | 0.0 | 538 |
| MS.gene063107.t1 | AT1G56560 | 49.046 | 524 | 217 | 6 | 59 | 533 | 68 | 590 | 0.0 | 524 |
| MS.gene063107.t1 | AT3G06500 | 50.511 | 489 | 201 | 4 | 81 | 531 | 153 | 638 | 4.64e-174 | 507 |
| MS.gene063107.t1 | AT3G05820 | 52.079 | 457 | 181 | 4 | 113 | 531 | 150 | 606 | 1.45e-170 | 497 |
| MS.gene063107.t1 | AT3G05820 | 56.111 | 360 | 152 | 3 | 113 | 466 | 150 | 509 | 9.01e-147 | 432 |
| MS.gene063107.t1 | AT3G06500 | 50.765 | 392 | 156 | 2 | 177 | 531 | 48 | 439 | 7.10e-144 | 423 |
Find 123 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGTTGATTCTGGATTT+TGG | 0.107168 | 3.3:-95641467 | MS.gene063107:CDS |
| CTTGATGATCCTTCACATTT+AGG | 0.135844 | 3.3:-95639778 | MS.gene063107:CDS |
| TTATGATTTCAGGGTGTTTA+TGG | 0.137912 | 3.3:-95640962 | MS.gene063107:intron |
| CATCATGGCGGATACTTTAT+TGG | 0.172811 | 3.3:-95640668 | MS.gene063107:CDS |
| CTGGTCTATTGCTGGTTATT+TGG | 0.241651 | 3.3:-95639815 | MS.gene063107:CDS |
| TGAACAGTCAGTTGCAATTA+TGG | 0.252442 | 3.3:-95640564 | MS.gene063107:CDS |
| GAAACCTTGATAGCAGATTT+TGG | 0.254882 | 3.3:-95641513 | MS.gene063107:CDS |
| TGCTGAAGGGAAAGAGTTTA+TGG | 0.259291 | 3.3:-95640870 | MS.gene063107:CDS |
| TCACGGTGGGAAGAATTAAT+TGG | 0.263132 | 3.3:-95640530 | MS.gene063107:CDS |
| AGGGTTGCTCCTGTTGATTC+TGG | 0.284587 | 3.3:-95641474 | MS.gene063107:CDS |
| AATTCAAGCATTGTTCTTCA+TGG | 0.292043 | 3.3:-95640927 | MS.gene063107:CDS |
| AACTCTTTCCCTTCAGCATC+TGG | 0.317968 | 3.3:+95640875 | None:intergenic |
| CTCTCAATGTTCAAAGTCCT+TGG | 0.321428 | 3.3:+95642223 | None:intergenic |
| ATCATATGAGAAGCCACTTT+TGG | 0.334217 | 3.3:-95640814 | MS.gene063107:CDS |
| ATCATGGCGGATACTTTATT+GGG | 0.335197 | 3.3:-95640667 | MS.gene063107:CDS |
| AACAATGCTTGAATTTCAAT+TGG | 0.347066 | 3.3:+95640935 | None:intergenic |
| AGAAAATTCTTAACAATGTC+TGG | 0.354613 | 3.3:+95641648 | None:intergenic |
| TACTCCAAGATCACTGCTAT+TGG | 0.358290 | 3.3:-95642056 | MS.gene063107:CDS |
| CCTGAGAGCTTCCCAAGCTT+CGG | 0.362174 | 3.3:+95642015 | None:intergenic |
| TTCCCGATTCTTTACCAGAT+TGG | 0.363867 | 3.3:-95640709 | MS.gene063107:CDS |
| TGCTCAAGAGATCAAATTCA+TGG | 0.367029 | 3.3:-95639714 | MS.gene063107:CDS |
| CTGAGAGCTTCCCAAGCTTC+GGG | 0.371080 | 3.3:+95642016 | None:intergenic |
| CGCGGTTTCTGACCGGATCA+TGG | 0.375080 | 3.3:+95641535 | None:intergenic |
| CACGGTGGGAAGAATTAATT+GGG | 0.386404 | 3.3:-95640529 | MS.gene063107:CDS |
| TGCCAAACCTGGTCTATTGC+TGG | 0.394176 | 3.3:-95639823 | MS.gene063107:CDS |
| TTCACCAAAATCTGCTATCA+AGG | 0.396923 | 3.3:+95641509 | None:intergenic |
| AAAGATTGATAGGTTTCATC+TGG | 0.409232 | 3.3:-95641592 | MS.gene063107:CDS |
| AGGCTTATCTCCACGTCTAT+TGG | 0.412169 | 3.3:-95642158 | MS.gene063107:CDS |
| CCGAAGCTTGGGAAGCTCTC+AGG | 0.414554 | 3.3:-95642015 | MS.gene063107:CDS |
| AGTTGGAACAATTGCTGCCT+TGG | 0.417688 | 3.3:-95641963 | MS.gene063107:CDS |
| TGTGTTCCGTCATAATATTC+CGG | 0.421532 | 3.3:+95639877 | None:intergenic |
| CATGAATGGAGGATCATAAC+AGG | 0.421806 | 3.3:-95640467 | MS.gene063107:CDS |
| AATCCAATCTGGTAAAGAAT+CGG | 0.424424 | 3.3:+95640706 | None:intergenic |
| CTAGATGGAGTTACCACAAT+GGG | 0.425352 | 3.3:-95640427 | MS.gene063107:CDS |
| AGACTCTTCGTCTTCAATCA+TGG | 0.427851 | 3.3:-95641620 | MS.gene063107:CDS |
| AACCAGCAATAGACCAGGTT+TGG | 0.430273 | 3.3:+95639821 | None:intergenic |
| AGACTTTGTTCCAAGTGCTC+TGG | 0.430586 | 3.3:-95641691 | MS.gene063107:CDS |
| TCAATGAGTGAACTATCAAT+AGG | 0.444042 | 3.3:-95642178 | MS.gene063107:CDS |
| TTGCTGGTTATTTGGTGGCT+AGG | 0.446100 | 3.3:-95639807 | MS.gene063107:CDS |
| GGAAGCTCTCAGGCGTTCCT+TGG | 0.449024 | 3.3:-95642005 | MS.gene063107:CDS |
| AAGGCAGCAATTGTTCCAAC+TGG | 0.455491 | 3.3:+95641965 | None:intergenic |
| CCAACTTTACTATGTGCTGA+TGG | 0.459852 | 3.3:-95641318 | MS.gene063107:CDS |
| TTGTGATGAGACCAATCTAT+TGG | 0.463367 | 3.3:+95642331 | None:intergenic |
| GTCTATTGCTGGTTATTTGG+TGG | 0.465320 | 3.3:-95639812 | MS.gene063107:CDS |
| TGGTCTCATCACAATGGTAA+TGG | 0.469382 | 3.3:-95642322 | MS.gene063107:CDS |
| CTTGACAACTTCCCTCGCCT+TGG | 0.469584 | 3.3:-95642127 | MS.gene063107:CDS |
| AGATTTGTGCACGGGAGAAA+AGG | 0.470250 | 3.3:+95642087 | None:intergenic |
| CCATCAGCACATAGTAAAGT+TGG | 0.473576 | 3.3:+95641318 | None:intergenic |
| TTGGTGAAAGTGCAATAGGC+AGG | 0.474019 | 3.3:-95641494 | MS.gene063107:CDS |
| CTTTATTGGGAATGTGAGTC+CGG | 0.474021 | 3.3:-95640654 | MS.gene063107:CDS |
| TGACCAGCCTGAATGTCAAA+AGG | 0.475180 | 3.3:-95641391 | MS.gene063107:CDS |
| CCAATCTATTGGAGGGGTAG+AGG | 0.476513 | 3.3:+95642342 | None:intergenic |
| GAGTCCAATAGCAGTGATCT+TGG | 0.477827 | 3.3:+95642052 | None:intergenic |
| CACCAAAATCCAGAATCAAC+AGG | 0.478739 | 3.3:+95641465 | None:intergenic |
| CTGAGTTTATGCTTGTCAGA+GGG | 0.479869 | 3.3:-95641354 | MS.gene063107:CDS |
| GGAACACATGGTCGATACAT+TGG | 0.481896 | 3.3:-95639862 | MS.gene063107:CDS |
| AAGGTTTCGCGGTTTCTGAC+CGG | 0.483631 | 3.3:+95641528 | None:intergenic |
| ATCCAATCTGGTAAAGAATC+GGG | 0.484985 | 3.3:+95640707 | None:intergenic |
| GCTTCAAATCCAACCAAAAG+TGG | 0.485151 | 3.3:+95640801 | None:intergenic |
| TGGTCGATACATTGGGAAGC+AGG | 0.486411 | 3.3:-95639854 | MS.gene063107:CDS |
| GACTCTTCGTCTTCAATCAT+GGG | 0.486513 | 3.3:-95641619 | MS.gene063107:CDS |
| CTGTTCAGGAGTTGCCAAGC+AGG | 0.494417 | 3.3:+95640580 | None:intergenic |
| CCAGATTGCTAAAAGACAAC+TGG | 0.494499 | 3.3:-95639900 | MS.gene063107:intron |
| GCTTCTCATATGATAGCTTA+AGG | 0.495719 | 3.3:+95640823 | None:intergenic |
| CAACTTTACTATGTGCTGAT+GGG | 0.495887 | 3.3:-95641317 | MS.gene063107:CDS |
| GAACACATGGTCGATACATT+GGG | 0.500723 | 3.3:-95639861 | MS.gene063107:CDS |
| TGAAGAAGACCGACAGCTAA+AGG | 0.501224 | 3.3:-95639743 | MS.gene063107:CDS |
| CGGCTAGGATGGATTTCCGC+TGG | 0.506123 | 3.3:-95640634 | MS.gene063107:CDS |
| ATAATTGCAACTGACTGTTC+AGG | 0.506227 | 3.3:+95640566 | None:intergenic |
| CCTCTACCCCTCCAATAGAT+TGG | 0.506254 | 3.3:-95642342 | MS.gene063107:CDS |
| TGAGAATCTTAATTATGATC+AGG | 0.512681 | 3.3:-95641930 | MS.gene063107:intron |
| GAATTTGATCTCTTGAGCAC+AGG | 0.520613 | 3.3:+95639718 | None:intergenic |
| TGGAATACCTTAAAACTAGC+AGG | 0.523302 | 3.3:+95641555 | None:intergenic |
| GAATGTGAGTCCGGCTAGGA+TGG | 0.524824 | 3.3:-95640645 | MS.gene063107:CDS |
| GAATATTATGACGGAACACA+TGG | 0.527626 | 3.3:-95639874 | MS.gene063107:CDS |
| TTTGATTTCATGCCTCATCA+TGG | 0.529497 | 3.3:-95640683 | MS.gene063107:CDS |
| CAGCCCTTGAAAATCATGAA+TGG | 0.529947 | 3.3:-95640481 | MS.gene063107:CDS |
| TCTGAGTTTATGCTTGTCAG+AGG | 0.536420 | 3.3:-95641355 | MS.gene063107:CDS |
| CGTGCATACACAAAATCTAC+AGG | 0.544504 | 3.3:-95641429 | MS.gene063107:CDS |
| AGGCTCGAAAATGCCAAACC+TGG | 0.550502 | 3.3:-95639834 | MS.gene063107:CDS |
| GATAGGTTTCATCTGGCAGA+AGG | 0.553855 | 3.3:-95641585 | MS.gene063107:CDS |
| TTAAGACCAGATTTGTGCAC+GGG | 0.557462 | 3.3:+95642079 | None:intergenic |
| GCTGGATAACAAACTTTGAC+AGG | 0.557935 | 3.3:+95640500 | None:intergenic |
| GCACAGGATCCTTTAGCTGT+CGG | 0.560516 | 3.3:+95639734 | None:intergenic |
| TTGCTTAAGCCAGATGCTGA+AGG | 0.566251 | 3.3:-95640884 | MS.gene063107:CDS |
| TTGGGAATGTGAGTCCGGCT+AGG | 0.569278 | 3.3:-95640649 | MS.gene063107:CDS |
| AATCTGCTATCAAGGTTTCG+CGG | 0.570404 | 3.3:+95641517 | None:intergenic |
| GATGAGACCAATCTATTGGA+GGG | 0.575783 | 3.3:+95642335 | None:intergenic |
| GACCAGCCTGAATGTCAAAA+GGG | 0.576127 | 3.3:-95641390 | MS.gene063107:CDS |
| TGATGAGACCAATCTATTGG+AGG | 0.580435 | 3.3:+95642334 | None:intergenic |
| TGAGTTTATGCTTGTCAGAG+GGG | 0.580700 | 3.3:-95641353 | MS.gene063107:CDS |
| ATCTGGCTTAAGCAATAGCA+TGG | 0.582923 | 3.3:+95640892 | None:intergenic |
| CTGTATGATTGATCGTAGAA+TGG | 0.588231 | 3.3:-95641292 | MS.gene063107:intron |
| ATAGGTTTCATCTGGCAGAA+GGG | 0.588613 | 3.3:-95641584 | MS.gene063107:CDS |
| CTAAAGTATTAGATAAGCCA+AGG | 0.589167 | 3.3:-95642240 | MS.gene063107:CDS |
| CAGCGGAAATCCATCCTAGC+CGG | 0.590490 | 3.3:+95640635 | None:intergenic |
| GCTATAATACCTAAATGTGA+AGG | 0.591073 | 3.3:+95639769 | None:intergenic |
| TAGGTTTCATCTGGCAGAAG+GGG | 0.591697 | 3.3:-95641583 | MS.gene063107:CDS |
| TGCTTAAGCCAGATGCTGAA+GGG | 0.597457 | 3.3:-95640883 | MS.gene063107:CDS |
| CAAGATGTTCTCCAAGGCGA+GGG | 0.604363 | 3.3:+95642116 | None:intergenic |
| CCCTTGAAAATCATGAATGG+AGG | 0.605532 | 3.3:-95640478 | MS.gene063107:CDS |
| ATAAAGTATCCGCCATGATG+AGG | 0.605960 | 3.3:+95640671 | None:intergenic |
| TGGTGAAAGTGCAATAGGCA+GGG | 0.613958 | 3.3:-95641493 | MS.gene063107:CDS |
| TCAAGATGTTCTCCAAGGCG+AGG | 0.629033 | 3.3:+95642115 | None:intergenic |
| ATTAAGACCAGATTTGTGCA+CGG | 0.631492 | 3.3:+95642078 | None:intergenic |
| ATTGCTAAAAGACAACTGGC+CGG | 0.640390 | 3.3:-95639896 | MS.gene063107:intron |
| AACTGGCCGGAATATTATGA+CGG | 0.645214 | 3.3:-95639883 | MS.gene063107:CDS |
| CAAATAACCAGCAATAGACC+AGG | 0.645389 | 3.3:+95639816 | None:intergenic |
| GGATCTCATAGAATCACGGT+GGG | 0.649862 | 3.3:-95640543 | MS.gene063107:CDS |
| CATGATCAAGATGTTCTCCA+AGG | 0.652753 | 3.3:+95642110 | None:intergenic |
| ATTCTCATCAGAATTGTCCA+AGG | 0.653274 | 3.3:+95641946 | None:intergenic |
| TTATGGATCTCATAGAATCA+CGG | 0.654471 | 3.3:-95640547 | MS.gene063107:CDS |
| GATTTCATGCCTCATCATGG+CGG | 0.677929 | 3.3:-95640680 | MS.gene063107:CDS |
| ACTAGATGGAGTTACCACAA+TGG | 0.679491 | 3.3:-95640428 | MS.gene063107:CDS |
| ATGAGACCAATCTATTGGAG+GGG | 0.687920 | 3.3:+95642336 | None:intergenic |
| AAATTGCTATGCAATTACCA+AGG | 0.691776 | 3.3:+95640606 | None:intergenic |
| ATAGATTGGTCTCATCACAA+TGG | 0.702971 | 3.3:-95642328 | MS.gene063107:CDS |
| TAGATGGAGTTACCACAATG+GGG | 0.708965 | 3.3:-95640426 | MS.gene063107:CDS |
| TGGATCTCATAGAATCACGG+TGG | 0.714752 | 3.3:-95640544 | MS.gene063107:CDS |
| AGATGGAGTTACCACAATGG+GGG | 0.717268 | 3.3:-95640425 | MS.gene063107:CDS |
| AATTACCAAGGCAAAACCAG+CGG | 0.718732 | 3.3:+95640618 | None:intergenic |
| TTCACCACGAAAATGTACCA+AGG | 0.730398 | 3.3:+95641988 | None:intergenic |
| ACGGTGGGAAGAATTAATTG+GGG | 0.783541 | 3.3:-95640528 | MS.gene063107:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATTTTTTTAA+TGG | - | chr3.3:95640196-95640215 | MS.gene063107:intron | 0.0% |
| !! | ATTTATAATTTATGATTTCA+GGG | - | chr3.3:95641083-95641102 | MS.gene063107:intron | 10.0% |
| !! | TATTTATAATTTATGATTTC+AGG | - | chr3.3:95641082-95641101 | MS.gene063107:intron | 10.0% |
| !! | ATAAAAAATGAAGTAAGAAA+TGG | + | chr3.3:95641065-95641084 | None:intergenic | 15.0% |
| !! | TGATATAAATTTACAAAGTT+GGG | + | chr3.3:95640870-95640889 | None:intergenic | 15.0% |
| !! | AATGGATGGAAAAATATAAA+AGG | + | chr3.3:95640284-95640303 | None:intergenic | 20.0% |
| !! | GATATAAATTTACAAAGTTG+GGG | + | chr3.3:95640869-95640888 | None:intergenic | 20.0% |
| !! | GTGATATAAATTTACAAAGT+TGG | + | chr3.3:95640871-95640890 | None:intergenic | 20.0% |
| !! | TGAAATTGTACGAAAAAAAA+AGG | + | chr3.3:95640166-95640185 | None:intergenic | 20.0% |
| !!! | AAATTCTCTTCTTTTTTTTC+TGG | + | chr3.3:95641981-95642000 | None:intergenic | 20.0% |
| !!! | CTTTTTAAATATGGTGATAT+TGG | - | chr3.3:95642035-95642054 | MS.gene063107:CDS | 20.0% |
| !!! | TAGCATTTGCTTTTTAAATA+TGG | - | chr3.3:95642026-95642045 | MS.gene063107:CDS | 20.0% |
| ! | AAACTCTATCATTTCAAACT+AGG | - | chr3.3:95641907-95641926 | MS.gene063107:intron | 25.0% |
| ! | AACAATGCTTGAATTTCAAT+TGG | + | chr3.3:95641122-95641141 | None:intergenic | 25.0% |
| ! | AGAAAATTCTTAACAATGTC+TGG | + | chr3.3:95640409-95640428 | None:intergenic | 25.0% |
| ! | ATGAAATCAAAAATCCAATC+TGG | + | chr3.3:95641362-95641381 | None:intergenic | 25.0% |
| ! | TGAGAATCTTAATTATGATC+AGG | - | chr3.3:95640124-95640143 | MS.gene063107:intron | 25.0% |
| !! | AAATATGGTGATATTGGTTA+TGG | - | chr3.3:95642041-95642060 | MS.gene063107:CDS | 25.0% |
| !! | ATTGTTATTCTCATTCACTT+TGG | + | chr3.3:95640960-95640979 | None:intergenic | 25.0% |
| !!! | AACTCCATCTAGTATTTTTT+GGG | + | chr3.3:95641619-95641638 | None:intergenic | 25.0% |
| !!! | TAACTCCATCTAGTATTTTT+TGG | + | chr3.3:95641620-95641639 | None:intergenic | 25.0% |
| !!! | TTGAGTTTTGATTTTTACAC+AGG | + | chr3.3:95640906-95640925 | None:intergenic | 25.0% |
| AAAGATTGATAGGTTTCATC+TGG | - | chr3.3:95640462-95640481 | MS.gene063107:CDS | 30.0% | |
| AAAGTCTCTAACAAAAACCT+AGG | + | chr3.3:95640350-95640369 | None:intergenic | 30.0% | |
| AAATGGATAGATTAACGACT+AGG | + | chr3.3:95641048-95641067 | None:intergenic | 30.0% | |
| AAATTGCTATGCAATTACCA+AGG | + | chr3.3:95641451-95641470 | None:intergenic | 30.0% | |
| AATCCAATCTGGTAAAGAAT+CGG | + | chr3.3:95641351-95641370 | None:intergenic | 30.0% | |
| ATTCTAGATATGCTACTACT+AGG | - | chr3.3:95640991-95641010 | MS.gene063107:intron | 30.0% | |
| CAAGTATAATTCCCCATATT+AGG | + | chr3.3:95640325-95640344 | None:intergenic | 30.0% | |
| CATGGGAAAAAAAGATTGAT+AGG | - | chr3.3:95640452-95640471 | MS.gene063107:CDS | 30.0% | |
| GCTATAATACCTAAATGTGA+AGG | + | chr3.3:95642288-95642307 | None:intergenic | 30.0% | |
| TCAATGAGTGAACTATCAAT+AGG | - | chr3.3:95639876-95639895 | MS.gene063107:CDS | 30.0% | |
| TCATCATTAAACAAATGCAG+TGG | - | chr3.3:95641749-95641768 | MS.gene063107:intron | 30.0% | |
| TTATGGATCTCATAGAATCA+CGG | - | chr3.3:95641507-95641526 | MS.gene063107:CDS | 30.0% | |
| TTTATTCATAATCTACTGCC+TGG | - | chr3.3:95640799-95640818 | MS.gene063107:CDS | 30.0% | |
| ! | AATTCAAGCATTGTTCTTCA+TGG | - | chr3.3:95641127-95641146 | MS.gene063107:intron | 30.0% |
| ! | CTAAAGTATTAGATAAGCCA+AGG | - | chr3.3:95639814-95639833 | MS.gene063107:CDS | 30.0% |
| ! | TATGTTATGGTTTTTGTCTG+CGG | - | chr3.3:95642074-95642093 | MS.gene063107:CDS | 30.0% |
| ! | TTATGATTTCAGGGTGTTTA+TGG | - | chr3.3:95641092-95641111 | MS.gene063107:intron | 30.0% |
| !! | ATCATCAATGCTTATTTTCC+AGG | + | chr3.3:95640820-95640839 | None:intergenic | 30.0% |
| !! | GGAAAATAAGCATTGATGAT+AGG | - | chr3.3:95640820-95640839 | MS.gene063107:CDS | 30.0% |
| !! | TAACTTTGAAGTCCCTAATA+TGG | - | chr3.3:95640228-95640247 | MS.gene063107:intron | 30.0% |
| !!! | TTTTAAGGTATTCCATGATC+CGG | - | chr3.3:95640507-95640526 | MS.gene063107:CDS | 30.0% |
| AACAAATGCAGTGGAAACAT+AGG | - | chr3.3:95641758-95641777 | MS.gene063107:intron | 35.0% | |
| ATAATTGCAACTGACTGTTC+AGG | + | chr3.3:95641491-95641510 | None:intergenic | 35.0% | |
| ATCCAATCTGGTAAAGAATC+GGG | + | chr3.3:95641350-95641369 | None:intergenic | 35.0% | |
| ATTAAGACCAGATTTGTGCA+CGG | + | chr3.3:95639979-95639998 | None:intergenic | 35.0% | |
| ATTCTCATCAGAATTGTCCA+AGG | + | chr3.3:95640111-95640130 | None:intergenic | 35.0% | |
| CATAGGAAACTCAAAATGGA+TGG | + | chr3.3:95640298-95640317 | None:intergenic | 35.0% | |
| CTGTATGATTGATCGTAGAA+TGG | - | chr3.3:95640762-95640781 | MS.gene063107:CDS | 35.0% | |
| GCTTCTCATATGATAGCTTA+AGG | + | chr3.3:95641234-95641253 | None:intergenic | 35.0% | |
| GTGACCCAAAAAATACTAGA+TGG | - | chr3.3:95641612-95641631 | MS.gene063107:CDS | 35.0% | |
| TGAACAGTCAGTTGCAATTA+TGG | - | chr3.3:95641490-95641509 | MS.gene063107:CDS | 35.0% | |
| TGCTCAAGAGATCAAATTCA+TGG | - | chr3.3:95642340-95642359 | MS.gene063107:CDS | 35.0% | |
| TGGAATACCTTAAAACTAGC+AGG | + | chr3.3:95640502-95640521 | None:intergenic | 35.0% | |
| TGGTGGTTACAGTTATGTTA+TGG | - | chr3.3:95642061-95642080 | MS.gene063107:CDS | 35.0% | |
| TGTGTTCCGTCATAATATTC+CGG | + | chr3.3:95642180-95642199 | None:intergenic | 35.0% | |
| TTCACCAAAATCTGCTATCA+AGG | + | chr3.3:95640548-95640567 | None:intergenic | 35.0% | |
| TTGTGATGAGACCAATCTAT+TGG | + | chr3.3:95639726-95639745 | None:intergenic | 35.0% | |
| TTGTTCTGCGAAATTCAGAA+TGG | + | chr3.3:95641680-95641699 | None:intergenic | 35.0% | |
| ! | CAACTTTACTATGTGCTGAT+GGG | - | chr3.3:95640737-95640756 | MS.gene063107:CDS | 35.0% |
| ! | CCTCCATTCATGATTTTCAA+GGG | + | chr3.3:95641579-95641598 | None:intergenic | 35.0% |
| ! | CTTGATGATCCTTCACATTT+AGG | - | chr3.3:95642276-95642295 | MS.gene063107:CDS | 35.0% |
| ! | GAATATTATGACGGAACACA+TGG | - | chr3.3:95642180-95642199 | MS.gene063107:CDS | 35.0% |
| ! | TATGGTGATATTGGTTATGG+TGG | - | chr3.3:95642044-95642063 | MS.gene063107:CDS | 35.0% |
| ! | TCCTCCATTCATGATTTTCA+AGG | + | chr3.3:95641580-95641599 | None:intergenic | 35.0% |
| ! | TTTGATTTCATGCCTCATCA+TGG | - | chr3.3:95641371-95641390 | MS.gene063107:CDS | 35.0% |
| !! | ATAGATTGGTCTCATCACAA+TGG | - | chr3.3:95639726-95639745 | MS.gene063107:CDS | 35.0% |
| !! | ATCATATGAGAAGCCACTTT+TGG | - | chr3.3:95641240-95641259 | MS.gene063107:intron | 35.0% |
| !! | ATCATGGCGGATACTTTATT+GGG | - | chr3.3:95641387-95641406 | MS.gene063107:CDS | 35.0% |
| !! | GAAACCTTGATAGCAGATTT+TGG | - | chr3.3:95640541-95640560 | MS.gene063107:CDS | 35.0% |
| !! | GATTTTGGTGAAAGTGCAAT+AGG | - | chr3.3:95640556-95640575 | MS.gene063107:CDS | 35.0% |
| !!! | CATCCATTTTGAGTTTCCTA+TGG | - | chr3.3:95640296-95640315 | MS.gene063107:intron | 35.0% |
| AACTGGCCGGAATATTATGA+CGG | - | chr3.3:95642171-95642190 | MS.gene063107:CDS | 40.0% | |
| AATCTGCTATCAAGGTTTCG+CGG | + | chr3.3:95640540-95640559 | None:intergenic | 40.0% | |
| AATTACCAAGGCAAAACCAG+CGG | + | chr3.3:95641439-95641458 | None:intergenic | 40.0% | |
| ACGGTGGGAAGAATTAATTG+GGG | - | chr3.3:95641526-95641545 | MS.gene063107:CDS | 40.0% | |
| ACTAGATGGAGTTACCACAA+TGG | - | chr3.3:95641626-95641645 | MS.gene063107:CDS | 40.0% | |
| AGACTCTTCGTCTTCAATCA+TGG | - | chr3.3:95640434-95640453 | MS.gene063107:CDS | 40.0% | |
| AGCATGACAAGGTCCATATT+AGG | + | chr3.3:95640244-95640263 | None:intergenic | 40.0% | |
| ATAGGTTTCATCTGGCAGAA+GGG | - | chr3.3:95640470-95640489 | MS.gene063107:CDS | 40.0% | |
| ATGAGACCAATCTATTGGAG+GGG | + | chr3.3:95639721-95639740 | None:intergenic | 40.0% | |
| ATTAGCCAGTCTCCAAACAA+GGG | - | chr3.3:95641944-95641963 | MS.gene063107:CDS | 40.0% | |
| ATTGCTAAAAGACAACTGGC+CGG | - | chr3.3:95642158-95642177 | MS.gene063107:CDS | 40.0% | |
| CAAATAACCAGCAATAGACC+AGG | + | chr3.3:95642241-95642260 | None:intergenic | 40.0% | |
| CACCAAAATCCAGAATCAAC+AGG | + | chr3.3:95640592-95640611 | None:intergenic | 40.0% | |
| CACGGTGGGAAGAATTAATT+GGG | - | chr3.3:95641525-95641544 | MS.gene063107:CDS | 40.0% | |
| CAGCCCTTGAAAATCATGAA+TGG | - | chr3.3:95641573-95641592 | MS.gene063107:CDS | 40.0% | |
| CATGAATGGAGGATCATAAC+AGG | - | chr3.3:95641587-95641606 | MS.gene063107:CDS | 40.0% | |
| CATGATCAAGATGTTCTCCA+AGG | + | chr3.3:95639947-95639966 | None:intergenic | 40.0% | |
| CCAACTTTACTATGTGCTGA+TGG | - | chr3.3:95640736-95640755 | MS.gene063107:CDS | 40.0% | |
| CCAGATTGCTAAAAGACAAC+TGG | - | chr3.3:95642154-95642173 | MS.gene063107:CDS | 40.0% | |
| CCATCAGCACATAGTAAAGT+TGG | + | chr3.3:95640739-95640758 | None:intergenic | 40.0% | |
| CCCTTGAAAATCATGAATGG+AGG | - | chr3.3:95641576-95641595 | MS.gene063107:CDS | 40.0% | |
| CCTCCATAGGAAACTCAAAA+TGG | + | chr3.3:95640302-95640321 | None:intergenic | 40.0% | |
| CGTGCATACACAAAATCTAC+AGG | - | chr3.3:95640625-95640644 | MS.gene063107:CDS | 40.0% | |
| CTAGATGGAGTTACCACAAT+GGG | - | chr3.3:95641627-95641646 | MS.gene063107:CDS | 40.0% | |
| CTCTCAATGTTCAAAGTCCT+TGG | + | chr3.3:95639834-95639853 | None:intergenic | 40.0% | |
| CTGAGTTTATGCTTGTCAGA+GGG | - | chr3.3:95640700-95640719 | MS.gene063107:CDS | 40.0% | |
| CTTTATTGGGAATGTGAGTC+CGG | - | chr3.3:95641400-95641419 | MS.gene063107:CDS | 40.0% | |
| GAACACATGGTCGATACATT+GGG | - | chr3.3:95642193-95642212 | MS.gene063107:CDS | 40.0% | |
| GAATTTGATCTCTTGAGCAC+AGG | + | chr3.3:95642339-95642358 | None:intergenic | 40.0% | |
| GACTCTTCGTCTTCAATCAT+GGG | - | chr3.3:95640435-95640454 | MS.gene063107:CDS | 40.0% | |
| GATGAGACCAATCTATTGGA+GGG | + | chr3.3:95639722-95639741 | None:intergenic | 40.0% | |
| GCATGACAAGGTCCATATTA+GGG | + | chr3.3:95640243-95640262 | None:intergenic | 40.0% | |
| GCTGGATAACAAACTTTGAC+AGG | + | chr3.3:95641557-95641576 | None:intergenic | 40.0% | |
| GCTTCAAATCCAACCAAAAG+TGG | + | chr3.3:95641256-95641275 | None:intergenic | 40.0% | |
| TAATATGGACCTTGTCATGC+TGG | - | chr3.3:95640243-95640262 | MS.gene063107:intron | 40.0% | |
| TACTCCAAGATCACTGCTAT+TGG | - | chr3.3:95639998-95640017 | MS.gene063107:intron | 40.0% | |
| TAGATGGAGTTACCACAATG+GGG | - | chr3.3:95641628-95641647 | MS.gene063107:CDS | 40.0% | |
| TATTAGCCAGTCTCCAAACA+AGG | - | chr3.3:95641943-95641962 | MS.gene063107:CDS | 40.0% | |
| TCACGGTGGGAAGAATTAAT+TGG | - | chr3.3:95641524-95641543 | MS.gene063107:CDS | 40.0% | |
| TCTGAGTTTATGCTTGTCAG+AGG | - | chr3.3:95640699-95640718 | MS.gene063107:CDS | 40.0% | |
| TGAGTTTATGCTTGTCAGAG+GGG | - | chr3.3:95640701-95640720 | MS.gene063107:CDS | 40.0% | |
| TGATGAGACCAATCTATTGG+AGG | + | chr3.3:95639723-95639742 | None:intergenic | 40.0% | |
| TGCTGAAGGGAAAGAGTTTA+TGG | - | chr3.3:95641184-95641203 | MS.gene063107:intron | 40.0% | |
| TGGTCTCATCACAATGGTAA+TGG | - | chr3.3:95639732-95639751 | MS.gene063107:CDS | 40.0% | |
| TTAAGACCAGATTTGTGCAC+GGG | + | chr3.3:95639978-95639997 | None:intergenic | 40.0% | |
| TTCACCACGAAAATGTACCA+AGG | + | chr3.3:95640069-95640088 | None:intergenic | 40.0% | |
| TTCCCGATTCTTTACCAGAT+TGG | - | chr3.3:95641345-95641364 | MS.gene063107:CDS | 40.0% | |
| TTCCTATGGAGGCCTAATAT+GGG | - | chr3.3:95640310-95640329 | MS.gene063107:intron | 40.0% | |
| TTTCCTATGGAGGCCTAATA+TGG | - | chr3.3:95640309-95640328 | MS.gene063107:intron | 40.0% | |
| ! | AGGGAAGTTGTCAAGTTTTG+AGG | + | chr3.3:95639922-95639941 | None:intergenic | 40.0% |
| ! | ATAAAGTATCCGCCATGATG+AGG | + | chr3.3:95641386-95641405 | None:intergenic | 40.0% |
| ! | ATCAAAAAAGCCAGAGCACT+TGG | + | chr3.3:95640376-95640395 | None:intergenic | 40.0% |
| ! | ATCTGGCTTAAGCAATAGCA+TGG | + | chr3.3:95641165-95641184 | None:intergenic | 40.0% |
| ! | ATTCAATTTTGCCCGAAGCT+TGG | - | chr3.3:95640027-95640046 | MS.gene063107:intron | 40.0% |
| ! | CATAGCAATTTTGTCCTGCT+TGG | - | chr3.3:95641460-95641479 | MS.gene063107:CDS | 40.0% |
| ! | CCAGTTGTCTTTTAGCAATC+TGG | + | chr3.3:95642157-95642176 | None:intergenic | 40.0% |
| ! | CTGGTCTATTGCTGGTTATT+TGG | - | chr3.3:95642239-95642258 | MS.gene063107:CDS | 40.0% |
| ! | GTCTATTGCTGGTTATTTGG+TGG | - | chr3.3:95642242-95642261 | MS.gene063107:CDS | 40.0% |
| ! | TGTGTGTGTACGACTTTTGA+GGG | - | chr3.3:95641711-95641730 | MS.gene063107:intron | 40.0% |
| ! | TTCAATTTTGCCCGAAGCTT+GGG | - | chr3.3:95640028-95640047 | MS.gene063107:intron | 40.0% |
| !! | AAGGGCACGTTTTGCAATTT+GGG | + | chr3.3:95642121-95642140 | None:intergenic | 40.0% |
| !! | AATGGTAGCATAAGAGTACC+TGG | + | chr3.3:95641662-95641681 | None:intergenic | 40.0% |
| !! | CATCATGGCGGATACTTTAT+TGG | - | chr3.3:95641386-95641405 | MS.gene063107:CDS | 40.0% |
| !! | CATTCATGATTTTCAAGGGC+TGG | + | chr3.3:95641575-95641594 | None:intergenic | 40.0% |
| !!! | CCATTTTGAGTTTCCTATGG+AGG | - | chr3.3:95640299-95640318 | MS.gene063107:intron | 40.0% |
| !!! | CTCCTGTTGATTCTGGATTT+TGG | - | chr3.3:95640587-95640606 | MS.gene063107:CDS | 40.0% |
| !!! | CTCTGGCTTTTTTGATGCAT+GGG | - | chr3.3:95640380-95640399 | MS.gene063107:intron | 40.0% |
| !!! | CTGTTGATTCTGGATTTTGG+TGG | - | chr3.3:95640590-95640609 | MS.gene063107:CDS | 40.0% |
| !!! | TATGAGAAGCCACTTTTGGT+TGG | - | chr3.3:95641244-95641263 | MS.gene063107:intron | 40.0% |
| !!! | TCTGGCTTTTTTGATGCATG+GGG | - | chr3.3:95640381-95640400 | MS.gene063107:intron | 40.0% |
| AACCAGCAATAGACCAGGTT+TGG | + | chr3.3:95642236-95642255 | None:intergenic | 45.0% | |
| AACTCTTTCCCTTCAGCATC+TGG | + | chr3.3:95641182-95641201 | None:intergenic | 45.0% | |
| AAGGCAGCAATTGTTCCAAC+TGG | + | chr3.3:95640092-95640111 | None:intergenic | 45.0% | |
| AGACTTTGTTCCAAGTGCTC+TGG | - | chr3.3:95640363-95640382 | MS.gene063107:intron | 45.0% | |
| AGATGGAGTTACCACAATGG+GGG | - | chr3.3:95641629-95641648 | MS.gene063107:CDS | 45.0% | |
| AGATTTGTGCACGGGAGAAA+AGG | + | chr3.3:95639970-95639989 | None:intergenic | 45.0% | |
| AGGCTTATCTCCACGTCTAT+TGG | - | chr3.3:95639896-95639915 | MS.gene063107:intron | 45.0% | |
| AGTTGGAACAATTGCTGCCT+TGG | - | chr3.3:95640091-95640110 | MS.gene063107:intron | 45.0% | |
| ATCTGGCCTCAGCAATTTGA+AGG | + | chr3.3:95642140-95642159 | None:intergenic | 45.0% | |
| GACCAGCCTGAATGTCAAAA+GGG | - | chr3.3:95640664-95640683 | MS.gene063107:CDS | 45.0% | |
| GACTAAATCACGATGACACG+TGG | + | chr3.3:95641887-95641906 | None:intergenic | 45.0% | |
| GAGTCCAATAGCAGTGATCT+TGG | + | chr3.3:95640005-95640024 | None:intergenic | 45.0% | |
| GATAGGTTTCATCTGGCAGA+AGG | - | chr3.3:95640469-95640488 | MS.gene063107:CDS | 45.0% | |
| GATTTCATGCCTCATCATGG+CGG | - | chr3.3:95641374-95641393 | MS.gene063107:CDS | 45.0% | |
| GCATTAGCATAGCCCTTGTT+TGG | + | chr3.3:95641959-95641978 | None:intergenic | 45.0% | |
| GGAACACATGGTCGATACAT+TGG | - | chr3.3:95642192-95642211 | MS.gene063107:CDS | 45.0% | |
| GGATCTCATAGAATCACGGT+GGG | - | chr3.3:95641511-95641530 | MS.gene063107:CDS | 45.0% | |
| GGGGAATTATACTTGTGCCT+AGG | - | chr3.3:95640330-95640349 | MS.gene063107:intron | 45.0% | |
| TAGGTTTCATCTGGCAGAAG+GGG | - | chr3.3:95640471-95640490 | MS.gene063107:CDS | 45.0% | |
| TCCTATGGAGGCCTAATATG+GGG | - | chr3.3:95640311-95640330 | MS.gene063107:intron | 45.0% | |
| TCTGGCCTCAGCAATTTGAA+GGG | + | chr3.3:95642139-95642158 | None:intergenic | 45.0% | |
| TGAAGAAGACCGACAGCTAA+AGG | - | chr3.3:95642311-95642330 | MS.gene063107:CDS | 45.0% | |
| TGACCAGCCTGAATGTCAAA+AGG | - | chr3.3:95640663-95640682 | MS.gene063107:CDS | 45.0% | |
| TGCTTAAGCCAGATGCTGAA+GGG | - | chr3.3:95641171-95641190 | MS.gene063107:intron | 45.0% | |
| TGGATCTCATAGAATCACGG+TGG | - | chr3.3:95641510-95641529 | MS.gene063107:CDS | 45.0% | |
| TTGCTTAAGCCAGATGCTGA+AGG | - | chr3.3:95641170-95641189 | MS.gene063107:intron | 45.0% | |
| ! | AGGGCACGTTTTGCAATTTG+GGG | + | chr3.3:95642120-95642139 | None:intergenic | 45.0% |
| ! | CATTTTCGTGGTGAACCAGT+TGG | - | chr3.3:95640074-95640093 | MS.gene063107:intron | 45.0% |
| ! | CGCATACCCTTTTGACATTC+AGG | + | chr3.3:95640673-95640692 | None:intergenic | 45.0% |
| ! | CGTTCCTTGGTACATTTTCG+TGG | - | chr3.3:95640062-95640081 | MS.gene063107:intron | 45.0% |
| ! | GTGTGTGTGTACGACTTTTG+AGG | - | chr3.3:95641710-95641729 | MS.gene063107:intron | 45.0% |
| ! | GTTATGGTTTTTGTCTGCGG+CGG | - | chr3.3:95642077-95642096 | MS.gene063107:CDS | 45.0% |
| ! | TACCCTTTTGACATTCAGGC+TGG | + | chr3.3:95640669-95640688 | None:intergenic | 45.0% |
| ! | TGGTGAAAGTGCAATAGGCA+GGG | - | chr3.3:95640561-95640580 | MS.gene063107:CDS | 45.0% |
| ! | TTGCTGGTTATTTGGTGGCT+AGG | - | chr3.3:95642247-95642266 | MS.gene063107:CDS | 45.0% |
| ! | TTGGTGAAAGTGCAATAGGC+AGG | - | chr3.3:95640560-95640579 | MS.gene063107:CDS | 45.0% |
| ! | TTTTCTCCCGTGCACAAATC+TGG | - | chr3.3:95639969-95639988 | MS.gene063107:intron | 45.0% |
| !! | GAAGGGCACGTTTTGCAATT+TGG | + | chr3.3:95642122-95642141 | None:intergenic | 45.0% |
| !!! | AGTTTTGAGGCCAATAGACG+TGG | + | chr3.3:95639909-95639928 | None:intergenic | 45.0% |
| !!! | GCTCTGGCTTTTTTGATGCA+TGG | - | chr3.3:95640379-95640398 | MS.gene063107:intron | 45.0% |
| !!! | GGTGATGCCTGCTAGTTTTA+AGG | - | chr3.3:95640492-95640511 | MS.gene063107:CDS | 45.0% |
| AAGGTTTCGCGGTTTCTGAC+CGG | + | chr3.3:95640529-95640548 | None:intergenic | 50.0% | |
| ACCACTGATCCAGCATGACA+AGG | + | chr3.3:95640255-95640274 | None:intergenic | 50.0% | |
| ACCTTGTCATGCTGGATCAG+TGG | - | chr3.3:95640251-95640270 | MS.gene063107:intron | 50.0% | |
| ACGTGCCCTTCAAATTGCTG+AGG | - | chr3.3:95642131-95642150 | MS.gene063107:CDS | 50.0% | |
| AGGCTCGAAAATGCCAAACC+TGG | - | chr3.3:95642220-95642239 | MS.gene063107:CDS | 50.0% | |
| CAAGATGTTCTCCAAGGCGA+GGG | + | chr3.3:95639941-95639960 | None:intergenic | 50.0% | |
| CCAATCTATTGGAGGGGTAG+AGG | + | chr3.3:95639715-95639734 | None:intergenic | 50.0% | |
| CCTCTACCCCTCCAATAGAT+TGG | - | chr3.3:95639712-95639731 | MS.gene063107:CDS | 50.0% | |
| GCACAGGATCCTTTAGCTGT+CGG | + | chr3.3:95642323-95642342 | None:intergenic | 50.0% | |
| GTTACCACAATGGGGGATCT+TGG | - | chr3.3:95641636-95641655 | MS.gene063107:CDS | 50.0% | |
| TCAAGATGTTCTCCAAGGCG+AGG | + | chr3.3:95639942-95639961 | None:intergenic | 50.0% | |
| TCCCCATATTAGGCCTCCAT+AGG | + | chr3.3:95640315-95640334 | None:intergenic | 50.0% | |
| TGCCAAACCTGGTCTATTGC+TGG | - | chr3.3:95642231-95642250 | MS.gene063107:CDS | 50.0% | |
| TGGTCGATACATTGGGAAGC+AGG | - | chr3.3:95642200-95642219 | MS.gene063107:CDS | 50.0% | |
| ! | CATAGCCCTTGTTTGGAGAC+TGG | + | chr3.3:95641952-95641971 | None:intergenic | 50.0% |
| !! | AGGGTTGCTCCTGTTGATTC+TGG | - | chr3.3:95640580-95640599 | MS.gene063107:CDS | 50.0% |
| !! | CTACTACTAGGCACTGACAG+GGG | - | chr3.3:95641003-95641022 | MS.gene063107:intron | 50.0% |
| !! | GCTACTACTAGGCACTGACA+GGG | - | chr3.3:95641002-95641021 | MS.gene063107:intron | 50.0% |
| !! | TGCTACTACTAGGCACTGAC+AGG | - | chr3.3:95641001-95641020 | MS.gene063107:intron | 50.0% |
| !!! | GATTTCCGCTGGTTTTGCCT+TGG | - | chr3.3:95641431-95641450 | MS.gene063107:CDS | 50.0% |
| CAGCGGAAATCCATCCTAGC+CGG | + | chr3.3:95641422-95641441 | None:intergenic | 55.0% | |
| CCTGAGAGCTTCCCAAGCTT+CGG | + | chr3.3:95640042-95640061 | None:intergenic | 55.0% | |
| CTGAGAGCTTCCCAAGCTTC+GGG | + | chr3.3:95640041-95640060 | None:intergenic | 55.0% | |
| CTGTTCAGGAGTTGCCAAGC+AGG | + | chr3.3:95641477-95641496 | None:intergenic | 55.0% | |
| CTTGACAACTTCCCTCGCCT+TGG | - | chr3.3:95639927-95639946 | MS.gene063107:intron | 55.0% | |
| GAATGTGAGTCCGGCTAGGA+TGG | - | chr3.3:95641409-95641428 | MS.gene063107:CDS | 55.0% | |
| TTGGGAATGTGAGTCCGGCT+AGG | - | chr3.3:95641405-95641424 | MS.gene063107:CDS | 55.0% | |
| CACAATGGGGGATCTTGGCC+AGG | - | chr3.3:95641641-95641660 | MS.gene063107:CDS | 60.0% | |
| CCGAAGCTTGGGAAGCTCTC+AGG | - | chr3.3:95640039-95640058 | MS.gene063107:intron | 60.0% | |
| CGCGGTTTCTGACCGGATCA+TGG | + | chr3.3:95640522-95640541 | None:intergenic | 60.0% | |
| CTGCGGCGGCTATCAAGACT+GGG | - | chr3.3:95642091-95642110 | MS.gene063107:CDS | 60.0% | |
| CTGGCCAAGATCCCCCATTG+TGG | + | chr3.3:95641643-95641662 | None:intergenic | 60.0% | |
| GGAAGCTCTCAGGCGTTCCT+TGG | - | chr3.3:95640049-95640068 | MS.gene063107:intron | 60.0% | |
| TCTGCGGCGGCTATCAAGAC+TGG | - | chr3.3:95642090-95642109 | MS.gene063107:CDS | 60.0% | |
| ! | CGGCTAGGATGGATTTCCGC+TGG | - | chr3.3:95641420-95641439 | MS.gene063107:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 95639705 | 95642371 | 95639705 | ID=MS.gene063107 |
| chr3.3 | mRNA | 95639705 | 95642371 | 95639705 | ID=MS.gene063107.t1;Parent=MS.gene063107 |
| chr3.3 | exon | 95641931 | 95642371 | 95641931 | ID=MS.gene063107.t1.exon1;Parent=MS.gene063107.t1 |
| chr3.3 | CDS | 95641931 | 95642371 | 95641931 | ID=cds.MS.gene063107.t1;Parent=MS.gene063107.t1 |
| chr3.3 | exon | 95641293 | 95641724 | 95641293 | ID=MS.gene063107.t1.exon2;Parent=MS.gene063107.t1 |
| chr3.3 | CDS | 95641293 | 95641724 | 95641293 | ID=cds.MS.gene063107.t1;Parent=MS.gene063107.t1 |
| chr3.3 | exon | 95640414 | 95640972 | 95640414 | ID=MS.gene063107.t1.exon3;Parent=MS.gene063107.t1 |
| chr3.3 | CDS | 95640414 | 95640972 | 95640414 | ID=cds.MS.gene063107.t1;Parent=MS.gene063107.t1 |
| chr3.3 | exon | 95639705 | 95639907 | 95639705 | ID=MS.gene063107.t1.exon4;Parent=MS.gene063107.t1 |
| chr3.3 | CDS | 95639705 | 95639907 | 95639705 | ID=cds.MS.gene063107.t1;Parent=MS.gene063107.t1 |
| Gene Sequence |
| Protein sequence |
