Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063560.t1 | XP_003612270.1 | 95.6 | 182 | 8 | 0 | 1 | 182 | 4 | 185 | 5.10E-92 | 347.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063560.t1 | Q38853 | 58.7 | 143 | 55 | 2 | 44 | 182 | 40 | 182 | 2.1e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063560.t1 | B7FGV4 | 95.6 | 182 | 8 | 0 | 1 | 182 | 4 | 185 | 3.7e-92 | 347.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050404 | MS.gene063560 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene057246 | MS.gene063560 | 0.808304 | 3.31E-50 | -1.69E-46 |
| MS.gene058748 | MS.gene063560 | 0.81745 | 3.28E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063560.t1 | MTR_5g023170 | 95.604 | 182 | 8 | 0 | 1 | 182 | 4 | 185 | 9.41e-130 | 362 |
| MS.gene063560.t1 | MTR_5g023170 | 95.570 | 158 | 7 | 0 | 1 | 158 | 4 | 161 | 1.05e-110 | 313 |
| MS.gene063560.t1 | MTR_5g022390 | 49.123 | 114 | 56 | 1 | 71 | 182 | 31 | 144 | 1.67e-31 | 111 |
| MS.gene063560.t1 | MTR_2g017630 | 42.857 | 112 | 63 | 1 | 72 | 182 | 12 | 123 | 7.70e-29 | 104 |
| MS.gene063560.t1 | MTR_8g075420 | 45.833 | 120 | 59 | 2 | 58 | 175 | 5 | 120 | 9.62e-28 | 101 |
| MS.gene063560.t1 | MTR_2g059890 | 39.200 | 125 | 71 | 2 | 59 | 182 | 3 | 123 | 1.29e-27 | 101 |
| MS.gene063560.t1 | MTR_8g075420 | 48.039 | 102 | 47 | 2 | 58 | 157 | 5 | 102 | 5.49e-22 | 85.9 |
| MS.gene063560.t1 | MTR_2g059890 | 40.404 | 99 | 54 | 2 | 58 | 155 | 2 | 96 | 7.04e-20 | 80.5 |
| MS.gene063560.t1 | MTR_2g059890 | 40.404 | 99 | 54 | 2 | 58 | 155 | 2 | 96 | 9.76e-20 | 80.5 |
| MS.gene063560.t1 | MTR_2g059890 | 40.816 | 98 | 53 | 2 | 59 | 155 | 3 | 96 | 2.96e-19 | 80.5 |
| MS.gene063560.t1 | MTR_5g022390 | 50.000 | 72 | 34 | 1 | 71 | 140 | 31 | 102 | 1.03e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063560.t1 | AT4G35770 | 58.741 | 143 | 55 | 2 | 44 | 182 | 40 | 182 | 2.94e-56 | 176 |
| MS.gene063560.t1 | AT5G66040 | 65.487 | 113 | 39 | 0 | 69 | 181 | 7 | 119 | 6.82e-51 | 160 |
| MS.gene063560.t1 | AT4G35770 | 57.143 | 119 | 47 | 2 | 44 | 158 | 40 | 158 | 4.91e-42 | 139 |
| MS.gene063560.t1 | AT4G35770 | 57.143 | 119 | 47 | 2 | 44 | 158 | 40 | 158 | 6.77e-42 | 139 |
| MS.gene063560.t1 | AT4G35770 | 56.436 | 101 | 40 | 2 | 44 | 140 | 40 | 140 | 1.86e-33 | 116 |
| MS.gene063560.t1 | AT5G66170 | 49.107 | 112 | 51 | 2 | 64 | 173 | 12 | 119 | 9.19e-31 | 109 |
| MS.gene063560.t1 | AT5G66170 | 48.246 | 114 | 51 | 3 | 64 | 173 | 12 | 121 | 8.21e-29 | 104 |
| MS.gene063560.t1 | AT2G21045 | 41.441 | 111 | 65 | 0 | 72 | 182 | 43 | 153 | 6.94e-27 | 100 |
| MS.gene063560.t1 | AT5G66170 | 50.515 | 97 | 42 | 2 | 64 | 158 | 12 | 104 | 5.31e-24 | 92.0 |
| MS.gene063560.t1 | AT5G66040 | 60.938 | 64 | 25 | 0 | 118 | 181 | 1 | 64 | 5.89e-23 | 87.0 |
| MS.gene063560.t1 | AT2G17850 | 40.385 | 104 | 60 | 1 | 72 | 173 | 34 | 137 | 1.03e-21 | 86.7 |
| MS.gene063560.t1 | AT4G35770 | 54.430 | 79 | 32 | 2 | 44 | 118 | 40 | 118 | 2.93e-21 | 84.7 |
| MS.gene063560.t1 | AT4G35770 | 54.430 | 79 | 32 | 2 | 44 | 118 | 40 | 118 | 2.93e-21 | 84.7 |
| MS.gene063560.t1 | AT2G17850 | 33.929 | 112 | 63 | 2 | 74 | 174 | 59 | 170 | 4.51e-16 | 72.8 |
| MS.gene063560.t1 | AT2G17850 | 39.326 | 89 | 52 | 1 | 72 | 158 | 34 | 122 | 2.66e-15 | 69.3 |
Find 40 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGTCCCTTATTAAATT+TGG | 0.146508 | 5.2:-14476067 | None:intergenic |
| AAAATCTTCCAAATTTAATA+AGG | 0.178231 | 5.2:+14476059 | MS.gene063560:CDS |
| TCTAGCTGGCCATAAGTATT+TGG | 0.181385 | 5.2:+14476307 | MS.gene063560:CDS |
| ACCTTACATCCAAATACTTA+TGG | 0.228445 | 5.2:-14476316 | None:intergenic |
| GTGTGGTTTAAAGGGGAATT+TGG | 0.241136 | 5.2:+14476229 | MS.gene063560:CDS |
| AAGCACGATGTGTGGTTTAA+AGG | 0.244947 | 5.2:+14476220 | MS.gene063560:intron |
| AGCACGATGTGTGGTTTAAA+GGG | 0.328888 | 5.2:+14476221 | MS.gene063560:intron |
| GATCCAACTTTGTACATATA+AGG | 0.335693 | 5.2:-14476672 | None:intergenic |
| TATGCTGCTTGGACTCAAAA+TGG | 0.348576 | 5.2:+14477560 | MS.gene063560:CDS |
| AAATCTTCCAAATTTAATAA+GGG | 0.364373 | 5.2:+14476060 | MS.gene063560:CDS |
| ATTAGAGTGTGACCTTGTTA+TGG | 0.398979 | 5.2:-14475899 | None:intergenic |
| GGGAATTTGGAGGAAGTTGT+TGG | 0.404121 | 5.2:+14476242 | MS.gene063560:CDS |
| GCCATAAGTATTTGGATGTA+AGG | 0.427420 | 5.2:+14476315 | MS.gene063560:CDS |
| TAGCTGGTGGTTATGCTGCT+TGG | 0.436274 | 5.2:+14477549 | MS.gene063560:CDS |
| ACACGCACTGGCACTGAAGT+TGG | 0.437130 | 5.2:-14476269 | None:intergenic |
| ACCAGCTATGTCTGTGAGTC+CGG | 0.440393 | 5.2:-14477534 | None:intergenic |
| AACCAAAGTGTTCCAACTTC+CGG | 0.448542 | 5.2:+14476103 | MS.gene063560:CDS |
| GTGTTCTGCCGTAGAATTAG+AGG | 0.450733 | 5.2:-14475874 | None:intergenic |
| TATATGTACAAAGTTGGATC+AGG | 0.472445 | 5.2:+14476675 | MS.gene063560:CDS |
| TTTAATGCTGGACACGCTCC+TGG | 0.480736 | 5.2:+14476636 | MS.gene063560:CDS |
| ATACCTTATATGTACAAAGT+TGG | 0.502957 | 5.2:+14476669 | MS.gene063560:CDS |
| TGCATTGTATAGGGGTTCAC+CGG | 0.511879 | 5.2:+14477515 | MS.gene063560:intron |
| GCTCACGAGCTTCTTCTAGC+TGG | 0.514761 | 5.2:+14476293 | MS.gene063560:CDS |
| AGGGTTGTCAGCTTGGGAAA+AGG | 0.515357 | 5.2:+14477110 | MS.gene063560:intron |
| AGCTCGTGAGCTACACGCAC+TGG | 0.517304 | 5.2:-14476281 | None:intergenic |
| TACCGGAAGTTGGAACACTT+TGG | 0.532325 | 5.2:-14476105 | None:intergenic |
| ATTCACGTCCTCTAATTCTA+CGG | 0.536092 | 5.2:+14475866 | MS.gene063560:CDS |
| ACCACGGAAGAGTTTAATGC+TGG | 0.548422 | 5.2:+14476624 | MS.gene063560:CDS |
| TGGTTTAAAGGGGAATTTGG+AGG | 0.552343 | 5.2:+14476232 | MS.gene063560:CDS |
| GCTTGGGAAAAGGTCTATGA+TGG | 0.555495 | 5.2:+14477120 | MS.gene063560:CDS |
| ACCGGACTCACAGACATAGC+TGG | 0.570324 | 5.2:+14477533 | MS.gene063560:CDS |
| TAAGGTATGTTAATCGCACC+AGG | 0.610995 | 5.2:-14476654 | None:intergenic |
| GCAAGCGGCGGAGACATCAA+AGG | 0.618010 | 5.2:-14475839 | None:intergenic |
| GCACGATGTGTGGTTTAAAG+GGG | 0.620601 | 5.2:+14476222 | MS.gene063560:intron |
| ATTGTGATTGTGCAGGACCA+CGG | 0.621639 | 5.2:+14476608 | MS.gene063560:intron |
| TCCAGCATTAAACTCTTCCG+TGG | 0.640037 | 5.2:-14476625 | None:intergenic |
| GGCAGAACACGACCATAACA+AGG | 0.641310 | 5.2:+14475887 | MS.gene063560:CDS |
| AGGACGTGAATGAAAGCAAG+CGG | 0.673997 | 5.2:-14475854 | None:intergenic |
| ACGTGAATGAAAGCAAGCGG+CGG | 0.698419 | 5.2:-14475851 | None:intergenic |
| GGACTCACAGACATAGCTGG+TGG | 0.717723 | 5.2:+14477536 | MS.gene063560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCTTCCAAATTTAATA+AGG | + | chr5.2:14476059-14476078 | MS.gene063560:CDS | 15.0% |
| !! | AAATCTTCCAAATTTAATAA+GGG | + | chr5.2:14476060-14476079 | MS.gene063560:CDS | 15.0% |
| !! | ATATGAATAGATTAGAAAAA+AGG | - | chr5.2:14476888-14476907 | None:intergenic | 15.0% |
| !! | CAAAACATTAGTATATTAAT+CGG | - | chr5.2:14476539-14476558 | None:intergenic | 15.0% |
| !! | AAATAACATACAAAATCTCA+TGG | - | chr5.2:14477045-14477064 | None:intergenic | 20.0% |
| !! | AGTATATAGATATAGAAGAA+TGG | - | chr5.2:14475929-14475948 | None:intergenic | 20.0% |
| !! | TAAAGTAACCAATTTAATCA+AGG | + | chr5.2:14476338-14476357 | MS.gene063560:intron | 20.0% |
| !! | TAAGAGATATATAATACTCT+TGG | + | chr5.2:14476777-14476796 | MS.gene063560:intron | 20.0% |
| !! | TATTTAAGCCTTGATTAAAT+TGG | - | chr5.2:14476349-14476368 | None:intergenic | 20.0% |
| !! | TTGTAATATTCTTAGTGTTT+AGG | + | chr5.2:14476726-14476745 | MS.gene063560:intron | 20.0% |
| !!! | AGTTGTTTTGATTAATCTAA+TGG | - | chr5.2:14476803-14476822 | None:intergenic | 20.0% |
| !!! | CATAATAGTTTTGTAGTTTT+AGG | - | chr5.2:14476412-14476431 | None:intergenic | 20.0% |
| !!! | CGATTAATATACTAATGTTT+TGG | + | chr5.2:14476537-14476556 | MS.gene063560:intron | 20.0% |
| !!! | TTAACTTCTTGAAAATTTTG+AGG | + | chr5.2:14477465-14477484 | MS.gene063560:intron | 20.0% |
| !!! | TTATTTTTGTTTACACTTTC+AGG | - | chr5.2:14477373-14477392 | None:intergenic | 20.0% |
| !!! | TTTTCATCAATAATTAGTCT+TGG | + | chr5.2:14477405-14477424 | MS.gene063560:intron | 20.0% |
| ! | AGATCAAAAAGAGATCAAAT+TGG | + | chr5.2:14476848-14476867 | MS.gene063560:intron | 25.0% |
| ! | ATACCTTATATGTACAAAGT+TGG | + | chr5.2:14476669-14476688 | MS.gene063560:CDS | 25.0% |
| ! | ATTAGAAAAAAGGACACTAA+TGG | - | chr5.2:14476878-14476897 | None:intergenic | 25.0% |
| ! | CATTAGCAGATGAATTAATT+TGG | - | chr5.2:14477077-14477096 | None:intergenic | 25.0% |
| ! | TAGATTAATCAAAACAACTG+AGG | + | chr5.2:14476804-14476823 | MS.gene063560:intron | 25.0% |
| ! | TATTGATGAAAAAAGTAGCA+CGG | - | chr5.2:14477397-14477416 | None:intergenic | 25.0% |
| ! | TCTATGTCCCTTATTAAATT+TGG | - | chr5.2:14476070-14476089 | None:intergenic | 25.0% |
| !! | GTTAATAAAGTATCTATCAC+TGG | - | chr5.2:14477450-14477469 | None:intergenic | 25.0% |
| !!! | AATGTTTTGGAATTGTGATT+TGG | + | chr5.2:14476550-14476569 | MS.gene063560:intron | 25.0% |
| !!! | AATTGTTTTGCATTGTATAG+GGG | + | chr5.2:14477507-14477526 | MS.gene063560:intron | 25.0% |
| !!! | ACAATTGTTTTGCATTGTAT+AGG | + | chr5.2:14477505-14477524 | MS.gene063560:intron | 25.0% |
| !!! | CAATTGTTTTGCATTGTATA+GGG | + | chr5.2:14477506-14477525 | MS.gene063560:intron | 25.0% |
| AAACTCAAACAAGAAGTGAA+AGG | - | chr5.2:14477312-14477331 | None:intergenic | 30.0% | |
| AACTCAAACAAGAAGTGAAA+GGG | - | chr5.2:14477311-14477330 | None:intergenic | 30.0% | |
| AAGTATCTATCACTGGAAAT+TGG | - | chr5.2:14477443-14477462 | None:intergenic | 30.0% | |
| AATTATGTGTTCATGCATAC+AGG | + | chr5.2:14476926-14476945 | MS.gene063560:intron | 30.0% | |
| ACAATCACAATAAACAGGTA+TGG | - | chr5.2:14476599-14476618 | None:intergenic | 30.0% | |
| ACCTTACATCCAAATACTTA+TGG | - | chr5.2:14476319-14476338 | None:intergenic | 30.0% | |
| ATTATGTGTTCATGCATACA+GGG | + | chr5.2:14476927-14476946 | MS.gene063560:intron | 30.0% | |
| GATCCAACTTTGTACATATA+AGG | - | chr5.2:14476675-14476694 | None:intergenic | 30.0% | |
| TATATGTACAAAGTTGGATC+AGG | + | chr5.2:14476675-14476694 | MS.gene063560:CDS | 30.0% | |
| ! | ATCTTCTTTTCTAAACTGTG+AGG | - | chr5.2:14476987-14477006 | None:intergenic | 30.0% |
| ! | GAACAGCAATTTTGTTAAAG+AGG | + | chr5.2:14476958-14476977 | MS.gene063560:CDS | 30.0% |
| !! | CTAATGTTATTGCTTTTGCA+GGG | + | chr5.2:14477091-14477110 | MS.gene063560:intron | 30.0% |
| !! | TCAACACTTTTTACACTTAC+CGG | - | chr5.2:14476125-14476144 | None:intergenic | 30.0% |
| ACTCAAACAAGAAGTGAAAG+GGG | - | chr5.2:14477310-14477329 | None:intergenic | 35.0% | |
| ATTAGAGTGTGACCTTGTTA+TGG | - | chr5.2:14475902-14475921 | None:intergenic | 35.0% | |
| ATTCACGTCCTCTAATTCTA+CGG | + | chr5.2:14475866-14475885 | MS.gene063560:CDS | 35.0% | |
| CAACTGAGGTTTGATAGAAT+AGG | + | chr5.2:14476818-14476837 | MS.gene063560:intron | 35.0% | |
| GCCATAAGTATTTGGATGTA+AGG | + | chr5.2:14476315-14476334 | MS.gene063560:CDS | 35.0% | |
| TAGCACTCAACTAAAATGCT+AGG | - | chr5.2:14477338-14477357 | None:intergenic | 35.0% | |
| ! | TTTTTACACTTACCGGAAGT+TGG | - | chr5.2:14476118-14476137 | None:intergenic | 35.0% |
| !! | GCTAATGTTATTGCTTTTGC+AGG | + | chr5.2:14477090-14477109 | MS.gene063560:intron | 35.0% |
| !!! | TAGCATTTTAGTTGAGTGCT+AGG | + | chr5.2:14477337-14477356 | MS.gene063560:intron | 35.0% |
| !!! | TTTTGAGGTCAAAGCTTGTT+TGG | + | chr5.2:14477480-14477499 | MS.gene063560:intron | 35.0% |
| !!! | TTTTTTCAAAGCACGATGTG+TGG | + | chr5.2:14476212-14476231 | MS.gene063560:intron | 35.0% |
| AAGCACGATGTGTGGTTTAA+AGG | + | chr5.2:14476220-14476239 | MS.gene063560:intron | 40.0% | |
| ACATACAAAATCTCATGGCG+CGG | - | chr5.2:14477040-14477059 | None:intergenic | 40.0% | |
| AGCACGATGTGTGGTTTAAA+GGG | + | chr5.2:14476221-14476240 | MS.gene063560:intron | 40.0% | |
| CCTGCACAATCACAATAAAC+AGG | - | chr5.2:14476604-14476623 | None:intergenic | 40.0% | |
| CCTGTTTATTGTGATTGTGC+AGG | + | chr5.2:14476601-14476620 | MS.gene063560:intron | 40.0% | |
| CTCAAACAAGAAGTGAAAGG+GGG | - | chr5.2:14477309-14477328 | None:intergenic | 40.0% | |
| GTGTGGTTTAAAGGGGAATT+TGG | + | chr5.2:14476229-14476248 | MS.gene063560:CDS | 40.0% | |
| TAAGGTATGTTAATCGCACC+AGG | - | chr5.2:14476657-14476676 | None:intergenic | 40.0% | |
| TCTAGCTGGCCATAAGTATT+TGG | + | chr5.2:14476307-14476326 | MS.gene063560:CDS | 40.0% | |
| TGGTTTAAAGGGGAATTTGG+AGG | + | chr5.2:14476232-14476251 | MS.gene063560:CDS | 40.0% | |
| ! | AACCAAAGTGTTCCAACTTC+CGG | + | chr5.2:14476103-14476122 | MS.gene063560:CDS | 40.0% |
| ! | GTATGGAAAGTCGTGAGTTT+TGG | - | chr5.2:14476582-14476601 | None:intergenic | 40.0% |
| ! | TATGCTGCTTGGACTCAAAA+TGG | + | chr5.2:14477560-14477579 | MS.gene063560:CDS | 40.0% |
| ACCACGGAAGAGTTTAATGC+TGG | + | chr5.2:14476624-14476643 | MS.gene063560:CDS | 45.0% | |
| AGGACGTGAATGAAAGCAAG+CGG | - | chr5.2:14475857-14475876 | None:intergenic | 45.0% | |
| ATTGTGATTGTGCAGGACCA+CGG | + | chr5.2:14476608-14476627 | MS.gene063560:intron | 45.0% | |
| GCACGATGTGTGGTTTAAAG+GGG | + | chr5.2:14476222-14476241 | MS.gene063560:intron | 45.0% | |
| GCTTGGGAAAAGGTCTATGA+TGG | + | chr5.2:14477120-14477139 | MS.gene063560:CDS | 45.0% | |
| GGGAATTTGGAGGAAGTTGT+TGG | + | chr5.2:14476242-14476261 | MS.gene063560:CDS | 45.0% | |
| GTGTTCTGCCGTAGAATTAG+AGG | - | chr5.2:14475877-14475896 | None:intergenic | 45.0% | |
| TACCGGAAGTTGGAACACTT+TGG | - | chr5.2:14476108-14476127 | None:intergenic | 45.0% | |
| TCCAGCATTAAACTCTTCCG+TGG | - | chr5.2:14476628-14476647 | None:intergenic | 45.0% | |
| TGCATTGTATAGGGGTTCAC+CGG | + | chr5.2:14477515-14477534 | MS.gene063560:intron | 45.0% | |
| TGGACTGAAAGTCGAGTACA+CGG | + | chr5.2:14476448-14476467 | MS.gene063560:intron | 45.0% | |
| ! | TTTTGCAGGGTTGTCAGCTT+GGG | + | chr5.2:14477104-14477123 | MS.gene063560:intron | 45.0% |
| !!! | TATGTAATTTTTAAATTTAT+TGG | + | chr5.2:14476428-14476447 | MS.gene063560:intron | 5.0% |
| ACCAGCTATGTCTGTGAGTC+CGG | - | chr5.2:14477537-14477556 | None:intergenic | 50.0% | |
| ACGTGAATGAAAGCAAGCGG+CGG | - | chr5.2:14475854-14475873 | None:intergenic | 50.0% | |
| AGGGTTGTCAGCTTGGGAAA+AGG | + | chr5.2:14477110-14477129 | MS.gene063560:intron | 50.0% | |
| GGCAGAACACGACCATAACA+AGG | + | chr5.2:14475887-14475906 | MS.gene063560:CDS | 50.0% | |
| TAGCTGGTGGTTATGCTGCT+TGG | + | chr5.2:14477549-14477568 | MS.gene063560:CDS | 50.0% | |
| TTTAATGCTGGACACGCTCC+TGG | + | chr5.2:14476636-14476655 | MS.gene063560:CDS | 50.0% | |
| ! | CTTTTGCAGGGTTGTCAGCT+TGG | + | chr5.2:14477103-14477122 | MS.gene063560:intron | 50.0% |
| AAAATCTCATGGCGCGGCGA+AGG | - | chr5.2:14477034-14477053 | None:intergenic | 55.0% | |
| ACCGGACTCACAGACATAGC+TGG | + | chr5.2:14477533-14477552 | MS.gene063560:CDS | 55.0% | |
| GCTCACGAGCTTCTTCTAGC+TGG | + | chr5.2:14476293-14476312 | MS.gene063560:CDS | 55.0% | |
| GGACTCACAGACATAGCTGG+TGG | + | chr5.2:14477536-14477555 | MS.gene063560:CDS | 55.0% | |
| ! | ACACGCACTGGCACTGAAGT+TGG | - | chr5.2:14476272-14476291 | None:intergenic | 55.0% |
| AGCTCGTGAGCTACACGCAC+TGG | - | chr5.2:14476284-14476303 | None:intergenic | 60.0% | |
| GCAAGCGGCGGAGACATCAA+AGG | - | chr5.2:14475842-14475861 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 14475826 | 14477601 | 14475826 | ID=MS.gene063560 |
| chr5.2 | mRNA | 14475826 | 14477601 | 14475826 | ID=MS.gene063560.t1;Parent=MS.gene063560 |
| chr5.2 | exon | 14475826 | 14475908 | 14475826 | ID=MS.gene063560.t1.exon1;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14475826 | 14475908 | 14475826 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14476047 | 14476124 | 14476047 | ID=MS.gene063560.t1.exon2;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14476047 | 14476124 | 14476047 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14476223 | 14476336 | 14476223 | ID=MS.gene063560.t1.exon3;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14476223 | 14476336 | 14476223 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14476623 | 14476696 | 14476623 | ID=MS.gene063560.t1.exon4;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14476623 | 14476696 | 14476623 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14476948 | 14477018 | 14476948 | ID=MS.gene063560.t1.exon5;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14476948 | 14477018 | 14476948 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14477112 | 14477165 | 14477112 | ID=MS.gene063560.t1.exon6;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14477112 | 14477165 | 14477112 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| chr5.2 | exon | 14477527 | 14477601 | 14477527 | ID=MS.gene063560.t1.exon7;Parent=MS.gene063560.t1 |
| chr5.2 | CDS | 14477527 | 14477601 | 14477527 | ID=cds.MS.gene063560.t1;Parent=MS.gene063560.t1 |
| Gene Sequence |
| Protein sequence |
