AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06365

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06365.t1 MTR_3g096800 95.597 477 21 0 1 477 1 477 0.0 947
MS.gene06365.t1 MTR_3g096830 71.767 464 129 1 11 474 4 465 0.0 674
MS.gene06365.t1 MTR_3g096840 65.417 480 160 1 1 474 1 480 0.0 661
MS.gene06365.t1 MTR_3g088455 63.410 481 170 3 1 477 1 479 0.0 652
MS.gene06365.t1 MTR_8g094290 67.627 451 146 0 27 477 25 475 0.0 652
MS.gene06365.t1 MTR_3g088475 62.448 482 174 4 1 477 1 480 0.0 634
MS.gene06365.t1 MTR_4g073520 59.794 485 183 3 5 477 28 512 0.0 619
MS.gene06365.t1 MTR_4g073520 59.794 485 183 3 5 477 28 512 0.0 619
MS.gene06365.t1 MTR_1g029750 61.667 480 177 3 5 477 4 483 0.0 609
MS.gene06365.t1 MTR_1g007380 52.790 466 213 4 18 476 6 471 0.0 533
MS.gene06365.t1 MTR_3g110660 51.452 482 227 5 1 476 1 481 0.0 530
MS.gene06365.t1 MTR_1g105980 54.167 456 204 2 26 476 15 470 0.0 524
MS.gene06365.t1 MTR_1g105995 52.174 460 215 3 20 474 8 467 1.27e-176 504
MS.gene06365.t1 MTR_3g088465 62.694 386 137 4 1 381 1 384 1.19e-175 499
MS.gene06365.t1 MTR_1g105990 52.516 457 209 3 20 468 8 464 1.06e-174 499
MS.gene06365.t1 MTR_1g106000 50.437 458 213 4 33 476 15 472 7.83e-170 486
MS.gene06365.t1 MTR_1g007270 47.589 477 240 4 1 474 1 470 2.76e-164 473
MS.gene06365.t1 MTR_3g461440 49.550 444 219 2 26 466 16 457 3.28e-164 472
MS.gene06365.t1 MTR_3g461470 49.550 444 219 2 26 466 16 457 2.86e-162 467
MS.gene06365.t1 MTR_3g061390 49.550 444 219 2 26 466 16 457 1.71e-160 462
MS.gene06365.t1 MTR_3g110420 47.598 458 227 5 24 473 15 467 8.89e-156 451
MS.gene06365.t1 MTR_5g096840 45.842 469 245 4 2 466 1 464 5.64e-155 449
MS.gene06365.t1 MTR_3g461430 48.055 437 222 2 30 463 27 461 4.54e-154 448
MS.gene06365.t1 MTR_3g461480 48.043 460 233 3 10 465 4 461 4.86e-149 433
MS.gene06365.t1 MTR_1g007240 46.374 455 231 5 27 474 6 454 3.59e-147 428
MS.gene06365.t1 MTR_1g007180 44.835 455 238 5 27 474 6 454 4.92e-147 428
MS.gene06365.t1 MTR_2g031750 45.197 458 243 5 21 474 1 454 5.32e-146 425
MS.gene06365.t1 MTR_3g110430 46.072 471 247 4 9 473 33 502 7.89e-141 414
MS.gene06365.t1 MTR_3g110660 54.810 343 151 4 1 340 1 342 1.25e-133 391
MS.gene06365.t1 MTR_5g096850 43.836 438 240 4 33 466 25 460 2.96e-127 378
MS.gene06365.t1 MTR_3g461440 48.910 321 159 2 149 466 2 320 1.65e-114 340
MS.gene06365.t1 MTR_2g031750 43.229 384 211 4 95 474 7 387 8.64e-113 338
MS.gene06365.t1 MTR_3g110420 47.516 322 160 3 24 340 15 332 1.56e-103 313
MS.gene06365.t1 MTR_5g017200 63.415 246 79 3 27 272 26 260 2.46e-98 297
MS.gene06365.t1 MTR_1g007180 41.584 303 170 4 176 474 71 370 8.94e-82 258
MS.gene06365.t1 MTR_6g022790 29.801 453 268 10 33 474 42 455 6.91e-49 174
MS.gene06365.t1 MTR_1g007190 43.439 221 88 4 43 263 20 203 5.94e-48 164
MS.gene06365.t1 MTR_2g101920 29.464 448 263 11 4 438 18 425 7.48e-48 171
MS.gene06365.t1 MTR_5g054730 32.334 467 254 16 20 470 15 435 1.06e-46 167
MS.gene06365.t1 MTR_8g080120 28.728 456 282 12 28 474 15 436 2.65e-45 164
MS.gene06365.t1 MTR_1g070470 27.313 454 291 13 27 473 16 437 1.49e-44 162
MS.gene06365.t1 MTR_4g103890 28.728 456 261 14 34 471 11 420 2.24e-43 158
MS.gene06365.t1 MTR_1g093020 30.238 463 286 11 13 470 3 433 1.14e-42 157
MS.gene06365.t1 MTR_1g093020 30.947 433 262 11 13 440 3 403 4.73e-42 154
MS.gene06365.t1 MTR_7g038910 28.664 464 294 10 17 474 11 443 1.29e-39 149
MS.gene06365.t1 MTR_6g022780 29.268 451 272 10 34 474 15 428 1.53e-39 148
MS.gene06365.t1 MTR_1g093030 28.665 457 268 10 29 470 20 433 6.63e-39 146
MS.gene06365.t1 MTR_6g023075 29.095 464 279 11 24 474 2 428 8.75e-39 146
MS.gene06365.t1 MTR_7g038910 28.497 386 239 10 17 396 11 365 6.20e-38 143
MS.gene06365.t1 MTR_4g055610 27.004 474 284 14 27 475 25 461 2.34e-37 142
MS.gene06365.t1 MTR_7g038910 29.769 346 220 8 17 356 11 339 7.25e-37 139
MS.gene06365.t1 MTR_3g005740 29.754 447 278 10 34 474 53 469 1.98e-36 140
MS.gene06365.t1 MTR_6g023065 27.500 480 306 13 3 474 18 463 9.04e-36 138
MS.gene06365.t1 MTR_2g096830 28.696 460 286 10 24 474 2 428 2.43e-35 136
MS.gene06365.t1 MTR_8g099320 26.501 483 304 17 7 476 6 450 7.93e-34 132
MS.gene06365.t1 MTR_3g085820 27.000 400 253 11 4 398 5 370 1.59e-32 128
MS.gene06365.t1 MTR_1g492640 26.966 445 280 16 44 476 70 481 1.93e-32 129
MS.gene06365.t1 MTR_2g096830 29.377 337 209 9 24 351 2 318 8.72e-31 122
MS.gene06365.t1 MTR_4g075750 25.104 482 316 16 11 472 45 501 2.95e-29 120
MS.gene06365.t1 MTR_0531s0020 30.247 324 200 9 33 350 49 352 4.60e-29 117
MS.gene06365.t1 MTR_3g115090 25.216 464 282 14 27 464 75 499 2.00e-28 118
MS.gene06365.t1 MTR_5g023260 23.810 462 306 12 19 465 93 523 3.51e-23 102
MS.gene06365.t1 MTR_5g081630 25.962 416 267 14 64 475 4 382 8.36e-23 100
MS.gene06365.t1 MTR_1g492640 26.913 379 233 15 110 476 3 349 1.05e-21 96.7
MS.gene06365.t1 MTR_5g023240 23.341 437 286 12 20 440 73 476 9.44e-21 95.5
MS.gene06365.t1 MTR_1g492640 27.476 313 197 13 44 346 52 344 1.21e-20 93.6
MS.gene06365.t1 MTR_1g492640 27.476 313 197 13 44 346 70 362 1.45e-20 93.6
MS.gene06365.t1 MTR_2g012470 24.845 483 290 18 19 472 81 519 5.55e-18 87.0
MS.gene06365.t1 MTR_4g104510 23.239 426 264 15 64 475 71 447 3.12e-16 81.3
MS.gene06365.t1 MTR_4g104510 22.353 425 271 12 64 475 71 449 9.03e-16 79.7
MS.gene06365.t1 MTR_3g069960 24.059 478 290 18 22 475 7 435 1.34e-14 76.3
MS.gene06365.t1 MTR_3g069960 23.529 408 257 15 79 475 19 382 2.23e-13 72.0
MS.gene06365.t1 MTR_1g492640 27.485 171 110 6 44 212 70 228 4.02e-11 63.9
MS.gene06365.t1 MTR_1g492640 27.485 171 110 6 44 212 52 210 4.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06365.t1 AT5G09220 64.819 469 161 2 13 477 25 493 0.0 656
MS.gene06365.t1 AT1G77380 65.517 464 157 1 17 477 13 476 0.0 649
MS.gene06365.t1 AT5G63850 64.912 456 156 2 26 477 11 466 0.0 642
MS.gene06365.t1 AT1G44100 59.158 475 184 4 12 477 7 480 0.0 610
MS.gene06365.t1 AT5G49630 56.798 456 191 4 26 475 25 480 0.0 528
MS.gene06365.t1 AT1G10010 53.642 453 206 2 27 475 21 473 0.0 526
MS.gene06365.t1 AT1G10010 53.642 453 206 2 27 475 22 474 0.0 526
MS.gene06365.t1 AT1G58360 53.145 461 211 3 22 477 24 484 0.0 524
MS.gene06365.t1 AT5G23810 47.748 444 216 6 7 442 5 440 7.95e-137 402
MS.gene06365.t1 AT5G23810 48.538 342 165 5 7 345 5 338 4.23e-101 307
MS.gene06365.t1 AT5G23810 46.586 249 124 4 18 263 14 256 1.50e-67 218
MS.gene06365.t1 AT5G23810 45.972 211 105 4 7 214 5 209 1.44e-53 180
MS.gene06365.t1 AT5G23810 45.972 211 105 4 7 214 5 209 1.44e-53 180
MS.gene06365.t1 AT1G48640 29.325 474 294 12 7 474 15 453 2.68e-47 170
MS.gene06365.t1 AT5G40780 29.663 445 277 10 34 474 34 446 2.55e-46 167
MS.gene06365.t1 AT1G67640 29.736 454 280 11 28 474 20 441 1.30e-42 157
MS.gene06365.t1 AT5G40780 29.535 430 267 10 49 474 1 398 1.91e-42 155
MS.gene06365.t1 AT5G40780 29.535 430 267 10 49 474 1 398 1.91e-42 155
MS.gene06365.t1 AT1G61270 27.193 456 293 12 22 469 19 443 6.98e-41 152
MS.gene06365.t1 AT1G24400 28.510 463 274 15 28 474 20 441 9.70e-41 152
MS.gene06365.t1 AT3G01760 25.214 468 306 11 16 468 3 441 8.76e-40 149
MS.gene06365.t1 AT1G25530 28.477 453 270 11 32 471 26 437 6.81e-37 141
MS.gene06365.t1 AT1G71680 27.423 485 291 14 7 474 8 448 9.53e-35 135
MS.gene06365.t1 AT1G08230 29.231 455 279 14 33 475 27 450 1.61e-32 129
MS.gene06365.t1 AT1G71680 28.532 361 211 12 7 350 8 338 3.00e-30 121
MS.gene06365.t1 AT5G41800 25.219 456 297 12 33 476 26 449 4.67e-26 110
MS.gene06365.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene06365.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene06365.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene06365.t1 AT1G08230 30.745 322 193 9 163 475 50 350 3.15e-24 103
MS.gene06365.t1 AT2G39890 24.519 416 273 14 64 475 63 441 2.42e-21 96.7
MS.gene06365.t1 AT2G39890 24.519 416 273 14 64 475 63 441 2.42e-21 96.7
MS.gene06365.t1 AT2G39890 24.519 416 273 14 64 475 4 382 3.14e-21 95.9
MS.gene06365.t1 AT2G36590 24.632 475 309 17 9 475 2 435 5.78e-21 95.5
MS.gene06365.t1 AT3G55740 24.940 417 270 13 64 475 60 438 1.02e-20 94.7
MS.gene06365.t1 AT3G55740 25.120 418 268 14 64 475 4 382 1.26e-20 94.0
MS.gene06365.t1 AT3G55740 25.120 418 268 14 64 475 4 382 1.26e-20 94.0
MS.gene06365.t1 AT1G47670 24.895 474 301 15 19 472 79 517 2.90e-18 87.8
MS.gene06365.t1 AT4G35180 23.529 459 292 13 34 473 58 476 2.57e-16 81.6
MS.gene06365.t1 AT4G35180 25.271 277 187 5 33 305 57 317 2.72e-13 71.2
MS.gene06365.t1 AT2G36590 24.332 337 224 12 9 340 2 312 9.78e-12 66.6

Find 113 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTAGAACTCCATTT+TGG 0.108522 3.1:+77161796 None:intergenic
GTTCAGTACTTGTATCTTTA+TGG 0.129160 3.1:-77163659 MS.gene06365:CDS
TCCTTTCTTTAATGATGTTC+TGG 0.137749 3.1:-77161896 MS.gene06365:CDS
TTCTTGGAGCAGTGGGATTT+TGG 0.180772 3.1:-77161870 MS.gene06365:CDS
AATGATGTTCTGGGATTTCT+TGG 0.212555 3.1:-77161886 MS.gene06365:CDS
ACTGGATAATAAACTGTTAA+AGG 0.224075 3.1:+77161847 None:intergenic
TCAAATTCTCATTGAAATTC+AGG 0.231508 3.1:-77162421 MS.gene06365:intron
CCATCGTCGTCGAAGTATTC+AGG 0.273974 3.1:+77164528 None:intergenic
TAAATCTATTTAGATTAGTT+TGG 0.281769 3.1:-77161963 MS.gene06365:CDS
CCTTTCTTTAATGATGTTCT+GGG 0.306108 3.1:-77161895 MS.gene06365:CDS
TCCCAAAATGGAGTTCTAAA+TGG 0.320619 3.1:-77161798 MS.gene06365:CDS
TGAATGGCTTGTAATGCTTT+AGG 0.330057 3.1:+77161692 None:intergenic
TCCAGCTTGGCTCATCGATT+TGG 0.332874 3.1:-77162136 MS.gene06365:CDS
TATCTTTATGGCAGTGCAAT+AGG 0.337033 3.1:-77163647 MS.gene06365:CDS
ATAGCTGCAATAATGTCTTT+TGG 0.346313 3.1:-77162912 MS.gene06365:CDS
AGCATGGGCTACGGCACAAT+TGG 0.349061 3.1:-77164147 MS.gene06365:CDS
TCTAGATGTCTCCATTTATC+AGG 0.357700 3.1:-77163047 MS.gene06365:CDS
AACGACGATAACCTGCTGTT+TGG 0.358251 3.1:+77162856 None:intergenic
AACCCATACATGATCAGTTT+TGG 0.359942 3.1:-77162996 MS.gene06365:CDS
ATCAACTCACATCATGCTAA+TGG 0.372993 3.1:+77163607 None:intergenic
TTCTGAAGGGACACCATCTA+TGG 0.373125 3.1:+77164557 None:intergenic
TAATGTGTACCTGTTCGTTT+AGG 0.376426 3.1:+77164501 None:intergenic
TGCATGGGCTATGCTGCATT+TGG 0.377828 3.1:-77162204 MS.gene06365:CDS
CTAAATAGATTTAGATTGTA+AGG 0.384304 3.1:+77161973 None:intergenic
GATGCAGTTCGTAGCATTCT+TGG 0.385053 3.1:-77163999 MS.gene06365:intron
CATATAATAACAGCTGTGAT+TGG 0.385307 3.1:-77164188 MS.gene06365:CDS
GTATCAGTTGTGGCTGCTCT+TGG 0.389248 3.1:-77161739 MS.gene06365:CDS
CTTTAGGTCCTCTATAATAC+TGG 0.396377 3.1:+77161708 None:intergenic
GGGTTGGATTGGTGGTCCTT+TGG 0.399149 3.1:-77164126 MS.gene06365:CDS
ATAACAGCTGTGATTGGGTC+TGG 0.401374 3.1:-77164182 MS.gene06365:CDS
GTTATGAGTCAGGAACAATA+TGG 0.405471 3.1:-77164223 MS.gene06365:intron
ACTCCAAAACTGATCATGTA+TGG 0.410066 3.1:+77162993 None:intergenic
CTGGGATTTCTTGGAGCAGT+GGG 0.412618 3.1:-77161877 MS.gene06365:CDS
TGCAAAGGAAGATCCCAAAA+TGG 0.417168 3.1:-77161810 MS.gene06365:CDS
ACGACGATAACCTGCTGTTT+GGG 0.418197 3.1:+77162857 None:intergenic
ACAAAGTGACGAGGCTGAAA+AGG 0.428865 3.1:+77164096 None:intergenic
TTATTTGCTTTGTGGCTGCA+TGG 0.440989 3.1:-77162220 MS.gene06365:CDS
ACCTTCAAGGGTACTCTCAC+TGG 0.442148 3.1:-77162531 MS.gene06365:CDS
AACAGAAAATGGTACCTTCA+AGG 0.444400 3.1:-77162544 MS.gene06365:intron
AACCGGAGCCATTCCATAGA+TGG 0.448209 3.1:-77164570 MS.gene06365:CDS
CTGGGGTGCTATCCTTAGCA+TGG 0.450709 3.1:-77164163 MS.gene06365:CDS
GTCTTTGCCTTCGTAGAGAA+AGG 0.451734 3.1:-77162057 MS.gene06365:CDS
TCAACTCACATCATGCTAAT+GGG 0.455025 3.1:+77163608 None:intergenic
AAGAAGAAATAGAAAGAAAC+CGG 0.458125 3.1:-77164587 MS.gene06365:CDS
ACATTGCAACAAAAGTAGTT+AGG 0.463138 3.1:+77161923 None:intergenic
CTATTCCACAAACCGTGTAT+TGG 0.465036 3.1:+77163681 None:intergenic
GCATGGGCTACGGCACAATT+GGG 0.465627 3.1:-77164146 MS.gene06365:CDS
TCCAGTGAGAGTACCCTTGA+AGG 0.465923 3.1:+77162530 None:intergenic
GCACAATTGGGTTGGATTGG+TGG 0.466018 3.1:-77164134 MS.gene06365:CDS
TAAGGACGAAAACCCGGGAT+TGG 0.471537 3.1:+77161991 None:intergenic
GTCAACAACAACAAAATTGT+GGG 0.475137 3.1:-77162490 MS.gene06365:CDS
GCCAAATCGATGAGCCAAGC+TGG 0.477067 3.1:+77162135 None:intergenic
GGGCGCCAATACACGGTTTG+TGG 0.479067 3.1:-77163686 MS.gene06365:CDS
TATTTGCTTTGTGGCTGCAT+GGG 0.481138 3.1:-77162219 MS.gene06365:CDS
TAGCTTCTCTTTCCATGCAC+AGG 0.488301 3.1:+77164032 None:intergenic
ATATAATAACAGCTGTGATT+GGG 0.488499 3.1:-77164187 MS.gene06365:CDS
GGGCTACGGCACAATTGGGT+TGG 0.489975 3.1:-77164142 MS.gene06365:CDS
TGCTGCTCCTTTCTCTACGA+AGG 0.498588 3.1:+77162050 None:intergenic
GCCGTCGTAATCCACCTTGT+GGG 0.501113 3.1:-77162105 MS.gene06365:CDS
CCCAGAACATCATTAAAGAA+AGG 0.503059 3.1:+77161895 None:intergenic
GCACCAGGGAACTTGCTCAC+TGG 0.503377 3.1:-77162174 MS.gene06365:CDS
TTCTCTACGAAGGCAAAGAC+AGG 0.507161 3.1:+77162060 None:intergenic
CTCAACCGCCAGTATTATAG+AGG 0.511484 3.1:-77161716 MS.gene06365:CDS
ATGCTTTATTGTATCAGTTG+TGG 0.512651 3.1:-77161749 MS.gene06365:CDS
GATGGTCGTCCTAAACGAAC+AGG 0.514219 3.1:-77164510 MS.gene06365:intron
TTAGCAATTTCCCAAACAGC+AGG 0.515563 3.1:-77162867 MS.gene06365:intron
TAACAGCTGTGATTGGGTCT+GGG 0.516920 3.1:-77164181 MS.gene06365:CDS
ACAGAAAATGGTACCTTCAA+GGG 0.518566 3.1:-77162543 MS.gene06365:intron
TGTCAACAACAACAAAATTG+TGG 0.522475 3.1:-77162491 MS.gene06365:CDS
GATTGTAAGGACGAAAACCC+GGG 0.523575 3.1:+77161986 None:intergenic
GGAACACAAAATTCCAATCC+CGG 0.528501 3.1:-77162004 MS.gene06365:CDS
GCATTTGGAGAACAAGCACC+AGG 0.529176 3.1:-77162189 MS.gene06365:CDS
CACCATCTATGGAATGGCTC+CGG 0.534833 3.1:+77164568 None:intergenic
TGCCGTCGTAATCCACCTTG+TGG 0.547983 3.1:-77162106 MS.gene06365:CDS
ACGGCACAATTGGGTTGGAT+TGG 0.551307 3.1:-77164137 MS.gene06365:CDS
TATTCAGGATCAAGTTCTGA+AGG 0.553591 3.1:+77164543 None:intergenic
AAGATGGCCCCAAACAAAAG+TGG 0.554048 3.1:-77162025 MS.gene06365:CDS
GCTCAATACTCTGAGCTGAA+TGG 0.555896 3.1:+77161676 None:intergenic
AGACAGGTTGAACATATACT+TGG 0.557340 3.1:+77162076 None:intergenic
TGCAGGCGGGCGCCAATACA+CGG 0.557733 3.1:-77163693 MS.gene06365:intron
AGATTGTAAGGACGAAAACC+CGG 0.560505 3.1:+77161985 None:intergenic
CTCCAAAACTGATCATGTAT+GGG 0.563692 3.1:+77162994 None:intergenic
TCTGGGATTTCTTGGAGCAG+TGG 0.566045 3.1:-77161878 MS.gene06365:CDS
AATCCAGTGAGCAAGTTCCC+TGG 0.566335 3.1:+77162171 None:intergenic
TTTAACAGTTTATTATCCAG+TGG 0.568524 3.1:-77161845 MS.gene06365:CDS
TGCAAGATATACATCTCCAC+TGG 0.575990 3.1:+77161829 None:intergenic
TGGGGTGCTATCCTTAGCAT+GGG 0.576138 3.1:-77164162 MS.gene06365:CDS
TTAGTATGTACAATCCAGCT+TGG 0.584076 3.1:-77162149 MS.gene06365:CDS
AACAGCTGTGATTGGGTCTG+GGG 0.588270 3.1:-77164180 MS.gene06365:CDS
GAACACAAAATTCCAATCCC+GGG 0.593016 3.1:-77162003 MS.gene06365:CDS
AAGGGACACCATCTATGGAA+TGG 0.597405 3.1:+77164562 None:intergenic
CCTGAATACTTCGACGACGA+TGG 0.603286 3.1:-77164528 MS.gene06365:CDS
TTGTGCCGTAGCCCATGCTA+AGG 0.606269 3.1:+77164151 None:intergenic
TGGAGATGTATATCTTGCAA+AGG 0.629124 3.1:-77161825 MS.gene06365:CDS
TTGAGAGTATGAATAAGCAA+AGG 0.634614 3.1:+77162440 None:intergenic
AGATGTCTCCATTTATCAGG+AGG 0.634869 3.1:-77163044 MS.gene06365:CDS
TAGGTCCTCTATAATACTGG+CGG 0.635831 3.1:+77161711 None:intergenic
CTAGCTGAATGTTATCGTTG+TGG 0.636182 3.1:-77164059 MS.gene06365:CDS
CGTTGTGGAGATCCTGTGCA+TGG 0.641437 3.1:-77164044 MS.gene06365:CDS
TTCCAGAGTTTCATAATACG+TGG 0.645176 3.1:-77162947 MS.gene06365:CDS
CACCACGTATTATGAAACTC+TGG 0.648752 3.1:+77162945 None:intergenic
ATTCAGGATCAAGTTCTGAA+GGG 0.648974 3.1:+77164544 None:intergenic
TTCAAGGGTACTCTCACTGG+AGG 0.649496 3.1:-77162528 MS.gene06365:CDS
GGGTTGCTTGACATGTGACA+TGG 0.650556 3.1:+77163014 None:intergenic
CTGAAAAGGATCATCACCAA+AGG 0.653603 3.1:+77164110 None:intergenic
TCAACAACAACAAAATTGTG+GGG 0.655949 3.1:-77162489 MS.gene06365:CDS
GCTATCCTTAGCATGGGCTA+CGG 0.662463 3.1:-77164156 MS.gene06365:CDS
CAGAGTTTCATAATACGTGG+TGG 0.670066 3.1:-77162944 MS.gene06365:CDS
CTTGGTATGCTCCCACAAGG+TGG 0.675365 3.1:+77162094 None:intergenic
ATACTTGGTATGCTCCCACA+AGG 0.692310 3.1:+77162091 None:intergenic
ATGAAGTATACAAAGTGACG+AGG 0.719582 3.1:+77164087 None:intergenic
TCCCACAAGGTGGATTACGA+CGG 0.722373 3.1:+77162104 None:intergenic
CATTTGGAGAACAAGCACCA+GGG 0.723647 3.1:-77162188 MS.gene06365:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAATTAATT+CGG - chr3.1:77163671-77163690 MS.gene06365:CDS 0.0%
!! AAAAAAAAAAAATTAATTCG+GGG - chr3.1:77163673-77163692 MS.gene06365:CDS 10.0%
!!! ATTTTAATTAAGATAAAGAA+AGG + chr3.1:77163894-77163913 None:intergenic 10.0%
!!! TTATATAATTTTACGTTAAA+TGG - chr3.1:77161804-77161823 MS.gene06365:CDS 10.0%
!!! TTTTAATTAAGATAAAGAAA+GGG + chr3.1:77163893-77163912 None:intergenic 10.0%
!!! TTTTTATGTCTAATTTTTAT+GGG - chr3.1:77161981-77162000 MS.gene06365:CDS 10.0%
!!! TTTTTTATGTCTAATTTTTA+TGG - chr3.1:77161980-77161999 MS.gene06365:CDS 10.0%
!! AAAAAAAAAAAAACCATTGA+TGG - chr3.1:77163046-77163065 MS.gene06365:CDS 15.0%
!! ATATATTAATTACCATTAGT+GGG - chr3.1:77162859-77162878 MS.gene06365:intron 15.0%
!!! AAAGCATGTATATTATTTTT+TGG - chr3.1:77162459-77162478 MS.gene06365:CDS 15.0%
!!! TAAATCTATTTAGATTAGTT+TGG - chr3.1:77164309-77164328 MS.gene06365:intron 15.0%
!!! TGATGAGTTTATTTTAATTT+GGG - chr3.1:77163183-77163202 MS.gene06365:intron 15.0%
!!! TTGATGAGTTTATTTTAATT+TGG - chr3.1:77163182-77163201 MS.gene06365:intron 15.0%
!! ATAAGTATAACCTAAAAAGA+AGG - chr3.1:77163003-77163022 MS.gene06365:CDS 20.0%
!! ATGCTTGTAAAAGATAATTA+CGG + chr3.1:77162699-77162718 None:intergenic 20.0%
!! CTAAATAGATTTAGATTGTA+AGG + chr3.1:77164302-77164321 None:intergenic 20.0%
!! GATATATTAATTACCATTAG+TGG - chr3.1:77162858-77162877 MS.gene06365:intron 20.0%
!! TCTTACTTCTATTATTGATA+GGG - chr3.1:77163140-77163159 MS.gene06365:intron 20.0%
!!! AATGTGTTTGTATTTAAGAT+CGG - chr3.1:77162392-77162411 MS.gene06365:intron 20.0%
!!! ACTGATTTTTAAACAGAAAA+TGG - chr3.1:77163717-77163736 MS.gene06365:intron 20.0%
!!! ATTCTTCATCGTTTTTATTT+CGG + chr3.1:77163997-77164016 None:intergenic 20.0%
!!! TATATATTTTTACTACACAC+AGG - chr3.1:77163950-77163969 MS.gene06365:intron 20.0%
!!! TGTGTTAAATTTTCATTACT+AGG + chr3.1:77162019-77162038 None:intergenic 20.0%
!!! TTAAATTTTCATTACTAGGA+GGG + chr3.1:77162015-77162034 None:intergenic 20.0%
!!! TTTTTTTTTTGTTATGAGTC+AGG - chr3.1:77162039-77162058 MS.gene06365:CDS 20.0%
! AAGAAGAAATAGAAAGAAAC+CGG - chr3.1:77161685-77161704 MS.gene06365:CDS 25.0%
! ACTGGATAATAAACTGTTAA+AGG + chr3.1:77164428-77164447 None:intergenic 25.0%
! ATATAATAACAGCTGTGATT+GGG - chr3.1:77162085-77162104 MS.gene06365:CDS 25.0%
! ATTCTTGATCATGTACTTTA+CGG - chr3.1:77163582-77163601 MS.gene06365:intron 25.0%
! GAATTTCACAAGTTTACATT+TGG - chr3.1:77161898-77161917 MS.gene06365:CDS 25.0%
! GATGTAATATTCTTAAGAGT+TGG - chr3.1:77162518-77162537 MS.gene06365:CDS 25.0%
! GTCTTACTTCTATTATTGAT+AGG - chr3.1:77163139-77163158 MS.gene06365:intron 25.0%
! TCAAATTCTCATTGAAATTC+AGG - chr3.1:77163851-77163870 MS.gene06365:intron 25.0%
! TGTAAAAGATAATTACGGTA+TGG + chr3.1:77162694-77162713 None:intergenic 25.0%
! TTTAACAGTTTATTATCCAG+TGG - chr3.1:77164427-77164446 MS.gene06365:intron 25.0%
!! ACAAATGCTAATAGGTATTT+TGG + chr3.1:77163121-77163140 None:intergenic 25.0%
!! CAATATCAATCCTTCTTTTT+AGG + chr3.1:77163016-77163035 None:intergenic 25.0%
!! GTTAAATTTTCATTACTAGG+AGG + chr3.1:77162016-77162035 None:intergenic 25.0%
!! TAGTTTCAAACATAATTTGC+AGG - chr3.1:77162562-77162581 MS.gene06365:intron 25.0%
!!! ACATATTTTTGATCCATCAA+TGG + chr3.1:77163062-77163081 None:intergenic 25.0%
!!! TTATTTTAATTTGGGTGACA+GGG - chr3.1:77163191-77163210 MS.gene06365:intron 25.0%
!!! TTTATTTTAATTTGGGTGAC+AGG - chr3.1:77163190-77163209 MS.gene06365:intron 25.0%
ACATTGCAACAAAAGTAGTT+AGG + chr3.1:77164352-77164371 None:intergenic 30.0%
ATCAAACAATTGTACTCAAG+TGG - chr3.1:77163507-77163526 MS.gene06365:intron 30.0%
CATATAATAACAGCTGTGAT+TGG - chr3.1:77162084-77162103 MS.gene06365:CDS 30.0%
CCTTTCTTTAATGATGTTCT+GGG - chr3.1:77164377-77164396 MS.gene06365:intron 30.0%
GAAGTAAGACAAATGCTAAT+AGG + chr3.1:77163129-77163148 None:intergenic 30.0%
GTCAACAACAACAAAATTGT+GGG - chr3.1:77163782-77163801 MS.gene06365:intron 30.0%
GTTCAGTACTTGTATCTTTA+TGG - chr3.1:77162613-77162632 MS.gene06365:intron 30.0%
TCAACAACAACAAAATTGTG+GGG - chr3.1:77163783-77163802 MS.gene06365:intron 30.0%
TCCTTTCTTTAATGATGTTC+TGG - chr3.1:77164376-77164395 MS.gene06365:intron 30.0%
TGTCAACAACAACAAAATTG+TGG - chr3.1:77163781-77163800 MS.gene06365:intron 30.0%
TTACATCCAAAAGTAGAACT+TGG + chr3.1:77163560-77163579 None:intergenic 30.0%
TTTGCTTGTATTTAAGAGCA+TGG + chr3.1:77162339-77162358 None:intergenic 30.0%
! AAAGAGAAGCTATACTTTTG+TGG - chr3.1:77162251-77162270 MS.gene06365:CDS 30.0%
! AGAACTTGGTTCTCTAAATT+TGG + chr3.1:77163546-77163565 None:intergenic 30.0%
! ATAGCTGCAATAATGTCTTT+TGG - chr3.1:77163360-77163379 MS.gene06365:intron 30.0%
! ATGCTTTATTGTATCAGTTG+TGG - chr3.1:77164523-77164542 MS.gene06365:CDS 30.0%
! TTGAGAGTATGAATAAGCAA+AGG + chr3.1:77163835-77163854 None:intergenic 30.0%
! TTGCTTGTATTTAAGAGCAT+GGG + chr3.1:77162338-77162357 None:intergenic 30.0%
! TTTCAAACATAATTTGCAGG+CGG - chr3.1:77162565-77162584 MS.gene06365:intron 30.0%
!! ACAGCATTTTATTTGCTTTG+TGG - chr3.1:77164044-77164063 MS.gene06365:CDS 30.0%
!! ATCCATTTAGAACTCCATTT+TGG + chr3.1:77164479-77164498 None:intergenic 30.0%
!! TCCATTTAGAACTCCATTTT+GGG + chr3.1:77164478-77164497 None:intergenic 30.0%
!! TTCATCGTTTTTATTTCGGA+TGG + chr3.1:77163993-77164012 None:intergenic 30.0%
!! TTTGTGTTCCACTTTTGTTT+GGG + chr3.1:77164258-77164277 None:intergenic 30.0%
!! TTTTGTGTTCCACTTTTGTT+TGG + chr3.1:77164259-77164278 None:intergenic 30.0%
!!! GAGTTCTAAATGGATTTTGT+TGG - chr3.1:77164484-77164503 MS.gene06365:intron 30.0%
!!! TGTTAACAGTCTCGTTTTTT+GGG + chr3.1:77163641-77163660 None:intergenic 30.0%
AACAGAAAATGGTACCTTCA+AGG - chr3.1:77163728-77163747 MS.gene06365:intron 35.0%
ACAGAAAATGGTACCTTCAA+GGG - chr3.1:77163729-77163748 MS.gene06365:intron 35.0%
ACTCCAAAACTGATCATGTA+TGG + chr3.1:77163282-77163301 None:intergenic 35.0%
ATCAACTCACATCATGCTAA+TGG + chr3.1:77162668-77162687 None:intergenic 35.0%
ATGAAGTATACAAAGTGACG+AGG + chr3.1:77162188-77162207 None:intergenic 35.0%
CCCAGAACATCATTAAAGAA+AGG + chr3.1:77164380-77164399 None:intergenic 35.0%
CTCCAAAACTGATCATGTAT+GGG + chr3.1:77163281-77163300 None:intergenic 35.0%
CTTTAGGTCCTCTATAATAC+TGG + chr3.1:77164567-77164586 None:intergenic 35.0%
GTTATGAGTCAGGAACAATA+TGG - chr3.1:77162049-77162068 MS.gene06365:CDS 35.0%
TAATGTGTACCTGTTCGTTT+AGG + chr3.1:77161774-77161793 None:intergenic 35.0%
TATCTTTATGGCAGTGCAAT+AGG - chr3.1:77162625-77162644 MS.gene06365:intron 35.0%
TCAACTCACATCATGCTAAT+GGG + chr3.1:77162667-77162686 None:intergenic 35.0%
TCTAGATGTCTCCATTTATC+AGG - chr3.1:77163225-77163244 MS.gene06365:intron 35.0%
TGGAGATGTATATCTTGCAA+AGG - chr3.1:77164447-77164466 MS.gene06365:intron 35.0%
TTAGTATGTACAATCCAGCT+TGG - chr3.1:77164123-77164142 MS.gene06365:CDS 35.0%
TTCCAGAGTTTCATAATACG+TGG - chr3.1:77163325-77163344 MS.gene06365:intron 35.0%
! AACCCATACATGATCAGTTT+TGG - chr3.1:77163276-77163295 MS.gene06365:intron 35.0%
! AGACAGGTTGAACATATACT+TGG + chr3.1:77164199-77164218 None:intergenic 35.0%
! AGAGAACCAAGTTCTACTTT+TGG - chr3.1:77163551-77163570 MS.gene06365:intron 35.0%
! GATCTTTTCCTCCTGATAAA+TGG + chr3.1:77163239-77163258 None:intergenic 35.0%
! TATTCAGGATCAAGTTCTGA+AGG + chr3.1:77161732-77161751 None:intergenic 35.0%
! TGAATGGCTTGTAATGCTTT+AGG + chr3.1:77164583-77164602 None:intergenic 35.0%
! TTCAAACATAATTTGCAGGC+GGG - chr3.1:77162566-77162585 MS.gene06365:intron 35.0%
!! AATGATGTTCTGGGATTTCT+TGG - chr3.1:77164386-77164405 MS.gene06365:intron 35.0%
!! ATCGTTTTTATTTCGGATGG+TGG + chr3.1:77163990-77164009 None:intergenic 35.0%
!! ATTCAGGATCAAGTTCTGAA+GGG + chr3.1:77161731-77161750 None:intergenic 35.0%
!! TCCCAAAATGGAGTTCTAAA+TGG - chr3.1:77164474-77164493 MS.gene06365:intron 35.0%
!! TTGTGTTCCACTTTTGTTTG+GGG + chr3.1:77164257-77164276 None:intergenic 35.0%
!! TTGTTCTAAAGACCCACTAA+TGG + chr3.1:77162874-77162893 None:intergenic 35.0%
!!! GTGTTAACAGTCTCGTTTTT+TGG + chr3.1:77163642-77163661 None:intergenic 35.0%
!!! GTTAACAGTCTCGTTTTTTG+GGG + chr3.1:77163640-77163659 None:intergenic 35.0%
AGAAAGGAGCAGCAAAAAGA+TGG - chr3.1:77164231-77164250 MS.gene06365:intron 40.0%
AGATGTCTCCATTTATCAGG+AGG - chr3.1:77163228-77163247 MS.gene06365:intron 40.0%
AGATTGTAAGGACGAAAACC+CGG + chr3.1:77164290-77164309 None:intergenic 40.0%
CACCACGTATTATGAAACTC+TGG + chr3.1:77163330-77163349 None:intergenic 40.0%
CAGAGTTTCATAATACGTGG+TGG - chr3.1:77163328-77163347 MS.gene06365:intron 40.0%
CTAGCTGAATGTTATCGTTG+TGG - chr3.1:77162213-77162232 MS.gene06365:CDS 40.0%
CTATTCCACAAACCGTGTAT+TGG + chr3.1:77162594-77162613 None:intergenic 40.0%
CTGAAAAGGATCATCACCAA+AGG + chr3.1:77162165-77162184 None:intergenic 40.0%
GAACACAAAATTCCAATCCC+GGG - chr3.1:77164269-77164288 MS.gene06365:intron 40.0%
GGAACACAAAATTCCAATCC+CGG - chr3.1:77164268-77164287 MS.gene06365:intron 40.0%
TAGGTCCTCTATAATACTGG+CGG + chr3.1:77164564-77164583 None:intergenic 40.0%
TATTTGCTTTGTGGCTGCAT+GGG - chr3.1:77164053-77164072 MS.gene06365:CDS 40.0%
TGCAAAGGAAGATCCCAAAA+TGG - chr3.1:77164462-77164481 MS.gene06365:intron 40.0%
TGCAAGATATACATCTCCAC+TGG + chr3.1:77164446-77164465 None:intergenic 40.0%
TTAGCAATTTCCCAAACAGC+AGG - chr3.1:77163405-77163424 MS.gene06365:intron 40.0%
TTATTTGCTTTGTGGCTGCA+TGG - chr3.1:77164052-77164071 MS.gene06365:CDS 40.0%
!! GTGTCGATCTTTTGTCTTCT+TGG - chr3.1:77161920-77161939 MS.gene06365:CDS 40.0%
!! TCTTTTGGCTATTCCACAGT+TGG - chr3.1:77163375-77163394 MS.gene06365:intron 40.0%
!!! TGGGGAATTTTTCAAGCTCT+TGG - chr3.1:77163801-77163820 MS.gene06365:intron 40.0%
AACGACGATAACCTGCTGTT+TGG + chr3.1:77163419-77163438 None:intergenic 45.0%
AAGATGGCCCCAAACAAAAG+TGG - chr3.1:77164247-77164266 MS.gene06365:intron 45.0%
AAGGGACACCATCTATGGAA+TGG + chr3.1:77161713-77161732 None:intergenic 45.0%
ACAAAGTGACGAGGCTGAAA+AGG + chr3.1:77162179-77162198 None:intergenic 45.0%
ATAACAGCTGTGATTGGGTC+TGG - chr3.1:77162090-77162109 MS.gene06365:CDS 45.0%
ATACTTGGTATGCTCCCACA+AGG + chr3.1:77164184-77164203 None:intergenic 45.0%
CATTTGGAGAACAAGCACCA+GGG - chr3.1:77164084-77164103 MS.gene06365:CDS 45.0%
CTCAACCGCCAGTATTATAG+AGG - chr3.1:77164556-77164575 MS.gene06365:CDS 45.0%
GATGCAGTTCGTAGCATTCT+TGG - chr3.1:77162273-77162292 MS.gene06365:CDS 45.0%
GATTGTAAGGACGAAAACCC+GGG + chr3.1:77164289-77164308 None:intergenic 45.0%
GTCTTTGCCTTCGTAGAGAA+AGG - chr3.1:77164215-77164234 MS.gene06365:intron 45.0%
TAACAGCTGTGATTGGGTCT+GGG - chr3.1:77162091-77162110 MS.gene06365:CDS 45.0%
TAGCTTCTCTTTCCATGCAC+AGG + chr3.1:77162243-77162262 None:intergenic 45.0%
TGCTAAAAAGACGCCAACTG+TGG + chr3.1:77163391-77163410 None:intergenic 45.0%
TTCTCTACGAAGGCAAAGAC+AGG + chr3.1:77164215-77164234 None:intergenic 45.0%
! ACGACGATAACCTGCTGTTT+GGG + chr3.1:77163418-77163437 None:intergenic 45.0%
! TTCTGAAGGGACACCATCTA+TGG + chr3.1:77161718-77161737 None:intergenic 45.0%
! TTCTTGGAGCAGTGGGATTT+TGG - chr3.1:77164402-77164421 MS.gene06365:intron 45.0%
!!! CAGTCTCGTTTTTTGGGGAA+AGG + chr3.1:77163635-77163654 None:intergenic 45.0%
!! AAAAAAAAAAAAATTAATTC+GGG - chr3.1:77163672-77163691 MS.gene06365:CDS 5.0%
AACAGCTGTGATTGGGTCTG+GGG - chr3.1:77162092-77162111 MS.gene06365:CDS 50.0%
AACCGGAGCCATTCCATAGA+TGG - chr3.1:77161702-77161721 MS.gene06365:CDS 50.0%
AATCCAGTGAGCAAGTTCCC+TGG + chr3.1:77164104-77164123 None:intergenic 50.0%
ACGGTAACTCGAACGAACTC+AGG - chr3.1:77163601-77163620 MS.gene06365:intron 50.0%
CACCATCTATGGAATGGCTC+CGG + chr3.1:77161707-77161726 None:intergenic 50.0%
CCTGAATACTTCGACGACGA+TGG - chr3.1:77161744-77161763 MS.gene06365:CDS 50.0%
CTGGGATTTCTTGGAGCAGT+GGG - chr3.1:77164395-77164414 MS.gene06365:intron 50.0%
GATGGTCGTCCTAAACGAAC+AGG - chr3.1:77161762-77161781 MS.gene06365:CDS 50.0%
GCATTTGGAGAACAAGCACC+AGG - chr3.1:77164083-77164102 MS.gene06365:CDS 50.0%
GGGTTGCTTGACATGTGACA+TGG + chr3.1:77163261-77163280 None:intergenic 50.0%
GTATCAGTTGTGGCTGCTCT+TGG - chr3.1:77164533-77164552 MS.gene06365:CDS 50.0%
TAAGGACGAAAACCCGGGAT+TGG + chr3.1:77164284-77164303 None:intergenic 50.0%
TGCTGCTCCTTTCTCTACGA+AGG + chr3.1:77164225-77164244 None:intergenic 50.0%
! CCATCGTCGTCGAAGTATTC+AGG + chr3.1:77161747-77161766 None:intergenic 50.0%
! GCTATCCTTAGCATGGGCTA+CGG - chr3.1:77162116-77162135 MS.gene06365:CDS 50.0%
! TCCAGCTTGGCTCATCGATT+TGG - chr3.1:77164136-77164155 MS.gene06365:CDS 50.0%
! TCTGGGATTTCTTGGAGCAG+TGG - chr3.1:77164394-77164413 MS.gene06365:intron 50.0%
! TGCATGGGCTATGCTGCATT+TGG - chr3.1:77164068-77164087 MS.gene06365:CDS 50.0%
! TGGGGTGCTATCCTTAGCAT+GGG - chr3.1:77162110-77162129 MS.gene06365:CDS 50.0%
!! ACCTTCAAGGGTACTCTCAC+TGG - chr3.1:77163741-77163760 MS.gene06365:intron 50.0%
!! ACGGCACAATTGGGTTGGAT+TGG - chr3.1:77162135-77162154 MS.gene06365:CDS 50.0%
!! GCACAATTGGGTTGGATTGG+TGG - chr3.1:77162138-77162157 MS.gene06365:CDS 50.0%
!! TCCAGTGAGAGTACCCTTGA+AGG + chr3.1:77163745-77163764 None:intergenic 50.0%
!! TCCCACAAGGTGGATTACGA+CGG + chr3.1:77164171-77164190 None:intergenic 50.0%
!! TTCAAGGGTACTCTCACTGG+AGG - chr3.1:77163744-77163763 MS.gene06365:intron 50.0%
CGTTGTGGAGATCCTGTGCA+TGG - chr3.1:77162228-77162247 MS.gene06365:CDS 55.0%
CTTGGTATGCTCCCACAAGG+TGG + chr3.1:77164181-77164200 None:intergenic 55.0%
GCCAAATCGATGAGCCAAGC+TGG + chr3.1:77164140-77164159 None:intergenic 55.0%
GCCGTCGTAATCCACCTTGT+GGG - chr3.1:77164167-77164186 MS.gene06365:CDS 55.0%
TGCCGTCGTAATCCACCTTG+TGG - chr3.1:77164166-77164185 MS.gene06365:CDS 55.0%
TTGTGCCGTAGCCCATGCTA+AGG + chr3.1:77162124-77162143 None:intergenic 55.0%
! AGCATGGGCTACGGCACAAT+TGG - chr3.1:77162125-77162144 MS.gene06365:CDS 55.0%
! CTGGGGTGCTATCCTTAGCA+TGG - chr3.1:77162109-77162128 MS.gene06365:CDS 55.0%
! GCATGGGCTACGGCACAATT+GGG - chr3.1:77162126-77162145 MS.gene06365:CDS 55.0%
!! GGGTTGGATTGGTGGTCCTT+TGG - chr3.1:77162146-77162165 MS.gene06365:CDS 55.0%
GGGCGCCAATACACGGTTTG+TGG - chr3.1:77162586-77162605 MS.gene06365:intron 60.0%
GGGCTACGGCACAATTGGGT+TGG - chr3.1:77162130-77162149 MS.gene06365:CDS 60.0%
! GCACCAGGGAACTTGCTCAC+TGG - chr3.1:77164098-77164117 MS.gene06365:CDS 60.0%
TGCAGGCGGGCGCCAATACA+CGG - chr3.1:77162579-77162598 MS.gene06365:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 77161678 77164616 77161678 ID=MS.gene06365
chr3.1 mRNA 77161678 77164616 77161678 ID=MS.gene06365.t1;Parent=MS.gene06365
chr3.1 exon 77164511 77164616 77164511 ID=MS.gene06365.t1.exon1;Parent=MS.gene06365.t1
chr3.1 CDS 77164511 77164616 77164511 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
chr3.1 exon 77164000 77164233 77164000 ID=MS.gene06365.t1.exon2;Parent=MS.gene06365.t1
chr3.1 CDS 77164000 77164233 77164000 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
chr3.1 exon 77163617 77163710 77163617 ID=MS.gene06365.t1.exon3;Parent=MS.gene06365.t1
chr3.1 CDS 77163617 77163710 77163617 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
chr3.1 exon 77162868 77163082 77162868 ID=MS.gene06365.t1.exon4;Parent=MS.gene06365.t1
chr3.1 CDS 77162868 77163082 77162868 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
chr3.1 exon 77162422 77162561 77162422 ID=MS.gene06365.t1.exon5;Parent=MS.gene06365.t1
chr3.1 CDS 77162422 77162561 77162422 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
chr3.1 exon 77161678 77162322 77161678 ID=MS.gene06365.t1.exon6;Parent=MS.gene06365.t1
chr3.1 CDS 77161678 77162322 77161678 ID=cds.MS.gene06365.t1;Parent=MS.gene06365.t1
Gene Sequence

>MS.gene06365

ATGTTGAAAGAAGAAATAGAAAGAAACCGGAGCCATTCCATAGATGGTGTCCCTTCAGAACTTGATCCTGAATACTTCGACGACGATGGTCGTCCTAAACGAACAGGTACACATTAATTCATTTCATTATATAATTTTACGTTAAATGGTATTTTTTGATTGCATATTTGATGATATGTAAATGAGTTTGTATGTAATGACGCACAAATGAGTTTAATGTGAATTTCACAAGTTTACATTTGGTGTCGATCTTTTGTCTTCTTGGATAATGTAACAAATATCAAATAGAGATGAATTTCAATTTTTTTATGTCTAATTTTTATGGGAAAATTATCCCTCCTAGTAATGAAAATTTAACACATTTTTTTTTTGTTATGAGTCAGGAACAATATGGACAACAAGTTCTCATATAATAACAGCTGTGATTGGGTCTGGGGTGCTATCCTTAGCATGGGCTACGGCACAATTGGGTTGGATTGGTGGTCCTTTGGTGATGATCCTTTTCAGCCTCGTCACTTTGTATACTTCATCAATGCTAGCTGAATGTTATCGTTGTGGAGATCCTGTGCATGGAAAGAGAAGCTATACTTTTGTGGATGCAGTTCGTAGCATTCTTGGTAACTTATATTGACTTACACGTTAATCAACACATACTTTCCCATGCTCTTAAATACAAGCAAAAAGTCAAGTGTATTTGTTTCAAATGTAGAACAAAATGTGTTTGTATTTAAGATCGGAATGAGTATTATTAAACATCAATATCATGTCACAACATGCATGCAAAGCATGTATATTATTTTTTGGTGAAAATGCAATGCATGTATCTAAAAGAGTGTTGTTGATGTAATATTCTTAAGAGTTGGTCACATTCTATAATAACATTATAGTTTCAAACATAATTTGCAGGCGGGCGCCAATACACGGTTTGTGGAATAGTTCAGTACTTGTATCTTTATGGCAGTGCAATAGGATACTCGATTGCAGCTCCCATTAGCATGATGTGAGTTGATTAACCATACCGTAATTATCTTTTACAAGCATTACTCGTTGTATTTTGTTTGAGTAAAAAAAAAAAAGAGTTTATAGAATGTAAAATGAACGATTAAAGAGAGATTTTTTTTATTTTTTTTTATCAAAAAACAAGAGAGAATATTTAAGATTTTTTTTTTGAGTTAAATAAGATATATTAATTACCATTAGTGGGTCTTTAGAACAACTGAACAATCTTGTTAGAAAAATAATTGATTAATCAATTAATTTGTGAAAAATTTAATATTATTATGAAAATTTGAGAAATTTAAACAAATAAAAAGACATTGAAGAACATAAGTATAACCTAAAAAGAAGGATTGATATTGTTAAAAAAAAAAAAAAAAAAAAACCATTGATGGATCAAAAATATGTCTAGTTGAAATTAGATCAATCAAAAGTAAAATTAAGCCAAAATACCTATTAGCATTTGTCTTACTTCTATTATTGATAGGGTTAGCTAACTAGATTATTGTTGATGAGTTTATTTTAATTTGGGTGACAGGGAAATAAACAAGTCTAGATGTCTCCATTTATCAGGAGGAAAAGATCCATGTCACATGTCAAGCAACCCATACATGATCAGTTTTGGAGTAATCGAAATTTTCGTTTCTCAAATTCCAGAGTTTCATAATACGTGGTGGCTCTCAGTAATAGCTGCAATAATGTCTTTTGGCTATTCCACAGTTGGCGTCTTTTTAGCAATTTCCCAAACAGCAGGTTATCGTCGTTTTATTTTATAGAAACTAAAGATGAAACATTCGTATTTTTATAAAGACTTCAGATATATTGAACATTTAATCAAACAATTGTACTCAAGTGGTTATTGAAATTCACCAAATTTAGAGAACCAAGTTCTACTTTTGGATGTAATAATTCTTGATCATGTACTTTACGGTAACTCGAACGAACTCAGGACTATAGTCCTTTCCCCAAAAAACGAGACTGTTAACACAAAAAAAAAAAAAAAAAAAAAAATTAATTCGGGGATTATACTTTTTGTTTTGCTAACTGATTTTTAAACAGAAAATGGTACCTTCAAGGGTACTCTCACTGGAGGAAGCACTGAAGATGTGTCAACAACAACAAAATTGTGGGGAATTTTTCAAGCTCTTGGTGACATAGCCTTTGCTTATTCATACTCTCAAATTCTCATTGAAATTCAGGTATATATAATTATATGCCCTTTCTTTATCTTAATTAAAATTAAGAAAAACAACAGAATTTTGTGACAGAAACTAAATATATATTTTTACTACACACAGGACACTATAAAAAGTCCACCATCCGAAATAAAAACGATGAAGAATGCAGCAGCTTTAAGTGTTGCTGTCACTACAGCATTTTATTTGCTTTGTGGCTGCATGGGCTATGCTGCATTTGGAGAACAAGCACCAGGGAACTTGCTCACTGGATTTAGTATGTACAATCCAGCTTGGCTCATCGATTTGGCGAATGCTGCCGTCGTAATCCACCTTGTGGGAGCATACCAAGTATATGTTCAACCTGTCTTTGCCTTCGTAGAGAAAGGAGCAGCAAAAAGATGGCCCCAAACAAAAGTGGAACACAAAATTCCAATCCCGGGTTTTCGTCCTTACAATCTAAATCTATTTAGATTAGTTTGGAGAACAGTATTTATGATCCTAACTACTTTTGTTGCAATGTTGATTCCTTTCTTTAATGATGTTCTGGGATTTCTTGGAGCAGTGGGATTTTGGCCTTTAACAGTTTATTATCCAGTGGAGATGTATATCTTGCAAAGGAAGATCCCAAAATGGAGTTCTAAATGGATTTTGTTGGAAATCATAAGTGTTATATGCTTTATTGTATCAGTTGTGGCTGCTCTTGGCTCAACCGCCAGTATTATAGAGGACCTAAAGCATTACAAGCCATTCAGCTCAGAGTATTGA
Protein sequence

>MS.gene06365.t1

MLKEEIERNRSHSIDGVPSELDPEYFDDDGRPKRTGTIWTTSSHIITAVIGSGVLSLAWATAQLGWIGGPLVMILFSLVTLYTSSMLAECYRCGDPVHGKRSYTFVDAVRSILGGRQYTVCGIVQYLYLYGSAIGYSIAAPISMMEINKSRCLHLSGGKDPCHMSSNPYMISFGVIEIFVSQIPEFHNTWWLSVIAAIMSFGYSTVGVFLAISQTAENGTFKGTLTGGSTEDVSTTTKLWGIFQALGDIAFAYSYSQILIEIQDTIKSPPSEIKTMKNAAALSVAVTTAFYLLCGCMGYAAFGEQAPGNLLTGFSMYNPAWLIDLANAAVVIHLVGAYQVYVQPVFAFVEKGAAKRWPQTKVEHKIPIPGFRPYNLNLFRLVWRTVFMILTTFVAMLIPFFNDVLGFLGAVGFWPLTVYYPVEMYILQRKIPKWSSKWILLEIISVICFIVSVVAALGSTASIIEDLKHYKPFSSEY