Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063136.t1 | XP_003603985.1 | 99.5 | 217 | 1 | 0 | 1 | 217 | 1 | 217 | 8.90E-125 | 456.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063136.t1 | Q9FEN9 | 70.2 | 215 | 61 | 2 | 1 | 215 | 1 | 212 | 1.5e-88 | 327.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063136.t1 | G7J7R0 | 99.5 | 217 | 1 | 0 | 1 | 217 | 1 | 217 | 6.4e-125 | 456.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063136.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063136 | MS.gene58386 | PPI |
| MS.gene059748 | MS.gene063136 | PPI |
| MS.gene063136 | MS.gene062590 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063136.t1 | MTR_3g117270 | 99.539 | 217 | 1 | 0 | 1 | 217 | 1 | 217 | 1.18e-165 | 457 |
| MS.gene063136.t1 | MTR_3g117270 | 99.052 | 211 | 2 | 0 | 1 | 211 | 1 | 211 | 2.64e-160 | 444 |
| MS.gene063136.t1 | MTR_3g117270 | 99.394 | 165 | 1 | 0 | 1 | 165 | 1 | 165 | 1.21e-123 | 349 |
| MS.gene063136.t1 | MTR_3g117270 | 99.390 | 164 | 1 | 0 | 1 | 164 | 1 | 164 | 2.29e-122 | 346 |
| MS.gene063136.t1 | MTR_2g078310 | 67.431 | 218 | 67 | 3 | 1 | 217 | 1 | 215 | 6.41e-103 | 298 |
| MS.gene063136.t1 | MTR_3g117280 | 70.854 | 199 | 54 | 1 | 19 | 217 | 1 | 195 | 6.60e-103 | 298 |
| MS.gene063136.t1 | MTR_2g090365 | 50.521 | 192 | 87 | 5 | 1 | 190 | 263 | 448 | 2.10e-59 | 195 |
| MS.gene063136.t1 | MTR_5g097190 | 45.968 | 124 | 58 | 4 | 74 | 188 | 15 | 138 | 7.30e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063136.t1 | AT4G39100 | 70.233 | 215 | 61 | 2 | 1 | 215 | 1 | 212 | 3.67e-114 | 328 |
| MS.gene063136.t1 | AT4G22140 | 67.281 | 217 | 67 | 3 | 2 | 217 | 10 | 223 | 2.74e-109 | 315 |
| MS.gene063136.t1 | AT4G22140 | 67.299 | 211 | 65 | 3 | 2 | 211 | 10 | 217 | 1.07e-105 | 306 |
| MS.gene063136.t1 | AT4G22140 | 67.299 | 211 | 65 | 3 | 2 | 211 | 10 | 217 | 1.07e-105 | 306 |
| MS.gene063136.t1 | AT4G39100 | 76.364 | 165 | 37 | 1 | 1 | 165 | 1 | 163 | 6.21e-95 | 276 |
| MS.gene063136.t1 | AT4G04260 | 62.162 | 185 | 66 | 3 | 28 | 210 | 9 | 191 | 1.06e-77 | 234 |
| MS.gene063136.t1 | AT4G04260 | 61.111 | 180 | 66 | 3 | 33 | 210 | 1 | 178 | 1.84e-73 | 223 |
| MS.gene063136.t1 | AT4G04260 | 71.186 | 118 | 33 | 1 | 25 | 142 | 24 | 140 | 8.55e-57 | 179 |
Find 57 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAACATGTCGGGATATTT+TGG | 0.173922 | 3.4:-99671734 | None:intergenic |
| ATGACTCTAGGTTTCGCTTT+GGG | 0.256713 | 3.4:-99667394 | None:intergenic |
| AGGTTTCGCTTTGGGGCTTT+TGG | 0.301619 | 3.4:-99667386 | None:intergenic |
| CTTTGCCACGTAAGAGGGTT+TGG | 0.340256 | 3.4:-99667572 | None:intergenic |
| GAAGGAAAGTGTATTGTTCA+TGG | 0.347757 | 3.4:+99667754 | MS.gene063136:CDS |
| AAAGAAGTGGTCAAGTCTTT+CGG | 0.363321 | 3.4:-99670210 | None:intergenic |
| ACTCACACTGCAACTCTATC+AGG | 0.365443 | 3.4:-99667865 | None:intergenic |
| TTAACGTCCGGTGGTATTAC+CGG | 0.372519 | 3.4:+99667638 | MS.gene063136:CDS |
| CACTGAACCATCAGATCATC+AGG | 0.376018 | 3.4:-99668648 | None:intergenic |
| TGTGAAAGTTGTTCCGTTGA+AGG | 0.381340 | 3.4:+99670233 | MS.gene063136:CDS |
| CATCAGATCATCAGGGTTGT+AGG | 0.418034 | 3.4:-99668640 | None:intergenic |
| TTCGATCTTTGCCACGTAAG+AGG | 0.444854 | 3.4:-99667578 | None:intergenic |
| TATGACTCTAGGTTTCGCTT+TGG | 0.453882 | 3.4:-99667395 | None:intergenic |
| ATAGAGGATGATGCCACATC+TGG | 0.463776 | 3.4:-99671823 | None:intergenic |
| TTTGAGTACAATTCTGCTAC+TGG | 0.478917 | 3.4:+99667832 | MS.gene063136:CDS |
| CAGAGTGCTGATACAATTGA+AGG | 0.496733 | 3.4:+99667736 | MS.gene063136:CDS |
| AGTGTGAGGGCTGCAGTGAC+TGG | 0.500549 | 3.4:+99668667 | MS.gene063136:CDS |
| TCGATCTTTGCCACGTAAGA+GGG | 0.507398 | 3.4:-99667577 | None:intergenic |
| TGACTCTAGGTTTCGCTTTG+GGG | 0.508250 | 3.4:-99667393 | None:intergenic |
| GCCACGTAAGAGGGTTTGGA+TGG | 0.509773 | 3.4:-99667568 | None:intergenic |
| GAGACAGTTTCACGGTTCAA+AGG | 0.514600 | 3.4:+99667684 | MS.gene063136:CDS |
| TACCGGCCGGAGGAGTCAAT+TGG | 0.521187 | 3.4:+99667655 | MS.gene063136:CDS |
| TATTCCAGATAAAACATGTC+GGG | 0.522239 | 3.4:-99671743 | None:intergenic |
| AACAAATCTGTCACAATCAA+AGG | 0.523901 | 3.4:+99667434 | MS.gene063136:CDS |
| ATCAGATCATCAGGGTTGTA+GGG | 0.525800 | 3.4:-99668639 | None:intergenic |
| CGGCCACCAATTGACTCCTC+CGG | 0.542045 | 3.4:-99667661 | None:intergenic |
| CTACAACCCTGATGATCTGA+TGG | 0.544719 | 3.4:+99668641 | MS.gene063136:CDS |
| TGATCTGATGGTTCAGTGTG+AGG | 0.546259 | 3.4:+99668653 | MS.gene063136:CDS |
| CGGCCGGAGGAGTCAATTGG+TGG | 0.557866 | 3.4:+99667658 | MS.gene063136:CDS |
| GAGGGTTTGGATGGATCAGA+TGG | 0.563022 | 3.4:-99667559 | None:intergenic |
| TACACTAAGCTTGATGCTGT+TGG | 0.564424 | 3.4:+99667787 | MS.gene063136:CDS |
| CGGAGGAGTCAATTGGTGGC+CGG | 0.567621 | 3.4:+99667662 | MS.gene063136:CDS |
| GTTTGACTGAGTATGACTCT+AGG | 0.568800 | 3.4:-99667406 | None:intergenic |
| GGTGGCCGGAGACAGTTTCA+CGG | 0.570440 | 3.4:+99667676 | MS.gene063136:CDS |
| TAACAGTCTTAATGACATAG+AGG | 0.576309 | 3.4:-99671839 | None:intergenic |
| ACAGTCATGTCTATACAAGC+AGG | 0.584679 | 3.4:-99670179 | None:intergenic |
| CACCAATTGACTCCTCCGGC+CGG | 0.585767 | 3.4:-99667657 | None:intergenic |
| TCTTACGTGGCAAAGATCGA+AGG | 0.586509 | 3.4:+99667580 | MS.gene063136:CDS |
| TGGATACTAAACGCCGCCGA+AGG | 0.592385 | 3.4:+99671013 | MS.gene063136:CDS |
| AACAACTTTCACAAAAGAAG+TGG | 0.593717 | 3.4:-99670223 | None:intergenic |
| TTGAACCGTGAAACTGTCTC+CGG | 0.596615 | 3.4:-99667681 | None:intergenic |
| GATCTGATGGTTCAGTGTGA+GGG | 0.605136 | 3.4:+99668654 | MS.gene063136:CDS |
| CCTCCGGCCGGTAATACCAC+CGG | 0.617818 | 3.4:-99667645 | None:intergenic |
| CTAACGTTAAAGTTAACGTC+CGG | 0.628228 | 3.4:+99667626 | MS.gene063136:CDS |
| TACAAGACTCGCAGATACAA+AGG | 0.635448 | 3.4:+99670286 | MS.gene063136:CDS |
| GAAAATCTGAAATTACCCGT+TGG | 0.639880 | 3.4:+99671711 | MS.gene063136:CDS |
| ATATTCCAGATAAAACATGT+CGG | 0.642518 | 3.4:-99671744 | None:intergenic |
| CGTCCGGTGGTATTACCGGC+CGG | 0.645283 | 3.4:+99667642 | MS.gene063136:CDS |
| CTTACGTGGCAAAGATCGAA+GGG | 0.647189 | 3.4:+99667581 | MS.gene063136:CDS |
| TCCATCCAAACCCTCTTACG+TGG | 0.664323 | 3.4:+99667567 | MS.gene063136:CDS |
| CCGGTGGTATTACCGGCCGG+AGG | 0.671639 | 3.4:+99667645 | MS.gene063136:CDS |
| ACGTTAAAGTTAACGTCCGG+TGG | 0.681208 | 3.4:+99667629 | MS.gene063136:CDS |
| TTGTATAGACATGACTGTGG+AGG | 0.686994 | 3.4:+99670184 | MS.gene063136:CDS |
| GGGATCGAAGCTGATTCACG+AGG | 0.707404 | 3.4:+99667601 | MS.gene063136:CDS |
| ACTGAACCATCAGATCATCA+GGG | 0.710984 | 3.4:-99668647 | None:intergenic |
| AACATCGCTTCTACCTTCGG+CGG | 0.747293 | 3.4:-99671026 | None:intergenic |
| TGCTTGTATAGACATGACTG+TGG | 0.776325 | 3.4:+99670181 | MS.gene063136:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATGTGAAATTAAA+AGG | + | chr3.4:99671451-99671470 | MS.gene063136:intron | 10.0% |
| !! | AAATTAATGTGAAATTAAAA+GGG | + | chr3.4:99671452-99671471 | MS.gene063136:intron | 10.0% |
| !! | TCTTTATAATAACATAATAA+AGG | - | chr3.4:99670791-99670810 | None:intergenic | 10.0% |
| !!! | AATTAATTTAGATTATGTTT+TGG | + | chr3.4:99668027-99668046 | MS.gene063136:intron | 10.0% |
| !!! | ATTTTATTACTTACTTTTAT+TGG | + | chr3.4:99669971-99669990 | MS.gene063136:intron | 10.0% |
| !! | CCATTTATATTCATTTAAAT+AGG | - | chr3.4:99669368-99669387 | None:intergenic | 15.0% |
| !! | CCTATTTAAATGAATATAAA+TGG | + | chr3.4:99669365-99669384 | MS.gene063136:intron | 15.0% |
| !! | TATTTATAAACCATGATAAA+TGG | + | chr3.4:99670016-99670035 | MS.gene063136:intron | 15.0% |
| !!! | AAACAATAATAATTCTAGTT+AGG | + | chr3.4:99669317-99669336 | MS.gene063136:intron | 15.0% |
| !!! | TTTTTTTAAAATGACAAAAG+TGG | - | chr3.4:99668193-99668212 | None:intergenic | 15.0% |
| !! | AAAATCTATCTTTCTATCTA+AGG | - | chr3.4:99669866-99669885 | None:intergenic | 20.0% |
| !! | AAATATGCTCAAACAAATTA+AGG | + | chr3.4:99669640-99669659 | MS.gene063136:intron | 20.0% |
| !! | AAATCAGATATTAACTTAGA+TGG | - | chr3.4:99671593-99671612 | None:intergenic | 20.0% |
| !! | AAGTAATAAAATGTCATACA+AGG | - | chr3.4:99669963-99669982 | None:intergenic | 20.0% |
| !! | AATAAACAGTTTAACAAGTT+GGG | - | chr3.4:99669916-99669935 | None:intergenic | 20.0% |
| !! | AATATGCTCAAACAAATTAA+GGG | + | chr3.4:99669641-99669660 | MS.gene063136:intron | 20.0% |
| !! | ACATAAATTAACCCAAAAAA+AGG | - | chr3.4:99670618-99670637 | None:intergenic | 20.0% |
| !! | ATCAAAAGAAACATAATTCT+CGG | - | chr3.4:99669187-99669206 | None:intergenic | 20.0% |
| !! | ATTATACTTGTAATTGTTCA+TGG | + | chr3.4:99669205-99669224 | MS.gene063136:intron | 20.0% |
| !! | ATTGCAATTACTTGTATAAA+TGG | - | chr3.4:99671524-99671543 | None:intergenic | 20.0% |
| !! | GAAAAACAAAAAAAATCCTT+TGG | + | chr3.4:99671779-99671798 | MS.gene063136:CDS | 20.0% |
| !! | GTTATTGCAAAATAGAATTT+GGG | + | chr3.4:99668110-99668129 | MS.gene063136:intron | 20.0% |
| !! | TAATAAACAGTTTAACAAGT+TGG | - | chr3.4:99669917-99669936 | None:intergenic | 20.0% |
| !! | TGTTATTGCAAAATAGAATT+TGG | + | chr3.4:99668109-99668128 | MS.gene063136:intron | 20.0% |
| !! | TTCTATATGAGAATATAACT+AGG | + | chr3.4:99670475-99670494 | MS.gene063136:intron | 20.0% |
| !!! | AGAAAACAAGTATTTTAAGT+CGG | + | chr3.4:99668830-99668849 | MS.gene063136:intron | 20.0% |
| !!! | AGACAATAATAATTCTAGTT+AGG | + | chr3.4:99669254-99669273 | MS.gene063136:intron | 20.0% |
| !!! | ATTAGTGCTTATATTTTGTT+TGG | + | chr3.4:99670981-99671000 | MS.gene063136:intron | 20.0% |
| !!! | ATTTCACATTAATTTTAGTG+TGG | - | chr3.4:99671447-99671466 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTGTTTTTCTGTC+TGG | - | chr3.4:99671775-99671794 | None:intergenic | 20.0% |
| !!! | TAAAGATATGATTTTTGTGT+TGG | + | chr3.4:99667932-99667951 | MS.gene063136:intron | 20.0% |
| !!! | TATAAATGGAGTATCAAATA+TGG | - | chr3.4:99671510-99671529 | None:intergenic | 20.0% |
| !!! | TATATTTTGTTTGGTATTGT+AGG | + | chr3.4:99670990-99671009 | MS.gene063136:intron | 20.0% |
| !!! | TGTTTTCTTGTAAATTTTTC+TGG | + | chr3.4:99670936-99670955 | MS.gene063136:intron | 20.0% |
| ! | AAAATGTAGACCAAATATAG+TGG | - | chr3.4:99670756-99670775 | None:intergenic | 25.0% |
| ! | AAAGAGAAAGAGAAAATTAG+AGG | - | chr3.4:99667489-99667508 | None:intergenic | 25.0% |
| ! | AAATGTAGACCAAATATAGT+GGG | - | chr3.4:99670755-99670774 | None:intergenic | 25.0% |
| ! | AAGATATCAAAGATCTTAAG+TGG | - | chr3.4:99670388-99670407 | None:intergenic | 25.0% |
| ! | AAGCATAATATTTGTGATTC+AGG | + | chr3.4:99670150-99670169 | MS.gene063136:intron | 25.0% |
| ! | AAGGAGCAAATAATAGATTT+CGG | - | chr3.4:99668260-99668279 | None:intergenic | 25.0% |
| ! | ACTACGAATTGAATATATGA+TGG | + | chr3.4:99669405-99669424 | MS.gene063136:intron | 25.0% |
| ! | ATATTCCAGATAAAACATGT+CGG | - | chr3.4:99671747-99671766 | None:intergenic | 25.0% |
| ! | ATGCTTAAAATTCACTTGAA+TGG | + | chr3.4:99669551-99669570 | MS.gene063136:intron | 25.0% |
| ! | ATTCATTTAAATAGGCTAAC+TGG | - | chr3.4:99669360-99669379 | None:intergenic | 25.0% |
| ! | ATTGAACAAATTAACGTAGT+TGG | + | chr3.4:99669444-99669463 | MS.gene063136:intron | 25.0% |
| ! | CTAATTTAAAAGTCTGTCAA+TGG | + | chr3.4:99671190-99671209 | MS.gene063136:intron | 25.0% |
| ! | GGTTAATTTATGTTTCTTCA+AGG | + | chr3.4:99670625-99670644 | MS.gene063136:intron | 25.0% |
| ! | TAAATTAACCCAAAAAAAGG+TGG | - | chr3.4:99670615-99670634 | None:intergenic | 25.0% |
| ! | TCAAAAGAAACATAATTCTC+GGG | - | chr3.4:99669186-99669205 | None:intergenic | 25.0% |
| ! | TCAATCATAACATAATCCAA+GGG | - | chr3.4:99668446-99668465 | None:intergenic | 25.0% |
| ! | TCTAATAATACATCTTACAC+AGG | - | chr3.4:99670421-99670440 | None:intergenic | 25.0% |
| ! | TGATAAATGGAAAAGATTTG+AGG | + | chr3.4:99670029-99670048 | MS.gene063136:intron | 25.0% |
| ! | TGCTTAAAATTCACTTGAAT+GGG | + | chr3.4:99669552-99669571 | MS.gene063136:intron | 25.0% |
| ! | TTCAATCATAACATAATCCA+AGG | - | chr3.4:99668447-99668466 | None:intergenic | 25.0% |
| ! | TTCATTTAAATAGGCTAACT+GGG | - | chr3.4:99669359-99669378 | None:intergenic | 25.0% |
| !! | AACTCTTTCCTATGATATTT+TGG | + | chr3.4:99668891-99668910 | MS.gene063136:intron | 25.0% |
| !! | AAGAGGATTAATTCTTTTTG+GGG | + | chr3.4:99669738-99669757 | MS.gene063136:intron | 25.0% |
| !! | CAAATCTTTTCCATTTATCA+TGG | - | chr3.4:99670029-99670048 | None:intergenic | 25.0% |
| !! | CAATAATAATTCTAGTTAGG+TGG | + | chr3.4:99669257-99669276 | MS.gene063136:intron | 25.0% |
| !! | GAAGAGGATTAATTCTTTTT+GGG | + | chr3.4:99669737-99669756 | MS.gene063136:intron | 25.0% |
| !! | TAATTCTAGTTAGGTGATTA+TGG | + | chr3.4:99669326-99669345 | MS.gene063136:intron | 25.0% |
| !! | TATGATTTTTGTGTTGGAAA+TGG | + | chr3.4:99667938-99667957 | MS.gene063136:intron | 25.0% |
| !! | TCAAGGTTAATGCTAATTTT+AGG | + | chr3.4:99670642-99670661 | MS.gene063136:intron | 25.0% |
| !! | TTCATTGCTCAAATTTTTCA+TGG | + | chr3.4:99668594-99668613 | MS.gene063136:intron | 25.0% |
| !! | TTTATTTGAATTGACTTACC+TGG | + | chr3.4:99670362-99670381 | MS.gene063136:intron | 25.0% |
| !!! | AGATTATCTGTTTTTAGACT+TGG | + | chr3.4:99670438-99670457 | MS.gene063136:intron | 25.0% |
| !!! | TATGATTGAAGCATTTTGAT+TGG | + | chr3.4:99668457-99668476 | MS.gene063136:intron | 25.0% |
| !!! | TTTTGAGAATCAAACAAGTT+GGG | + | chr3.4:99671562-99671581 | MS.gene063136:intron | 25.0% |
| !!! | TTTTGGTTAATGACAACTTT+AGG | + | chr3.4:99668044-99668063 | MS.gene063136:intron | 25.0% |
| !!! | TTTTTGAGAATCAAACAAGT+TGG | + | chr3.4:99671561-99671580 | MS.gene063136:intron | 25.0% |
| AAAAAGAGGTAGATCTGTAA+TGG | + | chr3.4:99671060-99671079 | MS.gene063136:intron | 30.0% | |
| AACAAATCTGTCACAATCAA+AGG | + | chr3.4:99667434-99667453 | MS.gene063136:CDS | 30.0% | |
| AACAACTTTCACAAAAGAAG+TGG | - | chr3.4:99670226-99670245 | None:intergenic | 30.0% | |
| AATTCTTAATTGCAGCTCAT+AGG | + | chr3.4:99668944-99668963 | MS.gene063136:intron | 30.0% | |
| ACCAAGTACCAAAATATCAT+AGG | - | chr3.4:99668902-99668921 | None:intergenic | 30.0% | |
| ATAGTCTTTCTCTACTTTCA+TGG | + | chr3.4:99671156-99671175 | MS.gene063136:intron | 30.0% | |
| ATCTAGTCCTTTCTTATTCT+GGG | + | chr3.4:99669761-99669780 | MS.gene063136:intron | 30.0% | |
| ATCTTCTGTGTAATTATTCC+TGG | + | chr3.4:99669790-99669809 | MS.gene063136:intron | 30.0% | |
| CAATCATAACATAATCCAAG+GGG | - | chr3.4:99668445-99668464 | None:intergenic | 30.0% | |
| CATGGCATATGATATGATAT+AGG | + | chr3.4:99669223-99669242 | MS.gene063136:intron | 30.0% | |
| CCATGGAAAACAATCATATA+TGG | + | chr3.4:99670872-99670891 | MS.gene063136:intron | 30.0% | |
| GAAATTAAAAGGGACAAAAC+TGG | + | chr3.4:99671462-99671481 | MS.gene063136:intron | 30.0% | |
| GCATATTTCAAAAATCCACT+TGG | - | chr3.4:99669628-99669647 | None:intergenic | 30.0% | |
| GTTATGTAAGGCTTAAAAAG+AGG | + | chr3.4:99671046-99671065 | MS.gene063136:intron | 30.0% | |
| TAGATATGTGTATGCTTGTT+TGG | + | chr3.4:99669136-99669155 | MS.gene063136:intron | 30.0% | |
| TATGAGAATATAACTAGGCA+TGG | + | chr3.4:99670480-99670499 | MS.gene063136:intron | 30.0% | |
| TATTCCAGATAAAACATGTC+GGG | - | chr3.4:99671746-99671765 | None:intergenic | 30.0% | |
| TATTGGAGACATGATCAATT+TGG | + | chr3.4:99669988-99670007 | MS.gene063136:intron | 30.0% | |
| TCAAACAAATTAAGGGTAAG+TGG | + | chr3.4:99669648-99669667 | MS.gene063136:intron | 30.0% | |
| TCCACTTGGATAGATATTTA+CGG | - | chr3.4:99669614-99669633 | None:intergenic | 30.0% | |
| TTCAACAATGGATCTTTATC+TGG | + | chr3.4:99668553-99668572 | MS.gene063136:intron | 30.0% | |
| TTGCAAGAGACCTTTATAAT+GGG | + | chr3.4:99670097-99670116 | MS.gene063136:intron | 30.0% | |
| TTTGAGAATCAAACAAGTTG+GGG | + | chr3.4:99671563-99671582 | MS.gene063136:intron | 30.0% | |
| TTTGCAAGAGACCTTTATAA+TGG | + | chr3.4:99670096-99670115 | MS.gene063136:intron | 30.0% | |
| ! | ATGGAAAAGATTTGAGGTTT+CGG | + | chr3.4:99670035-99670054 | MS.gene063136:intron | 30.0% |
| ! | CAAAATAACAGTTTTGCCAA+AGG | - | chr3.4:99671798-99671817 | None:intergenic | 30.0% |
| ! | CCATATATGATTGTTTTCCA+TGG | - | chr3.4:99670875-99670894 | None:intergenic | 30.0% |
| ! | CCTAATAGCTTTCATTTTAG+AGG | - | chr3.4:99668226-99668245 | None:intergenic | 30.0% |
| ! | GGAAGAGGATTAATTCTTTT+TGG | + | chr3.4:99669736-99669755 | MS.gene063136:intron | 30.0% |
| ! | TAAAACATGTCGGGATATTT+TGG | - | chr3.4:99671737-99671756 | None:intergenic | 30.0% |
| ! | TAATGAAGATCTGAAATGCT+GGG | + | chr3.4:99669672-99669691 | MS.gene063136:intron | 30.0% |
| !! | ATACTTGTTTTCTTCACATG+AGG | - | chr3.4:99668823-99668842 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGGTATTGTAGG+TGG | + | chr3.4:99670993-99671012 | MS.gene063136:intron | 30.0% |
| !! | ATTTTTGTTTGTTTCAGCTG+GGG | + | chr3.4:99667519-99667538 | MS.gene063136:intron | 30.0% |
| !! | CCTCTAAAATGAAAGCTATT+AGG | + | chr3.4:99668223-99668242 | MS.gene063136:intron | 30.0% |
| !! | GATTTTTGTTTGTTTCAGCT+GGG | + | chr3.4:99667518-99667537 | MS.gene063136:intron | 30.0% |
| !! | GTCATGTTATTTAGCTTTGT+TGG | + | chr3.4:99669279-99669298 | MS.gene063136:intron | 30.0% |
| !! | GTTCTTTTTAGAAGAAGAAG+AGG | + | chr3.4:99669712-99669731 | MS.gene063136:intron | 30.0% |
| !! | TCAGTATCTGTTTGATTTTC+TGG | + | chr3.4:99668759-99668778 | MS.gene063136:intron | 30.0% |
| !! | TGATTTTTGTTTGTTTCAGC+TGG | + | chr3.4:99667517-99667536 | MS.gene063136:intron | 30.0% |
| !!! | ATCTACTTCCACCTTTTTTT+GGG | + | chr3.4:99670604-99670623 | MS.gene063136:intron | 30.0% |
| !!! | TATCTACTTCCACCTTTTTT+TGG | + | chr3.4:99670603-99670622 | MS.gene063136:intron | 30.0% |
| !!! | TATGATATTTTGGTACTTGG+TGG | + | chr3.4:99668901-99668920 | MS.gene063136:intron | 30.0% |
| !!! | TCCTATGATATTTTGGTACT+TGG | + | chr3.4:99668898-99668917 | MS.gene063136:intron | 30.0% |
| AAAGAAGTGGTCAAGTCTTT+CGG | - | chr3.4:99670213-99670232 | None:intergenic | 35.0% | |
| AAGCTACTTCACAAAAGTCT+GGG | - | chr3.4:99671327-99671346 | None:intergenic | 35.0% | |
| AAGGAAAAATGATGCTCCTA+TGG | - | chr3.4:99668862-99668881 | None:intergenic | 35.0% | |
| AGAAATAAGCAATGAGACAC+CGG | - | chr3.4:99669493-99669512 | None:intergenic | 35.0% | |
| AGTCCTGTATAAGAAGAACA+AGG | - | chr3.4:99669091-99669110 | None:intergenic | 35.0% | |
| ATCTAGCATGGAGAAATTTG+TGG | + | chr3.4:99671654-99671673 | MS.gene063136:intron | 35.0% | |
| ATGGATCTTTATCTGGATTC+TGG | + | chr3.4:99668560-99668579 | MS.gene063136:intron | 35.0% | |
| CCACTTGGATAGATATTTAC+GGG | - | chr3.4:99669613-99669632 | None:intergenic | 35.0% | |
| CTAACGTTAAAGTTAACGTC+CGG | + | chr3.4:99667626-99667645 | MS.gene063136:CDS | 35.0% | |
| CTATTATTTGCTCCTTCGAT+TGG | + | chr3.4:99668264-99668283 | MS.gene063136:intron | 35.0% | |
| CTCATACTATCAAACAACAG+TGG | - | chr3.4:99670323-99670342 | None:intergenic | 35.0% | |
| CTGTTGTGACAAACTTAATG+TGG | + | chr3.4:99669886-99669905 | MS.gene063136:intron | 35.0% | |
| CTTATAGAGCATATCTAGCA+TGG | + | chr3.4:99671642-99671661 | MS.gene063136:intron | 35.0% | |
| GAAGCTTTGCCTACTTTAAT+GGG | - | chr3.4:99670700-99670719 | None:intergenic | 35.0% | |
| GATCTAGTCCTTTCTTATTC+TGG | + | chr3.4:99669760-99669779 | MS.gene063136:intron | 35.0% | |
| GTCCTGTATAAGAAGAACAA+GGG | - | chr3.4:99669090-99669109 | None:intergenic | 35.0% | |
| GTGTATGCTTGTTTGGATTA+TGG | + | chr3.4:99669143-99669162 | MS.gene063136:intron | 35.0% | |
| TGCAAGAGACCTTTATAATG+GGG | + | chr3.4:99670098-99670117 | MS.gene063136:intron | 35.0% | |
| TTCTGTGTAATTATTCCTGG+TGG | + | chr3.4:99669793-99669812 | MS.gene063136:intron | 35.0% | |
| TTTAAGTCGGCATTAACCAT+AGG | + | chr3.4:99668843-99668862 | MS.gene063136:intron | 35.0% | |
| TTTGAGTACAATTCTGCTAC+TGG | + | chr3.4:99667832-99667851 | MS.gene063136:CDS | 35.0% | |
| ! | ACCTTTATAATGGGGATATC+AGG | + | chr3.4:99670106-99670125 | MS.gene063136:intron | 35.0% |
| ! | ATATCCCGACATGTTTTATC+TGG | + | chr3.4:99671739-99671758 | MS.gene063136:CDS | 35.0% |
| ! | CTAATGAAGATCTGAAATGC+TGG | + | chr3.4:99669671-99669690 | MS.gene063136:intron | 35.0% |
| ! | CTTTAATTAGTCTGTGCATG+TGG | - | chr3.4:99669838-99669857 | None:intergenic | 35.0% |
| ! | GAAAATCTGAAATTACCCGT+TGG | + | chr3.4:99671711-99671730 | MS.gene063136:CDS | 35.0% |
| ! | GAAGGAAAGTGTATTGTTCA+TGG | + | chr3.4:99667754-99667773 | MS.gene063136:CDS | 35.0% |
| ! | GGGTAATTTCAGATTTTCGA+GGG | - | chr3.4:99671709-99671728 | None:intergenic | 35.0% |
| ! | TTGAGAATCAAACAAGTTGG+GGG | + | chr3.4:99671564-99671583 | MS.gene063136:intron | 35.0% |
| ! | TTGCTCAAATTTTTCATGGC+AGG | + | chr3.4:99668598-99668617 | MS.gene063136:intron | 35.0% |
| !! | CTTTTTAGAAGAAGAAGAGG+AGG | + | chr3.4:99669715-99669734 | MS.gene063136:intron | 35.0% |
| !! | TTATTTTGCTCATCCAGATG+TGG | + | chr3.4:99671810-99671829 | MS.gene063136:CDS | 35.0% |
| !! | TTTTTCTGGTGACGAAAGAA+AGG | + | chr3.4:99670950-99670969 | MS.gene063136:intron | 35.0% |
| AAATGCTGGGAAAGATTCAG+AGG | + | chr3.4:99669685-99669704 | MS.gene063136:intron | 40.0% | |
| AAGAAGGATCATCACCATTC+AGG | - | chr3.4:99668339-99668358 | None:intergenic | 40.0% | |
| AAGAGGTAGATCTGTAATGG+AGG | + | chr3.4:99671063-99671082 | MS.gene063136:intron | 40.0% | |
| ACAGTCATGTCTATACAAGC+AGG | - | chr3.4:99670182-99670201 | None:intergenic | 40.0% | |
| ACATTTCTTTCACACTGGTC+CGG | + | chr3.4:99669471-99669490 | MS.gene063136:intron | 40.0% | |
| ACCCAGGATTACAAAAGCAA+GGG | - | chr3.4:99671092-99671111 | None:intergenic | 40.0% | |
| ACTGAACCATCAGATCATCA+GGG | - | chr3.4:99668650-99668669 | None:intergenic | 40.0% | |
| AGGTTTCATTCTCCAATCGA+AGG | - | chr3.4:99668279-99668298 | None:intergenic | 40.0% | |
| ATATCTGCATGCTTCTCCTT+AGG | + | chr3.4:99670844-99670863 | MS.gene063136:intron | 40.0% | |
| ATCAAAGATCTTAAGTGGCC+AGG | - | chr3.4:99670383-99670402 | None:intergenic | 40.0% | |
| ATCAGATCATCAGGGTTGTA+GGG | - | chr3.4:99668642-99668661 | None:intergenic | 40.0% | |
| ATCCTTCTTCTCCAATGCAA+AGG | + | chr3.4:99668350-99668369 | MS.gene063136:intron | 40.0% | |
| ATGACTCTAGGTTTCGCTTT+GGG | - | chr3.4:99667397-99667416 | None:intergenic | 40.0% | |
| ATTCTCTATCTATCCCCATC+GGG | + | chr3.4:99671289-99671308 | MS.gene063136:intron | 40.0% | |
| CAAAAGTCTGGGTATGAACA+AGG | - | chr3.4:99671316-99671335 | None:intergenic | 40.0% | |
| CAAGCTACTTCACAAAAGTC+TGG | - | chr3.4:99671328-99671347 | None:intergenic | 40.0% | |
| CATAACATCGCTTCTACCTT+CGG | - | chr3.4:99671032-99671051 | None:intergenic | 40.0% | |
| CATATAAACCCTCATCGAAC+AGG | - | chr3.4:99670063-99670082 | None:intergenic | 40.0% | |
| CATCCAAATCAGGTTTACAG+CGG | - | chr3.4:99668515-99668534 | None:intergenic | 40.0% | |
| CCCGTAAATATCTATCCAAG+TGG | + | chr3.4:99669610-99669629 | MS.gene063136:intron | 40.0% | |
| CGAAGCTTTGCCTACTTTAA+TGG | - | chr3.4:99670701-99670720 | None:intergenic | 40.0% | |
| CTCCCTTGTTCTTCTTATAC+AGG | + | chr3.4:99669085-99669104 | MS.gene063136:intron | 40.0% | |
| CTGAACAAACTCTGTGACAA+TGG | + | chr3.4:99671117-99671136 | MS.gene063136:intron | 40.0% | |
| CTTAAGCTGCCCATTAAAGT+AGG | + | chr3.4:99670688-99670707 | MS.gene063136:intron | 40.0% | |
| GATAGATATTTACGGGACCT+CGG | - | chr3.4:99669606-99669625 | None:intergenic | 40.0% | |
| GATTCTCTATCTATCCCCAT+CGG | + | chr3.4:99671288-99671307 | MS.gene063136:intron | 40.0% | |
| GCATGACATTTCTTTCACAC+TGG | + | chr3.4:99669466-99669485 | MS.gene063136:intron | 40.0% | |
| GCCTGATATCCCCATTATAA+AGG | - | chr3.4:99670110-99670129 | None:intergenic | 40.0% | |
| GGAAAGAGTTGTCTTACTCA+AGG | - | chr3.4:99668881-99668900 | None:intergenic | 40.0% | |
| GGAGACATGATCAATTTGGA+TGG | + | chr3.4:99669992-99670011 | MS.gene063136:intron | 40.0% | |
| GGTAGAAGCGATGTTATGTA+AGG | + | chr3.4:99671034-99671053 | MS.gene063136:intron | 40.0% | |
| GTTTGACTGAGTATGACTCT+AGG | - | chr3.4:99667409-99667428 | None:intergenic | 40.0% | |
| TAAGAAGAACAAGGGAGAGT+AGG | - | chr3.4:99669082-99669101 | None:intergenic | 40.0% | |
| TACAAGACTCGCAGATACAA+AGG | + | chr3.4:99670286-99670305 | MS.gene063136:CDS | 40.0% | |
| TACACTAAGCTTGATGCTGT+TGG | + | chr3.4:99667787-99667806 | MS.gene063136:CDS | 40.0% | |
| TACCCAGGATTACAAAAGCA+AGG | - | chr3.4:99671093-99671112 | None:intergenic | 40.0% | |
| TACTTGACACGCTGCTAATT+TGG | + | chr3.4:99671613-99671632 | MS.gene063136:intron | 40.0% | |
| TAGTCCTTTCTTATTCTGGG+AGG | + | chr3.4:99669764-99669783 | MS.gene063136:intron | 40.0% | |
| TATGACTCTAGGTTTCGCTT+TGG | - | chr3.4:99667398-99667417 | None:intergenic | 40.0% | |
| TCCTTCTTCTCCAATGCAAA+GGG | + | chr3.4:99668351-99668370 | MS.gene063136:intron | 40.0% | |
| TGAACTGAGGATAAGGATGA+TGG | - | chr3.4:99668489-99668508 | None:intergenic | 40.0% | |
| TGCTTGTATAGACATGACTG+TGG | + | chr3.4:99670181-99670200 | MS.gene063136:CDS | 40.0% | |
| TGTGAAAGTTGTTCCGTTGA+AGG | + | chr3.4:99670233-99670252 | MS.gene063136:CDS | 40.0% | |
| TTGTATAGACATGACTGTGG+AGG | + | chr3.4:99670184-99670203 | MS.gene063136:CDS | 40.0% | |
| TTTCTGGACTCTTGTATGTC+TGG | + | chr3.4:99668775-99668794 | MS.gene063136:intron | 40.0% | |
| ! | AGAGGTAGATCTGTAATGGA+GGG | + | chr3.4:99671064-99671083 | MS.gene063136:intron | 40.0% |
| ! | AGTCCTTTCTTATTCTGGGA+GGG | + | chr3.4:99669765-99669784 | MS.gene063136:intron | 40.0% |
| ! | CGGGTAATTTCAGATTTTCG+AGG | - | chr3.4:99671710-99671729 | None:intergenic | 40.0% |
| ! | TAGAGAGTTGATCACCTGAA+TGG | + | chr3.4:99668322-99668341 | MS.gene063136:intron | 40.0% |
| !! | ACCCTTGCTTTTGTAATCCT+GGG | + | chr3.4:99671088-99671107 | MS.gene063136:intron | 40.0% |
| !! | CAGAGTGCTGATACAATTGA+AGG | + | chr3.4:99667736-99667755 | MS.gene063136:CDS | 40.0% |
| !! | CTGTAAACCTGATTTGGATG+AGG | + | chr3.4:99668515-99668534 | MS.gene063136:intron | 40.0% |
| !! | GATTCTGCTTTGTTTCCTTC+TGG | + | chr3.4:99668997-99669016 | MS.gene063136:intron | 40.0% |
| !! | TTGCTTTTGTAATCCTGGGT+AGG | + | chr3.4:99671092-99671111 | MS.gene063136:intron | 40.0% |
| !!! | CAGCTGTTTTTGACCTTCAA+CGG | - | chr3.4:99670249-99670268 | None:intergenic | 40.0% |
| AAACACATCCTCCACTTCCA+AGG | - | chr3.4:99671237-99671256 | None:intergenic | 45.0% | |
| AACAAGGGAGAGTAGGTTTG+GGG | - | chr3.4:99669075-99669094 | None:intergenic | 45.0% | |
| AACACATCCTCCACTTCCAA+GGG | - | chr3.4:99671236-99671255 | None:intergenic | 45.0% | |
| AAGTGTCTACCCCTTTGCAT+TGG | - | chr3.4:99668364-99668383 | None:intergenic | 45.0% | |
| ACGTTAAAGTTAACGTCCGG+TGG | + | chr3.4:99667629-99667648 | MS.gene063136:CDS | 45.0% | |
| ACTCACACTGCAACTCTATC+AGG | - | chr3.4:99667868-99667887 | None:intergenic | 45.0% | |
| AGAACAAGGGAGAGTAGGTT+TGG | - | chr3.4:99669077-99669096 | None:intergenic | 45.0% | |
| AGAAGAAGAAGAGGAGGAAG+AGG | + | chr3.4:99669721-99669740 | MS.gene063136:intron | 45.0% | |
| ATAGAGGATGATGCCACATC+TGG | - | chr3.4:99671826-99671845 | None:intergenic | 45.0% | |
| ATGAGCAGGCCCACTATATT+TGG | + | chr3.4:99670743-99670762 | MS.gene063136:intron | 45.0% | |
| CAAATTCTGCCTTAACTCCG+AGG | + | chr3.4:99669586-99669605 | MS.gene063136:intron | 45.0% | |
| CACTGAACCATCAGATCATC+AGG | - | chr3.4:99668651-99668670 | None:intergenic | 45.0% | |
| CATCAGATCATCAGGGTTGT+AGG | - | chr3.4:99668643-99668662 | None:intergenic | 45.0% | |
| CCTTCTTCTCCAATGCAAAG+GGG | + | chr3.4:99668352-99668371 | MS.gene063136:intron | 45.0% | |
| CTACAACCCTGATGATCTGA+TGG | + | chr3.4:99668641-99668660 | MS.gene063136:CDS | 45.0% | |
| CTCGGAGTTAAGGCAGAATT+TGG | - | chr3.4:99669588-99669607 | None:intergenic | 45.0% | |
| CTCTAGTCCTCATCCAAATC+AGG | - | chr3.4:99668525-99668544 | None:intergenic | 45.0% | |
| CTTACGTGGCAAAGATCGAA+GGG | + | chr3.4:99667581-99667600 | MS.gene063136:CDS | 45.0% | |
| GAACAAGGGAGAGTAGGTTT+GGG | - | chr3.4:99669076-99669095 | None:intergenic | 45.0% | |
| GACACTTCGATGTCAAAGTG+AGG | + | chr3.4:99668377-99668396 | MS.gene063136:intron | 45.0% | |
| GAGACAGTTTCACGGTTCAA+AGG | + | chr3.4:99667684-99667703 | MS.gene063136:CDS | 45.0% | |
| GATCTGATGGTTCAGTGTGA+GGG | + | chr3.4:99668654-99668673 | MS.gene063136:CDS | 45.0% | |
| GATGTCATCGTGTTCGTAGT+TGG | + | chr3.4:99671408-99671427 | MS.gene063136:intron | 45.0% | |
| GTGATCAACTCTCTATTCCG+AGG | - | chr3.4:99668317-99668336 | None:intergenic | 45.0% | |
| TCGATCTTTGCCACGTAAGA+GGG | - | chr3.4:99667580-99667599 | None:intergenic | 45.0% | |
| TCTTACGTGGCAAAGATCGA+AGG | + | chr3.4:99667580-99667599 | MS.gene063136:CDS | 45.0% | |
| TGACTCTAGGTTTCGCTTTG+GGG | - | chr3.4:99667396-99667415 | None:intergenic | 45.0% | |
| TGATCTGATGGTTCAGTGTG+AGG | + | chr3.4:99668653-99668672 | MS.gene063136:CDS | 45.0% | |
| TGCTTGAATGCCTAATGAGC+AGG | + | chr3.4:99670729-99670748 | MS.gene063136:intron | 45.0% | |
| TTAACGTCCGGTGGTATTAC+CGG | + | chr3.4:99667638-99667657 | MS.gene063136:CDS | 45.0% | |
| TTCCCCTCCCAGAATAAGAA+AGG | - | chr3.4:99669771-99669790 | None:intergenic | 45.0% | |
| TTCGATCTTTGCCACGTAAG+AGG | - | chr3.4:99667581-99667600 | None:intergenic | 45.0% | |
| TTCGATGTCAAAGTGAGGCA+GGG | + | chr3.4:99668382-99668401 | MS.gene063136:intron | 45.0% | |
| TTGAACCGTGAAACTGTCTC+CGG | - | chr3.4:99667684-99667703 | None:intergenic | 45.0% | |
| TTTCGAGGGTCACTAGAACT+GGG | - | chr3.4:99671695-99671714 | None:intergenic | 45.0% | |
| TTTCGGTACCTGTTCGATGA+GGG | + | chr3.4:99670052-99670071 | MS.gene063136:intron | 45.0% | |
| ! | GAGGTAGATCTGTAATGGAG+GGG | + | chr3.4:99671065-99671084 | MS.gene063136:intron | 45.0% |
| ! | GTCCTTTCTTATTCTGGGAG+GGG | + | chr3.4:99669766-99669785 | MS.gene063136:intron | 45.0% |
| ! | GTTTTCCATGGCTATGCCTA+AGG | - | chr3.4:99670863-99670882 | None:intergenic | 45.0% |
| !! | ATATAGTGGGCCTGCTCATT+AGG | - | chr3.4:99670742-99670761 | None:intergenic | 45.0% |
| !! | CTCTTGTATGTCTGGTTCTG+TGG | + | chr3.4:99668783-99668802 | MS.gene063136:intron | 45.0% |
| !! | GACCCTTGCTTTTGTAATCC+TGG | + | chr3.4:99671087-99671106 | MS.gene063136:intron | 45.0% |
| !! | TTTTCGAGGGTCACTAGAAC+TGG | - | chr3.4:99671696-99671715 | None:intergenic | 45.0% |
| !!! | TGTCGGGATATTTTGGCCAA+CGG | - | chr3.4:99671730-99671749 | None:intergenic | 45.0% |
| !! | TTTAATGAAAAATTTATATT+GGG | + | chr3.4:99667976-99667995 | MS.gene063136:intron | 5.0% |
| !!! | TATAAATTTTTCATTAAAAA+AGG | - | chr3.4:99667974-99667993 | None:intergenic | 5.0% |
| !!! | TTTTAATGAAAAATTTATAT+TGG | + | chr3.4:99667975-99667994 | MS.gene063136:intron | 5.0% |
| AACATCGCTTCTACCTTCGG+CGG | - | chr3.4:99671029-99671048 | None:intergenic | 50.0% | |
| AGGGCTTGAGGGATTAAACC+TGG | + | chr3.4:99668413-99668432 | MS.gene063136:intron | 50.0% | |
| AGGGTGAAGAATAGGGCTTG+AGG | + | chr3.4:99668401-99668420 | MS.gene063136:intron | 50.0% | |
| AGTAGCATCCCTGTTTCCCT+TGG | + | chr3.4:99671217-99671236 | MS.gene063136:intron | 50.0% | |
| AGTGAGGCAGGGTGAAGAAT+AGG | + | chr3.4:99668393-99668412 | MS.gene063136:intron | 50.0% | |
| ATCCCTGTTTCCCTTGGAAG+TGG | + | chr3.4:99671223-99671242 | MS.gene063136:intron | 50.0% | |
| CCCCTTTGCATTGGAGAAGA+AGG | - | chr3.4:99668355-99668374 | None:intergenic | 50.0% | |
| CTCCACTTCCAAGGGAAACA+GGG | - | chr3.4:99671228-99671247 | None:intergenic | 50.0% | |
| CTTCGATGTCAAAGTGAGGC+AGG | + | chr3.4:99668381-99668400 | MS.gene063136:intron | 50.0% | |
| CTTCTCCTTAGGCATAGCCA+TGG | + | chr3.4:99670855-99670874 | MS.gene063136:intron | 50.0% | |
| CTTTGCCACGTAAGAGGGTT+TGG | - | chr3.4:99667575-99667594 | None:intergenic | 50.0% | |
| GAATGAAACCTGTTCCTGCC+TGG | + | chr3.4:99668288-99668307 | MS.gene063136:intron | 50.0% | |
| GAGGGTTTGGATGGATCAGA+TGG | - | chr3.4:99667562-99667581 | None:intergenic | 50.0% | |
| GCTCCGCTGTAAACCTGATT+TGG | + | chr3.4:99668509-99668528 | MS.gene063136:intron | 50.0% | |
| GGCTTGAGGGATTAAACCTG+GGG | + | chr3.4:99668415-99668434 | MS.gene063136:intron | 50.0% | |
| GGGCTTGAGGGATTAAACCT+GGG | + | chr3.4:99668414-99668433 | MS.gene063136:intron | 50.0% | |
| GGGTGAAGAATAGGGCTTGA+GGG | + | chr3.4:99668402-99668421 | MS.gene063136:intron | 50.0% | |
| GGTATGAACAAGGACCCGAT+GGG | - | chr3.4:99671306-99671325 | None:intergenic | 50.0% | |
| GTATGAACAAGGACCCGATG+GGG | - | chr3.4:99671305-99671324 | None:intergenic | 50.0% | |
| GTGAGGCAGGGTGAAGAATA+GGG | + | chr3.4:99668394-99668413 | MS.gene063136:intron | 50.0% | |
| GTTTCGGTACCTGTTCGATG+AGG | + | chr3.4:99670051-99670070 | MS.gene063136:intron | 50.0% | |
| TAAACCTGGGGTTATCCCCT+TGG | + | chr3.4:99668427-99668446 | MS.gene063136:intron | 50.0% | |
| TAATCCAAGGGGATAACCCC+AGG | - | chr3.4:99668434-99668453 | None:intergenic | 50.0% | |
| TCCATCCAAACCCTCTTACG+TGG | + | chr3.4:99667567-99667586 | MS.gene063136:CDS | 50.0% | |
| TTCGAGGGTCACTAGAACTG+GGG | - | chr3.4:99671694-99671713 | None:intergenic | 50.0% | |
| TTTACAGCGGAGCTGAACTG+AGG | - | chr3.4:99668502-99668521 | None:intergenic | 50.0% | |
| TTTACGGGACCTCGGAGTTA+AGG | - | chr3.4:99669598-99669617 | None:intergenic | 50.0% | |
| ! | AGTTTGTTCAGCTCCTACCC+AGG | - | chr3.4:99671108-99671127 | None:intergenic | 50.0% |
| !! | AGAGTGCTGCGCTTCAACAA+TGG | + | chr3.4:99668541-99668560 | MS.gene063136:intron | 50.0% |
| !!! | AGGTTTCGCTTTGGGGCTTT+TGG | - | chr3.4:99667389-99667408 | None:intergenic | 50.0% |
| !!! | GTCGGGATATTTTGGCCAAC+GGG | - | chr3.4:99671729-99671748 | None:intergenic | 50.0% |
| AGAGTAGGTTTGGGGAGCAG+GGG | - | chr3.4:99669067-99669086 | None:intergenic | 55.0% | |
| AGGGTCACTAGAACTGGGGA+TGG | - | chr3.4:99671690-99671709 | None:intergenic | 55.0% | |
| CCTCCACTTCCAAGGGAAAC+AGG | - | chr3.4:99671229-99671248 | None:intergenic | 55.0% | |
| CCTGTTTCCCTTGGAAGTGG+AGG | + | chr3.4:99671226-99671245 | MS.gene063136:intron | 55.0% | |
| GAGAGTAGGTTTGGGGAGCA+GGG | - | chr3.4:99669068-99669087 | None:intergenic | 55.0% | |
| GCCACGTAAGAGGGTTTGGA+TGG | - | chr3.4:99667571-99667590 | None:intergenic | 55.0% | |
| GCGGAGCTGAACTGAGGATA+AGG | - | chr3.4:99668496-99668515 | None:intergenic | 55.0% | |
| GGCTGCAGTGACTGGTAAGT+TGG | + | chr3.4:99668675-99668694 | MS.gene063136:intron | 55.0% | |
| GGGTATGAACAAGGACCCGA+TGG | - | chr3.4:99671307-99671326 | None:intergenic | 55.0% | |
| GGGTCACTAGAACTGGGGAT+GGG | - | chr3.4:99671689-99671708 | None:intergenic | 55.0% | |
| TGGATACTAAACGCCGCCGA+AGG | + | chr3.4:99671013-99671032 | MS.gene063136:CDS | 55.0% | |
| ! | GGGATCGAAGCTGATTCACG+AGG | + | chr3.4:99667601-99667620 | MS.gene063136:CDS | 55.0% |
| ! | GTGCTACTAGAGTTGCCACC+AGG | - | chr3.4:99669811-99669830 | None:intergenic | 55.0% |
| AGTGTGAGGGCTGCAGTGAC+TGG | + | chr3.4:99668667-99668686 | MS.gene063136:CDS | 60.0% | |
| CTCTCTATTCCGAGGCAGCC+AGG | - | chr3.4:99668309-99668328 | None:intergenic | 60.0% | |
| GACAGAAGCAGCGTGCCAGA+AGG | - | chr3.4:99669015-99669034 | None:intergenic | 60.0% | |
| GGAGAGTAGGTTTGGGGAGC+AGG | - | chr3.4:99669069-99669088 | None:intergenic | 60.0% | |
| GGTGGCCGGAGACAGTTTCA+CGG | + | chr3.4:99667676-99667695 | MS.gene063136:CDS | 60.0% | |
| TACCGGCCGGAGGAGTCAAT+TGG | + | chr3.4:99667655-99667674 | MS.gene063136:CDS | 60.0% | |
| ! | CACCAATTGACTCCTCCGGC+CGG | - | chr3.4:99667660-99667679 | None:intergenic | 60.0% |
| ! | CGGAGGAGTCAATTGGTGGC+CGG | + | chr3.4:99667662-99667681 | MS.gene063136:CDS | 60.0% |
| ! | CGGCCACCAATTGACTCCTC+CGG | - | chr3.4:99667664-99667683 | None:intergenic | 60.0% |
| CCTCCGGCCGGTAATACCAC+CGG | - | chr3.4:99667648-99667667 | None:intergenic | 65.0% | |
| CGGCCGGAGGAGTCAATTGG+TGG | + | chr3.4:99667658-99667677 | MS.gene063136:CDS | 65.0% | |
| CGTCCGGTGGTATTACCGGC+CGG | + | chr3.4:99667642-99667661 | MS.gene063136:CDS | 65.0% | |
| CTATTCCGAGGCAGCCAGGC+AGG | - | chr3.4:99668305-99668324 | None:intergenic | 65.0% | |
| CTGTTCCTGCCTGGCTGCCT+CGG | + | chr3.4:99668297-99668316 | MS.gene063136:intron | 65.0% | |
| CCGGTGGTATTACCGGCCGG+AGG | + | chr3.4:99667645-99667664 | MS.gene063136:CDS | 70.0% | |
| CGAGGCAGCCAGGCAGGAAC+AGG | - | chr3.4:99668299-99668318 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 99667377 | 99671853 | 99667377 | ID=MS.gene063136 |
| chr3.4 | mRNA | 99667377 | 99671853 | 99667377 | ID=MS.gene063136.t1;Parent=MS.gene063136 |
| chr3.4 | exon | 99667377 | 99667455 | 99667377 | ID=MS.gene063136.t1.exon1;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99667377 | 99667455 | 99667377 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| chr3.4 | exon | 99667536 | 99667881 | 99667536 | ID=MS.gene063136.t1.exon2;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99667536 | 99667881 | 99667536 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| chr3.4 | exon | 99668620 | 99668688 | 99668620 | ID=MS.gene063136.t1.exon3;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99668620 | 99668688 | 99668620 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| chr3.4 | exon | 99670172 | 99670307 | 99670172 | ID=MS.gene063136.t1.exon4;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99670172 | 99670307 | 99670172 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| chr3.4 | exon | 99671012 | 99671034 | 99671012 | ID=MS.gene063136.t1.exon5;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99671012 | 99671034 | 99671012 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| chr3.4 | exon | 99671697 | 99671853 | 99671697 | ID=MS.gene063136.t1.exon6;Parent=MS.gene063136.t1 |
| chr3.4 | CDS | 99671697 | 99671853 | 99671697 | ID=cds.MS.gene063136.t1;Parent=MS.gene063136.t1 |
| Gene Sequence |
| Protein sequence |
