AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06366


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06366.t1 MTR_3g096790 89.812 746 48 3 1 741 1 723 0.0 1065
MS.gene06366.t1 MTR_3g096790 92.434 608 42 1 138 741 53 660 0.0 878
MS.gene06366.t1 MTR_8g494210 75.654 382 76 4 366 741 531 901 1.99e-108 352
MS.gene06366.t1 MTR_8g494210 54.673 428 128 14 1 367 1 423 1.76e-92 309
MS.gene06366.t1 MTR_8g494210 53.071 407 125 14 1 346 1 402 8.53e-92 303
MS.gene06366.t1 MTR_8g494210 65.272 239 66 4 366 598 531 758 2.31e-14 77.4
MS.gene06366.t1 MTR_8g077150 48.058 412 145 12 362 741 1054 1428 1.96e-77 273
MS.gene06366.t1 MTR_8g077150 47.816 412 148 12 362 741 1054 1430 3.71e-76 269
MS.gene06366.t1 MTR_3g088495 60.000 235 88 3 511 741 277 509 1.50e-74 251
MS.gene06366.t1 MTR_1g022415 43.333 360 135 6 388 741 1061 1357 9.92e-65 234
MS.gene06366.t1 MTR_3g088495 53.714 175 75 3 511 681 277 449 1.59e-37 147
MS.gene06366.t1 MTR_3g088495 53.714 175 75 3 511 681 277 449 1.96e-37 147
MS.gene06366.t1 MTR_8g094000 58.865 141 49 2 95 232 67 201 4.54e-36 135
MS.gene06366.t1 MTR_3g111700 56.383 94 41 0 648 741 584 677 1.29e-31 132
MS.gene06366.t1 MTR_3g111700 56.383 94 41 0 648 741 588 681 1.35e-31 132
MS.gene06366.t1 MTR_2g049770 56.977 86 37 0 656 741 357 442 3.06e-27 116
MS.gene06366.t1 MTR_8g079472 52.326 86 41 0 656 741 365 450 5.28e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06366.t1 AT4G12780 56.977 344 133 6 412 741 523 865 8.79e-84 285
MS.gene06366.t1 AT4G12780 28.637 433 149 17 1 356 1 350 2.92e-17 87.0
MS.gene06366.t1 AT4G12780 56.977 344 133 6 412 741 550 892 9.17e-84 285
MS.gene06366.t1 AT4G12780 31.409 433 164 18 1 356 1 377 2.08e-26 116
MS.gene06366.t1 AT4G12770 54.627 335 102 7 452 741 548 877 5.32e-83 283
MS.gene06366.t1 AT4G12770 31.935 429 165 12 1 356 1 375 2.34e-34 141
MS.gene06366.t1 AT4G12770 54.167 336 104 7 452 741 548 879 5.47e-82 280
MS.gene06366.t1 AT4G12770 31.935 429 165 12 1 356 1 375 2.05e-34 141
MS.gene06366.t1 AT4G12780 54.848 361 131 8 412 741 523 882 4.78e-80 275
MS.gene06366.t1 AT4G12780 28.637 433 149 17 1 356 1 350 3.71e-17 86.7
MS.gene06366.t1 AT1G21660 53.814 236 102 4 506 741 283 511 8.09e-72 244
MS.gene06366.t1 AT4G36520 49.495 297 83 7 456 741 1171 1411 1.88e-64 234
MS.gene06366.t1 AT1G75310 40.957 376 161 8 368 741 1124 1440 2.87e-56 209
MS.gene06366.t1 AT1G75310 45.118 297 133 6 449 741 1167 1437 1.76e-52 198
MS.gene06366.t1 AT4G12780 57.255 255 92 7 412 651 550 802 1.96e-29 125
MS.gene06366.t1 AT4G12780 31.409 433 164 18 1 356 1 377 6.43e-26 114
MS.gene06366.t1 AT4G12780 57.255 255 92 7 412 651 523 775 2.12e-29 125
MS.gene06366.t1 AT4G12780 29.167 432 148 17 1 356 1 350 9.77e-17 85.1
MS.gene06366.t1 AT4G12780 57.255 255 92 7 412 651 523 775 2.12e-29 125
MS.gene06366.t1 AT4G12780 29.167 432 148 17 1 356 1 350 9.77e-17 85.1
MS.gene06366.t1 AT1G75100 46.729 107 57 0 635 741 533 639 1.34e-27 119
MS.gene06366.t1 AT1G30280 46.591 88 45 2 662 747 361 448 8.98e-20 93.6
MS.gene06366.t1 AT1G30280 46.512 86 45 1 662 746 361 446 1.26e-19 92.8

Find 196 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACACAGTTGGAGGTTTC+TGG 0.172178 3.1:-77156930 None:intergenic
TCCCTCAGCTGGAGAATTTC+AGG 0.198356 3.1:+77157128 MS.gene06366:CDS
CCCTTCTGCTGCACTTTATC+AGG 0.215143 3.1:-77158747 None:intergenic
TACAGCCGCTACTGTTAAAA+AGG 0.236113 3.1:+77158695 MS.gene06366:CDS
CAGCAGCTGCAGCTCTTTCT+CGG 0.239034 3.1:-77156192 None:intergenic
TTGTTATGTGTTCGTCTATC+AGG 0.263486 3.1:-77155428 None:intergenic
GAAAGATCATCAACAATATT+AGG 0.291136 3.1:-77156979 None:intergenic
AATTTACTAATCTCTTCTAA+TGG 0.298569 3.1:-77155188 None:intergenic
CAGCAGCCTTCTCAGCTCTT+TGG 0.302766 3.1:-77155940 None:intergenic
GATGATTTGATCAATGGATT+TGG 0.304715 3.1:+77153343 MS.gene06366:CDS
TGAATGATGATCAGGTATTA+TGG 0.312370 3.1:+77158631 MS.gene06366:intron
CCTCAGATCATGACGATATA+TGG 0.313995 3.1:+77155630 MS.gene06366:CDS
CCTCAGCAGCAGCCCTTTCA+CGG 0.316110 3.1:-77156033 None:intergenic
AGCAGCTGCAGCTCTTTCTC+GGG 0.328646 3.1:-77156191 None:intergenic
TTAGAATCAGATGAATATTT+AGG 0.329043 3.1:-77155500 None:intergenic
TTCAATTGATTCTTTATCTC+TGG 0.335760 3.1:-77155387 None:intergenic
CACAGGCCCACTCCTGATAT+TGG 0.347676 3.1:+77155044 MS.gene06366:intron
CGTTTATTAGCTACTGAATT+CGG 0.353480 3.1:+77153001 MS.gene06366:CDS
ATTTACTAATCTCTTCTAAT+GGG 0.371043 3.1:-77155187 None:intergenic
TTGTGTTTGACCACGGTGTT+GGG 0.371244 3.1:-77155352 None:intergenic
ATGATTTGATCAATGGATTT+GGG 0.374205 3.1:+77153344 MS.gene06366:CDS
GCAGAAATATATTGCAGAAA+AGG 0.382951 3.1:+77158782 MS.gene06366:CDS
GGTGAAATTGGAAGATCCTT+TGG 0.383015 3.1:-77153068 None:intergenic
AGGAGGCCTTGGAGCGCTAT+TGG 0.387575 3.1:-77156278 None:intergenic
GATGATCTTCTCGGCGGATT+CGG 0.391097 3.1:+77153274 MS.gene06366:CDS
TAAAGAGGTTTATCATAAAC+AGG 0.396140 3.1:-77153220 None:intergenic
TCTGATGATGAACCAATATC+AGG 0.396642 3.1:-77155056 None:intergenic
CTCAGCAGCAGCCCTTTCAC+GGG 0.403036 3.1:-77156032 None:intergenic
AACTCCTGATCATGTTCAAC+AGG 0.404831 3.1:-77155455 None:intergenic
GAAGTTAAGCGCTGGGCTGC+AGG 0.405772 3.1:+77158027 MS.gene06366:CDS
GAGTTAGACCTAGGAGGCCT+TGG 0.407343 3.1:-77156289 None:intergenic
GAAGTTGAGAGAGGAAGTTT+TGG 0.413068 3.1:-77153089 None:intergenic
CGCTGGGCTGCAGGGAAAGA+GGG 0.414763 3.1:+77158036 MS.gene06366:CDS
GGAGGTTTCTGGTTTACCTC+TGG 0.418586 3.1:-77156919 None:intergenic
CCTCTGAAGGCGTTCCAATC+TGG 0.418587 3.1:-77157184 None:intergenic
CTGCTTCTCTCCTCTGACTT+GGG 0.419390 3.1:-77155740 None:intergenic
AGGGTCTTCTGTTGCATTGG+AGG 0.419847 3.1:-77155105 None:intergenic
CGAGGAGGAGGTGGTCTTGA+AGG 0.420028 3.1:-77155704 None:intergenic
ACTGCCTGCCAACCACATTC+AGG 0.420484 3.1:-77158654 None:intergenic
AGCTAGAGTGCGTGCTGAAA+GGG 0.423395 3.1:+77155982 MS.gene06366:CDS
GTTGCGTTTGATGATCTTCT+CGG 0.423406 3.1:+77153265 MS.gene06366:CDS
GCGCTGGGCTGCAGGGAAAG+AGG 0.430219 3.1:+77158035 MS.gene06366:CDS
CTCAGTAACCACACCTTTGA+CGG 0.433699 3.1:-77153378 None:intergenic
GATAGTTCATCAAATTCTAA+TGG 0.437018 3.1:+77155236 MS.gene06366:CDS
ACTGCTTCTCTCCTCTGACT+TGG 0.437860 3.1:-77155741 None:intergenic
CCGTCATCGTCGTCGTAAAG+AGG 0.439814 3.1:-77153235 None:intergenic
TGACCACGGTGTTGGGGAAT+CGG 0.440553 3.1:-77155345 None:intergenic
CTGAAAGGGCCGCTGTTCAG+AGG 0.442095 3.1:+77155996 MS.gene06366:CDS
CTGCTGCTGAGGCAAAGAAA+AGG 0.445504 3.1:+77156044 MS.gene06366:CDS
AAGAAGGGGAAGTAGGCATT+TGG 0.450918 3.1:-77155538 None:intergenic
AGGGCTGAAAAGGCTGCTGC+AGG 0.454335 3.1:+77156064 MS.gene06366:CDS
AAACCATCATTAAAATAAGA+AGG 0.455056 3.1:-77155554 None:intergenic
AAGAATTGAAAGGGAAAGGA+AGG 0.455730 3.1:+77155811 MS.gene06366:CDS
GATTCCTGTTGAACATGATC+AGG 0.457157 3.1:+77155451 MS.gene06366:CDS
TGTGGAAAGGGCTGCTGCAG+AGG 0.458750 3.1:+77156168 MS.gene06366:CDS
CGTTCTTCAGCGTGAGGGGA+CGG 0.458812 3.1:+77156254 MS.gene06366:CDS
GTAGGCATTTGGCCAGCTAC+TGG 0.464119 3.1:-77155527 None:intergenic
TCAGAGAGGACTAGCAGATA+TGG 0.464943 3.1:+77155320 MS.gene06366:CDS
AAAAGGGTCTTCTGTTGCAT+TGG 0.465313 3.1:-77155108 None:intergenic
GAAGAGATCGGAATCATGAT+TGG 0.465418 3.1:-77153140 None:intergenic
AAAGGCTGCTGCAGGGGAAA+AGG 0.465673 3.1:+77156072 MS.gene06366:CDS
ACCGGAGGTGCTACGAGAGA+TGG 0.465933 3.1:-77153173 None:intergenic
TTTGGCCACAAATTCTTATG+TGG 0.466052 3.1:-77158930 None:intergenic
GAGAGCAAAGAAGAATTGAA+AGG 0.467658 3.1:+77155801 MS.gene06366:CDS
ATAGCGCTCCAAGGCCTCCT+AGG 0.469434 3.1:+77156281 MS.gene06366:CDS
CACAAGCTGAAGCCCGTGAA+AGG 0.469852 3.1:+77156020 MS.gene06366:CDS
GGCAAAGAAAAGGGCTGAAA+AGG 0.470382 3.1:+77156054 MS.gene06366:CDS
CCGTGAAAGGGCTGCTGCTG+AGG 0.470897 3.1:+77156033 MS.gene06366:CDS
ATCATAAACAGGCGAGTTGA+CGG 0.471295 3.1:-77153209 None:intergenic
CCGTGGTCAAACACAAGTTC+AGG 0.471860 3.1:+77155359 MS.gene06366:CDS
GGAGAATTTCAGGAGGTTGA+AGG 0.473553 3.1:+77157138 MS.gene06366:CDS
TCCAAAATATGAAGAAAAGT+TGG 0.477629 3.1:+77155607 MS.gene06366:CDS
GCTCCAACTGATTCATCCTC+AGG 0.479394 3.1:+77155152 MS.gene06366:CDS
ATATGTACTGGTCGAGGAGG+AGG 0.482183 3.1:-77155716 None:intergenic
GGAAAGAGAAAATGAAAGAC+AGG 0.482527 3.1:+77155865 MS.gene06366:CDS
TTAAAATAAGAAGGGGAAGT+AGG 0.484614 3.1:-77155545 None:intergenic
AAGCTAGAGTGCGTGCTGAA+AGG 0.485213 3.1:+77155981 MS.gene06366:CDS
AGAGCAAAGAAGAATTGAAA+GGG 0.486134 3.1:+77155802 MS.gene06366:CDS
CCCATCTCTCGTAGCACCTC+CGG 0.486573 3.1:+77153172 MS.gene06366:CDS
AGAAAGGCGAAAAGCCAGAT+TGG 0.487061 3.1:+77157170 MS.gene06366:CDS
CTTGTGTTTGACCACGGTGT+TGG 0.489404 3.1:-77155353 None:intergenic
AAAGAAGAATTGAAAGGGAA+AGG 0.494666 3.1:+77155807 MS.gene06366:CDS
GTTCTTCAGCGTGAGGGGAC+GGG 0.495306 3.1:+77156255 MS.gene06366:CDS
GAGAACAACAGAGACTTGAG+AGG 0.495826 3.1:+77155843 MS.gene06366:CDS
CTTAGTACATACATATTGTA+AGG 0.496733 3.1:-77158082 None:intergenic
GACGGACATGGAATCGAAAC+CGG 0.497502 3.1:-77153191 None:intergenic
CGCGCTCCTGAGCCCTCTGA+AGG 0.498449 3.1:-77157197 None:intergenic
AGAAAATGAAAGACAGGCTG+TGG 0.501628 3.1:+77155871 MS.gene06366:CDS
ATTGGAAGAGTGAAAGGATC+GGG 0.502219 3.1:-77153122 None:intergenic
GGGATTAGAATTGAAGAGAT+CGG 0.502447 3.1:-77153152 None:intergenic
GAGAATTTCAGGAGGTTGAA+GGG 0.504840 3.1:+77157139 MS.gene06366:CDS
CATATCTGCCCGAGAATTGA+CGG 0.506680 3.1:-77155582 None:intergenic
GAGTTTCATCAAGTGCCATA+TGG 0.509261 3.1:+77155473 MS.gene06366:CDS
AAACCATGAGCAGCAGCAAA+AGG 0.509397 3.1:+77155766 MS.gene06366:CDS
AACCATCATTAAAATAAGAA+GGG 0.510911 3.1:-77155553 None:intergenic
TTTGAAGCATCTCCCTCAGC+TGG 0.511972 3.1:+77157117 MS.gene06366:intron
TGCTGCTGAGGCAAAGAAAA+GGG 0.513805 3.1:+77156045 MS.gene06366:CDS
TCAACAATATTAGGTGATGA+TGG 0.515248 3.1:-77156970 None:intergenic
CCGGAGGTGCTACGAGAGAT+GGG 0.515653 3.1:-77153172 None:intergenic
TTTATGTTTGAAGACACAGT+TGG 0.520718 3.1:-77156940 None:intergenic
ACAAGCTGAAGCCCGTGAAA+GGG 0.521348 3.1:+77156021 MS.gene06366:CDS
TGGACTTTGAAGTTAAGCGC+TGG 0.522927 3.1:+77158019 MS.gene06366:CDS
CTGTGTCTTCAAACATAAAG+AGG 0.524678 3.1:+77156944 MS.gene06366:CDS
TCTGCTCTCTTTGAGTCTGT+AGG 0.527874 3.1:-77157664 None:intergenic
TCTGACTTGGGAATATGTAC+TGG 0.528885 3.1:-77155728 None:intergenic
GAATATTTAGGCATGCCATA+TGG 0.529615 3.1:-77155488 None:intergenic
GGACTTTGAAGTTAAGCGCT+GGG 0.530794 3.1:+77158020 MS.gene06366:CDS
CTTCTAATGGGTCTGAAAAG+TGG 0.534760 3.1:-77155175 None:intergenic
TTTATACTAGGCAAAGGCAT+TGG 0.535677 3.1:+77157622 MS.gene06366:intron
TCAGAGGCTTGCGGAAACAC+TGG 0.536353 3.1:+77157999 MS.gene06366:intron
CAGAACGTGCTGCTGTGGAA+AGG 0.537152 3.1:+77156155 MS.gene06366:CDS
GAATCGTTCTTCAGCGTGAG+GGG 0.539328 3.1:+77156250 MS.gene06366:CDS
GAATTTCCAAGTCCATCAAA+AGG 0.540071 3.1:-77155281 None:intergenic
GGCTGAAAAGGCTGCTGCAG+GGG 0.540322 3.1:+77156066 MS.gene06366:CDS
ATCATGATTGGAAGAGTGAA+AGG 0.543443 3.1:-77153128 None:intergenic
ATGGCCTGAATGTGGTTGGC+AGG 0.545019 3.1:+77158650 MS.gene06366:CDS
TTGAAGGGGAAAGTGAAGAA+AGG 0.545134 3.1:+77157154 MS.gene06366:CDS
AGAACGTGCTGCTGTGGAAA+GGG 0.545428 3.1:+77156156 MS.gene06366:CDS
ATTGGCTGAGAAGAATCAAC+GGG 0.546286 3.1:+77157640 MS.gene06366:CDS
GGAACGCCTTCAGAGGGCTC+AGG 0.554110 3.1:+77157191 MS.gene06366:CDS
AGGCCACTGTTATCTACATG+TGG 0.555363 3.1:+77158903 MS.gene06366:intron
ATGTTTGAAGACACAGTTGG+AGG 0.555500 3.1:-77156937 None:intergenic
GATTCTAATAAACCAGTAGC+TGG 0.557003 3.1:+77155515 MS.gene06366:CDS
AGCTCGCCAAAGAGCTGAGA+AGG 0.557004 3.1:+77155934 MS.gene06366:CDS
GAAGGTGGTGGAGCAGAAGT+TGG 0.558690 3.1:-77155686 None:intergenic
AAGTTAAGCGCTGGGCTGCA+GGG 0.559252 3.1:+77158028 MS.gene06366:CDS
GGGCTGAAAAGGCTGCTGCA+GGG 0.559351 3.1:+77156065 MS.gene06366:CDS
TCCTGATAAAGTGCAGCAGA+AGG 0.559973 3.1:+77158746 MS.gene06366:CDS
GGAACAAGTCCTCCCGTCAA+AGG 0.560199 3.1:+77153365 MS.gene06366:CDS
ATTCGGTCATTCGAAGAAAA+CGG 0.561173 3.1:+77153291 MS.gene06366:CDS
TGTACTGGTCGAGGAGGAGG+TGG 0.561547 3.1:-77155713 None:intergenic
TCAGTAACCACACCTTTGAC+GGG 0.564015 3.1:-77153377 None:intergenic
TCCTGAAATTCTCCAGCTGA+GGG 0.565222 3.1:-77157129 None:intergenic
CCTCTTTACGACGACGATGA+CGG 0.565572 3.1:+77153235 MS.gene06366:CDS
TAAAGCAGAACGTGCTGCTG+TGG 0.566166 3.1:+77156150 MS.gene06366:CDS
TGGCCTGAGGATGAATCAGT+TGG 0.568887 3.1:-77155155 None:intergenic
TGAGCAGCAGCAAAAGGAGA+TGG 0.568955 3.1:+77155772 MS.gene06366:CDS
TGAAAGGGCCGCTGTTCAGA+GGG 0.569740 3.1:+77155997 MS.gene06366:CDS
ATGTGAATCGAAGTTGAGAG+AGG 0.572513 3.1:-77153098 None:intergenic
CTCCTGAAATTCTCCAGCTG+AGG 0.572662 3.1:-77157130 None:intergenic
AACAGGCGAGTTGACGGACA+TGG 0.572944 3.1:-77153203 None:intergenic
TGAATCGTTCTTCAGCGTGA+GGG 0.573586 3.1:+77156249 MS.gene06366:CDS
GCTGGGCTGCAGGGAAAGAG+GGG 0.574702 3.1:+77158037 MS.gene06366:CDS
CCAGATTGGAACGCCTTCAG+AGG 0.574933 3.1:+77157184 MS.gene06366:CDS
ATATCTGCCCGAGAATTGAC+GGG 0.576043 3.1:-77155581 None:intergenic
GTCCTCTCTGATGAAAATGC+TGG 0.577003 3.1:-77155308 None:intergenic
GATTGGAAGAGTGAAAGGAT+CGG 0.577344 3.1:-77153123 None:intergenic
GAGAAAGAGCTGCAGCTGCA+AGG 0.578548 3.1:+77156107 MS.gene06366:CDS
GGAGGTGGTCTTGAAGGTGG+TGG 0.579037 3.1:-77155698 None:intergenic
GTGAAGAATGAGAGAGGTGT+CGG 0.580582 3.1:+77153313 MS.gene06366:CDS
GGAGGAGGTGGTCTTGAAGG+TGG 0.581949 3.1:-77155701 None:intergenic
TGATGCACAATTTCAGCCAG+AGG 0.589144 3.1:+77156903 MS.gene06366:CDS
CCATATATCGTCATGATCTG+AGG 0.593418 3.1:-77155630 None:intergenic
TTGAATCGTTCTTCAGCGTG+AGG 0.593892 3.1:+77156248 MS.gene06366:CDS
GACGGGCCAATAGCGCTCCA+AGG 0.596506 3.1:+77156272 MS.gene06366:CDS
ACCATCATTAAAATAAGAAG+GGG 0.596875 3.1:-77155552 None:intergenic
TTGGGAATATGTACTGGTCG+AGG 0.596893 3.1:-77155722 None:intergenic
GGCCACTGTTATCTACATGT+GGG 0.602583 3.1:+77158904 MS.gene06366:intron
AAAACGGTGAAGAATGAGAG+AGG 0.603787 3.1:+77153307 MS.gene06366:CDS
CAGATTGGAACGCCTTCAGA+GGG 0.608050 3.1:+77157185 MS.gene06366:CDS
ATTGGTGCAGATTTGCCTTG+AGG 0.610923 3.1:-77153031 None:intergenic
AGAATTTCAGGAGGTTGAAG+GGG 0.612114 3.1:+77157140 MS.gene06366:CDS
AATATATTTCTGCTGAAGAG+TGG 0.620107 3.1:-77158772 None:intergenic
CATTGGCTGAGAAGAATCAA+CGG 0.622100 3.1:+77157639 MS.gene06366:CDS
GATGAACCAATATCAGGAGT+GGG 0.623236 3.1:-77155050 None:intergenic
TTGGATGATGATGATGACAT+TGG 0.623868 3.1:-77153049 None:intergenic
TCATGACGATATATGGCTAA+CGG 0.623870 3.1:+77155637 MS.gene06366:CDS
CCTGATAAAGTGCAGCAGAA+GGG 0.624350 3.1:+77158747 MS.gene06366:CDS
GAATTCGGTTTGAAACCTCA+AGG 0.625188 3.1:+77153016 MS.gene06366:CDS
TCAGAGGGCTCAGGAGCGCG+CGG 0.626791 3.1:+77157200 MS.gene06366:CDS
TGATGAACCAATATCAGGAG+TGG 0.633810 3.1:-77155051 None:intergenic
CTCACAGAAGAGTTAGACCT+AGG 0.635511 3.1:-77156298 None:intergenic
CTCAGCTGGAGAATTTCAGG+AGG 0.637505 3.1:+77157131 MS.gene06366:CDS
TGAGGATGAATCAGTTGGAG+CGG 0.639821 3.1:-77155150 None:intergenic
ATGTCATCATCATCATCCAA+AGG 0.640651 3.1:+77153052 MS.gene06366:CDS
GGTCAAACACAAGTTCAGGT+TGG 0.644850 3.1:+77155363 MS.gene06366:CDS
GCAGCAGCAAAAGGAGATGG+AGG 0.644915 3.1:+77155775 MS.gene06366:CDS
TATTATGGCCTGAATGTGGT+TGG 0.649392 3.1:+77158646 MS.gene06366:CDS
AGCTTGTGCCCTCTGAACAG+CGG 0.653667 3.1:-77156005 None:intergenic
AGAACAACAGAGACTTGAGA+GGG 0.653891 3.1:+77155844 MS.gene06366:CDS
TGTGTTTGACCACGGTGTTG+GGG 0.654993 3.1:-77155351 None:intergenic
TGTGTCTTCAAACATAAAGA+GGG 0.655665 3.1:+77156945 MS.gene06366:CDS
GAGAAGATCATCAAACGCAA+CGG 0.656158 3.1:-77153263 None:intergenic
ACATTGATTTCAGAGGCTTG+CGG 0.656214 3.1:+77157990 MS.gene06366:intron
AGTACATATTCCCAAGTCAG+AGG 0.661965 3.1:+77155730 MS.gene06366:CDS
ACAGAAGAGTTAGACCTAGG+AGG 0.662653 3.1:-77156295 None:intergenic
CCTGAACTTGTGTTTGACCA+CGG 0.670451 3.1:-77155359 None:intergenic
GGAATATGTACTGGTCGAGG+AGG 0.673478 3.1:-77155719 None:intergenic
GTAACCACACCTTTGACGGG+AGG 0.676329 3.1:-77153374 None:intergenic
CAGGTATTATGGCCTGAATG+TGG 0.679133 3.1:+77158642 MS.gene06366:intron
AGTACATACATATTGTAAGG+TGG 0.690241 3.1:-77158079 None:intergenic
TGGGTCTGAAAAGTGGCCTG+AGG 0.703931 3.1:-77155168 None:intergenic
GCGTTTGATGATCTTCTCGG+CGG 0.720705 3.1:+77153268 MS.gene06366:CDS
GGACATGGAATCGAAACCGG+AGG 0.725329 3.1:-77153188 None:intergenic
AACCCACATGTAGATAACAG+TGG 0.744734 3.1:-77158906 None:intergenic
GCACCGATTCCCCAACACCG+TGG 0.760752 3.1:+77155342 MS.gene06366:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGAGTTTTAAATAAAAA+AGG + chr3.1:77156743-77156762 MS.gene06366:intron 10.0%
!!! AAAGAGTTTTAAATAAAAAA+GGG + chr3.1:77156744-77156763 MS.gene06366:intron 10.0%
!!! AAATGTAATTAATTTTGTAT+AGG - chr3.1:77156639-77156658 None:intergenic 10.0%
!! AAACATTATTTATACTAAAG+CGG + chr3.1:77156335-77156354 MS.gene06366:intron 15.0%
!! AAATAACATTAATGTTTCAT+TGG - chr3.1:77156505-77156524 None:intergenic 15.0%
!! ATATAATAATAGATAGCATA+AGG - chr3.1:77158136-77158155 None:intergenic 15.0%
!! CATTAATAATAAAAATGATG+GGG - chr3.1:77156391-77156410 None:intergenic 15.0%
!! GAAAGAATATTAAAAAAATC+TGG - chr3.1:77158182-77158201 None:intergenic 15.0%
!! GCATTAATAATAAAAATGAT+GGG - chr3.1:77156392-77156411 None:intergenic 15.0%
!! TGCATTAATAATAAAAATGA+TGG - chr3.1:77156393-77156412 None:intergenic 15.0%
!! TTAAGTTTAAACACAATTAT+CGG - chr3.1:77153848-77153867 None:intergenic 15.0%
!!! AAACTCTTTTAAAATAAAAG+TGG - chr3.1:77156733-77156752 None:intergenic 15.0%
!!! AAATGACAATTTAAAATTTG+AGG - chr3.1:77153902-77153921 None:intergenic 15.0%
!!! ATCATTTTTATTATTAATGC+AGG + chr3.1:77156392-77156411 MS.gene06366:intron 15.0%
!!! CTGATTCAAATATTTTAAAA+GGG - chr3.1:77155127-77155146 None:intergenic 15.0%
!!! TTTAGTTCAAAATTGTAAAT+TGG - chr3.1:77157311-77157330 None:intergenic 15.0%
!!! TTTTTCTTTTTAACAACTAA+TGG - chr3.1:77157471-77157490 None:intergenic 15.0%
!! AAACCATCATTAAAATAAGA+AGG - chr3.1:77155557-77155576 None:intergenic 20.0%
!! AAATAATGTTTATCAAGACA+TGG - chr3.1:77156326-77156345 None:intergenic 20.0%
!! AACCATCATTAAAATAAGAA+GGG - chr3.1:77155556-77155575 None:intergenic 20.0%
!! AACTAATACGTGAAAAATAA+GGG - chr3.1:77154978-77154997 None:intergenic 20.0%
!! AAGAGAGTAATAAATAGTTA+AGG - chr3.1:77156540-77156559 None:intergenic 20.0%
!! AATTTACTAATCTCTTCTAA+TGG - chr3.1:77155191-77155210 None:intergenic 20.0%
!! ACAAAATTGTCCTTAATAAA+TGG - chr3.1:77156593-77156612 None:intergenic 20.0%
!! AGAGAGTAATAAATAGTTAA+GGG - chr3.1:77156539-77156558 None:intergenic 20.0%
!! AGATTTGAATTGAAATCTTA+TGG + chr3.1:77154869-77154888 MS.gene06366:intron 20.0%
!! ATCAGGTAATTACTAAAATT+AGG + chr3.1:77158370-77158389 MS.gene06366:intron 20.0%
!! ATTTACTAATCTCTTCTAAT+GGG - chr3.1:77155190-77155209 None:intergenic 20.0%
!! TAAGTTTAAACACAATTATC+GGG - chr3.1:77153847-77153866 None:intergenic 20.0%
!! TAATTGTGTTTAAACTTAAG+TGG + chr3.1:77153849-77153868 MS.gene06366:intron 20.0%
!! TATGGATAACATATAAATAG+TGG - chr3.1:77158332-77158351 None:intergenic 20.0%
!! TATTCAAGGATAAAAGAATA+TGG - chr3.1:77153984-77154003 None:intergenic 20.0%
!! TTAAAAACACTATAAGTTAC+TGG - chr3.1:77158557-77158576 None:intergenic 20.0%
!! TTAGAAAGAAATGTATAGAA+AGG - chr3.1:77158835-77158854 None:intergenic 20.0%
!! TTAGAATCAGATGAATATTT+AGG - chr3.1:77155503-77155522 None:intergenic 20.0%
!! TTGAATGTAATCATATTTGT+TGG + chr3.1:77153657-77153676 MS.gene06366:intron 20.0%
!!! AATTTTAGTAATTACCTGAT+TGG - chr3.1:77158370-77158389 None:intergenic 20.0%
!!! AGTAACTTATAGTGTTTTTA+AGG + chr3.1:77158556-77158575 MS.gene06366:intron 20.0%
!!! AGTGCATTTTAGAATAATAA+CGG + chr3.1:77153821-77153840 MS.gene06366:intron 20.0%
!!! ATATATTTTGAACATGCAAT+GGG - chr3.1:77157772-77157791 None:intergenic 20.0%
!!! CGTTTTAAATGTTAAAAGTT+TGG + chr3.1:77156802-77156821 MS.gene06366:intron 20.0%
!!! GCTGATTCAAATATTTTAAA+AGG - chr3.1:77155128-77155147 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATAAT+AGG - chr3.1:77156530-77156549 None:intergenic 20.0%
!!! TATATATTTTGAACATGCAA+TGG - chr3.1:77157773-77157792 None:intergenic 20.0%
!!! TATTCTTTTATCCTTGAATA+TGG + chr3.1:77153984-77154003 MS.gene06366:intron 20.0%
!!! TCAGTGATTTAATTTTTGAA+CGG + chr3.1:77154558-77154577 MS.gene06366:intron 20.0%
!!! TGAAAGAGATAGTTTTTTAT+AGG - chr3.1:77157810-77157829 None:intergenic 20.0%
!!! TTGTTATTGATAGTAAAAGA+AGG + chr3.1:77157262-77157281 MS.gene06366:intron 20.0%
!!! TTTCTTTAAAAAAATGCTTG+AGG + chr3.1:77158156-77158175 MS.gene06366:intron 20.0%
! AAATGTTCCTATTTGACTAA+AGG - chr3.1:77154616-77154635 None:intergenic 25.0%
! AACTGAAAGAAAGAAAGAAA+TGG - chr3.1:77157506-77157525 None:intergenic 25.0%
! AATCATCCAACATAAAGATT+AGG - chr3.1:77157879-77157898 None:intergenic 25.0%
! AATGTTCCTATTTGACTAAA+GGG - chr3.1:77154615-77154634 None:intergenic 25.0%
! ACCATCATTAAAATAAGAAG+GGG - chr3.1:77155555-77155574 None:intergenic 25.0%
! AGTAGATCTTTCAAGAATAT+GGG + chr3.1:77154323-77154342 MS.gene06366:intron 25.0%
! ATATGTATGTACTAAGTACT+TGG + chr3.1:77158089-77158108 MS.gene06366:intron 25.0%
! ATTGTCCTTAATAAATGGTA+TGG - chr3.1:77156588-77156607 None:intergenic 25.0%
! CAACTAATACGTGAAAAATA+AGG - chr3.1:77154979-77154998 None:intergenic 25.0%
! CAATAACTTTCTTATTCCAT+AGG - chr3.1:77154822-77154841 None:intergenic 25.0%
! CTTAGTACATACATATTGTA+AGG - chr3.1:77158085-77158104 None:intergenic 25.0%
! CTTCAAACCATAAAAGAAAA+GGG - chr3.1:77157104-77157123 None:intergenic 25.0%
! CTTCTTAAATAAAAATGCAC+AGG - chr3.1:77154762-77154781 None:intergenic 25.0%
! GAAAGATCATCAACAATATT+AGG - chr3.1:77156982-77157001 None:intergenic 25.0%
! GATAGTTCATCAAATTCTAA+TGG + chr3.1:77155236-77155255 MS.gene06366:CDS 25.0%
! GGAATAAGAATAATCGAAAA+GGG + chr3.1:77154942-77154961 MS.gene06366:intron 25.0%
! TAAAGAGGTTTATCATAAAC+AGG - chr3.1:77153223-77153242 None:intergenic 25.0%
! TAGACAACTGAAATAAATCT+TGG + chr3.1:77154491-77154510 MS.gene06366:intron 25.0%
! TAGTAGATCTTTCAAGAATA+TGG + chr3.1:77154322-77154341 MS.gene06366:intron 25.0%
! TCCAAAACGTCATATAATTT+GGG + chr3.1:77156677-77156696 MS.gene06366:intron 25.0%
! TCCAAAATATGAAGAAAAGT+TGG + chr3.1:77155607-77155626 MS.gene06366:CDS 25.0%
! TGGAAAATGCTTATACAATA+TGG - chr3.1:77158350-77158369 None:intergenic 25.0%
! TGTAAAGCGACTTATAATTT+GGG - chr3.1:77156479-77156498 None:intergenic 25.0%
! TTAACAAACATGAAGAGAAT+GGG + chr3.1:77154921-77154940 MS.gene06366:intron 25.0%
! TTATCTGGTAGCTTATAAAA+CGG + chr3.1:77154795-77154814 MS.gene06366:intron 25.0%
! TTGTAAAGCGACTTATAATT+TGG - chr3.1:77156480-77156499 None:intergenic 25.0%
! TTGTCCTTAATAAATGGTAT+GGG - chr3.1:77156587-77156606 None:intergenic 25.0%
! TTTAACAAACATGAAGAGAA+TGG + chr3.1:77154920-77154939 MS.gene06366:intron 25.0%
! TTTGATATCTTGAAAGTGAA+AGG + chr3.1:77157410-77157429 MS.gene06366:intron 25.0%
!! AAAAGCTTTTGGTGAAATAT+TGG + chr3.1:77153772-77153791 MS.gene06366:intron 25.0%
!! AACCATTACCTTTTTATACT+AGG + chr3.1:77157610-77157629 MS.gene06366:intron 25.0%
!! ATGATTTGATCAATGGATTT+GGG + chr3.1:77153344-77153363 MS.gene06366:CDS 25.0%
!! CTAAAATTAGGTGCATTTTA+AGG + chr3.1:77158382-77158401 MS.gene06366:intron 25.0%
!! CTTTTTGCTTATCATGTATT+TGG + chr3.1:77154250-77154269 MS.gene06366:intron 25.0%
!! TTCAATTGATTCTTTATCTC+TGG - chr3.1:77155390-77155409 None:intergenic 25.0%
!! TTTTCAATTCTTACAAGTGT+CGG - chr3.1:77153627-77153646 None:intergenic 25.0%
!!! AACTTATAGTGTTTTTAAGG+TGG + chr3.1:77158559-77158578 MS.gene06366:intron 25.0%
!!! AGTGGATTTATCATTTTATC+TGG + chr3.1:77154780-77154799 MS.gene06366:intron 25.0%
!!! AGTGTTTTGTTTATAGCTTA+AGG + chr3.1:77154697-77154716 MS.gene06366:intron 25.0%
!!! CATGTTTTATTATATAGTGC+AGG - chr3.1:77154025-77154044 None:intergenic 25.0%
!!! CTTTTCTTTTTATTTGTGAC+CGG + chr3.1:77157717-77157736 MS.gene06366:intron 25.0%
!!! GATCATTTTCATTTTTTTGC+TGG - chr3.1:77156228-77156247 None:intergenic 25.0%
!!! GATTTTGATGATTTGATCAA+TGG + chr3.1:77153337-77153356 MS.gene06366:CDS 25.0%
!!! GTGCATTTTTATTTAAGAAG+TGG + chr3.1:77154762-77154781 MS.gene06366:intron 25.0%
!!! GTGTTTTGTTTATAGCTTAA+GGG + chr3.1:77154698-77154717 MS.gene06366:intron 25.0%
!!! TTTTCTTTTTATTTGTGACC+GGG + chr3.1:77157718-77157737 MS.gene06366:intron 25.0%
!!! TTTTTGAATTGGTTCATCAT+TGG + chr3.1:77154583-77154602 MS.gene06366:intron 25.0%
AAACCATAAAAGAAAAGGGA+TGG - chr3.1:77157100-77157119 None:intergenic 30.0%
AAACGTCATATAATTTGGGA+CGG + chr3.1:77156681-77156700 MS.gene06366:intron 30.0%
AAAGAAGAATTGAAAGGGAA+AGG + chr3.1:77155807-77155826 MS.gene06366:CDS 30.0%
AACACTAAGATCAATTTCGA+AGG - chr3.1:77154154-77154173 None:intergenic 30.0%
ACAACTGAAATAAATCTTGG+AGG + chr3.1:77154494-77154513 MS.gene06366:intron 30.0%
AGAGCAAAGAAGAATTGAAA+GGG + chr3.1:77155802-77155821 MS.gene06366:CDS 30.0%
AGATTACCACACAAAATGAT+AGG - chr3.1:77154392-77154411 None:intergenic 30.0%
AGCATCTTAAAGAAAAGAGT+TGG - chr3.1:77157531-77157550 None:intergenic 30.0%
AGTACATACATATTGTAAGG+TGG - chr3.1:77158082-77158101 None:intergenic 30.0%
AGTGGAGGAATTTAAATTAC+TGG - chr3.1:77158314-77158333 None:intergenic 30.0%
ATAAAAACCGTGCAAATTAG+CGG - chr3.1:77157932-77157951 None:intergenic 30.0%
ATACGTGAAAAATAAGGGAT+CGG - chr3.1:77154973-77154992 None:intergenic 30.0%
ATCACAGTCAATTGAAATGA+AGG + chr3.1:77158458-77158477 MS.gene06366:intron 30.0%
CAAACATACCATTGTTTGAA+AGG + chr3.1:77154430-77154449 MS.gene06366:intron 30.0%
CAACATAAAGATTAGGAAGT+TGG - chr3.1:77157872-77157891 None:intergenic 30.0%
CAACTTCCTAATCTTTATGT+TGG + chr3.1:77157870-77157889 MS.gene06366:intron 30.0%
CAATTGAAAAATTGTCTGTG+AGG + chr3.1:77155402-77155421 MS.gene06366:CDS 30.0%
CATAGACAAACAATTTGAAG+AGG - chr3.1:77157582-77157601 None:intergenic 30.0%
CGTTTATTAGCTACTGAATT+CGG + chr3.1:77153001-77153020 MS.gene06366:CDS 30.0%
CTCATGAAGTTATAATGTGT+AGG - chr3.1:77154679-77154698 None:intergenic 30.0%
CTTTCCCATACCATTTATTA+AGG + chr3.1:77156580-77156599 MS.gene06366:intron 30.0%
GCAATATACTGTTATTGATG+TGG + chr3.1:77157029-77157048 MS.gene06366:intron 30.0%
GCAGAAATATATTGCAGAAA+AGG + chr3.1:77158782-77158801 MS.gene06366:CDS 30.0%
GCAGAATATTATCTATTTGC+TGG + chr3.1:77154054-77154073 MS.gene06366:intron 30.0%
GCCAGTTGAAAATAATGATT+AGG + chr3.1:77158883-77158902 MS.gene06366:intron 30.0%
GCTTCAAACCATAAAAGAAA+AGG - chr3.1:77157105-77157124 None:intergenic 30.0%
GGATAACATATAAATAGTGG+AGG - chr3.1:77158329-77158348 None:intergenic 30.0%
GGGAATAAGAATAATCGAAA+AGG + chr3.1:77154941-77154960 MS.gene06366:intron 30.0%
GTCCAAAACGTCATATAATT+TGG + chr3.1:77156676-77156695 MS.gene06366:intron 30.0%
GTGTTGGGATAAAGAATAAA+GGG + chr3.1:77157352-77157371 MS.gene06366:intron 30.0%
TCAACAATATTAGGTGATGA+TGG - chr3.1:77156973-77156992 None:intergenic 30.0%
TCAATTGACTGTGATTGATT+TGG - chr3.1:77158453-77158472 None:intergenic 30.0%
TCGAAATTGATCTTAGTGTT+TGG + chr3.1:77154154-77154173 MS.gene06366:intron 30.0%
TCTGTAATGCTTTGTCTATT+AGG + chr3.1:77154846-77154865 MS.gene06366:intron 30.0%
TGAATGATGATCAGGTATTA+TGG + chr3.1:77158631-77158650 MS.gene06366:intron 30.0%
TGCCTAGTATAAAAAGGTAA+TGG - chr3.1:77157615-77157634 None:intergenic 30.0%
TGTGTCTTCAAACATAAAGA+GGG + chr3.1:77156945-77156964 MS.gene06366:CDS 30.0%
TGTTGGGATAAAGAATAAAG+GGG + chr3.1:77157353-77157372 MS.gene06366:intron 30.0%
TTAAAATAAGAAGGGGAAGT+AGG - chr3.1:77155548-77155567 None:intergenic 30.0%
TTAACTTATCGTTTCATCAC+AGG + chr3.1:77155027-77155046 MS.gene06366:intron 30.0%
TTAATTAAGAAGTTACGCTC+AGG - chr3.1:77153404-77153423 None:intergenic 30.0%
TTCTGTATCTCTTTACTTTC+AGG + chr3.1:77156870-77156889 MS.gene06366:intron 30.0%
TTGTGTTTAAACTTAAGTGG+TGG + chr3.1:77153852-77153871 MS.gene06366:intron 30.0%
TTTATGTTTGAAGACACAGT+TGG - chr3.1:77156943-77156962 None:intergenic 30.0%
TTTGCGAAAAACTGTATGTT+TGG + chr3.1:77154278-77154297 MS.gene06366:intron 30.0%
! AAAGGTTTTCGATCTACTAA+AGG + chr3.1:77158800-77158819 MS.gene06366:CDS 30.0%
! AATATATTTCTGCTGAAGAG+TGG - chr3.1:77158775-77158794 None:intergenic 30.0%
! AGTGTTGGGATAAAGAATAA+AGG + chr3.1:77157351-77157370 MS.gene06366:intron 30.0%
! ATAAGCCTTTTTAACAGTAG+CGG - chr3.1:77158703-77158722 None:intergenic 30.0%
! ATGAAGGGTTTAAAAGCTTT+TGG + chr3.1:77153761-77153780 MS.gene06366:intron 30.0%
! ATGCAAAAAGTATGACTCTA+TGG - chr3.1:77156839-77156858 None:intergenic 30.0%
! ATTGATTCCTATAGAAGTGT+TGG + chr3.1:77157336-77157355 MS.gene06366:intron 30.0%
! ATTTTCCGAACATTAAGAGT+TGG + chr3.1:77154200-77154219 MS.gene06366:intron 30.0%
! GACTTATAATTTGTGACGTA+GGG - chr3.1:77156436-77156455 None:intergenic 30.0%
! GATGATCTTTCCTCAATTTT+TGG + chr3.1:77156991-77157010 MS.gene06366:CDS 30.0%
! GATGATTTGATCAATGGATT+TGG + chr3.1:77153343-77153362 MS.gene06366:CDS 30.0%
! GCCAACTTTTCTTCATATTT+TGG - chr3.1:77155611-77155630 None:intergenic 30.0%
! GCCTAATCATTATTTTCAAC+TGG - chr3.1:77158887-77158906 None:intergenic 30.0%
! GTGAAATATTGGTTAGAGAT+TGG + chr3.1:77153783-77153802 MS.gene06366:intron 30.0%
! TAACAACTAATGGATAGTGT+AGG - chr3.1:77157461-77157480 None:intergenic 30.0%
! TACCTTTTTATACTAGGCAA+AGG + chr3.1:77157616-77157635 MS.gene06366:intron 30.0%
! TCCCAAATTATATGACGTTT+TGG - chr3.1:77156681-77156700 None:intergenic 30.0%
! TGACTTATAATTTGTGACGT+AGG - chr3.1:77156437-77156456 None:intergenic 30.0%
! TGTATAAGCATTTTCCAATC+AGG + chr3.1:77158353-77158372 MS.gene06366:intron 30.0%
! TTTCCATCCCTTTTCTTTTA+TGG + chr3.1:77157094-77157113 MS.gene06366:intron 30.0%
! TTTCGGTGTACATTAAATCA+CGG - chr3.1:77158500-77158519 None:intergenic 30.0%
! TTTGAACGGCATTTTTGAAT+TGG + chr3.1:77154572-77154591 MS.gene06366:intron 30.0%
!! ATGCTATATAGTTCTGATGA+AGG + chr3.1:77153745-77153764 MS.gene06366:intron 30.0%
!! CTTTTAAGAGGCTTTCATAT+AGG + chr3.1:77153948-77153967 MS.gene06366:intron 30.0%
!! TATCTACACATTGATTTCAG+AGG + chr3.1:77157983-77158002 MS.gene06366:intron 30.0%
!! TGCTATATAGTTCTGATGAA+GGG + chr3.1:77153746-77153765 MS.gene06366:intron 30.0%
!! TTGATTCCTATAGAAGTGTT+GGG + chr3.1:77157337-77157356 MS.gene06366:intron 30.0%
!!! CTTTTCTTTAAGATGCTAAC+TGG + chr3.1:77157534-77157553 MS.gene06366:intron 30.0%
!!! TCCCCTTCTTATTTTAATGA+TGG + chr3.1:77155551-77155570 MS.gene06366:CDS 30.0%
AAATCTTGGAGGAGTTTGTA+AGG + chr3.1:77154505-77154524 MS.gene06366:intron 35.0%
AAGAATTGAAAGGGAAAGGA+AGG + chr3.1:77155811-77155830 MS.gene06366:CDS 35.0%
AATCCTACCTCCAAAAATTG+AGG - chr3.1:77157004-77157023 None:intergenic 35.0%
AATCTTGGAGGAGTTTGTAA+GGG + chr3.1:77154506-77154525 MS.gene06366:intron 35.0%
ACCATTGTTTGAAAGGTAAC+AGG + chr3.1:77154437-77154456 MS.gene06366:intron 35.0%
AGATTCACGAAGGAACATTT+CGG - chr3.1:77158517-77158536 None:intergenic 35.0%
ATCATGATTGGAAGAGTGAA+AGG - chr3.1:77153131-77153150 None:intergenic 35.0%
ATGAAAGCCTCTTAAAAGAC+AGG - chr3.1:77153946-77153965 None:intergenic 35.0%
ATGTCATCATCATCATCCAA+AGG + chr3.1:77153052-77153071 MS.gene06366:CDS 35.0%
ATTCGGTCATTCGAAGAAAA+CGG + chr3.1:77153291-77153310 MS.gene06366:CDS 35.0%
CCAAACCAACTCTTAATGTT+CGG - chr3.1:77154208-77154227 None:intergenic 35.0%
CTGTGTCTTCAAACATAAAG+AGG + chr3.1:77156944-77156963 MS.gene06366:CDS 35.0%
CTTGTGAACTTCCATATTCA+AGG - chr3.1:77153998-77154017 None:intergenic 35.0%
CTTTATCCCAACACTTCTAT+AGG - chr3.1:77157346-77157365 None:intergenic 35.0%
GAATATTTAGGCATGCCATA+TGG - chr3.1:77155491-77155510 None:intergenic 35.0%
GAATTTCCAAGTCCATCAAA+AGG - chr3.1:77155284-77155303 None:intergenic 35.0%
GAGAGCAAAGAAGAATTGAA+AGG + chr3.1:77155801-77155820 MS.gene06366:CDS 35.0%
GATCTCAAAAGTGGCTATAA+TGG + chr3.1:77154176-77154195 MS.gene06366:intron 35.0%
GATTCTAATAAACCAGTAGC+TGG + chr3.1:77155515-77155534 MS.gene06366:CDS 35.0%
GGAAAGAGAAAATGAAAGAC+AGG + chr3.1:77155865-77155884 MS.gene06366:CDS 35.0%
GGGATTAGAATTGAAGAGAT+CGG - chr3.1:77153155-77153174 None:intergenic 35.0%
GTGTAGGTACAAGATTTCAT+TGG - chr3.1:77154663-77154682 None:intergenic 35.0%
GTTATCCTTGCAGTTAAACA+AGG + chr3.1:77154076-77154095 MS.gene06366:intron 35.0%
GTTGGATGATTGTGATTAGT+TGG + chr3.1:77157888-77157907 MS.gene06366:intron 35.0%
TACCTGATCATCATTCATGA+AGG - chr3.1:77158628-77158647 None:intergenic 35.0%
TAGCTTATAAAACGGACCTA+TGG + chr3.1:77154803-77154822 MS.gene06366:intron 35.0%
TAGTGTTTGGATCTCAAAAG+TGG + chr3.1:77154167-77154186 MS.gene06366:intron 35.0%
TATCAATAAACCTCAACCTC+AGG - chr3.1:77153570-77153589 None:intergenic 35.0%
TCATGACGATATATGGCTAA+CGG + chr3.1:77155637-77155656 MS.gene06366:CDS 35.0%
TGAAAGCCTCTTAAAAGACA+GGG - chr3.1:77153945-77153964 None:intergenic 35.0%
TGCAGTTAAACAAGGAATAC+TGG + chr3.1:77154084-77154103 MS.gene06366:intron 35.0%
TGCCTTTGCCTAGTATAAAA+AGG - chr3.1:77157621-77157640 None:intergenic 35.0%
TTAAACGAAATGCGATGCTT+AGG - chr3.1:77154905-77154924 None:intergenic 35.0%
TTGTTATGTGTTCGTCTATC+AGG - chr3.1:77155431-77155450 None:intergenic 35.0%
! AAGGGTTCTTATTTCAGTAG+TGG + chr3.1:77154716-77154735 MS.gene06366:intron 35.0%
! CTATAAGTTACTGGAGTGTT+TGG - chr3.1:77158548-77158567 None:intergenic 35.0%
! GAAGTTGGTTGTGTAAAAAG+AGG - chr3.1:77155674-77155693 None:intergenic 35.0%
! GATGATACTGATCCTTTTGA+TGG + chr3.1:77155269-77155288 MS.gene06366:CDS 35.0%
! GTATTCCTTGTTTAACTGCA+AGG - chr3.1:77154084-77154103 None:intergenic 35.0%
! TATAGCATCGAAACTTCTGA+TGG - chr3.1:77153733-77153752 None:intergenic 35.0%
! TCTGATGATGAACCAATATC+AGG - chr3.1:77155059-77155078 None:intergenic 35.0%
! TTGAATTGGTTCATCATTGG+TGG + chr3.1:77154586-77154605 MS.gene06366:intron 35.0%
! TTGGATGATGATGATGACAT+TGG - chr3.1:77153052-77153071 None:intergenic 35.0%
! TTGTCTCCTATCATTTTGTG+TGG + chr3.1:77154383-77154402 MS.gene06366:intron 35.0%
! TTTATACTAGGCAAAGGCAT+TGG + chr3.1:77157622-77157641 MS.gene06366:intron 35.0%
! TTTGCTTGCATTTGAAGCAA+CGG + chr3.1:77153505-77153524 MS.gene06366:intron 35.0%
!! AAAATGCACTGATTCTCCAA+TGG - chr3.1:77153811-77153830 None:intergenic 35.0%
!! AACATTAAGAGTTGGTTTGG+AGG + chr3.1:77154208-77154227 MS.gene06366:intron 35.0%
!! ACATTAAGAGTTGGTTTGGA+GGG + chr3.1:77154209-77154228 MS.gene06366:intron 35.0%
!! AGAGGAAGTTTTGGTGAAAT+TGG - chr3.1:77153083-77153102 None:intergenic 35.0%
!! GATCTTTCCTCAATTTTTGG+AGG + chr3.1:77156994-77157013 MS.gene06366:CDS 35.0%
!! TAACTCTTGGCTTTGATGTT+TGG + chr3.1:77156359-77156378 MS.gene06366:intron 35.0%
!! TTTCCTCAATTTTTGGAGGT+AGG + chr3.1:77156998-77157017 MS.gene06366:intron 35.0%
!! TTTTTGGAGGTAGGATTTTG+TGG + chr3.1:77157007-77157026 MS.gene06366:intron 35.0%
!!! TAGTGGATTTTTCTTCTCAG+CGG + chr3.1:77154733-77154752 MS.gene06366:intron 35.0%
AAAACGGTGAAGAATGAGAG+AGG + chr3.1:77153307-77153326 MS.gene06366:CDS 40.0%
AAAAGGGTCTTCTGTTGCAT+TGG - chr3.1:77155111-77155130 None:intergenic 40.0%
AACCCACATGTAGATAACAG+TGG - chr3.1:77158909-77158928 None:intergenic 40.0%
AACTCCTGATCATGTTCAAC+AGG - chr3.1:77155458-77155477 None:intergenic 40.0%
AAGTACTTGGTATAATGCCC+AGG + chr3.1:77158102-77158121 MS.gene06366:intron 40.0%
AGAAAATGAAAGACAGGCTG+TGG + chr3.1:77155871-77155890 MS.gene06366:CDS 40.0%
AGAACAACAGAGACTTGAGA+GGG + chr3.1:77155844-77155863 MS.gene06366:CDS 40.0%
AGAATTTCAGGAGGTTGAAG+GGG + chr3.1:77157140-77157159 MS.gene06366:CDS 40.0%
AGACAGGGAATGCATGATAT+CGG - chr3.1:77153930-77153949 None:intergenic 40.0%
AGCAATGAGGTGATTAGATG+AGG - chr3.1:77158210-77158229 None:intergenic 40.0%
AGGAGACAAACAAACGCATA+TGG - chr3.1:77154372-77154391 None:intergenic 40.0%
AGTACATATTCCCAAGTCAG+AGG + chr3.1:77155730-77155749 MS.gene06366:CDS 40.0%
AGTACTTGGTATAATGCCCA+GGG + chr3.1:77158103-77158122 MS.gene06366:intron 40.0%
ATACTAAAGCGGCTAACTCT+TGG + chr3.1:77156346-77156365 MS.gene06366:intron 40.0%
ATCTTGGAGGAGTTTGTAAG+GGG + chr3.1:77154507-77154526 MS.gene06366:intron 40.0%
ATGTGAATCGAAGTTGAGAG+AGG - chr3.1:77153101-77153120 None:intergenic 40.0%
ATGTTTGAAGACACAGTTGG+AGG - chr3.1:77156940-77156959 None:intergenic 40.0%
ATTGGAAGAGTGAAAGGATC+GGG - chr3.1:77153125-77153144 None:intergenic 40.0%
ATTGGCTGAGAAGAATCAAC+GGG + chr3.1:77157640-77157659 MS.gene06366:CDS 40.0%
CCATATATCGTCATGATCTG+AGG - chr3.1:77155633-77155652 None:intergenic 40.0%
CCTCAGATCATGACGATATA+TGG + chr3.1:77155630-77155649 MS.gene06366:CDS 40.0%
CTCCTTCATGAATGATGATC+AGG + chr3.1:77158623-77158642 MS.gene06366:intron 40.0%
CTGACACAGATGCATGTATT+GGG - chr3.1:77157841-77157860 None:intergenic 40.0%
CTTCTGATGGAAGACATGTT+TGG - chr3.1:77153720-77153739 None:intergenic 40.0%
GAAGAGATCGGAATCATGAT+TGG - chr3.1:77153143-77153162 None:intergenic 40.0%
GAATAAAGGGGAGTTAGAGA+AGG + chr3.1:77157365-77157384 MS.gene06366:intron 40.0%
GAGAAGATCATCAAACGCAA+CGG - chr3.1:77153266-77153285 None:intergenic 40.0%
GAGAATTTCAGGAGGTTGAA+GGG + chr3.1:77157139-77157158 MS.gene06366:CDS 40.0%
GAGTTTCATCAAGTGCCATA+TGG + chr3.1:77155473-77155492 MS.gene06366:CDS 40.0%
GATGAACCAATATCAGGAGT+GGG - chr3.1:77155053-77155072 None:intergenic 40.0%
GATTCCTGTTGAACATGATC+AGG + chr3.1:77155451-77155470 MS.gene06366:CDS 40.0%
GATTGGAAGAGTGAAAGGAT+CGG - chr3.1:77153126-77153145 None:intergenic 40.0%
GCCTGTTACCTTTCAAACAA+TGG - chr3.1:77154441-77154460 None:intergenic 40.0%
GGTGAAATTGGAAGATCCTT+TGG - chr3.1:77153071-77153090 None:intergenic 40.0%
TAATCTACTGACGACATTGC+AGG - chr3.1:77154110-77154129 None:intergenic 40.0%
TACAACATTGTCCACTGAGT+AGG - chr3.1:77158233-77158252 None:intergenic 40.0%
TACAGCCGCTACTGTTAAAA+AGG + chr3.1:77158695-77158714 MS.gene06366:CDS 40.0%
TACTACAGTGCTCTGTAAAG+AGG - chr3.1:77158417-77158436 None:intergenic 40.0%
TATTATGGCCTGAATGTGGT+TGG + chr3.1:77158646-77158665 MS.gene06366:CDS 40.0%
TGATGAACCAATATCAGGAG+TGG - chr3.1:77155054-77155073 None:intergenic 40.0%
TGGACTCCCTTTAGTCAAAT+AGG + chr3.1:77154606-77154625 MS.gene06366:intron 40.0%
TGGTTGCCTTCCTTTACTAT+TGG - chr3.1:77157291-77157310 None:intergenic 40.0%
TTGAAGGGGAAAGTGAAGAA+AGG + chr3.1:77157154-77157173 MS.gene06366:CDS 40.0%
! AAGTGGTGGAGACACATAAT+TGG + chr3.1:77153866-77153885 MS.gene06366:intron 40.0%
! ATCATAAACAGGCGAGTTGA+CGG - chr3.1:77153212-77153231 None:intergenic 40.0%
! CATATTTGTTGGTGTCTTGC+CGG + chr3.1:77153668-77153687 MS.gene06366:intron 40.0%
! CATTGGCTGAGAAGAATCAA+CGG + chr3.1:77157639-77157658 MS.gene06366:CDS 40.0%
! CCGAACATTAAGAGTTGGTT+TGG + chr3.1:77154205-77154224 MS.gene06366:intron 40.0%
! CTTCTAATGGGTCTGAAAAG+TGG - chr3.1:77155178-77155197 None:intergenic 40.0%
! GAAGTTGAGAGAGGAAGTTT+TGG - chr3.1:77153092-77153111 None:intergenic 40.0%
! GAATTCGGTTTGAAACCTCA+AGG + chr3.1:77153016-77153035 MS.gene06366:CDS 40.0%
! GTCATATAATTTGGGACGGA+GGG + chr3.1:77156685-77156704 MS.gene06366:intron 40.0%
! GTTGCGTTTGATGATCTTCT+CGG + chr3.1:77153265-77153284 MS.gene06366:CDS 40.0%
! TACCAGCATTTTCATCAGAG+AGG + chr3.1:77155306-77155325 MS.gene06366:CDS 40.0%
! TGCATTCCCTGTCTTTTAAG+AGG + chr3.1:77153936-77153955 MS.gene06366:intron 40.0%
! TTTTAGACCCGTCAATTCTC+GGG + chr3.1:77155574-77155593 MS.gene06366:CDS 40.0%
!! ACATTGATTTCAGAGGCTTG+CGG + chr3.1:77157990-77158009 MS.gene06366:intron 40.0%
!! GTTTTAGACCCGTCAATTCT+CGG + chr3.1:77155573-77155592 MS.gene06366:CDS 40.0%
!! TCTGACTTGGGAATATGTAC+TGG - chr3.1:77155731-77155750 None:intergenic 40.0%
!! TCTTTTTATTTGTGACCGGG+TGG + chr3.1:77157721-77157740 MS.gene06366:intron 40.0%
!!! ACTGATCCTTTTGATGGACT+TGG + chr3.1:77155275-77155294 MS.gene06366:CDS 40.0%
AAACCATGAGCAGCAGCAAA+AGG + chr3.1:77155766-77155785 MS.gene06366:CDS 45.0%
AAGAAGGGGAAGTAGGCATT+TGG - chr3.1:77155541-77155560 None:intergenic 45.0%
AAGACACAGTTGGAGGTTTC+TGG - chr3.1:77156933-77156952 None:intergenic 45.0%
ACAGAAGAGTTAGACCTAGG+AGG - chr3.1:77156298-77156317 None:intergenic 45.0%
AGAAAGGCGAAAAGCCAGAT+TGG + chr3.1:77157170-77157189 MS.gene06366:CDS 45.0%
AGGAGAGAGTCTCTTCTCTA+AGG - chr3.1:77157441-77157460 None:intergenic 45.0%
AGGCCACTGTTATCTACATG+TGG + chr3.1:77158903-77158922 MS.gene06366:intron 45.0%
ATATCTGCCCGAGAATTGAC+GGG - chr3.1:77155584-77155603 None:intergenic 45.0%
ATGTAGTGAGACTGAACCTG+AGG + chr3.1:77153551-77153570 MS.gene06366:intron 45.0%
ATTGGTGCAGATTTGCCTTG+AGG - chr3.1:77153034-77153053 None:intergenic 45.0%
CAGGTATTATGGCCTGAATG+TGG + chr3.1:77158642-77158661 MS.gene06366:intron 45.0%
CATATCTGCCCGAGAATTGA+CGG - chr3.1:77155585-77155604 None:intergenic 45.0%
CCAATACATGCATCTGTGTC+AGG + chr3.1:77157839-77157858 MS.gene06366:intron 45.0%
CCTGAACTTGTGTTTGACCA+CGG - chr3.1:77155362-77155381 None:intergenic 45.0%
CCTGACACAGATGCATGTAT+TGG - chr3.1:77157842-77157861 None:intergenic 45.0%
CCTGATAAAGTGCAGCAGAA+GGG + chr3.1:77158747-77158766 MS.gene06366:CDS 45.0%
CTCACAGAAGAGTTAGACCT+AGG - chr3.1:77156301-77156320 None:intergenic 45.0%
CTCAGTAACCACACCTTTGA+CGG - chr3.1:77153381-77153400 None:intergenic 45.0%
GAGAACAACAGAGACTTGAG+AGG + chr3.1:77155843-77155862 MS.gene06366:CDS 45.0%
GGAGAATTTCAGGAGGTTGA+AGG + chr3.1:77157138-77157157 MS.gene06366:CDS 45.0%
GGCAAAGAAAAGGGCTGAAA+AGG + chr3.1:77156054-77156073 MS.gene06366:CDS 45.0%
GGCCACTGTTATCTACATGT+GGG + chr3.1:77158904-77158923 MS.gene06366:intron 45.0%
GGTAGCGTATGATCTAGTGA+AGG + chr3.1:77153526-77153545 MS.gene06366:intron 45.0%
GGTCAAACACAAGTTCAGGT+TGG + chr3.1:77155363-77155382 MS.gene06366:CDS 45.0%
GTCCTCTCTGATGAAAATGC+TGG - chr3.1:77155311-77155330 None:intergenic 45.0%
GTGCAAATTAGCGGAGAACT+CGG - chr3.1:77157923-77157942 None:intergenic 45.0%
TCAGTAACCACACCTTTGAC+GGG - chr3.1:77153380-77153399 None:intergenic 45.0%
TCATTCGCTCTGCTCATTAC+AGG + chr3.1:77158283-77158302 MS.gene06366:intron 45.0%
TCCTGAAATTCTCCAGCTGA+GGG - chr3.1:77157132-77157151 None:intergenic 45.0%
TCCTGATAAAGTGCAGCAGA+AGG + chr3.1:77158746-77158765 MS.gene06366:CDS 45.0%
TCTGCTCTCTTTGAGTCTGT+AGG - chr3.1:77157667-77157686 None:intergenic 45.0%
TGAATCGTTCTTCAGCGTGA+GGG + chr3.1:77156249-77156268 MS.gene06366:CDS 45.0%
TGAGGATGAATCAGTTGGAG+CGG - chr3.1:77155153-77155172 None:intergenic 45.0%
TGATGCACAATTTCAGCCAG+AGG + chr3.1:77156903-77156922 MS.gene06366:CDS 45.0%
TGCTGCTGAGGCAAAGAAAA+GGG + chr3.1:77156045-77156064 MS.gene06366:CDS 45.0%
TTGAATCGTTCTTCAGCGTG+AGG + chr3.1:77156248-77156267 MS.gene06366:CDS 45.0%
TTGTGTTTGACCACGGTGTT+GGG - chr3.1:77155355-77155374 None:intergenic 45.0%
! CGTCATATAATTTGGGACGG+AGG + chr3.1:77156684-77156703 MS.gene06366:intron 45.0%
! GAGTTCTCCGCTAATTTGCA+CGG + chr3.1:77157922-77157941 MS.gene06366:intron 45.0%
! GGAGTTTGTAAGGGGTACAT+AGG + chr3.1:77154515-77154534 MS.gene06366:intron 45.0%
! GTGAAGAATGAGAGAGGTGT+CGG + chr3.1:77153313-77153332 MS.gene06366:CDS 45.0%
! TCAGAGAGGACTAGCAGATA+TGG + chr3.1:77155320-77155339 MS.gene06366:CDS 45.0%
! TGGTTAGAGATTGGCTCCAT+TGG + chr3.1:77153792-77153811 MS.gene06366:intron 45.0%
! TTGGGAATATGTACTGGTCG+AGG - chr3.1:77155725-77155744 None:intergenic 45.0%
!! GGACTTTGAAGTTAAGCGCT+GGG + chr3.1:77158020-77158039 MS.gene06366:CDS 45.0%
!! TGGACTTTGAAGTTAAGCGC+TGG + chr3.1:77158019-77158038 MS.gene06366:CDS 45.0%
AAGCTAGAGTGCGTGCTGAA+AGG + chr3.1:77155981-77156000 MS.gene06366:CDS 50.0%
ACAAGCTGAAGCCCGTGAAA+GGG + chr3.1:77156021-77156040 MS.gene06366:CDS 50.0%
ACCTCATTGCTCCTACTCAG+TGG + chr3.1:77158219-77158238 MS.gene06366:intron 50.0%
ACTGCTTCTCTCCTCTGACT+TGG - chr3.1:77155744-77155763 None:intergenic 50.0%
AGCATAAGGCAGCAAACCCT+GGG - chr3.1:77158122-77158141 None:intergenic 50.0%
AGCTAGAGTGCGTGCTGAAA+GGG + chr3.1:77155982-77156001 MS.gene06366:CDS 50.0%
AGGGTCTTCTGTTGCATTGG+AGG - chr3.1:77155108-77155127 None:intergenic 50.0%
CACGTGTCAGTGTCAAACAC+CGG - chr3.1:77153690-77153709 None:intergenic 50.0%
CAGATTGGAACGCCTTCAGA+GGG + chr3.1:77157185-77157204 MS.gene06366:CDS 50.0%
CAGGGAATGCATGATATCGG+TGG - chr3.1:77153927-77153946 None:intergenic 50.0%
CCCTTCTGCTGCACTTTATC+AGG - chr3.1:77158750-77158769 None:intergenic 50.0%
CCGTGGTCAAACACAAGTTC+AGG + chr3.1:77155359-77155378 MS.gene06366:CDS 50.0%
CCTCTTTACGACGACGATGA+CGG + chr3.1:77153235-77153254 MS.gene06366:CDS 50.0%
CTCAGCTGGAGAATTTCAGG+AGG + chr3.1:77157131-77157150 MS.gene06366:CDS 50.0%
CTCCTGAAATTCTCCAGCTG+AGG - chr3.1:77157133-77157152 None:intergenic 50.0%
CTGCTGCTGAGGCAAAGAAA+AGG + chr3.1:77156044-77156063 MS.gene06366:CDS 50.0%
CTGCTTCTCTCCTCTGACTT+GGG - chr3.1:77155743-77155762 None:intergenic 50.0%
CTGTATGAGCAGAAACCACC+CGG - chr3.1:77157739-77157758 None:intergenic 50.0%
CTTGTGTTTGACCACGGTGT+TGG - chr3.1:77155356-77155375 None:intergenic 50.0%
GAATCGTTCTTCAGCGTGAG+GGG + chr3.1:77156250-77156269 MS.gene06366:CDS 50.0%
GACGGACATGGAATCGAAAC+CGG - chr3.1:77153194-77153213 None:intergenic 50.0%
GGCTGCTTCAAGATTCACGA+AGG - chr3.1:77158527-77158546 None:intergenic 50.0%
TAGCATAAGGCAGCAAACCC+TGG - chr3.1:77158123-77158142 None:intergenic 50.0%
TCCACTGAGTAGGAGCAATG+AGG - chr3.1:77158223-77158242 None:intergenic 50.0%
TCCCTCAGCTGGAGAATTTC+AGG + chr3.1:77157128-77157147 MS.gene06366:CDS 50.0%
TGAGACTGAACCTGAGGTTG+AGG + chr3.1:77153557-77153576 MS.gene06366:intron 50.0%
TGAGCAGCAGCAAAAGGAGA+TGG + chr3.1:77155772-77155791 MS.gene06366:CDS 50.0%
TGGCCTGAGGATGAATCAGT+TGG - chr3.1:77155158-77155177 None:intergenic 50.0%
! AGAACGTGCTGCTGTGGAAA+GGG + chr3.1:77156156-77156175 MS.gene06366:CDS 50.0%
! ATATGTACTGGTCGAGGAGG+AGG - chr3.1:77155719-77155738 None:intergenic 50.0%
! GATGATCTTCTCGGCGGATT+CGG + chr3.1:77153274-77153293 MS.gene06366:CDS 50.0%
! GCGTTTGATGATCTTCTCGG+CGG + chr3.1:77153268-77153287 MS.gene06366:CDS 50.0%
! GCTCCAACTGATTCATCCTC+AGG + chr3.1:77155152-77155171 MS.gene06366:CDS 50.0%
! GGAATATGTACTGGTCGAGG+AGG - chr3.1:77155722-77155741 None:intergenic 50.0%
! TAAAGCAGAACGTGCTGCTG+TGG + chr3.1:77156150-77156169 MS.gene06366:CDS 50.0%
! TCTCCTTTTGCTGCTGCTCA+TGG - chr3.1:77155772-77155791 None:intergenic 50.0%
! TGTGTTTGACCACGGTGTTG+GGG - chr3.1:77155354-77155373 None:intergenic 50.0%
! TTTGAAGCATCTCCCTCAGC+TGG + chr3.1:77157117-77157136 MS.gene06366:intron 50.0%
!! GAGTTGGTTTGGAGGGAAAG+AGG + chr3.1:77154216-77154235 MS.gene06366:intron 50.0%
!! GGAGGTTTCTGGTTTACCTC+TGG - chr3.1:77156922-77156941 None:intergenic 50.0%
AAAGGCTGCTGCAGGGGAAA+AGG + chr3.1:77156072-77156091 MS.gene06366:CDS 55.0%
AAGTCCTCCCGTCAAAGGTG+TGG + chr3.1:77153370-77153389 MS.gene06366:intron 55.0%
ACTGCCTGCCAACCACATTC+AGG - chr3.1:77158657-77158676 None:intergenic 55.0%
AGCAGCTGCAGCTCTTTCTC+GGG - chr3.1:77156194-77156213 None:intergenic 55.0%
AGCTCGCCAAAGAGCTGAGA+AGG + chr3.1:77155934-77155953 MS.gene06366:CDS 55.0%
AGCTTGTGCCCTCTGAACAG+CGG - chr3.1:77156008-77156027 None:intergenic 55.0%
ATGGCCTGAATGTGGTTGGC+AGG + chr3.1:77158650-77158669 MS.gene06366:CDS 55.0%
CACAAGCTGAAGCCCGTGAA+AGG + chr3.1:77156020-77156039 MS.gene06366:CDS 55.0%
CACAGGCCCACTCCTGATAT+TGG + chr3.1:77155044-77155063 MS.gene06366:intron 55.0%
CAGCAGCCTTCTCAGCTCTT+TGG - chr3.1:77155943-77155962 None:intergenic 55.0%
CAGCAGCTGCAGCTCTTTCT+CGG - chr3.1:77156195-77156214 None:intergenic 55.0%
CCAGATTGGAACGCCTTCAG+AGG + chr3.1:77157184-77157203 MS.gene06366:CDS 55.0%
CCGTCATCGTCGTCGTAAAG+AGG - chr3.1:77153238-77153257 None:intergenic 55.0%
GAGAAAGAGCTGCAGCTGCA+AGG + chr3.1:77156107-77156126 MS.gene06366:CDS 55.0%
GAGTTAGACCTAGGAGGCCT+TGG - chr3.1:77156292-77156311 None:intergenic 55.0%
GCAGCAGCAAAAGGAGATGG+AGG + chr3.1:77155775-77155794 MS.gene06366:CDS 55.0%
GGAACAAGTCCTCCCGTCAA+AGG + chr3.1:77153365-77153384 MS.gene06366:CDS 55.0%
GGACATGGAATCGAAACCGG+AGG - chr3.1:77153191-77153210 None:intergenic 55.0%
GTAACCACACCTTTGACGGG+AGG - chr3.1:77153377-77153396 None:intergenic 55.0%
GTAGGCATTTGGCCAGCTAC+TGG - chr3.1:77155530-77155549 None:intergenic 55.0%
TCAGAGGCTTGCGGAAACAC+TGG + chr3.1:77157999-77158018 MS.gene06366:intron 55.0%
TGAAAGGGCCGCTGTTCAGA+GGG + chr3.1:77155997-77156016 MS.gene06366:CDS 55.0%
TGGGTCTGAAAAGTGGCCTG+AGG - chr3.1:77155171-77155190 None:intergenic 55.0%
! AACAGGCGAGTTGACGGACA+TGG - chr3.1:77153206-77153225 None:intergenic 55.0%
! CAGAACGTGCTGCTGTGGAA+AGG + chr3.1:77156155-77156174 MS.gene06366:CDS 55.0%
! TGACCACGGTGTTGGGGAAT+CGG - chr3.1:77155348-77155367 None:intergenic 55.0%
!! AAGTTAAGCGCTGGGCTGCA+GGG + chr3.1:77158028-77158047 MS.gene06366:CDS 55.0%
!! CAAGTGTCGGCGTGTGAGTA+TGG - chr3.1:77153614-77153633 None:intergenic 55.0%
!! CCTCTGAAGGCGTTCCAATC+TGG - chr3.1:77157187-77157206 None:intergenic 55.0%
!! GAAGGTGGTGGAGCAGAAGT+TGG - chr3.1:77155689-77155708 None:intergenic 55.0%
AGGGCTGAAAAGGCTGCTGC+AGG + chr3.1:77156064-77156083 MS.gene06366:CDS 60.0%
ATAGCGCTCCAAGGCCTCCT+AGG + chr3.1:77156281-77156300 MS.gene06366:CDS 60.0%
CCCATCTCTCGTAGCACCTC+CGG + chr3.1:77153172-77153191 MS.gene06366:CDS 60.0%
CCTCAGCAGCAGCCCTTTCA+CGG - chr3.1:77156036-77156055 None:intergenic 60.0%
CGTTCTTCAGCGTGAGGGGA+CGG + chr3.1:77156254-77156273 MS.gene06366:CDS 60.0%
CTCAGCAGCAGCCCTTTCAC+GGG - chr3.1:77156035-77156054 None:intergenic 60.0%
CTGAAAGGGCCGCTGTTCAG+AGG + chr3.1:77155996-77156015 MS.gene06366:CDS 60.0%
GGCTGAAAAGGCTGCTGCAG+GGG + chr3.1:77156066-77156085 MS.gene06366:CDS 60.0%
GGGCTGAAAAGGCTGCTGCA+GGG + chr3.1:77156065-77156084 MS.gene06366:CDS 60.0%
GTTCTTCAGCGTGAGGGGAC+GGG + chr3.1:77156255-77156274 MS.gene06366:CDS 60.0%
TGTGGAAAGGGCTGCTGCAG+AGG + chr3.1:77156168-77156187 MS.gene06366:CDS 60.0%
! AGGAGGCCTTGGAGCGCTAT+TGG - chr3.1:77156281-77156300 None:intergenic 60.0%
! CGAGGAGGAGGTGGTCTTGA+AGG - chr3.1:77155707-77155726 None:intergenic 60.0%
! GGAGGAGGTGGTCTTGAAGG+TGG - chr3.1:77155704-77155723 None:intergenic 60.0%
! GGAGGTGGTCTTGAAGGTGG+TGG - chr3.1:77155701-77155720 None:intergenic 60.0%
! TGTACTGGTCGAGGAGGAGG+TGG - chr3.1:77155716-77155735 None:intergenic 60.0%
!! ACCGGAGGTGCTACGAGAGA+TGG - chr3.1:77153176-77153195 None:intergenic 60.0%
!! CCGGAGGTGCTACGAGAGAT+GGG - chr3.1:77153175-77153194 None:intergenic 60.0%
!! GAAGTTAAGCGCTGGGCTGC+AGG + chr3.1:77158027-77158046 MS.gene06366:CDS 60.0%
CCGTGAAAGGGCTGCTGCTG+AGG + chr3.1:77156033-77156052 MS.gene06366:CDS 65.0%
CGCTGGGCTGCAGGGAAAGA+GGG + chr3.1:77158036-77158055 MS.gene06366:CDS 65.0%
GACGGGCCAATAGCGCTCCA+AGG + chr3.1:77156272-77156291 MS.gene06366:CDS 65.0%
GCTGGGCTGCAGGGAAAGAG+GGG + chr3.1:77158037-77158056 MS.gene06366:CDS 65.0%
GGAACGCCTTCAGAGGGCTC+AGG + chr3.1:77157191-77157210 MS.gene06366:CDS 65.0%
!! GCACCGATTCCCCAACACCG+TGG + chr3.1:77155342-77155361 MS.gene06366:CDS 65.0%
CGCGCTCCTGAGCCCTCTGA+AGG - chr3.1:77157200-77157219 None:intergenic 70.0%
GCGCTGGGCTGCAGGGAAAG+AGG + chr3.1:77158035-77158054 MS.gene06366:CDS 70.0%
! TCAGAGGGCTCAGGAGCGCG+CGG + chr3.1:77157200-77157219 MS.gene06366:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 77152986 77158937 77152986 ID=MS.gene06366
chr3.1 mRNA 77152986 77158937 77152986 ID=MS.gene06366.t1;Parent=MS.gene06366
chr3.1 exon 77152986 77153386 77152986 ID=MS.gene06366.t1.exon1;Parent=MS.gene06366.t1
chr3.1 CDS 77152986 77153386 77152986 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77155049 77156315 77155049 ID=MS.gene06366.t1.exon2;Parent=MS.gene06366.t1
chr3.1 CDS 77155049 77156315 77155049 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77156892 77157015 77156892 ID=MS.gene06366.t1.exon3;Parent=MS.gene06366.t1
chr3.1 CDS 77156892 77157015 77156892 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77157124 77157221 77157124 ID=MS.gene06366.t1.exon4;Parent=MS.gene06366.t1
chr3.1 CDS 77157124 77157221 77157124 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77157632 77157697 77157632 ID=MS.gene06366.t1.exon5;Parent=MS.gene06366.t1
chr3.1 CDS 77157632 77157697 77157632 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77158003 77158092 77158003 ID=MS.gene06366.t1.exon6;Parent=MS.gene06366.t1
chr3.1 CDS 77158003 77158092 77158003 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77158645 77158821 77158645 ID=MS.gene06366.t1.exon7;Parent=MS.gene06366.t1
chr3.1 CDS 77158645 77158821 77158645 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
chr3.1 exon 77158905 77158937 77158905 ID=MS.gene06366.t1.exon8;Parent=MS.gene06366.t1
chr3.1 CDS 77158905 77158937 77158905 ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1
Gene Sequence

>MS.gene06366

ATGAACGATTTCGATCGTTTATTAGCTACTGAATTCGGTTTGAAACCTCAAGGCAAATCTGCACCAATGTCATCATCATCATCCAAAGGATCTTCCAATTTCACCAAAACTTCCTCTCTCAACTTCGATTCACATTCCCGATCCTTTCACTCTTCCAATCATGATTCCGATCTCTTCAATTCTAATCCCATCTCTCGTAGCACCTCCGGTTTCGATTCCATGTCCGTCAACTCGCCTGTTTATGATAAACCTCTTTACGACGACGATGACGGAAGTGCCGTTGCGTTTGATGATCTTCTCGGCGGATTCGGTCATTCGAAGAAAACGGTGAAGAATGAGAGAGGTGTCGGTGATTTTGATGATTTGATCAATGGATTTGGGAACAAGTCCTCCCGTCAAAGGTGTGGTTACTGAGCCTGAGCGTAACTTCTTAATTAAGCTTGTTTGTAATGTACTTTACATGCATGATCAAATGCATTTTAGTTTAAAGTATAGTTTATTTATTGATTTTTTTTTTTTTTTGCTTGCATTTGAAGCAACGGTAGCGTATGATCTAGTGAAGGCTATGTAGTGAGACTGAACCTGAGGTTGAGGTTTATTGATATGTGTGAAAATTTATGAAACACCATACTCACACGCCGACACTTGTAAGAATTGAAAAGCTGAATTAATTGAATGTAATCATATTTGTTGGTGTCTTGCCGGTGTTTGACACTGACACGTGTTAGACACCAAACATGTCTTCCATCAGAAGTTTCGATGCTATATAGTTCTGATGAAGGGTTTAAAAGCTTTTGGTGAAATATTGGTTAGAGATTGGCTCCATTGGAGAATCAGTGCATTTTAGAATAATAACGGCCCGATAATTGTGTTTAAACTTAAGTGGTGGAGACACATAATTGGCTATAGTCTTCCTCAAATTTTAAATTGTCATTTATCCACCGATATCATGCATTCCCTGTCTTTTAAGAGGCTTTCATATAGGATTAAGTCGTCCATATTCTTTTATCCTTGAATATGGAAGTTCACAAGTTCACCTGCACTATATAATAAAACATGTTACGACTTGCAGAATATTATCTATTTGCTGGTTATCCTTGCAGTTAAACAAGGAATACTGGCCTGCAATGTCGTCAGTAGATTATTGTCTGAGTTTTTTCTTGTACCTTCGAAATTGATCTTAGTGTTTGGATCTCAAAAGTGGCTATAATGGTATTTTCCGAACATTAAGAGTTGGTTTGGAGGGAAAGAGGATGCTTCTTTGCTTTTTGCTTATCATGTATTTGGTTATGTTTGCGAAAAACTGTATGTTTGGCTGTGATGATCGTGTGCTGTTTAGTAGATCTTTCAAGAATATGGGATGTCTTATGCATTTTGAATTTACCATATGCGTTTGTTTGTCTCCTATCATTTTGTGTGGTAATCTATGCAGTTGATATCTAAGCAAACATACCATTGTTTGAAAGGTAACAGGCAGTTATGCTTGCTAATTTTATTCATTAAAGTAGACAACTGAAATAAATCTTGGAGGAGTTTGTAAGGGGTACATAGGCACTGATGAGCTGAGTTTCTTCAGTGATTTAATTTTTGAACGGCATTTTTGAATTGGTTCATCATTGGTGGACTCCCTTTAGTCAAATAGGAACATTTTAATACAAAAAAGCATGAGTGATTCCAATGAAATCTTGTACCTACACATTATAACTTCATGAGTGTTTTGTTTATAGCTTAAGGGTTCTTATTTCAGTAGTGGATTTTTCTTCTCAGCGGATTCCTGTGCATTTTTATTTAAGAAGTGGATTTATCATTTTATCTGGTAGCTTATAAAACGGACCTATGGAATAAGAAAGTTATTGTTGTTCTGTAATGCTTTGTCTATTAGGAGATTTGAATTGAAATCTTATGGCTTTGTTGTTCCTAAGCATCGCATTTCGTTTAACAAACATGAAGAGAATGGGAATAAGAATAATCGAAAAGGGACAATCCGATCCCTTATTTTTCACGTATTAGTTGATCTGTTGATGTATCATAATATATTATTTTAACTTATCGTTTCATCACAGGCCCACTCCTGATATTGGTTCATCATCAGAATCTACTTTCAGTGCATCTAAAACAACCTCCAATGCAACAGAAGACCCTTTTAAAATATTTGAATCAGCTTCCGCTCCAACTGATTCATCCTCAGGCCACTTTTCAGACCCATTAGAAGAGATTAGTAAATTTACTAGTTCTAAAAGCACAAAAAATGATAGTTCATCAAATTCTAATGGTGCAGTATATGATGATACTGATCCTTTTGATGGACTTGGAAATTCAGTACCAGCATTTTCATCAGAGAGGACTAGCAGATATGGCACCGATTCCCCAACACCGTGGTCAAACACAAGTTCAGGTTGGACCAGAGATAAAGAATCAATTGAAAAATTGTCTGTGAGGAGTCCTGATAGACGAACACATAACAAGATTCCTGTTGAACATGATCAGGAGTTTCATCAAGTGCCATATGGCATGCCTAAATATTCATCTGATTCTAATAAACCAGTAGCTGGCCAAATGCCTACTTCCCCTTCTTATTTTAATGATGGTTTTAGACCCGTCAATTCTCGGGCAGATATGTCTCCAAAATATGAAGAAAAGTTGGCCTCAGATCATGACGATATATGGCTAACGGTATCAGAGATTCCTCTTTTTACACAACCAACTTCTGCTCCACCACCTTCAAGACCACCTCCTCCTCGACCAGTACATATTCCCAAGTCAGAGGAGAGAAGCAGTTCAAACCATGAGCAGCAGCAAAAGGAGATGGAGGATAGAGAGCAAAGAAGAATTGAAAGGGAAAGGAAGGAGAAAGAAAGAGAACAACAGAGACTTGAGAGGGAAAGAGAAAATGAAAGACAGGCTGTGGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAAGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCCGCTGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGAAAAGGGCTGAAAAGGCTGCTGCAGGGGAAAAGGTGAGAGAAGCACGAGAAAGAGCTGCAGCTGCAAGGACTGAAGCTGAAGCACGAGTTAAAGCAGAACGTGCTGCTGTGGAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGAATGTACCAGCAAAAAAATGAAAATGATCTTGAATCGTTCTTCAGCGTGAGGGGACGGGCCAATAGCGCTCCAAGGCCTCCTAGGTCTAACTCTTCTGTGAGTACCATGTCTTGATAAACATTATTTATACTAAAGCGGCTAACTCTTGGCTTTGATGTTTGGTCTCTTCCCCATCATTTTTATTATTAATGCAGGAACTTAAATTTAGTTACTCCCTACGTCACAAATTATAAGTCACTTTTTAAAACAAAATTGTCCCAAATTATAAGTCGCTTTACAATACCAATGAAACATTAATGTTATTTTTCCTATTATACCCTTAACTATTTATTACTCTCTTCTTTCAATTCTTTAATTTATCTTTCCCATACCATTTATTAAGGACAATTTTGTAAAACAACTCATAATATCTCTTTCCTATACAAAATTAATTACATTTCTTAATATGTGTGAAATGTCCAAAACGTCATATAATTTGGGACGGAGGGAGTAGTTGTTATTTTATTCTTTCCACTTTTATTTTAAAAGAGTTTTAAATAAAAAAGGGATGTATAAAATTGTCAAGTTTTAAAATTATTCATACGTTTTAAATGTTAAAAGTTTGGCTAACAAGCAGCCATAGAGTCATACTTTTTGCATTTTGAAAGAAGTTCTGTATCTCTTTACTTTCAGGATTCAGTTTTTGATGCACAATTTCAGCCAGAGGTAAACCAGAAACCTCCAACTGTGTCTTCAAACATAAAGAGGGCACCATCATCACCTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGGTAGGATTTTGTGGCAATATACTGTTATTGATGTGGAAGTTGTTTGAATTTTCTTTTGTCTCAATGCTTATTTGTCTTTTTCCATCCCTTTTCTTTTATGGTTTGAAGCATCTCCCTCAGCTGGAGAATTTCAGGAGGTTGAAGGGGAAAGTGAAGAAAGGCGAAAAGCCAGATTGGAACGCCTTCAGAGGGCTCAGGAGCGCGCGGTATGTTTTTTGTATTTTGTTCTTTAATTTGTCTTCTTCATTGTTATTGATAGTAAAAGAAGGCAACCAATAGTAAAGGAAGGCAACCAATTTACAATTTTGAACTAAATTGACATTGATTCCTATAGAAGTGTTGGGATAAAGAATAAAGGGGAGTTAGAGAAGGATAGAGAAAATAGTTCTGTACATTTGATATCTTGAAAGTGAAAGGAGAAACCTTAGAGAAGAGACTCTCTCCTACACTATCCATTAGTTGTTAAAAAGAAAAAAATGTTCTCTTACCATTTCTTTCTTTCTTTCAGTTTTCCAACTCTTTTCTTTAAGATGCTAACTGGAAGCGTGTGCATTATTGAATAACCTCTTCAAATTGTTTGTCTATGTTACATATAACCATTACCTTTTTATACTAGGCAAAGGCATTGGCTGAGAAGAATCAACGGGACCTACAGACTCAAAGAGAGCAGAATGAGAGACATGTAAGTAGTATATTTGTTGCTTTTCTTTTTATTTGTGACCGGGTGGTTTCTGCTCATACAGTTGCATTATGCCCATTGCATGTTCAAAATATATATCTCTGTCATCTTGCCTATAAAAAACTATCTCTTTCATTCATTTTCCCAATACATGCATCTGTGTCAGGTAATTGTCCAACTTCCTAATCTTTATGTTGGATGATTGTGATTAGTTGGATGTTACTTCCGAGTTCTCCGCTAATTTGCACGGTTTTTATTGTCATGTGTTTTATTTTTACTATCTAATTTTATCTACACATTGATTTCAGAGGCTTGCGGAAACACTGGACTTTGAAGTTAAGCGCTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTCTACTCTCCACCTTACAATATGTATGTACTAAGTACTTGGTATAATGCCCAGGGTTTGCTGCCTTATGCTATCTATTATTATATTTTCTTTAAAAAAATGCTTGAGGCCAGATTTTTTTAATATTCTTTCGTTTGCCTCATCTAATCACCTCATTGCTCCTACTCAGTGGACAATGTTGTAACTTTCTATTCAAAACTGTTGTTATCAGTTTCATTCGCTCTGCTCATTACAGGCTCAACCAGTAATTTAAATTCCTCCACTATTTATATGTTATCCATATTGTATAAGCATTTTCCAATCAGGTAATTACTAAAATTAGGTGCATTTTAAGGAAAACAGCTCCTCTTTACAGAGCACTGTAGTATTCTACTTAAAATCCAAATCAATCACAGTCAATTGAAATGAAGGCAAAAGCAACTTGTTTCCGTGATTTAATGTACACCGAAATGTTCCTTCGTGAATCTTGAAGCAGCCAAACACTCCAGTAACTTATAGTGTTTTTAAGGTGGTATTGTTTTTCTTCTATAATTTGTCTATTATGTTAACGCATCTCCTTCATGAATGATGATCAGGTATTATGGCCTGAATGTGGTTGGCAGGCAGTTTCTTTGACTGATCTTATTACAGCCGCTACTGTTAAAAAGGCTTATAGAAAAGCTACACTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAGCAGAAATATATTGCAGAAAAGGTTTTCGATCTACTAAAGGTATTTGAGTCCTTTCTATACATTTCTTTCTAATGAATACTTTATAAAGAAAGAAATGATTGCCAGTTGAAAATAATGATTAGGCCACTGTTATCTACATGTGGGTTTCCACATAA

Protein sequence

>MS.gene06366.t1

MNDFDRLLATEFGLKPQGKSAPMSSSSSKGSSNFTKTSSLNFDSHSRSFHSSNHDSDLFNSNPISRSTSGFDSMSVNSPVYDKPLYDDDDGSAVAFDDLLGGFGHSKKTVKNERGVGDFDDLINGFGNKSSRQRPTPDIGSSSESTFSASKTTSNATEDPFKIFESASAPTDSSSGHFSDPLEEISKFTSSKSTKNDSSSNSNGAVYDDTDPFDGLGNSVPAFSSERTSRYGTDSPTPWSNTSSGWTRDKESIEKLSVRSPDRRTHNKIPVEHDQEFHQVPYGMPKYSSDSNKPVAGQMPTSPSYFNDGFRPVNSRADMSPKYEEKLASDHDDIWLTVSEIPLFTQPTSAPPPSRPPPPRPVHIPKSEERSSSNHEQQQKEMEDREQRRIERERKEKEREQQRLERERENERQAVERATREARERAAAEARQRAEKAAVEKANAEARVRAERAAVQRAQAEARERAAAEAKKRAEKAAAGEKVREARERAAAARTEAEARVKAERAAVERAAAEARERAAAAARMYQQKNENDLESFFSVRGRANSAPRPPRSNSSDSVFDAQFQPEVNQKPPTVSSNIKRAPSSPNIVDDLSSIFGASPSAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLQTQREQNERHRLAETLDFEVKRWAAGKEGNLRALLSTLQYVLWPECGWQAVSLTDLITAATVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKATVIYMWVST