Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06366.t1 | XP_003602665.1 | 84 | 745 | 93 | 2 | 1 | 741 | 1 | 723 | 5.10E-194 | 688 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06366.t1 | Q9SU08 | 58.8 | 221 | 82 | 3 | 529 | 741 | 673 | 892 | 1.3e-57 | 226.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06366.t1 | G8A1N6 | 84.0 | 745 | 93 | 2 | 1 | 741 | 1 | 723 | 3.6e-194 | 688.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049261 | MS.gene06366 | 0.83001 | 3.74E-55 | -1.69E-46 |
MS.gene050894 | MS.gene06366 | 0.845405 | 4.15E-59 | -1.69E-46 |
MS.gene053218 | MS.gene06366 | 0.80451 | 2.09E-49 | -1.69E-46 |
MS.gene054585 | MS.gene06366 | 0.843016 | 1.82E-58 | -1.69E-46 |
MS.gene058015 | MS.gene06366 | 0.807134 | 5.86E-50 | -1.69E-46 |
MS.gene058550 | MS.gene06366 | 0.811039 | 8.55E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06366.t1 | MTR_3g096790 | 89.812 | 746 | 48 | 3 | 1 | 741 | 1 | 723 | 0.0 | 1065 |
MS.gene06366.t1 | MTR_3g096790 | 92.434 | 608 | 42 | 1 | 138 | 741 | 53 | 660 | 0.0 | 878 |
MS.gene06366.t1 | MTR_8g494210 | 75.654 | 382 | 76 | 4 | 366 | 741 | 531 | 901 | 1.99e-108 | 352 |
MS.gene06366.t1 | MTR_8g494210 | 54.673 | 428 | 128 | 14 | 1 | 367 | 1 | 423 | 1.76e-92 | 309 |
MS.gene06366.t1 | MTR_8g494210 | 53.071 | 407 | 125 | 14 | 1 | 346 | 1 | 402 | 8.53e-92 | 303 |
MS.gene06366.t1 | MTR_8g494210 | 65.272 | 239 | 66 | 4 | 366 | 598 | 531 | 758 | 2.31e-14 | 77.4 |
MS.gene06366.t1 | MTR_8g077150 | 48.058 | 412 | 145 | 12 | 362 | 741 | 1054 | 1428 | 1.96e-77 | 273 |
MS.gene06366.t1 | MTR_8g077150 | 47.816 | 412 | 148 | 12 | 362 | 741 | 1054 | 1430 | 3.71e-76 | 269 |
MS.gene06366.t1 | MTR_3g088495 | 60.000 | 235 | 88 | 3 | 511 | 741 | 277 | 509 | 1.50e-74 | 251 |
MS.gene06366.t1 | MTR_1g022415 | 43.333 | 360 | 135 | 6 | 388 | 741 | 1061 | 1357 | 9.92e-65 | 234 |
MS.gene06366.t1 | MTR_3g088495 | 53.714 | 175 | 75 | 3 | 511 | 681 | 277 | 449 | 1.59e-37 | 147 |
MS.gene06366.t1 | MTR_3g088495 | 53.714 | 175 | 75 | 3 | 511 | 681 | 277 | 449 | 1.96e-37 | 147 |
MS.gene06366.t1 | MTR_8g094000 | 58.865 | 141 | 49 | 2 | 95 | 232 | 67 | 201 | 4.54e-36 | 135 |
MS.gene06366.t1 | MTR_3g111700 | 56.383 | 94 | 41 | 0 | 648 | 741 | 584 | 677 | 1.29e-31 | 132 |
MS.gene06366.t1 | MTR_3g111700 | 56.383 | 94 | 41 | 0 | 648 | 741 | 588 | 681 | 1.35e-31 | 132 |
MS.gene06366.t1 | MTR_2g049770 | 56.977 | 86 | 37 | 0 | 656 | 741 | 357 | 442 | 3.06e-27 | 116 |
MS.gene06366.t1 | MTR_8g079472 | 52.326 | 86 | 41 | 0 | 656 | 741 | 365 | 450 | 5.28e-27 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06366.t1 | AT4G12780 | 56.977 | 344 | 133 | 6 | 412 | 741 | 523 | 865 | 8.79e-84 | 285 |
MS.gene06366.t1 | AT4G12780 | 28.637 | 433 | 149 | 17 | 1 | 356 | 1 | 350 | 2.92e-17 | 87.0 |
MS.gene06366.t1 | AT4G12780 | 56.977 | 344 | 133 | 6 | 412 | 741 | 550 | 892 | 9.17e-84 | 285 |
MS.gene06366.t1 | AT4G12780 | 31.409 | 433 | 164 | 18 | 1 | 356 | 1 | 377 | 2.08e-26 | 116 |
MS.gene06366.t1 | AT4G12770 | 54.627 | 335 | 102 | 7 | 452 | 741 | 548 | 877 | 5.32e-83 | 283 |
MS.gene06366.t1 | AT4G12770 | 31.935 | 429 | 165 | 12 | 1 | 356 | 1 | 375 | 2.34e-34 | 141 |
MS.gene06366.t1 | AT4G12770 | 54.167 | 336 | 104 | 7 | 452 | 741 | 548 | 879 | 5.47e-82 | 280 |
MS.gene06366.t1 | AT4G12770 | 31.935 | 429 | 165 | 12 | 1 | 356 | 1 | 375 | 2.05e-34 | 141 |
MS.gene06366.t1 | AT4G12780 | 54.848 | 361 | 131 | 8 | 412 | 741 | 523 | 882 | 4.78e-80 | 275 |
MS.gene06366.t1 | AT4G12780 | 28.637 | 433 | 149 | 17 | 1 | 356 | 1 | 350 | 3.71e-17 | 86.7 |
MS.gene06366.t1 | AT1G21660 | 53.814 | 236 | 102 | 4 | 506 | 741 | 283 | 511 | 8.09e-72 | 244 |
MS.gene06366.t1 | AT4G36520 | 49.495 | 297 | 83 | 7 | 456 | 741 | 1171 | 1411 | 1.88e-64 | 234 |
MS.gene06366.t1 | AT1G75310 | 40.957 | 376 | 161 | 8 | 368 | 741 | 1124 | 1440 | 2.87e-56 | 209 |
MS.gene06366.t1 | AT1G75310 | 45.118 | 297 | 133 | 6 | 449 | 741 | 1167 | 1437 | 1.76e-52 | 198 |
MS.gene06366.t1 | AT4G12780 | 57.255 | 255 | 92 | 7 | 412 | 651 | 550 | 802 | 1.96e-29 | 125 |
MS.gene06366.t1 | AT4G12780 | 31.409 | 433 | 164 | 18 | 1 | 356 | 1 | 377 | 6.43e-26 | 114 |
MS.gene06366.t1 | AT4G12780 | 57.255 | 255 | 92 | 7 | 412 | 651 | 523 | 775 | 2.12e-29 | 125 |
MS.gene06366.t1 | AT4G12780 | 29.167 | 432 | 148 | 17 | 1 | 356 | 1 | 350 | 9.77e-17 | 85.1 |
MS.gene06366.t1 | AT4G12780 | 57.255 | 255 | 92 | 7 | 412 | 651 | 523 | 775 | 2.12e-29 | 125 |
MS.gene06366.t1 | AT4G12780 | 29.167 | 432 | 148 | 17 | 1 | 356 | 1 | 350 | 9.77e-17 | 85.1 |
MS.gene06366.t1 | AT1G75100 | 46.729 | 107 | 57 | 0 | 635 | 741 | 533 | 639 | 1.34e-27 | 119 |
MS.gene06366.t1 | AT1G30280 | 46.591 | 88 | 45 | 2 | 662 | 747 | 361 | 448 | 8.98e-20 | 93.6 |
MS.gene06366.t1 | AT1G30280 | 46.512 | 86 | 45 | 1 | 662 | 746 | 361 | 446 | 1.26e-19 | 92.8 |
Find 196 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGACACAGTTGGAGGTTTC+TGG | 0.172178 | 3.1:-77156930 | None:intergenic |
TCCCTCAGCTGGAGAATTTC+AGG | 0.198356 | 3.1:+77157128 | MS.gene06366:CDS |
CCCTTCTGCTGCACTTTATC+AGG | 0.215143 | 3.1:-77158747 | None:intergenic |
TACAGCCGCTACTGTTAAAA+AGG | 0.236113 | 3.1:+77158695 | MS.gene06366:CDS |
CAGCAGCTGCAGCTCTTTCT+CGG | 0.239034 | 3.1:-77156192 | None:intergenic |
TTGTTATGTGTTCGTCTATC+AGG | 0.263486 | 3.1:-77155428 | None:intergenic |
GAAAGATCATCAACAATATT+AGG | 0.291136 | 3.1:-77156979 | None:intergenic |
AATTTACTAATCTCTTCTAA+TGG | 0.298569 | 3.1:-77155188 | None:intergenic |
CAGCAGCCTTCTCAGCTCTT+TGG | 0.302766 | 3.1:-77155940 | None:intergenic |
GATGATTTGATCAATGGATT+TGG | 0.304715 | 3.1:+77153343 | MS.gene06366:CDS |
TGAATGATGATCAGGTATTA+TGG | 0.312370 | 3.1:+77158631 | MS.gene06366:intron |
CCTCAGATCATGACGATATA+TGG | 0.313995 | 3.1:+77155630 | MS.gene06366:CDS |
CCTCAGCAGCAGCCCTTTCA+CGG | 0.316110 | 3.1:-77156033 | None:intergenic |
AGCAGCTGCAGCTCTTTCTC+GGG | 0.328646 | 3.1:-77156191 | None:intergenic |
TTAGAATCAGATGAATATTT+AGG | 0.329043 | 3.1:-77155500 | None:intergenic |
TTCAATTGATTCTTTATCTC+TGG | 0.335760 | 3.1:-77155387 | None:intergenic |
CACAGGCCCACTCCTGATAT+TGG | 0.347676 | 3.1:+77155044 | MS.gene06366:intron |
CGTTTATTAGCTACTGAATT+CGG | 0.353480 | 3.1:+77153001 | MS.gene06366:CDS |
ATTTACTAATCTCTTCTAAT+GGG | 0.371043 | 3.1:-77155187 | None:intergenic |
TTGTGTTTGACCACGGTGTT+GGG | 0.371244 | 3.1:-77155352 | None:intergenic |
ATGATTTGATCAATGGATTT+GGG | 0.374205 | 3.1:+77153344 | MS.gene06366:CDS |
GCAGAAATATATTGCAGAAA+AGG | 0.382951 | 3.1:+77158782 | MS.gene06366:CDS |
GGTGAAATTGGAAGATCCTT+TGG | 0.383015 | 3.1:-77153068 | None:intergenic |
AGGAGGCCTTGGAGCGCTAT+TGG | 0.387575 | 3.1:-77156278 | None:intergenic |
GATGATCTTCTCGGCGGATT+CGG | 0.391097 | 3.1:+77153274 | MS.gene06366:CDS |
TAAAGAGGTTTATCATAAAC+AGG | 0.396140 | 3.1:-77153220 | None:intergenic |
TCTGATGATGAACCAATATC+AGG | 0.396642 | 3.1:-77155056 | None:intergenic |
CTCAGCAGCAGCCCTTTCAC+GGG | 0.403036 | 3.1:-77156032 | None:intergenic |
AACTCCTGATCATGTTCAAC+AGG | 0.404831 | 3.1:-77155455 | None:intergenic |
GAAGTTAAGCGCTGGGCTGC+AGG | 0.405772 | 3.1:+77158027 | MS.gene06366:CDS |
GAGTTAGACCTAGGAGGCCT+TGG | 0.407343 | 3.1:-77156289 | None:intergenic |
GAAGTTGAGAGAGGAAGTTT+TGG | 0.413068 | 3.1:-77153089 | None:intergenic |
CGCTGGGCTGCAGGGAAAGA+GGG | 0.414763 | 3.1:+77158036 | MS.gene06366:CDS |
GGAGGTTTCTGGTTTACCTC+TGG | 0.418586 | 3.1:-77156919 | None:intergenic |
CCTCTGAAGGCGTTCCAATC+TGG | 0.418587 | 3.1:-77157184 | None:intergenic |
CTGCTTCTCTCCTCTGACTT+GGG | 0.419390 | 3.1:-77155740 | None:intergenic |
AGGGTCTTCTGTTGCATTGG+AGG | 0.419847 | 3.1:-77155105 | None:intergenic |
CGAGGAGGAGGTGGTCTTGA+AGG | 0.420028 | 3.1:-77155704 | None:intergenic |
ACTGCCTGCCAACCACATTC+AGG | 0.420484 | 3.1:-77158654 | None:intergenic |
AGCTAGAGTGCGTGCTGAAA+GGG | 0.423395 | 3.1:+77155982 | MS.gene06366:CDS |
GTTGCGTTTGATGATCTTCT+CGG | 0.423406 | 3.1:+77153265 | MS.gene06366:CDS |
GCGCTGGGCTGCAGGGAAAG+AGG | 0.430219 | 3.1:+77158035 | MS.gene06366:CDS |
CTCAGTAACCACACCTTTGA+CGG | 0.433699 | 3.1:-77153378 | None:intergenic |
GATAGTTCATCAAATTCTAA+TGG | 0.437018 | 3.1:+77155236 | MS.gene06366:CDS |
ACTGCTTCTCTCCTCTGACT+TGG | 0.437860 | 3.1:-77155741 | None:intergenic |
CCGTCATCGTCGTCGTAAAG+AGG | 0.439814 | 3.1:-77153235 | None:intergenic |
TGACCACGGTGTTGGGGAAT+CGG | 0.440553 | 3.1:-77155345 | None:intergenic |
CTGAAAGGGCCGCTGTTCAG+AGG | 0.442095 | 3.1:+77155996 | MS.gene06366:CDS |
CTGCTGCTGAGGCAAAGAAA+AGG | 0.445504 | 3.1:+77156044 | MS.gene06366:CDS |
AAGAAGGGGAAGTAGGCATT+TGG | 0.450918 | 3.1:-77155538 | None:intergenic |
AGGGCTGAAAAGGCTGCTGC+AGG | 0.454335 | 3.1:+77156064 | MS.gene06366:CDS |
AAACCATCATTAAAATAAGA+AGG | 0.455056 | 3.1:-77155554 | None:intergenic |
AAGAATTGAAAGGGAAAGGA+AGG | 0.455730 | 3.1:+77155811 | MS.gene06366:CDS |
GATTCCTGTTGAACATGATC+AGG | 0.457157 | 3.1:+77155451 | MS.gene06366:CDS |
TGTGGAAAGGGCTGCTGCAG+AGG | 0.458750 | 3.1:+77156168 | MS.gene06366:CDS |
CGTTCTTCAGCGTGAGGGGA+CGG | 0.458812 | 3.1:+77156254 | MS.gene06366:CDS |
GTAGGCATTTGGCCAGCTAC+TGG | 0.464119 | 3.1:-77155527 | None:intergenic |
TCAGAGAGGACTAGCAGATA+TGG | 0.464943 | 3.1:+77155320 | MS.gene06366:CDS |
AAAAGGGTCTTCTGTTGCAT+TGG | 0.465313 | 3.1:-77155108 | None:intergenic |
GAAGAGATCGGAATCATGAT+TGG | 0.465418 | 3.1:-77153140 | None:intergenic |
AAAGGCTGCTGCAGGGGAAA+AGG | 0.465673 | 3.1:+77156072 | MS.gene06366:CDS |
ACCGGAGGTGCTACGAGAGA+TGG | 0.465933 | 3.1:-77153173 | None:intergenic |
TTTGGCCACAAATTCTTATG+TGG | 0.466052 | 3.1:-77158930 | None:intergenic |
GAGAGCAAAGAAGAATTGAA+AGG | 0.467658 | 3.1:+77155801 | MS.gene06366:CDS |
ATAGCGCTCCAAGGCCTCCT+AGG | 0.469434 | 3.1:+77156281 | MS.gene06366:CDS |
CACAAGCTGAAGCCCGTGAA+AGG | 0.469852 | 3.1:+77156020 | MS.gene06366:CDS |
GGCAAAGAAAAGGGCTGAAA+AGG | 0.470382 | 3.1:+77156054 | MS.gene06366:CDS |
CCGTGAAAGGGCTGCTGCTG+AGG | 0.470897 | 3.1:+77156033 | MS.gene06366:CDS |
ATCATAAACAGGCGAGTTGA+CGG | 0.471295 | 3.1:-77153209 | None:intergenic |
CCGTGGTCAAACACAAGTTC+AGG | 0.471860 | 3.1:+77155359 | MS.gene06366:CDS |
GGAGAATTTCAGGAGGTTGA+AGG | 0.473553 | 3.1:+77157138 | MS.gene06366:CDS |
TCCAAAATATGAAGAAAAGT+TGG | 0.477629 | 3.1:+77155607 | MS.gene06366:CDS |
GCTCCAACTGATTCATCCTC+AGG | 0.479394 | 3.1:+77155152 | MS.gene06366:CDS |
ATATGTACTGGTCGAGGAGG+AGG | 0.482183 | 3.1:-77155716 | None:intergenic |
GGAAAGAGAAAATGAAAGAC+AGG | 0.482527 | 3.1:+77155865 | MS.gene06366:CDS |
TTAAAATAAGAAGGGGAAGT+AGG | 0.484614 | 3.1:-77155545 | None:intergenic |
AAGCTAGAGTGCGTGCTGAA+AGG | 0.485213 | 3.1:+77155981 | MS.gene06366:CDS |
AGAGCAAAGAAGAATTGAAA+GGG | 0.486134 | 3.1:+77155802 | MS.gene06366:CDS |
CCCATCTCTCGTAGCACCTC+CGG | 0.486573 | 3.1:+77153172 | MS.gene06366:CDS |
AGAAAGGCGAAAAGCCAGAT+TGG | 0.487061 | 3.1:+77157170 | MS.gene06366:CDS |
CTTGTGTTTGACCACGGTGT+TGG | 0.489404 | 3.1:-77155353 | None:intergenic |
AAAGAAGAATTGAAAGGGAA+AGG | 0.494666 | 3.1:+77155807 | MS.gene06366:CDS |
GTTCTTCAGCGTGAGGGGAC+GGG | 0.495306 | 3.1:+77156255 | MS.gene06366:CDS |
GAGAACAACAGAGACTTGAG+AGG | 0.495826 | 3.1:+77155843 | MS.gene06366:CDS |
CTTAGTACATACATATTGTA+AGG | 0.496733 | 3.1:-77158082 | None:intergenic |
GACGGACATGGAATCGAAAC+CGG | 0.497502 | 3.1:-77153191 | None:intergenic |
CGCGCTCCTGAGCCCTCTGA+AGG | 0.498449 | 3.1:-77157197 | None:intergenic |
AGAAAATGAAAGACAGGCTG+TGG | 0.501628 | 3.1:+77155871 | MS.gene06366:CDS |
ATTGGAAGAGTGAAAGGATC+GGG | 0.502219 | 3.1:-77153122 | None:intergenic |
GGGATTAGAATTGAAGAGAT+CGG | 0.502447 | 3.1:-77153152 | None:intergenic |
GAGAATTTCAGGAGGTTGAA+GGG | 0.504840 | 3.1:+77157139 | MS.gene06366:CDS |
CATATCTGCCCGAGAATTGA+CGG | 0.506680 | 3.1:-77155582 | None:intergenic |
GAGTTTCATCAAGTGCCATA+TGG | 0.509261 | 3.1:+77155473 | MS.gene06366:CDS |
AAACCATGAGCAGCAGCAAA+AGG | 0.509397 | 3.1:+77155766 | MS.gene06366:CDS |
AACCATCATTAAAATAAGAA+GGG | 0.510911 | 3.1:-77155553 | None:intergenic |
TTTGAAGCATCTCCCTCAGC+TGG | 0.511972 | 3.1:+77157117 | MS.gene06366:intron |
TGCTGCTGAGGCAAAGAAAA+GGG | 0.513805 | 3.1:+77156045 | MS.gene06366:CDS |
TCAACAATATTAGGTGATGA+TGG | 0.515248 | 3.1:-77156970 | None:intergenic |
CCGGAGGTGCTACGAGAGAT+GGG | 0.515653 | 3.1:-77153172 | None:intergenic |
TTTATGTTTGAAGACACAGT+TGG | 0.520718 | 3.1:-77156940 | None:intergenic |
ACAAGCTGAAGCCCGTGAAA+GGG | 0.521348 | 3.1:+77156021 | MS.gene06366:CDS |
TGGACTTTGAAGTTAAGCGC+TGG | 0.522927 | 3.1:+77158019 | MS.gene06366:CDS |
CTGTGTCTTCAAACATAAAG+AGG | 0.524678 | 3.1:+77156944 | MS.gene06366:CDS |
TCTGCTCTCTTTGAGTCTGT+AGG | 0.527874 | 3.1:-77157664 | None:intergenic |
TCTGACTTGGGAATATGTAC+TGG | 0.528885 | 3.1:-77155728 | None:intergenic |
GAATATTTAGGCATGCCATA+TGG | 0.529615 | 3.1:-77155488 | None:intergenic |
GGACTTTGAAGTTAAGCGCT+GGG | 0.530794 | 3.1:+77158020 | MS.gene06366:CDS |
CTTCTAATGGGTCTGAAAAG+TGG | 0.534760 | 3.1:-77155175 | None:intergenic |
TTTATACTAGGCAAAGGCAT+TGG | 0.535677 | 3.1:+77157622 | MS.gene06366:intron |
TCAGAGGCTTGCGGAAACAC+TGG | 0.536353 | 3.1:+77157999 | MS.gene06366:intron |
CAGAACGTGCTGCTGTGGAA+AGG | 0.537152 | 3.1:+77156155 | MS.gene06366:CDS |
GAATCGTTCTTCAGCGTGAG+GGG | 0.539328 | 3.1:+77156250 | MS.gene06366:CDS |
GAATTTCCAAGTCCATCAAA+AGG | 0.540071 | 3.1:-77155281 | None:intergenic |
GGCTGAAAAGGCTGCTGCAG+GGG | 0.540322 | 3.1:+77156066 | MS.gene06366:CDS |
ATCATGATTGGAAGAGTGAA+AGG | 0.543443 | 3.1:-77153128 | None:intergenic |
ATGGCCTGAATGTGGTTGGC+AGG | 0.545019 | 3.1:+77158650 | MS.gene06366:CDS |
TTGAAGGGGAAAGTGAAGAA+AGG | 0.545134 | 3.1:+77157154 | MS.gene06366:CDS |
AGAACGTGCTGCTGTGGAAA+GGG | 0.545428 | 3.1:+77156156 | MS.gene06366:CDS |
ATTGGCTGAGAAGAATCAAC+GGG | 0.546286 | 3.1:+77157640 | MS.gene06366:CDS |
GGAACGCCTTCAGAGGGCTC+AGG | 0.554110 | 3.1:+77157191 | MS.gene06366:CDS |
AGGCCACTGTTATCTACATG+TGG | 0.555363 | 3.1:+77158903 | MS.gene06366:intron |
ATGTTTGAAGACACAGTTGG+AGG | 0.555500 | 3.1:-77156937 | None:intergenic |
GATTCTAATAAACCAGTAGC+TGG | 0.557003 | 3.1:+77155515 | MS.gene06366:CDS |
AGCTCGCCAAAGAGCTGAGA+AGG | 0.557004 | 3.1:+77155934 | MS.gene06366:CDS |
GAAGGTGGTGGAGCAGAAGT+TGG | 0.558690 | 3.1:-77155686 | None:intergenic |
AAGTTAAGCGCTGGGCTGCA+GGG | 0.559252 | 3.1:+77158028 | MS.gene06366:CDS |
GGGCTGAAAAGGCTGCTGCA+GGG | 0.559351 | 3.1:+77156065 | MS.gene06366:CDS |
TCCTGATAAAGTGCAGCAGA+AGG | 0.559973 | 3.1:+77158746 | MS.gene06366:CDS |
GGAACAAGTCCTCCCGTCAA+AGG | 0.560199 | 3.1:+77153365 | MS.gene06366:CDS |
ATTCGGTCATTCGAAGAAAA+CGG | 0.561173 | 3.1:+77153291 | MS.gene06366:CDS |
TGTACTGGTCGAGGAGGAGG+TGG | 0.561547 | 3.1:-77155713 | None:intergenic |
TCAGTAACCACACCTTTGAC+GGG | 0.564015 | 3.1:-77153377 | None:intergenic |
TCCTGAAATTCTCCAGCTGA+GGG | 0.565222 | 3.1:-77157129 | None:intergenic |
CCTCTTTACGACGACGATGA+CGG | 0.565572 | 3.1:+77153235 | MS.gene06366:CDS |
TAAAGCAGAACGTGCTGCTG+TGG | 0.566166 | 3.1:+77156150 | MS.gene06366:CDS |
TGGCCTGAGGATGAATCAGT+TGG | 0.568887 | 3.1:-77155155 | None:intergenic |
TGAGCAGCAGCAAAAGGAGA+TGG | 0.568955 | 3.1:+77155772 | MS.gene06366:CDS |
TGAAAGGGCCGCTGTTCAGA+GGG | 0.569740 | 3.1:+77155997 | MS.gene06366:CDS |
ATGTGAATCGAAGTTGAGAG+AGG | 0.572513 | 3.1:-77153098 | None:intergenic |
CTCCTGAAATTCTCCAGCTG+AGG | 0.572662 | 3.1:-77157130 | None:intergenic |
AACAGGCGAGTTGACGGACA+TGG | 0.572944 | 3.1:-77153203 | None:intergenic |
TGAATCGTTCTTCAGCGTGA+GGG | 0.573586 | 3.1:+77156249 | MS.gene06366:CDS |
GCTGGGCTGCAGGGAAAGAG+GGG | 0.574702 | 3.1:+77158037 | MS.gene06366:CDS |
CCAGATTGGAACGCCTTCAG+AGG | 0.574933 | 3.1:+77157184 | MS.gene06366:CDS |
ATATCTGCCCGAGAATTGAC+GGG | 0.576043 | 3.1:-77155581 | None:intergenic |
GTCCTCTCTGATGAAAATGC+TGG | 0.577003 | 3.1:-77155308 | None:intergenic |
GATTGGAAGAGTGAAAGGAT+CGG | 0.577344 | 3.1:-77153123 | None:intergenic |
GAGAAAGAGCTGCAGCTGCA+AGG | 0.578548 | 3.1:+77156107 | MS.gene06366:CDS |
GGAGGTGGTCTTGAAGGTGG+TGG | 0.579037 | 3.1:-77155698 | None:intergenic |
GTGAAGAATGAGAGAGGTGT+CGG | 0.580582 | 3.1:+77153313 | MS.gene06366:CDS |
GGAGGAGGTGGTCTTGAAGG+TGG | 0.581949 | 3.1:-77155701 | None:intergenic |
TGATGCACAATTTCAGCCAG+AGG | 0.589144 | 3.1:+77156903 | MS.gene06366:CDS |
CCATATATCGTCATGATCTG+AGG | 0.593418 | 3.1:-77155630 | None:intergenic |
TTGAATCGTTCTTCAGCGTG+AGG | 0.593892 | 3.1:+77156248 | MS.gene06366:CDS |
GACGGGCCAATAGCGCTCCA+AGG | 0.596506 | 3.1:+77156272 | MS.gene06366:CDS |
ACCATCATTAAAATAAGAAG+GGG | 0.596875 | 3.1:-77155552 | None:intergenic |
TTGGGAATATGTACTGGTCG+AGG | 0.596893 | 3.1:-77155722 | None:intergenic |
GGCCACTGTTATCTACATGT+GGG | 0.602583 | 3.1:+77158904 | MS.gene06366:intron |
AAAACGGTGAAGAATGAGAG+AGG | 0.603787 | 3.1:+77153307 | MS.gene06366:CDS |
CAGATTGGAACGCCTTCAGA+GGG | 0.608050 | 3.1:+77157185 | MS.gene06366:CDS |
ATTGGTGCAGATTTGCCTTG+AGG | 0.610923 | 3.1:-77153031 | None:intergenic |
AGAATTTCAGGAGGTTGAAG+GGG | 0.612114 | 3.1:+77157140 | MS.gene06366:CDS |
AATATATTTCTGCTGAAGAG+TGG | 0.620107 | 3.1:-77158772 | None:intergenic |
CATTGGCTGAGAAGAATCAA+CGG | 0.622100 | 3.1:+77157639 | MS.gene06366:CDS |
GATGAACCAATATCAGGAGT+GGG | 0.623236 | 3.1:-77155050 | None:intergenic |
TTGGATGATGATGATGACAT+TGG | 0.623868 | 3.1:-77153049 | None:intergenic |
TCATGACGATATATGGCTAA+CGG | 0.623870 | 3.1:+77155637 | MS.gene06366:CDS |
CCTGATAAAGTGCAGCAGAA+GGG | 0.624350 | 3.1:+77158747 | MS.gene06366:CDS |
GAATTCGGTTTGAAACCTCA+AGG | 0.625188 | 3.1:+77153016 | MS.gene06366:CDS |
TCAGAGGGCTCAGGAGCGCG+CGG | 0.626791 | 3.1:+77157200 | MS.gene06366:CDS |
TGATGAACCAATATCAGGAG+TGG | 0.633810 | 3.1:-77155051 | None:intergenic |
CTCACAGAAGAGTTAGACCT+AGG | 0.635511 | 3.1:-77156298 | None:intergenic |
CTCAGCTGGAGAATTTCAGG+AGG | 0.637505 | 3.1:+77157131 | MS.gene06366:CDS |
TGAGGATGAATCAGTTGGAG+CGG | 0.639821 | 3.1:-77155150 | None:intergenic |
ATGTCATCATCATCATCCAA+AGG | 0.640651 | 3.1:+77153052 | MS.gene06366:CDS |
GGTCAAACACAAGTTCAGGT+TGG | 0.644850 | 3.1:+77155363 | MS.gene06366:CDS |
GCAGCAGCAAAAGGAGATGG+AGG | 0.644915 | 3.1:+77155775 | MS.gene06366:CDS |
TATTATGGCCTGAATGTGGT+TGG | 0.649392 | 3.1:+77158646 | MS.gene06366:CDS |
AGCTTGTGCCCTCTGAACAG+CGG | 0.653667 | 3.1:-77156005 | None:intergenic |
AGAACAACAGAGACTTGAGA+GGG | 0.653891 | 3.1:+77155844 | MS.gene06366:CDS |
TGTGTTTGACCACGGTGTTG+GGG | 0.654993 | 3.1:-77155351 | None:intergenic |
TGTGTCTTCAAACATAAAGA+GGG | 0.655665 | 3.1:+77156945 | MS.gene06366:CDS |
GAGAAGATCATCAAACGCAA+CGG | 0.656158 | 3.1:-77153263 | None:intergenic |
ACATTGATTTCAGAGGCTTG+CGG | 0.656214 | 3.1:+77157990 | MS.gene06366:intron |
AGTACATATTCCCAAGTCAG+AGG | 0.661965 | 3.1:+77155730 | MS.gene06366:CDS |
ACAGAAGAGTTAGACCTAGG+AGG | 0.662653 | 3.1:-77156295 | None:intergenic |
CCTGAACTTGTGTTTGACCA+CGG | 0.670451 | 3.1:-77155359 | None:intergenic |
GGAATATGTACTGGTCGAGG+AGG | 0.673478 | 3.1:-77155719 | None:intergenic |
GTAACCACACCTTTGACGGG+AGG | 0.676329 | 3.1:-77153374 | None:intergenic |
CAGGTATTATGGCCTGAATG+TGG | 0.679133 | 3.1:+77158642 | MS.gene06366:intron |
AGTACATACATATTGTAAGG+TGG | 0.690241 | 3.1:-77158079 | None:intergenic |
TGGGTCTGAAAAGTGGCCTG+AGG | 0.703931 | 3.1:-77155168 | None:intergenic |
GCGTTTGATGATCTTCTCGG+CGG | 0.720705 | 3.1:+77153268 | MS.gene06366:CDS |
GGACATGGAATCGAAACCGG+AGG | 0.725329 | 3.1:-77153188 | None:intergenic |
AACCCACATGTAGATAACAG+TGG | 0.744734 | 3.1:-77158906 | None:intergenic |
GCACCGATTCCCCAACACCG+TGG | 0.760752 | 3.1:+77155342 | MS.gene06366:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAGAGTTTTAAATAAAAA+AGG | + | chr3.1:77156743-77156762 | MS.gene06366:intron | 10.0% |
!!! | AAAGAGTTTTAAATAAAAAA+GGG | + | chr3.1:77156744-77156763 | MS.gene06366:intron | 10.0% |
!!! | AAATGTAATTAATTTTGTAT+AGG | - | chr3.1:77156639-77156658 | None:intergenic | 10.0% |
!! | AAACATTATTTATACTAAAG+CGG | + | chr3.1:77156335-77156354 | MS.gene06366:intron | 15.0% |
!! | AAATAACATTAATGTTTCAT+TGG | - | chr3.1:77156505-77156524 | None:intergenic | 15.0% |
!! | ATATAATAATAGATAGCATA+AGG | - | chr3.1:77158136-77158155 | None:intergenic | 15.0% |
!! | CATTAATAATAAAAATGATG+GGG | - | chr3.1:77156391-77156410 | None:intergenic | 15.0% |
!! | GAAAGAATATTAAAAAAATC+TGG | - | chr3.1:77158182-77158201 | None:intergenic | 15.0% |
!! | GCATTAATAATAAAAATGAT+GGG | - | chr3.1:77156392-77156411 | None:intergenic | 15.0% |
!! | TGCATTAATAATAAAAATGA+TGG | - | chr3.1:77156393-77156412 | None:intergenic | 15.0% |
!! | TTAAGTTTAAACACAATTAT+CGG | - | chr3.1:77153848-77153867 | None:intergenic | 15.0% |
!!! | AAACTCTTTTAAAATAAAAG+TGG | - | chr3.1:77156733-77156752 | None:intergenic | 15.0% |
!!! | AAATGACAATTTAAAATTTG+AGG | - | chr3.1:77153902-77153921 | None:intergenic | 15.0% |
!!! | ATCATTTTTATTATTAATGC+AGG | + | chr3.1:77156392-77156411 | MS.gene06366:intron | 15.0% |
!!! | CTGATTCAAATATTTTAAAA+GGG | - | chr3.1:77155127-77155146 | None:intergenic | 15.0% |
!!! | TTTAGTTCAAAATTGTAAAT+TGG | - | chr3.1:77157311-77157330 | None:intergenic | 15.0% |
!!! | TTTTTCTTTTTAACAACTAA+TGG | - | chr3.1:77157471-77157490 | None:intergenic | 15.0% |
!! | AAACCATCATTAAAATAAGA+AGG | - | chr3.1:77155557-77155576 | None:intergenic | 20.0% |
!! | AAATAATGTTTATCAAGACA+TGG | - | chr3.1:77156326-77156345 | None:intergenic | 20.0% |
!! | AACCATCATTAAAATAAGAA+GGG | - | chr3.1:77155556-77155575 | None:intergenic | 20.0% |
!! | AACTAATACGTGAAAAATAA+GGG | - | chr3.1:77154978-77154997 | None:intergenic | 20.0% |
!! | AAGAGAGTAATAAATAGTTA+AGG | - | chr3.1:77156540-77156559 | None:intergenic | 20.0% |
!! | AATTTACTAATCTCTTCTAA+TGG | - | chr3.1:77155191-77155210 | None:intergenic | 20.0% |
!! | ACAAAATTGTCCTTAATAAA+TGG | - | chr3.1:77156593-77156612 | None:intergenic | 20.0% |
!! | AGAGAGTAATAAATAGTTAA+GGG | - | chr3.1:77156539-77156558 | None:intergenic | 20.0% |
!! | AGATTTGAATTGAAATCTTA+TGG | + | chr3.1:77154869-77154888 | MS.gene06366:intron | 20.0% |
!! | ATCAGGTAATTACTAAAATT+AGG | + | chr3.1:77158370-77158389 | MS.gene06366:intron | 20.0% |
!! | ATTTACTAATCTCTTCTAAT+GGG | - | chr3.1:77155190-77155209 | None:intergenic | 20.0% |
!! | TAAGTTTAAACACAATTATC+GGG | - | chr3.1:77153847-77153866 | None:intergenic | 20.0% |
!! | TAATTGTGTTTAAACTTAAG+TGG | + | chr3.1:77153849-77153868 | MS.gene06366:intron | 20.0% |
!! | TATGGATAACATATAAATAG+TGG | - | chr3.1:77158332-77158351 | None:intergenic | 20.0% |
!! | TATTCAAGGATAAAAGAATA+TGG | - | chr3.1:77153984-77154003 | None:intergenic | 20.0% |
!! | TTAAAAACACTATAAGTTAC+TGG | - | chr3.1:77158557-77158576 | None:intergenic | 20.0% |
!! | TTAGAAAGAAATGTATAGAA+AGG | - | chr3.1:77158835-77158854 | None:intergenic | 20.0% |
!! | TTAGAATCAGATGAATATTT+AGG | - | chr3.1:77155503-77155522 | None:intergenic | 20.0% |
!! | TTGAATGTAATCATATTTGT+TGG | + | chr3.1:77153657-77153676 | MS.gene06366:intron | 20.0% |
!!! | AATTTTAGTAATTACCTGAT+TGG | - | chr3.1:77158370-77158389 | None:intergenic | 20.0% |
!!! | AGTAACTTATAGTGTTTTTA+AGG | + | chr3.1:77158556-77158575 | MS.gene06366:intron | 20.0% |
!!! | AGTGCATTTTAGAATAATAA+CGG | + | chr3.1:77153821-77153840 | MS.gene06366:intron | 20.0% |
!!! | ATATATTTTGAACATGCAAT+GGG | - | chr3.1:77157772-77157791 | None:intergenic | 20.0% |
!!! | CGTTTTAAATGTTAAAAGTT+TGG | + | chr3.1:77156802-77156821 | MS.gene06366:intron | 20.0% |
!!! | GCTGATTCAAATATTTTAAA+AGG | - | chr3.1:77155128-77155147 | None:intergenic | 20.0% |
!!! | TAAATAGTTAAGGGTATAAT+AGG | - | chr3.1:77156530-77156549 | None:intergenic | 20.0% |
!!! | TATATATTTTGAACATGCAA+TGG | - | chr3.1:77157773-77157792 | None:intergenic | 20.0% |
!!! | TATTCTTTTATCCTTGAATA+TGG | + | chr3.1:77153984-77154003 | MS.gene06366:intron | 20.0% |
!!! | TCAGTGATTTAATTTTTGAA+CGG | + | chr3.1:77154558-77154577 | MS.gene06366:intron | 20.0% |
!!! | TGAAAGAGATAGTTTTTTAT+AGG | - | chr3.1:77157810-77157829 | None:intergenic | 20.0% |
!!! | TTGTTATTGATAGTAAAAGA+AGG | + | chr3.1:77157262-77157281 | MS.gene06366:intron | 20.0% |
!!! | TTTCTTTAAAAAAATGCTTG+AGG | + | chr3.1:77158156-77158175 | MS.gene06366:intron | 20.0% |
! | AAATGTTCCTATTTGACTAA+AGG | - | chr3.1:77154616-77154635 | None:intergenic | 25.0% |
! | AACTGAAAGAAAGAAAGAAA+TGG | - | chr3.1:77157506-77157525 | None:intergenic | 25.0% |
! | AATCATCCAACATAAAGATT+AGG | - | chr3.1:77157879-77157898 | None:intergenic | 25.0% |
! | AATGTTCCTATTTGACTAAA+GGG | - | chr3.1:77154615-77154634 | None:intergenic | 25.0% |
! | ACCATCATTAAAATAAGAAG+GGG | - | chr3.1:77155555-77155574 | None:intergenic | 25.0% |
! | AGTAGATCTTTCAAGAATAT+GGG | + | chr3.1:77154323-77154342 | MS.gene06366:intron | 25.0% |
! | ATATGTATGTACTAAGTACT+TGG | + | chr3.1:77158089-77158108 | MS.gene06366:intron | 25.0% |
! | ATTGTCCTTAATAAATGGTA+TGG | - | chr3.1:77156588-77156607 | None:intergenic | 25.0% |
! | CAACTAATACGTGAAAAATA+AGG | - | chr3.1:77154979-77154998 | None:intergenic | 25.0% |
! | CAATAACTTTCTTATTCCAT+AGG | - | chr3.1:77154822-77154841 | None:intergenic | 25.0% |
! | CTTAGTACATACATATTGTA+AGG | - | chr3.1:77158085-77158104 | None:intergenic | 25.0% |
! | CTTCAAACCATAAAAGAAAA+GGG | - | chr3.1:77157104-77157123 | None:intergenic | 25.0% |
! | CTTCTTAAATAAAAATGCAC+AGG | - | chr3.1:77154762-77154781 | None:intergenic | 25.0% |
! | GAAAGATCATCAACAATATT+AGG | - | chr3.1:77156982-77157001 | None:intergenic | 25.0% |
! | GATAGTTCATCAAATTCTAA+TGG | + | chr3.1:77155236-77155255 | MS.gene06366:CDS | 25.0% |
! | GGAATAAGAATAATCGAAAA+GGG | + | chr3.1:77154942-77154961 | MS.gene06366:intron | 25.0% |
! | TAAAGAGGTTTATCATAAAC+AGG | - | chr3.1:77153223-77153242 | None:intergenic | 25.0% |
! | TAGACAACTGAAATAAATCT+TGG | + | chr3.1:77154491-77154510 | MS.gene06366:intron | 25.0% |
! | TAGTAGATCTTTCAAGAATA+TGG | + | chr3.1:77154322-77154341 | MS.gene06366:intron | 25.0% |
! | TCCAAAACGTCATATAATTT+GGG | + | chr3.1:77156677-77156696 | MS.gene06366:intron | 25.0% |
! | TCCAAAATATGAAGAAAAGT+TGG | + | chr3.1:77155607-77155626 | MS.gene06366:CDS | 25.0% |
! | TGGAAAATGCTTATACAATA+TGG | - | chr3.1:77158350-77158369 | None:intergenic | 25.0% |
! | TGTAAAGCGACTTATAATTT+GGG | - | chr3.1:77156479-77156498 | None:intergenic | 25.0% |
! | TTAACAAACATGAAGAGAAT+GGG | + | chr3.1:77154921-77154940 | MS.gene06366:intron | 25.0% |
! | TTATCTGGTAGCTTATAAAA+CGG | + | chr3.1:77154795-77154814 | MS.gene06366:intron | 25.0% |
! | TTGTAAAGCGACTTATAATT+TGG | - | chr3.1:77156480-77156499 | None:intergenic | 25.0% |
! | TTGTCCTTAATAAATGGTAT+GGG | - | chr3.1:77156587-77156606 | None:intergenic | 25.0% |
! | TTTAACAAACATGAAGAGAA+TGG | + | chr3.1:77154920-77154939 | MS.gene06366:intron | 25.0% |
! | TTTGATATCTTGAAAGTGAA+AGG | + | chr3.1:77157410-77157429 | MS.gene06366:intron | 25.0% |
!! | AAAAGCTTTTGGTGAAATAT+TGG | + | chr3.1:77153772-77153791 | MS.gene06366:intron | 25.0% |
!! | AACCATTACCTTTTTATACT+AGG | + | chr3.1:77157610-77157629 | MS.gene06366:intron | 25.0% |
!! | ATGATTTGATCAATGGATTT+GGG | + | chr3.1:77153344-77153363 | MS.gene06366:CDS | 25.0% |
!! | CTAAAATTAGGTGCATTTTA+AGG | + | chr3.1:77158382-77158401 | MS.gene06366:intron | 25.0% |
!! | CTTTTTGCTTATCATGTATT+TGG | + | chr3.1:77154250-77154269 | MS.gene06366:intron | 25.0% |
!! | TTCAATTGATTCTTTATCTC+TGG | - | chr3.1:77155390-77155409 | None:intergenic | 25.0% |
!! | TTTTCAATTCTTACAAGTGT+CGG | - | chr3.1:77153627-77153646 | None:intergenic | 25.0% |
!!! | AACTTATAGTGTTTTTAAGG+TGG | + | chr3.1:77158559-77158578 | MS.gene06366:intron | 25.0% |
!!! | AGTGGATTTATCATTTTATC+TGG | + | chr3.1:77154780-77154799 | MS.gene06366:intron | 25.0% |
!!! | AGTGTTTTGTTTATAGCTTA+AGG | + | chr3.1:77154697-77154716 | MS.gene06366:intron | 25.0% |
!!! | CATGTTTTATTATATAGTGC+AGG | - | chr3.1:77154025-77154044 | None:intergenic | 25.0% |
!!! | CTTTTCTTTTTATTTGTGAC+CGG | + | chr3.1:77157717-77157736 | MS.gene06366:intron | 25.0% |
!!! | GATCATTTTCATTTTTTTGC+TGG | - | chr3.1:77156228-77156247 | None:intergenic | 25.0% |
!!! | GATTTTGATGATTTGATCAA+TGG | + | chr3.1:77153337-77153356 | MS.gene06366:CDS | 25.0% |
!!! | GTGCATTTTTATTTAAGAAG+TGG | + | chr3.1:77154762-77154781 | MS.gene06366:intron | 25.0% |
!!! | GTGTTTTGTTTATAGCTTAA+GGG | + | chr3.1:77154698-77154717 | MS.gene06366:intron | 25.0% |
!!! | TTTTCTTTTTATTTGTGACC+GGG | + | chr3.1:77157718-77157737 | MS.gene06366:intron | 25.0% |
!!! | TTTTTGAATTGGTTCATCAT+TGG | + | chr3.1:77154583-77154602 | MS.gene06366:intron | 25.0% |
AAACCATAAAAGAAAAGGGA+TGG | - | chr3.1:77157100-77157119 | None:intergenic | 30.0% | |
AAACGTCATATAATTTGGGA+CGG | + | chr3.1:77156681-77156700 | MS.gene06366:intron | 30.0% | |
AAAGAAGAATTGAAAGGGAA+AGG | + | chr3.1:77155807-77155826 | MS.gene06366:CDS | 30.0% | |
AACACTAAGATCAATTTCGA+AGG | - | chr3.1:77154154-77154173 | None:intergenic | 30.0% | |
ACAACTGAAATAAATCTTGG+AGG | + | chr3.1:77154494-77154513 | MS.gene06366:intron | 30.0% | |
AGAGCAAAGAAGAATTGAAA+GGG | + | chr3.1:77155802-77155821 | MS.gene06366:CDS | 30.0% | |
AGATTACCACACAAAATGAT+AGG | - | chr3.1:77154392-77154411 | None:intergenic | 30.0% | |
AGCATCTTAAAGAAAAGAGT+TGG | - | chr3.1:77157531-77157550 | None:intergenic | 30.0% | |
AGTACATACATATTGTAAGG+TGG | - | chr3.1:77158082-77158101 | None:intergenic | 30.0% | |
AGTGGAGGAATTTAAATTAC+TGG | - | chr3.1:77158314-77158333 | None:intergenic | 30.0% | |
ATAAAAACCGTGCAAATTAG+CGG | - | chr3.1:77157932-77157951 | None:intergenic | 30.0% | |
ATACGTGAAAAATAAGGGAT+CGG | - | chr3.1:77154973-77154992 | None:intergenic | 30.0% | |
ATCACAGTCAATTGAAATGA+AGG | + | chr3.1:77158458-77158477 | MS.gene06366:intron | 30.0% | |
CAAACATACCATTGTTTGAA+AGG | + | chr3.1:77154430-77154449 | MS.gene06366:intron | 30.0% | |
CAACATAAAGATTAGGAAGT+TGG | - | chr3.1:77157872-77157891 | None:intergenic | 30.0% | |
CAACTTCCTAATCTTTATGT+TGG | + | chr3.1:77157870-77157889 | MS.gene06366:intron | 30.0% | |
CAATTGAAAAATTGTCTGTG+AGG | + | chr3.1:77155402-77155421 | MS.gene06366:CDS | 30.0% | |
CATAGACAAACAATTTGAAG+AGG | - | chr3.1:77157582-77157601 | None:intergenic | 30.0% | |
CGTTTATTAGCTACTGAATT+CGG | + | chr3.1:77153001-77153020 | MS.gene06366:CDS | 30.0% | |
CTCATGAAGTTATAATGTGT+AGG | - | chr3.1:77154679-77154698 | None:intergenic | 30.0% | |
CTTTCCCATACCATTTATTA+AGG | + | chr3.1:77156580-77156599 | MS.gene06366:intron | 30.0% | |
GCAATATACTGTTATTGATG+TGG | + | chr3.1:77157029-77157048 | MS.gene06366:intron | 30.0% | |
GCAGAAATATATTGCAGAAA+AGG | + | chr3.1:77158782-77158801 | MS.gene06366:CDS | 30.0% | |
GCAGAATATTATCTATTTGC+TGG | + | chr3.1:77154054-77154073 | MS.gene06366:intron | 30.0% | |
GCCAGTTGAAAATAATGATT+AGG | + | chr3.1:77158883-77158902 | MS.gene06366:intron | 30.0% | |
GCTTCAAACCATAAAAGAAA+AGG | - | chr3.1:77157105-77157124 | None:intergenic | 30.0% | |
GGATAACATATAAATAGTGG+AGG | - | chr3.1:77158329-77158348 | None:intergenic | 30.0% | |
GGGAATAAGAATAATCGAAA+AGG | + | chr3.1:77154941-77154960 | MS.gene06366:intron | 30.0% | |
GTCCAAAACGTCATATAATT+TGG | + | chr3.1:77156676-77156695 | MS.gene06366:intron | 30.0% | |
GTGTTGGGATAAAGAATAAA+GGG | + | chr3.1:77157352-77157371 | MS.gene06366:intron | 30.0% | |
TCAACAATATTAGGTGATGA+TGG | - | chr3.1:77156973-77156992 | None:intergenic | 30.0% | |
TCAATTGACTGTGATTGATT+TGG | - | chr3.1:77158453-77158472 | None:intergenic | 30.0% | |
TCGAAATTGATCTTAGTGTT+TGG | + | chr3.1:77154154-77154173 | MS.gene06366:intron | 30.0% | |
TCTGTAATGCTTTGTCTATT+AGG | + | chr3.1:77154846-77154865 | MS.gene06366:intron | 30.0% | |
TGAATGATGATCAGGTATTA+TGG | + | chr3.1:77158631-77158650 | MS.gene06366:intron | 30.0% | |
TGCCTAGTATAAAAAGGTAA+TGG | - | chr3.1:77157615-77157634 | None:intergenic | 30.0% | |
TGTGTCTTCAAACATAAAGA+GGG | + | chr3.1:77156945-77156964 | MS.gene06366:CDS | 30.0% | |
TGTTGGGATAAAGAATAAAG+GGG | + | chr3.1:77157353-77157372 | MS.gene06366:intron | 30.0% | |
TTAAAATAAGAAGGGGAAGT+AGG | - | chr3.1:77155548-77155567 | None:intergenic | 30.0% | |
TTAACTTATCGTTTCATCAC+AGG | + | chr3.1:77155027-77155046 | MS.gene06366:intron | 30.0% | |
TTAATTAAGAAGTTACGCTC+AGG | - | chr3.1:77153404-77153423 | None:intergenic | 30.0% | |
TTCTGTATCTCTTTACTTTC+AGG | + | chr3.1:77156870-77156889 | MS.gene06366:intron | 30.0% | |
TTGTGTTTAAACTTAAGTGG+TGG | + | chr3.1:77153852-77153871 | MS.gene06366:intron | 30.0% | |
TTTATGTTTGAAGACACAGT+TGG | - | chr3.1:77156943-77156962 | None:intergenic | 30.0% | |
TTTGCGAAAAACTGTATGTT+TGG | + | chr3.1:77154278-77154297 | MS.gene06366:intron | 30.0% | |
! | AAAGGTTTTCGATCTACTAA+AGG | + | chr3.1:77158800-77158819 | MS.gene06366:CDS | 30.0% |
! | AATATATTTCTGCTGAAGAG+TGG | - | chr3.1:77158775-77158794 | None:intergenic | 30.0% |
! | AGTGTTGGGATAAAGAATAA+AGG | + | chr3.1:77157351-77157370 | MS.gene06366:intron | 30.0% |
! | ATAAGCCTTTTTAACAGTAG+CGG | - | chr3.1:77158703-77158722 | None:intergenic | 30.0% |
! | ATGAAGGGTTTAAAAGCTTT+TGG | + | chr3.1:77153761-77153780 | MS.gene06366:intron | 30.0% |
! | ATGCAAAAAGTATGACTCTA+TGG | - | chr3.1:77156839-77156858 | None:intergenic | 30.0% |
! | ATTGATTCCTATAGAAGTGT+TGG | + | chr3.1:77157336-77157355 | MS.gene06366:intron | 30.0% |
! | ATTTTCCGAACATTAAGAGT+TGG | + | chr3.1:77154200-77154219 | MS.gene06366:intron | 30.0% |
! | GACTTATAATTTGTGACGTA+GGG | - | chr3.1:77156436-77156455 | None:intergenic | 30.0% |
! | GATGATCTTTCCTCAATTTT+TGG | + | chr3.1:77156991-77157010 | MS.gene06366:CDS | 30.0% |
! | GATGATTTGATCAATGGATT+TGG | + | chr3.1:77153343-77153362 | MS.gene06366:CDS | 30.0% |
! | GCCAACTTTTCTTCATATTT+TGG | - | chr3.1:77155611-77155630 | None:intergenic | 30.0% |
! | GCCTAATCATTATTTTCAAC+TGG | - | chr3.1:77158887-77158906 | None:intergenic | 30.0% |
! | GTGAAATATTGGTTAGAGAT+TGG | + | chr3.1:77153783-77153802 | MS.gene06366:intron | 30.0% |
! | TAACAACTAATGGATAGTGT+AGG | - | chr3.1:77157461-77157480 | None:intergenic | 30.0% |
! | TACCTTTTTATACTAGGCAA+AGG | + | chr3.1:77157616-77157635 | MS.gene06366:intron | 30.0% |
! | TCCCAAATTATATGACGTTT+TGG | - | chr3.1:77156681-77156700 | None:intergenic | 30.0% |
! | TGACTTATAATTTGTGACGT+AGG | - | chr3.1:77156437-77156456 | None:intergenic | 30.0% |
! | TGTATAAGCATTTTCCAATC+AGG | + | chr3.1:77158353-77158372 | MS.gene06366:intron | 30.0% |
! | TTTCCATCCCTTTTCTTTTA+TGG | + | chr3.1:77157094-77157113 | MS.gene06366:intron | 30.0% |
! | TTTCGGTGTACATTAAATCA+CGG | - | chr3.1:77158500-77158519 | None:intergenic | 30.0% |
! | TTTGAACGGCATTTTTGAAT+TGG | + | chr3.1:77154572-77154591 | MS.gene06366:intron | 30.0% |
!! | ATGCTATATAGTTCTGATGA+AGG | + | chr3.1:77153745-77153764 | MS.gene06366:intron | 30.0% |
!! | CTTTTAAGAGGCTTTCATAT+AGG | + | chr3.1:77153948-77153967 | MS.gene06366:intron | 30.0% |
!! | TATCTACACATTGATTTCAG+AGG | + | chr3.1:77157983-77158002 | MS.gene06366:intron | 30.0% |
!! | TGCTATATAGTTCTGATGAA+GGG | + | chr3.1:77153746-77153765 | MS.gene06366:intron | 30.0% |
!! | TTGATTCCTATAGAAGTGTT+GGG | + | chr3.1:77157337-77157356 | MS.gene06366:intron | 30.0% |
!!! | CTTTTCTTTAAGATGCTAAC+TGG | + | chr3.1:77157534-77157553 | MS.gene06366:intron | 30.0% |
!!! | TCCCCTTCTTATTTTAATGA+TGG | + | chr3.1:77155551-77155570 | MS.gene06366:CDS | 30.0% |
AAATCTTGGAGGAGTTTGTA+AGG | + | chr3.1:77154505-77154524 | MS.gene06366:intron | 35.0% | |
AAGAATTGAAAGGGAAAGGA+AGG | + | chr3.1:77155811-77155830 | MS.gene06366:CDS | 35.0% | |
AATCCTACCTCCAAAAATTG+AGG | - | chr3.1:77157004-77157023 | None:intergenic | 35.0% | |
AATCTTGGAGGAGTTTGTAA+GGG | + | chr3.1:77154506-77154525 | MS.gene06366:intron | 35.0% | |
ACCATTGTTTGAAAGGTAAC+AGG | + | chr3.1:77154437-77154456 | MS.gene06366:intron | 35.0% | |
AGATTCACGAAGGAACATTT+CGG | - | chr3.1:77158517-77158536 | None:intergenic | 35.0% | |
ATCATGATTGGAAGAGTGAA+AGG | - | chr3.1:77153131-77153150 | None:intergenic | 35.0% | |
ATGAAAGCCTCTTAAAAGAC+AGG | - | chr3.1:77153946-77153965 | None:intergenic | 35.0% | |
ATGTCATCATCATCATCCAA+AGG | + | chr3.1:77153052-77153071 | MS.gene06366:CDS | 35.0% | |
ATTCGGTCATTCGAAGAAAA+CGG | + | chr3.1:77153291-77153310 | MS.gene06366:CDS | 35.0% | |
CCAAACCAACTCTTAATGTT+CGG | - | chr3.1:77154208-77154227 | None:intergenic | 35.0% | |
CTGTGTCTTCAAACATAAAG+AGG | + | chr3.1:77156944-77156963 | MS.gene06366:CDS | 35.0% | |
CTTGTGAACTTCCATATTCA+AGG | - | chr3.1:77153998-77154017 | None:intergenic | 35.0% | |
CTTTATCCCAACACTTCTAT+AGG | - | chr3.1:77157346-77157365 | None:intergenic | 35.0% | |
GAATATTTAGGCATGCCATA+TGG | - | chr3.1:77155491-77155510 | None:intergenic | 35.0% | |
GAATTTCCAAGTCCATCAAA+AGG | - | chr3.1:77155284-77155303 | None:intergenic | 35.0% | |
GAGAGCAAAGAAGAATTGAA+AGG | + | chr3.1:77155801-77155820 | MS.gene06366:CDS | 35.0% | |
GATCTCAAAAGTGGCTATAA+TGG | + | chr3.1:77154176-77154195 | MS.gene06366:intron | 35.0% | |
GATTCTAATAAACCAGTAGC+TGG | + | chr3.1:77155515-77155534 | MS.gene06366:CDS | 35.0% | |
GGAAAGAGAAAATGAAAGAC+AGG | + | chr3.1:77155865-77155884 | MS.gene06366:CDS | 35.0% | |
GGGATTAGAATTGAAGAGAT+CGG | - | chr3.1:77153155-77153174 | None:intergenic | 35.0% | |
GTGTAGGTACAAGATTTCAT+TGG | - | chr3.1:77154663-77154682 | None:intergenic | 35.0% | |
GTTATCCTTGCAGTTAAACA+AGG | + | chr3.1:77154076-77154095 | MS.gene06366:intron | 35.0% | |
GTTGGATGATTGTGATTAGT+TGG | + | chr3.1:77157888-77157907 | MS.gene06366:intron | 35.0% | |
TACCTGATCATCATTCATGA+AGG | - | chr3.1:77158628-77158647 | None:intergenic | 35.0% | |
TAGCTTATAAAACGGACCTA+TGG | + | chr3.1:77154803-77154822 | MS.gene06366:intron | 35.0% | |
TAGTGTTTGGATCTCAAAAG+TGG | + | chr3.1:77154167-77154186 | MS.gene06366:intron | 35.0% | |
TATCAATAAACCTCAACCTC+AGG | - | chr3.1:77153570-77153589 | None:intergenic | 35.0% | |
TCATGACGATATATGGCTAA+CGG | + | chr3.1:77155637-77155656 | MS.gene06366:CDS | 35.0% | |
TGAAAGCCTCTTAAAAGACA+GGG | - | chr3.1:77153945-77153964 | None:intergenic | 35.0% | |
TGCAGTTAAACAAGGAATAC+TGG | + | chr3.1:77154084-77154103 | MS.gene06366:intron | 35.0% | |
TGCCTTTGCCTAGTATAAAA+AGG | - | chr3.1:77157621-77157640 | None:intergenic | 35.0% | |
TTAAACGAAATGCGATGCTT+AGG | - | chr3.1:77154905-77154924 | None:intergenic | 35.0% | |
TTGTTATGTGTTCGTCTATC+AGG | - | chr3.1:77155431-77155450 | None:intergenic | 35.0% | |
! | AAGGGTTCTTATTTCAGTAG+TGG | + | chr3.1:77154716-77154735 | MS.gene06366:intron | 35.0% |
! | CTATAAGTTACTGGAGTGTT+TGG | - | chr3.1:77158548-77158567 | None:intergenic | 35.0% |
! | GAAGTTGGTTGTGTAAAAAG+AGG | - | chr3.1:77155674-77155693 | None:intergenic | 35.0% |
! | GATGATACTGATCCTTTTGA+TGG | + | chr3.1:77155269-77155288 | MS.gene06366:CDS | 35.0% |
! | GTATTCCTTGTTTAACTGCA+AGG | - | chr3.1:77154084-77154103 | None:intergenic | 35.0% |
! | TATAGCATCGAAACTTCTGA+TGG | - | chr3.1:77153733-77153752 | None:intergenic | 35.0% |
! | TCTGATGATGAACCAATATC+AGG | - | chr3.1:77155059-77155078 | None:intergenic | 35.0% |
! | TTGAATTGGTTCATCATTGG+TGG | + | chr3.1:77154586-77154605 | MS.gene06366:intron | 35.0% |
! | TTGGATGATGATGATGACAT+TGG | - | chr3.1:77153052-77153071 | None:intergenic | 35.0% |
! | TTGTCTCCTATCATTTTGTG+TGG | + | chr3.1:77154383-77154402 | MS.gene06366:intron | 35.0% |
! | TTTATACTAGGCAAAGGCAT+TGG | + | chr3.1:77157622-77157641 | MS.gene06366:intron | 35.0% |
! | TTTGCTTGCATTTGAAGCAA+CGG | + | chr3.1:77153505-77153524 | MS.gene06366:intron | 35.0% |
!! | AAAATGCACTGATTCTCCAA+TGG | - | chr3.1:77153811-77153830 | None:intergenic | 35.0% |
!! | AACATTAAGAGTTGGTTTGG+AGG | + | chr3.1:77154208-77154227 | MS.gene06366:intron | 35.0% |
!! | ACATTAAGAGTTGGTTTGGA+GGG | + | chr3.1:77154209-77154228 | MS.gene06366:intron | 35.0% |
!! | AGAGGAAGTTTTGGTGAAAT+TGG | - | chr3.1:77153083-77153102 | None:intergenic | 35.0% |
!! | GATCTTTCCTCAATTTTTGG+AGG | + | chr3.1:77156994-77157013 | MS.gene06366:CDS | 35.0% |
!! | TAACTCTTGGCTTTGATGTT+TGG | + | chr3.1:77156359-77156378 | MS.gene06366:intron | 35.0% |
!! | TTTCCTCAATTTTTGGAGGT+AGG | + | chr3.1:77156998-77157017 | MS.gene06366:intron | 35.0% |
!! | TTTTTGGAGGTAGGATTTTG+TGG | + | chr3.1:77157007-77157026 | MS.gene06366:intron | 35.0% |
!!! | TAGTGGATTTTTCTTCTCAG+CGG | + | chr3.1:77154733-77154752 | MS.gene06366:intron | 35.0% |
AAAACGGTGAAGAATGAGAG+AGG | + | chr3.1:77153307-77153326 | MS.gene06366:CDS | 40.0% | |
AAAAGGGTCTTCTGTTGCAT+TGG | - | chr3.1:77155111-77155130 | None:intergenic | 40.0% | |
AACCCACATGTAGATAACAG+TGG | - | chr3.1:77158909-77158928 | None:intergenic | 40.0% | |
AACTCCTGATCATGTTCAAC+AGG | - | chr3.1:77155458-77155477 | None:intergenic | 40.0% | |
AAGTACTTGGTATAATGCCC+AGG | + | chr3.1:77158102-77158121 | MS.gene06366:intron | 40.0% | |
AGAAAATGAAAGACAGGCTG+TGG | + | chr3.1:77155871-77155890 | MS.gene06366:CDS | 40.0% | |
AGAACAACAGAGACTTGAGA+GGG | + | chr3.1:77155844-77155863 | MS.gene06366:CDS | 40.0% | |
AGAATTTCAGGAGGTTGAAG+GGG | + | chr3.1:77157140-77157159 | MS.gene06366:CDS | 40.0% | |
AGACAGGGAATGCATGATAT+CGG | - | chr3.1:77153930-77153949 | None:intergenic | 40.0% | |
AGCAATGAGGTGATTAGATG+AGG | - | chr3.1:77158210-77158229 | None:intergenic | 40.0% | |
AGGAGACAAACAAACGCATA+TGG | - | chr3.1:77154372-77154391 | None:intergenic | 40.0% | |
AGTACATATTCCCAAGTCAG+AGG | + | chr3.1:77155730-77155749 | MS.gene06366:CDS | 40.0% | |
AGTACTTGGTATAATGCCCA+GGG | + | chr3.1:77158103-77158122 | MS.gene06366:intron | 40.0% | |
ATACTAAAGCGGCTAACTCT+TGG | + | chr3.1:77156346-77156365 | MS.gene06366:intron | 40.0% | |
ATCTTGGAGGAGTTTGTAAG+GGG | + | chr3.1:77154507-77154526 | MS.gene06366:intron | 40.0% | |
ATGTGAATCGAAGTTGAGAG+AGG | - | chr3.1:77153101-77153120 | None:intergenic | 40.0% | |
ATGTTTGAAGACACAGTTGG+AGG | - | chr3.1:77156940-77156959 | None:intergenic | 40.0% | |
ATTGGAAGAGTGAAAGGATC+GGG | - | chr3.1:77153125-77153144 | None:intergenic | 40.0% | |
ATTGGCTGAGAAGAATCAAC+GGG | + | chr3.1:77157640-77157659 | MS.gene06366:CDS | 40.0% | |
CCATATATCGTCATGATCTG+AGG | - | chr3.1:77155633-77155652 | None:intergenic | 40.0% | |
CCTCAGATCATGACGATATA+TGG | + | chr3.1:77155630-77155649 | MS.gene06366:CDS | 40.0% | |
CTCCTTCATGAATGATGATC+AGG | + | chr3.1:77158623-77158642 | MS.gene06366:intron | 40.0% | |
CTGACACAGATGCATGTATT+GGG | - | chr3.1:77157841-77157860 | None:intergenic | 40.0% | |
CTTCTGATGGAAGACATGTT+TGG | - | chr3.1:77153720-77153739 | None:intergenic | 40.0% | |
GAAGAGATCGGAATCATGAT+TGG | - | chr3.1:77153143-77153162 | None:intergenic | 40.0% | |
GAATAAAGGGGAGTTAGAGA+AGG | + | chr3.1:77157365-77157384 | MS.gene06366:intron | 40.0% | |
GAGAAGATCATCAAACGCAA+CGG | - | chr3.1:77153266-77153285 | None:intergenic | 40.0% | |
GAGAATTTCAGGAGGTTGAA+GGG | + | chr3.1:77157139-77157158 | MS.gene06366:CDS | 40.0% | |
GAGTTTCATCAAGTGCCATA+TGG | + | chr3.1:77155473-77155492 | MS.gene06366:CDS | 40.0% | |
GATGAACCAATATCAGGAGT+GGG | - | chr3.1:77155053-77155072 | None:intergenic | 40.0% | |
GATTCCTGTTGAACATGATC+AGG | + | chr3.1:77155451-77155470 | MS.gene06366:CDS | 40.0% | |
GATTGGAAGAGTGAAAGGAT+CGG | - | chr3.1:77153126-77153145 | None:intergenic | 40.0% | |
GCCTGTTACCTTTCAAACAA+TGG | - | chr3.1:77154441-77154460 | None:intergenic | 40.0% | |
GGTGAAATTGGAAGATCCTT+TGG | - | chr3.1:77153071-77153090 | None:intergenic | 40.0% | |
TAATCTACTGACGACATTGC+AGG | - | chr3.1:77154110-77154129 | None:intergenic | 40.0% | |
TACAACATTGTCCACTGAGT+AGG | - | chr3.1:77158233-77158252 | None:intergenic | 40.0% | |
TACAGCCGCTACTGTTAAAA+AGG | + | chr3.1:77158695-77158714 | MS.gene06366:CDS | 40.0% | |
TACTACAGTGCTCTGTAAAG+AGG | - | chr3.1:77158417-77158436 | None:intergenic | 40.0% | |
TATTATGGCCTGAATGTGGT+TGG | + | chr3.1:77158646-77158665 | MS.gene06366:CDS | 40.0% | |
TGATGAACCAATATCAGGAG+TGG | - | chr3.1:77155054-77155073 | None:intergenic | 40.0% | |
TGGACTCCCTTTAGTCAAAT+AGG | + | chr3.1:77154606-77154625 | MS.gene06366:intron | 40.0% | |
TGGTTGCCTTCCTTTACTAT+TGG | - | chr3.1:77157291-77157310 | None:intergenic | 40.0% | |
TTGAAGGGGAAAGTGAAGAA+AGG | + | chr3.1:77157154-77157173 | MS.gene06366:CDS | 40.0% | |
! | AAGTGGTGGAGACACATAAT+TGG | + | chr3.1:77153866-77153885 | MS.gene06366:intron | 40.0% |
! | ATCATAAACAGGCGAGTTGA+CGG | - | chr3.1:77153212-77153231 | None:intergenic | 40.0% |
! | CATATTTGTTGGTGTCTTGC+CGG | + | chr3.1:77153668-77153687 | MS.gene06366:intron | 40.0% |
! | CATTGGCTGAGAAGAATCAA+CGG | + | chr3.1:77157639-77157658 | MS.gene06366:CDS | 40.0% |
! | CCGAACATTAAGAGTTGGTT+TGG | + | chr3.1:77154205-77154224 | MS.gene06366:intron | 40.0% |
! | CTTCTAATGGGTCTGAAAAG+TGG | - | chr3.1:77155178-77155197 | None:intergenic | 40.0% |
! | GAAGTTGAGAGAGGAAGTTT+TGG | - | chr3.1:77153092-77153111 | None:intergenic | 40.0% |
! | GAATTCGGTTTGAAACCTCA+AGG | + | chr3.1:77153016-77153035 | MS.gene06366:CDS | 40.0% |
! | GTCATATAATTTGGGACGGA+GGG | + | chr3.1:77156685-77156704 | MS.gene06366:intron | 40.0% |
! | GTTGCGTTTGATGATCTTCT+CGG | + | chr3.1:77153265-77153284 | MS.gene06366:CDS | 40.0% |
! | TACCAGCATTTTCATCAGAG+AGG | + | chr3.1:77155306-77155325 | MS.gene06366:CDS | 40.0% |
! | TGCATTCCCTGTCTTTTAAG+AGG | + | chr3.1:77153936-77153955 | MS.gene06366:intron | 40.0% |
! | TTTTAGACCCGTCAATTCTC+GGG | + | chr3.1:77155574-77155593 | MS.gene06366:CDS | 40.0% |
!! | ACATTGATTTCAGAGGCTTG+CGG | + | chr3.1:77157990-77158009 | MS.gene06366:intron | 40.0% |
!! | GTTTTAGACCCGTCAATTCT+CGG | + | chr3.1:77155573-77155592 | MS.gene06366:CDS | 40.0% |
!! | TCTGACTTGGGAATATGTAC+TGG | - | chr3.1:77155731-77155750 | None:intergenic | 40.0% |
!! | TCTTTTTATTTGTGACCGGG+TGG | + | chr3.1:77157721-77157740 | MS.gene06366:intron | 40.0% |
!!! | ACTGATCCTTTTGATGGACT+TGG | + | chr3.1:77155275-77155294 | MS.gene06366:CDS | 40.0% |
AAACCATGAGCAGCAGCAAA+AGG | + | chr3.1:77155766-77155785 | MS.gene06366:CDS | 45.0% | |
AAGAAGGGGAAGTAGGCATT+TGG | - | chr3.1:77155541-77155560 | None:intergenic | 45.0% | |
AAGACACAGTTGGAGGTTTC+TGG | - | chr3.1:77156933-77156952 | None:intergenic | 45.0% | |
ACAGAAGAGTTAGACCTAGG+AGG | - | chr3.1:77156298-77156317 | None:intergenic | 45.0% | |
AGAAAGGCGAAAAGCCAGAT+TGG | + | chr3.1:77157170-77157189 | MS.gene06366:CDS | 45.0% | |
AGGAGAGAGTCTCTTCTCTA+AGG | - | chr3.1:77157441-77157460 | None:intergenic | 45.0% | |
AGGCCACTGTTATCTACATG+TGG | + | chr3.1:77158903-77158922 | MS.gene06366:intron | 45.0% | |
ATATCTGCCCGAGAATTGAC+GGG | - | chr3.1:77155584-77155603 | None:intergenic | 45.0% | |
ATGTAGTGAGACTGAACCTG+AGG | + | chr3.1:77153551-77153570 | MS.gene06366:intron | 45.0% | |
ATTGGTGCAGATTTGCCTTG+AGG | - | chr3.1:77153034-77153053 | None:intergenic | 45.0% | |
CAGGTATTATGGCCTGAATG+TGG | + | chr3.1:77158642-77158661 | MS.gene06366:intron | 45.0% | |
CATATCTGCCCGAGAATTGA+CGG | - | chr3.1:77155585-77155604 | None:intergenic | 45.0% | |
CCAATACATGCATCTGTGTC+AGG | + | chr3.1:77157839-77157858 | MS.gene06366:intron | 45.0% | |
CCTGAACTTGTGTTTGACCA+CGG | - | chr3.1:77155362-77155381 | None:intergenic | 45.0% | |
CCTGACACAGATGCATGTAT+TGG | - | chr3.1:77157842-77157861 | None:intergenic | 45.0% | |
CCTGATAAAGTGCAGCAGAA+GGG | + | chr3.1:77158747-77158766 | MS.gene06366:CDS | 45.0% | |
CTCACAGAAGAGTTAGACCT+AGG | - | chr3.1:77156301-77156320 | None:intergenic | 45.0% | |
CTCAGTAACCACACCTTTGA+CGG | - | chr3.1:77153381-77153400 | None:intergenic | 45.0% | |
GAGAACAACAGAGACTTGAG+AGG | + | chr3.1:77155843-77155862 | MS.gene06366:CDS | 45.0% | |
GGAGAATTTCAGGAGGTTGA+AGG | + | chr3.1:77157138-77157157 | MS.gene06366:CDS | 45.0% | |
GGCAAAGAAAAGGGCTGAAA+AGG | + | chr3.1:77156054-77156073 | MS.gene06366:CDS | 45.0% | |
GGCCACTGTTATCTACATGT+GGG | + | chr3.1:77158904-77158923 | MS.gene06366:intron | 45.0% | |
GGTAGCGTATGATCTAGTGA+AGG | + | chr3.1:77153526-77153545 | MS.gene06366:intron | 45.0% | |
GGTCAAACACAAGTTCAGGT+TGG | + | chr3.1:77155363-77155382 | MS.gene06366:CDS | 45.0% | |
GTCCTCTCTGATGAAAATGC+TGG | - | chr3.1:77155311-77155330 | None:intergenic | 45.0% | |
GTGCAAATTAGCGGAGAACT+CGG | - | chr3.1:77157923-77157942 | None:intergenic | 45.0% | |
TCAGTAACCACACCTTTGAC+GGG | - | chr3.1:77153380-77153399 | None:intergenic | 45.0% | |
TCATTCGCTCTGCTCATTAC+AGG | + | chr3.1:77158283-77158302 | MS.gene06366:intron | 45.0% | |
TCCTGAAATTCTCCAGCTGA+GGG | - | chr3.1:77157132-77157151 | None:intergenic | 45.0% | |
TCCTGATAAAGTGCAGCAGA+AGG | + | chr3.1:77158746-77158765 | MS.gene06366:CDS | 45.0% | |
TCTGCTCTCTTTGAGTCTGT+AGG | - | chr3.1:77157667-77157686 | None:intergenic | 45.0% | |
TGAATCGTTCTTCAGCGTGA+GGG | + | chr3.1:77156249-77156268 | MS.gene06366:CDS | 45.0% | |
TGAGGATGAATCAGTTGGAG+CGG | - | chr3.1:77155153-77155172 | None:intergenic | 45.0% | |
TGATGCACAATTTCAGCCAG+AGG | + | chr3.1:77156903-77156922 | MS.gene06366:CDS | 45.0% | |
TGCTGCTGAGGCAAAGAAAA+GGG | + | chr3.1:77156045-77156064 | MS.gene06366:CDS | 45.0% | |
TTGAATCGTTCTTCAGCGTG+AGG | + | chr3.1:77156248-77156267 | MS.gene06366:CDS | 45.0% | |
TTGTGTTTGACCACGGTGTT+GGG | - | chr3.1:77155355-77155374 | None:intergenic | 45.0% | |
! | CGTCATATAATTTGGGACGG+AGG | + | chr3.1:77156684-77156703 | MS.gene06366:intron | 45.0% |
! | GAGTTCTCCGCTAATTTGCA+CGG | + | chr3.1:77157922-77157941 | MS.gene06366:intron | 45.0% |
! | GGAGTTTGTAAGGGGTACAT+AGG | + | chr3.1:77154515-77154534 | MS.gene06366:intron | 45.0% |
! | GTGAAGAATGAGAGAGGTGT+CGG | + | chr3.1:77153313-77153332 | MS.gene06366:CDS | 45.0% |
! | TCAGAGAGGACTAGCAGATA+TGG | + | chr3.1:77155320-77155339 | MS.gene06366:CDS | 45.0% |
! | TGGTTAGAGATTGGCTCCAT+TGG | + | chr3.1:77153792-77153811 | MS.gene06366:intron | 45.0% |
! | TTGGGAATATGTACTGGTCG+AGG | - | chr3.1:77155725-77155744 | None:intergenic | 45.0% |
!! | GGACTTTGAAGTTAAGCGCT+GGG | + | chr3.1:77158020-77158039 | MS.gene06366:CDS | 45.0% |
!! | TGGACTTTGAAGTTAAGCGC+TGG | + | chr3.1:77158019-77158038 | MS.gene06366:CDS | 45.0% |
AAGCTAGAGTGCGTGCTGAA+AGG | + | chr3.1:77155981-77156000 | MS.gene06366:CDS | 50.0% | |
ACAAGCTGAAGCCCGTGAAA+GGG | + | chr3.1:77156021-77156040 | MS.gene06366:CDS | 50.0% | |
ACCTCATTGCTCCTACTCAG+TGG | + | chr3.1:77158219-77158238 | MS.gene06366:intron | 50.0% | |
ACTGCTTCTCTCCTCTGACT+TGG | - | chr3.1:77155744-77155763 | None:intergenic | 50.0% | |
AGCATAAGGCAGCAAACCCT+GGG | - | chr3.1:77158122-77158141 | None:intergenic | 50.0% | |
AGCTAGAGTGCGTGCTGAAA+GGG | + | chr3.1:77155982-77156001 | MS.gene06366:CDS | 50.0% | |
AGGGTCTTCTGTTGCATTGG+AGG | - | chr3.1:77155108-77155127 | None:intergenic | 50.0% | |
CACGTGTCAGTGTCAAACAC+CGG | - | chr3.1:77153690-77153709 | None:intergenic | 50.0% | |
CAGATTGGAACGCCTTCAGA+GGG | + | chr3.1:77157185-77157204 | MS.gene06366:CDS | 50.0% | |
CAGGGAATGCATGATATCGG+TGG | - | chr3.1:77153927-77153946 | None:intergenic | 50.0% | |
CCCTTCTGCTGCACTTTATC+AGG | - | chr3.1:77158750-77158769 | None:intergenic | 50.0% | |
CCGTGGTCAAACACAAGTTC+AGG | + | chr3.1:77155359-77155378 | MS.gene06366:CDS | 50.0% | |
CCTCTTTACGACGACGATGA+CGG | + | chr3.1:77153235-77153254 | MS.gene06366:CDS | 50.0% | |
CTCAGCTGGAGAATTTCAGG+AGG | + | chr3.1:77157131-77157150 | MS.gene06366:CDS | 50.0% | |
CTCCTGAAATTCTCCAGCTG+AGG | - | chr3.1:77157133-77157152 | None:intergenic | 50.0% | |
CTGCTGCTGAGGCAAAGAAA+AGG | + | chr3.1:77156044-77156063 | MS.gene06366:CDS | 50.0% | |
CTGCTTCTCTCCTCTGACTT+GGG | - | chr3.1:77155743-77155762 | None:intergenic | 50.0% | |
CTGTATGAGCAGAAACCACC+CGG | - | chr3.1:77157739-77157758 | None:intergenic | 50.0% | |
CTTGTGTTTGACCACGGTGT+TGG | - | chr3.1:77155356-77155375 | None:intergenic | 50.0% | |
GAATCGTTCTTCAGCGTGAG+GGG | + | chr3.1:77156250-77156269 | MS.gene06366:CDS | 50.0% | |
GACGGACATGGAATCGAAAC+CGG | - | chr3.1:77153194-77153213 | None:intergenic | 50.0% | |
GGCTGCTTCAAGATTCACGA+AGG | - | chr3.1:77158527-77158546 | None:intergenic | 50.0% | |
TAGCATAAGGCAGCAAACCC+TGG | - | chr3.1:77158123-77158142 | None:intergenic | 50.0% | |
TCCACTGAGTAGGAGCAATG+AGG | - | chr3.1:77158223-77158242 | None:intergenic | 50.0% | |
TCCCTCAGCTGGAGAATTTC+AGG | + | chr3.1:77157128-77157147 | MS.gene06366:CDS | 50.0% | |
TGAGACTGAACCTGAGGTTG+AGG | + | chr3.1:77153557-77153576 | MS.gene06366:intron | 50.0% | |
TGAGCAGCAGCAAAAGGAGA+TGG | + | chr3.1:77155772-77155791 | MS.gene06366:CDS | 50.0% | |
TGGCCTGAGGATGAATCAGT+TGG | - | chr3.1:77155158-77155177 | None:intergenic | 50.0% | |
! | AGAACGTGCTGCTGTGGAAA+GGG | + | chr3.1:77156156-77156175 | MS.gene06366:CDS | 50.0% |
! | ATATGTACTGGTCGAGGAGG+AGG | - | chr3.1:77155719-77155738 | None:intergenic | 50.0% |
! | GATGATCTTCTCGGCGGATT+CGG | + | chr3.1:77153274-77153293 | MS.gene06366:CDS | 50.0% |
! | GCGTTTGATGATCTTCTCGG+CGG | + | chr3.1:77153268-77153287 | MS.gene06366:CDS | 50.0% |
! | GCTCCAACTGATTCATCCTC+AGG | + | chr3.1:77155152-77155171 | MS.gene06366:CDS | 50.0% |
! | GGAATATGTACTGGTCGAGG+AGG | - | chr3.1:77155722-77155741 | None:intergenic | 50.0% |
! | TAAAGCAGAACGTGCTGCTG+TGG | + | chr3.1:77156150-77156169 | MS.gene06366:CDS | 50.0% |
! | TCTCCTTTTGCTGCTGCTCA+TGG | - | chr3.1:77155772-77155791 | None:intergenic | 50.0% |
! | TGTGTTTGACCACGGTGTTG+GGG | - | chr3.1:77155354-77155373 | None:intergenic | 50.0% |
! | TTTGAAGCATCTCCCTCAGC+TGG | + | chr3.1:77157117-77157136 | MS.gene06366:intron | 50.0% |
!! | GAGTTGGTTTGGAGGGAAAG+AGG | + | chr3.1:77154216-77154235 | MS.gene06366:intron | 50.0% |
!! | GGAGGTTTCTGGTTTACCTC+TGG | - | chr3.1:77156922-77156941 | None:intergenic | 50.0% |
AAAGGCTGCTGCAGGGGAAA+AGG | + | chr3.1:77156072-77156091 | MS.gene06366:CDS | 55.0% | |
AAGTCCTCCCGTCAAAGGTG+TGG | + | chr3.1:77153370-77153389 | MS.gene06366:intron | 55.0% | |
ACTGCCTGCCAACCACATTC+AGG | - | chr3.1:77158657-77158676 | None:intergenic | 55.0% | |
AGCAGCTGCAGCTCTTTCTC+GGG | - | chr3.1:77156194-77156213 | None:intergenic | 55.0% | |
AGCTCGCCAAAGAGCTGAGA+AGG | + | chr3.1:77155934-77155953 | MS.gene06366:CDS | 55.0% | |
AGCTTGTGCCCTCTGAACAG+CGG | - | chr3.1:77156008-77156027 | None:intergenic | 55.0% | |
ATGGCCTGAATGTGGTTGGC+AGG | + | chr3.1:77158650-77158669 | MS.gene06366:CDS | 55.0% | |
CACAAGCTGAAGCCCGTGAA+AGG | + | chr3.1:77156020-77156039 | MS.gene06366:CDS | 55.0% | |
CACAGGCCCACTCCTGATAT+TGG | + | chr3.1:77155044-77155063 | MS.gene06366:intron | 55.0% | |
CAGCAGCCTTCTCAGCTCTT+TGG | - | chr3.1:77155943-77155962 | None:intergenic | 55.0% | |
CAGCAGCTGCAGCTCTTTCT+CGG | - | chr3.1:77156195-77156214 | None:intergenic | 55.0% | |
CCAGATTGGAACGCCTTCAG+AGG | + | chr3.1:77157184-77157203 | MS.gene06366:CDS | 55.0% | |
CCGTCATCGTCGTCGTAAAG+AGG | - | chr3.1:77153238-77153257 | None:intergenic | 55.0% | |
GAGAAAGAGCTGCAGCTGCA+AGG | + | chr3.1:77156107-77156126 | MS.gene06366:CDS | 55.0% | |
GAGTTAGACCTAGGAGGCCT+TGG | - | chr3.1:77156292-77156311 | None:intergenic | 55.0% | |
GCAGCAGCAAAAGGAGATGG+AGG | + | chr3.1:77155775-77155794 | MS.gene06366:CDS | 55.0% | |
GGAACAAGTCCTCCCGTCAA+AGG | + | chr3.1:77153365-77153384 | MS.gene06366:CDS | 55.0% | |
GGACATGGAATCGAAACCGG+AGG | - | chr3.1:77153191-77153210 | None:intergenic | 55.0% | |
GTAACCACACCTTTGACGGG+AGG | - | chr3.1:77153377-77153396 | None:intergenic | 55.0% | |
GTAGGCATTTGGCCAGCTAC+TGG | - | chr3.1:77155530-77155549 | None:intergenic | 55.0% | |
TCAGAGGCTTGCGGAAACAC+TGG | + | chr3.1:77157999-77158018 | MS.gene06366:intron | 55.0% | |
TGAAAGGGCCGCTGTTCAGA+GGG | + | chr3.1:77155997-77156016 | MS.gene06366:CDS | 55.0% | |
TGGGTCTGAAAAGTGGCCTG+AGG | - | chr3.1:77155171-77155190 | None:intergenic | 55.0% | |
! | AACAGGCGAGTTGACGGACA+TGG | - | chr3.1:77153206-77153225 | None:intergenic | 55.0% |
! | CAGAACGTGCTGCTGTGGAA+AGG | + | chr3.1:77156155-77156174 | MS.gene06366:CDS | 55.0% |
! | TGACCACGGTGTTGGGGAAT+CGG | - | chr3.1:77155348-77155367 | None:intergenic | 55.0% |
!! | AAGTTAAGCGCTGGGCTGCA+GGG | + | chr3.1:77158028-77158047 | MS.gene06366:CDS | 55.0% |
!! | CAAGTGTCGGCGTGTGAGTA+TGG | - | chr3.1:77153614-77153633 | None:intergenic | 55.0% |
!! | CCTCTGAAGGCGTTCCAATC+TGG | - | chr3.1:77157187-77157206 | None:intergenic | 55.0% |
!! | GAAGGTGGTGGAGCAGAAGT+TGG | - | chr3.1:77155689-77155708 | None:intergenic | 55.0% |
AGGGCTGAAAAGGCTGCTGC+AGG | + | chr3.1:77156064-77156083 | MS.gene06366:CDS | 60.0% | |
ATAGCGCTCCAAGGCCTCCT+AGG | + | chr3.1:77156281-77156300 | MS.gene06366:CDS | 60.0% | |
CCCATCTCTCGTAGCACCTC+CGG | + | chr3.1:77153172-77153191 | MS.gene06366:CDS | 60.0% | |
CCTCAGCAGCAGCCCTTTCA+CGG | - | chr3.1:77156036-77156055 | None:intergenic | 60.0% | |
CGTTCTTCAGCGTGAGGGGA+CGG | + | chr3.1:77156254-77156273 | MS.gene06366:CDS | 60.0% | |
CTCAGCAGCAGCCCTTTCAC+GGG | - | chr3.1:77156035-77156054 | None:intergenic | 60.0% | |
CTGAAAGGGCCGCTGTTCAG+AGG | + | chr3.1:77155996-77156015 | MS.gene06366:CDS | 60.0% | |
GGCTGAAAAGGCTGCTGCAG+GGG | + | chr3.1:77156066-77156085 | MS.gene06366:CDS | 60.0% | |
GGGCTGAAAAGGCTGCTGCA+GGG | + | chr3.1:77156065-77156084 | MS.gene06366:CDS | 60.0% | |
GTTCTTCAGCGTGAGGGGAC+GGG | + | chr3.1:77156255-77156274 | MS.gene06366:CDS | 60.0% | |
TGTGGAAAGGGCTGCTGCAG+AGG | + | chr3.1:77156168-77156187 | MS.gene06366:CDS | 60.0% | |
! | AGGAGGCCTTGGAGCGCTAT+TGG | - | chr3.1:77156281-77156300 | None:intergenic | 60.0% |
! | CGAGGAGGAGGTGGTCTTGA+AGG | - | chr3.1:77155707-77155726 | None:intergenic | 60.0% |
! | GGAGGAGGTGGTCTTGAAGG+TGG | - | chr3.1:77155704-77155723 | None:intergenic | 60.0% |
! | GGAGGTGGTCTTGAAGGTGG+TGG | - | chr3.1:77155701-77155720 | None:intergenic | 60.0% |
! | TGTACTGGTCGAGGAGGAGG+TGG | - | chr3.1:77155716-77155735 | None:intergenic | 60.0% |
!! | ACCGGAGGTGCTACGAGAGA+TGG | - | chr3.1:77153176-77153195 | None:intergenic | 60.0% |
!! | CCGGAGGTGCTACGAGAGAT+GGG | - | chr3.1:77153175-77153194 | None:intergenic | 60.0% |
!! | GAAGTTAAGCGCTGGGCTGC+AGG | + | chr3.1:77158027-77158046 | MS.gene06366:CDS | 60.0% |
CCGTGAAAGGGCTGCTGCTG+AGG | + | chr3.1:77156033-77156052 | MS.gene06366:CDS | 65.0% | |
CGCTGGGCTGCAGGGAAAGA+GGG | + | chr3.1:77158036-77158055 | MS.gene06366:CDS | 65.0% | |
GACGGGCCAATAGCGCTCCA+AGG | + | chr3.1:77156272-77156291 | MS.gene06366:CDS | 65.0% | |
GCTGGGCTGCAGGGAAAGAG+GGG | + | chr3.1:77158037-77158056 | MS.gene06366:CDS | 65.0% | |
GGAACGCCTTCAGAGGGCTC+AGG | + | chr3.1:77157191-77157210 | MS.gene06366:CDS | 65.0% | |
!! | GCACCGATTCCCCAACACCG+TGG | + | chr3.1:77155342-77155361 | MS.gene06366:CDS | 65.0% |
CGCGCTCCTGAGCCCTCTGA+AGG | - | chr3.1:77157200-77157219 | None:intergenic | 70.0% | |
GCGCTGGGCTGCAGGGAAAG+AGG | + | chr3.1:77158035-77158054 | MS.gene06366:CDS | 70.0% | |
! | TCAGAGGGCTCAGGAGCGCG+CGG | + | chr3.1:77157200-77157219 | MS.gene06366:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 77152986 | 77158937 | 77152986 | ID=MS.gene06366 |
chr3.1 | mRNA | 77152986 | 77158937 | 77152986 | ID=MS.gene06366.t1;Parent=MS.gene06366 |
chr3.1 | exon | 77152986 | 77153386 | 77152986 | ID=MS.gene06366.t1.exon1;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77152986 | 77153386 | 77152986 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77155049 | 77156315 | 77155049 | ID=MS.gene06366.t1.exon2;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77155049 | 77156315 | 77155049 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77156892 | 77157015 | 77156892 | ID=MS.gene06366.t1.exon3;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77156892 | 77157015 | 77156892 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77157124 | 77157221 | 77157124 | ID=MS.gene06366.t1.exon4;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77157124 | 77157221 | 77157124 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77157632 | 77157697 | 77157632 | ID=MS.gene06366.t1.exon5;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77157632 | 77157697 | 77157632 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77158003 | 77158092 | 77158003 | ID=MS.gene06366.t1.exon6;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77158003 | 77158092 | 77158003 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77158645 | 77158821 | 77158645 | ID=MS.gene06366.t1.exon7;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77158645 | 77158821 | 77158645 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
chr3.1 | exon | 77158905 | 77158937 | 77158905 | ID=MS.gene06366.t1.exon8;Parent=MS.gene06366.t1 |
chr3.1 | CDS | 77158905 | 77158937 | 77158905 | ID=cds.MS.gene06366.t1;Parent=MS.gene06366.t1 |
Gene Sequence |
Protein sequence |