AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049261

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049261.t1 MTR_3g096790 87.802 746 47 3 1 725 1 723 0.0 1029
MS.gene049261.t1 MTR_3g096790 92.105 608 44 1 122 725 53 660 0.0 872
MS.gene049261.t1 MTR_8g494210 72.513 382 88 4 350 725 531 901 1.39e-106 346
MS.gene049261.t1 MTR_8g494210 51.522 427 127 14 1 351 1 423 1.68e-82 281
MS.gene049261.t1 MTR_8g494210 49.754 406 124 14 1 330 1 402 8.73e-82 276
MS.gene049261.t1 MTR_8g494210 65.272 239 66 4 350 582 531 758 1.64e-14 77.8
MS.gene049261.t1 MTR_8g077150 47.330 412 148 11 346 725 1054 1428 7.53e-76 267
MS.gene049261.t1 MTR_8g077150 47.087 412 151 11 346 725 1054 1430 1.80e-74 263
MS.gene049261.t1 MTR_3g088495 59.322 236 88 4 495 725 277 509 1.63e-72 245
MS.gene049261.t1 MTR_1g022415 42.778 360 137 6 372 725 1061 1357 1.05e-62 228
MS.gene049261.t1 MTR_8g094000 58.451 142 49 2 78 216 67 201 5.50e-36 135
MS.gene049261.t1 MTR_3g088495 52.841 176 75 4 495 665 277 449 1.36e-35 141
MS.gene049261.t1 MTR_3g088495 52.841 176 75 4 495 665 277 449 1.54e-35 141
MS.gene049261.t1 MTR_3g111700 56.383 94 41 0 632 725 588 681 2.78e-31 130
MS.gene049261.t1 MTR_3g111700 56.383 94 41 0 632 725 584 677 3.12e-31 130
MS.gene049261.t1 MTR_2g049770 56.977 86 37 0 640 725 357 442 1.54e-27 117
MS.gene049261.t1 MTR_8g079472 52.326 86 41 0 640 725 365 450 6.47e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049261.t1 AT4G12780 56.395 344 135 6 396 725 550 892 2.11e-82 281
MS.gene049261.t1 AT4G12780 29.882 338 133 13 38 334 97 371 3.79e-20 96.3
MS.gene049261.t1 AT4G12770 54.354 333 106 7 436 725 548 877 2.69e-82 280
MS.gene049261.t1 AT4G12770 32.764 351 136 10 29 340 86 375 1.66e-26 116
MS.gene049261.t1 AT4G12780 56.395 344 135 6 396 725 523 865 3.01e-82 280
MS.gene049261.t1 AT4G12770 53.892 334 108 7 436 725 548 879 2.79e-81 278
MS.gene049261.t1 AT4G12770 32.764 351 136 10 29 340 86 375 1.66e-26 116
MS.gene049261.t1 AT4G12780 54.294 361 133 8 396 725 523 882 2.50e-78 270
MS.gene049261.t1 AT1G21660 52.542 236 105 3 490 725 283 511 1.74e-69 237
MS.gene049261.t1 AT4G36520 49.158 297 84 7 440 725 1171 1411 3.25e-63 230
MS.gene049261.t1 AT1G75310 42.433 337 135 7 389 725 1163 1440 6.44e-55 205
MS.gene049261.t1 AT1G75310 44.781 297 134 6 433 725 1167 1437 2.94e-51 194
MS.gene049261.t1 AT4G12780 56.863 255 93 7 396 635 550 802 4.16e-29 124
MS.gene049261.t1 AT4G12780 30.178 338 132 14 38 334 97 371 8.25e-20 95.1
MS.gene049261.t1 AT4G12780 56.863 255 93 7 396 635 523 775 6.04e-29 124
MS.gene049261.t1 AT4G12780 56.863 255 93 7 396 635 523 775 6.04e-29 124
MS.gene049261.t1 AT1G75100 46.729 107 57 0 619 725 533 639 3.57e-27 117
MS.gene049261.t1 AT1G30280 46.591 88 45 2 646 731 361 448 4.03e-20 94.4
MS.gene049261.t1 AT1G30280 46.512 86 45 1 646 730 361 446 4.90e-20 94.4

Find 189 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACACAGTTGTAGGTTTC+TGG 0.157218 3.3:+80077662 None:intergenic
TCCCTCAGCTGGAGAATTTC+AGG 0.198356 3.3:-80077464 MS.gene049261:CDS
CCCTTCTGCTGCACTTTATC+AGG 0.215143 3.3:+80075832 None:intergenic
TACAGCCGCTACTGTTAAAA+AGG 0.236113 3.3:-80075884 MS.gene049261:CDS
CAGCAGCTGCAGCTCTTTCT+CGG 0.239034 3.3:+80078400 None:intergenic
TTGTTATGTGTTCGTCTATC+AGG 0.263486 3.3:+80079164 None:intergenic
GAAAGATCATCAACAATATT+AGG 0.291136 3.3:+80077613 None:intergenic
AATTTACTAATCTCTTCTAA+TGG 0.298569 3.3:+80079404 None:intergenic
CCTCTGAAGGCTTTCCAATC+TGG 0.299584 3.3:+80077408 None:intergenic
CAGCAGCCTTCTCAGCTCTT+TGG 0.302766 3.3:+80078652 None:intergenic
GATGATTTGATCAATGGATT+TGG 0.304715 3.3:-80081247 MS.gene049261:CDS
TGAATGATGATCAGGTATTA+TGG 0.312370 3.3:-80075948 MS.gene049261:intron
CCTCAGATCATGACGATATA+TGG 0.313995 3.3:-80078962 MS.gene049261:CDS
CCTCAGCAGCAGCCCTTTCA+CGG 0.316110 3.3:+80078559 None:intergenic
AGCAGCTGCAGCTCTTTCTC+GGG 0.328646 3.3:+80078401 None:intergenic
TTAGAATCAGATGAATATTT+AGG 0.329043 3.3:+80079092 None:intergenic
TTCAATTGATTCTTTATCTC+TGG 0.335760 3.3:+80079205 None:intergenic
ATGATTTGATCAATGGATTT+GGG 0.344675 3.3:-80081246 MS.gene049261:CDS
CACAGGCCCACTCCTGATAT+TGG 0.347676 3.3:-80079548 MS.gene049261:intron
CGTTTATTAGCTACTGAATT+CGG 0.353480 3.3:-80081592 MS.gene049261:intron
ATTTACTAATCTCTTCTAAT+GGG 0.371043 3.3:+80079405 None:intergenic
TTGTGTTTGACCACGGTGTT+GGG 0.371244 3.3:+80079240 None:intergenic
GCAGAAATATATTGCAGAAA+AGG 0.382951 3.3:-80075797 MS.gene049261:CDS
TAAACGATCGAAATCGTTCA+TGG 0.387433 3.3:+80081609 None:intergenic
ATGTTTGAAGACACAGTTGT+AGG 0.389263 3.3:+80077655 None:intergenic
GATGATCTTCTCGGCGGATT+CGG 0.391097 3.3:-80081316 MS.gene049261:CDS
TAAAGAGGTTTATCATAAAC+AGG 0.396140 3.3:+80081370 None:intergenic
TCTGATGATGAACCAATATC+AGG 0.396642 3.3:+80079536 None:intergenic
GAAGTTAAGTGCTGGGCTGC+AGG 0.400986 3.3:-80076563 MS.gene049261:CDS
CTCAGCAGCAGCCCTTTCAC+GGG 0.403036 3.3:+80078560 None:intergenic
AACTCCTGATCATGTTCAAC+AGG 0.404831 3.3:+80079137 None:intergenic
GAGTTAGACCTAGGAGGCCT+TGG 0.407343 3.3:+80078303 None:intergenic
GAAGTTGAGAGAGGAAGTTT+TGG 0.413068 3.3:+80081501 None:intergenic
GTAGGTTTCTGGTTTACCTC+TGG 0.416290 3.3:+80077673 None:intergenic
CTGCTTCTCTCCTCTGACTT+GGG 0.419390 3.3:+80078852 None:intergenic
AGGGTCTTCTGTTGCATTGG+AGG 0.419847 3.3:+80079487 None:intergenic
CGAGGAGGAGGTGGTCTTGA+AGG 0.420028 3.3:+80078888 None:intergenic
ACTGCCTGCCAACCACATTC+AGG 0.420484 3.3:+80075925 None:intergenic
AGCTAGAGTGCGTGCTGAAA+GGG 0.423395 3.3:-80078610 MS.gene049261:CDS
GTTGCGTTTGATGATCTTCT+CGG 0.423406 3.3:-80081325 MS.gene049261:CDS
CTCAGTAACCACACCTTTGA+CGG 0.433699 3.3:+80081209 None:intergenic
GATAGTTCATCAAATTCTAA+TGG 0.437018 3.3:-80079356 MS.gene049261:CDS
ACTGCTTCTCTCCTCTGACT+TGG 0.437860 3.3:+80078851 None:intergenic
CCGTCATCGTCGTCGTAAAG+AGG 0.439814 3.3:+80081355 None:intergenic
TGACCACGGTGTTGGGGAAT+CGG 0.440553 3.3:+80079247 None:intergenic
CTGAAAGGGCCGCTGTTCAG+AGG 0.442095 3.3:-80078596 MS.gene049261:CDS
ACAGCGCTCCAAGGCCTCCT+AGG 0.442380 3.3:-80078311 MS.gene049261:CDS
CTGCTGCTGAGGCAAAGAAA+AGG 0.445504 3.3:-80078548 MS.gene049261:CDS
AAGAAGGGGAAGTAGGCATT+TGG 0.450918 3.3:+80079054 None:intergenic
AGGGCTGAAAAGGCTGCTGC+AGG 0.454335 3.3:-80078528 MS.gene049261:CDS
GACGGACATGGAAGTGAAAC+CGG 0.454335 3.3:+80081399 None:intergenic
AAACCATCATTAAAATAAGA+AGG 0.455056 3.3:+80079038 None:intergenic
AAGAATTGAAAGGGAAAGGA+AGG 0.455730 3.3:-80078781 MS.gene049261:CDS
GATTCCTGTTGAACATGATC+AGG 0.457157 3.3:-80079141 MS.gene049261:CDS
TGTGGAAAGGGCTGCTGCAG+AGG 0.458750 3.3:-80078424 MS.gene049261:CDS
TCCAAACTATGAAGAAAAGT+TGG 0.463054 3.3:-80078985 MS.gene049261:CDS
GTAGGCATTTGGCCAGCTAC+TGG 0.464119 3.3:+80079065 None:intergenic
TCAGAGAGGACTAGCAGATA+TGG 0.464943 3.3:-80079272 MS.gene049261:CDS
AAAAGGGTCTTCTGTTGCAT+TGG 0.465313 3.3:+80079484 None:intergenic
GAAGAGATCGGAATCATGAT+TGG 0.465418 3.3:+80081450 None:intergenic
ACCGGAGGTGCTACGAGAGA+TGG 0.465587 3.3:+80081417 None:intergenic
AAAGGCTGCTGCAGGGGAAA+AGG 0.465673 3.3:-80078520 MS.gene049261:CDS
TTTGGCCACAAATTCTTATG+TGG 0.466052 3.3:+80075649 None:intergenic
GAGAGCAAAGAAGAATTGAA+AGG 0.467658 3.3:-80078791 MS.gene049261:CDS
CACAAGCTGAAGCCCGTGAA+AGG 0.469852 3.3:-80078572 MS.gene049261:CDS
GGCAAAGAAAAGGGCTGAAA+AGG 0.470382 3.3:-80078538 MS.gene049261:CDS
CCGTGAAAGGGCTGCTGCTG+AGG 0.470897 3.3:-80078559 MS.gene049261:CDS
ATCATAAACAGGCGAGTTGA+CGG 0.471295 3.3:+80081381 None:intergenic
CCGTGGTCAAACACAAGTTC+AGG 0.471860 3.3:-80079233 MS.gene049261:CDS
GCTCCAACTGATTCATCCTC+AGG 0.479394 3.3:-80079440 MS.gene049261:CDS
GGAGAATTTCAGGAAGTTGA+AGG 0.481680 3.3:-80077454 MS.gene049261:CDS
ATATGTACTGGTCGAGGAGG+AGG 0.482183 3.3:+80078876 None:intergenic
GGAAAGAGAAAATGAAAGAC+AGG 0.482527 3.3:-80078727 MS.gene049261:CDS
TTAAAATAAGAAGGGGAAGT+AGG 0.484614 3.3:+80079047 None:intergenic
CGTTCTTCAGCGTGAGGGGA+AGG 0.485054 3.3:-80078338 MS.gene049261:CDS
AAGCTAGAGTGCGTGCTGAA+AGG 0.485213 3.3:-80078611 MS.gene049261:CDS
AGAGCAAAGAAGAATTGAAA+GGG 0.486134 3.3:-80078790 MS.gene049261:CDS
CCCATCTCTCGTAGCACCTC+CGG 0.486573 3.3:-80081418 MS.gene049261:CDS
AGAAAGGCGAAAAGCCAGAT+TGG 0.487061 3.3:-80077422 MS.gene049261:CDS
CTTGTGTTTGACCACGGTGT+TGG 0.489404 3.3:+80079239 None:intergenic
GTGCTGGGCTGCAGGGAAAG+AGG 0.491837 3.3:-80076555 MS.gene049261:CDS
TGCTGGGCTGCAGGGAAAGA+GGG 0.492188 3.3:-80076554 MS.gene049261:CDS
AAAGAAGAATTGAAAGGGAA+AGG 0.494666 3.3:-80078785 MS.gene049261:CDS
GAGAACAACAGAGACTTGAG+AGG 0.495826 3.3:-80078749 MS.gene049261:CDS
CTTAGTACATACATATTGTA+AGG 0.496733 3.3:+80076508 None:intergenic
AGGAGGCCTTGGAGCGCTGT+TGG 0.496898 3.3:+80078314 None:intergenic
TGGACTTTGAAGTTAAGTGC+TGG 0.497805 3.3:-80076571 MS.gene049261:CDS
AGAAAATGAAAGACAGGCTG+TGG 0.501628 3.3:-80078721 MS.gene049261:CDS
ATTGGAAGAGTGAAAGGATC+GGG 0.502219 3.3:+80081468 None:intergenic
GGGATTAGAATTGAAGAGAT+CGG 0.502447 3.3:+80081438 None:intergenic
CATATCTGCCCGAGAATTGA+CGG 0.506680 3.3:+80079010 None:intergenic
CGCGCTCCTGAGTCCTCTGA+AGG 0.507960 3.3:+80077395 None:intergenic
AAACCATGAGCAGCAGCAAA+AGG 0.509397 3.3:-80078826 MS.gene049261:CDS
GAGTTTCATCAAGCGCCATA+TGG 0.510705 3.3:-80079119 MS.gene049261:CDS
AACCATCATTAAAATAAGAA+GGG 0.510911 3.3:+80079039 None:intergenic
CTGTGTCTTCAAACATAAAG+AGG 0.511873 3.3:-80077648 MS.gene049261:CDS
TTTGAAGCATCTCCCTCAGC+TGG 0.511972 3.3:-80077475 MS.gene049261:intron
TGCTGCTGAGGCAAAGAAAA+GGG 0.513805 3.3:-80078547 MS.gene049261:CDS
TCAACAATATTAGGTGATGA+TGG 0.515248 3.3:+80077622 None:intergenic
CCGGAGGTGCTACGAGAGAT+GGG 0.515653 3.3:+80081418 None:intergenic
ACAAGCTGAAGCCCGTGAAA+GGG 0.521348 3.3:-80078571 MS.gene049261:CDS
GAATATTTAGGCATGCCATA+TGG 0.526400 3.3:+80079104 None:intergenic
TCTGCTCTCTTTGAGTCTGT+AGG 0.527874 3.3:+80076928 None:intergenic
TCTGACTTGGGAATATGTAC+TGG 0.528885 3.3:+80078864 None:intergenic
CTTCTAATGGGTCTGAAAAG+TGG 0.534760 3.3:+80079417 None:intergenic
TCAGAGGCTTGCGGAAACAC+TGG 0.536353 3.3:-80076591 MS.gene049261:intron
CAGAACGTGCTGCTGTGGAA+AGG 0.537152 3.3:-80078437 MS.gene049261:CDS
GAATTTCCAAGTCCATCAAA+AGG 0.540071 3.3:+80079311 None:intergenic
GGCTGAAAAGGCTGCTGCAG+GGG 0.540322 3.3:-80078526 MS.gene049261:CDS
TTTATACTAGGCAAAAGCAT+TGG 0.542110 3.3:-80076970 MS.gene049261:intron
ATCATGATTGGAAGAGTGAA+AGG 0.543443 3.3:+80081462 None:intergenic
ATTCGGTCATTCAAAGAAAA+CGG 0.544523 3.3:-80081299 MS.gene049261:CDS
ATGGCCTGAATGTGGTTGGC+AGG 0.545019 3.3:-80075929 MS.gene049261:CDS
TTGAAGGGGAAAGTGAAGAA+AGG 0.545134 3.3:-80077438 MS.gene049261:CDS
AGAACGTGCTGCTGTGGAAA+GGG 0.545428 3.3:-80078436 MS.gene049261:CDS
ATTGGCTGAGAAGAATCAAC+GGG 0.546286 3.3:-80076952 MS.gene049261:CDS
GGACTTTGAAGTTAAGTGCT+GGG 0.547078 3.3:-80076570 MS.gene049261:CDS
AGGCCACTGTTATCTACATG+TGG 0.555363 3.3:-80075676 MS.gene049261:CDS
GAGAATTTCAGGAAGTTGAA+GGG 0.556708 3.3:-80077453 MS.gene049261:CDS
GATTCTAATAAACCAGTAGC+TGG 0.557003 3.3:-80079077 MS.gene049261:CDS
AGCTCGCCAAAGAGCTGAGA+AGG 0.557004 3.3:-80078658 MS.gene049261:CDS
GAAGGTGGTGGAGCAGAAGT+TGG 0.558690 3.3:+80078906 None:intergenic
GGGCTGAAAAGGCTGCTGCA+GGG 0.559351 3.3:-80078527 MS.gene049261:CDS
TCCTGATAAAGTGCAGCAGA+AGG 0.559973 3.3:-80075833 MS.gene049261:CDS
AAGTTAAGTGCTGGGCTGCA+GGG 0.560083 3.3:-80076562 MS.gene049261:CDS
GCTGGGCTGCAGGGAAAGAG+GGG 0.560092 3.3:-80076553 MS.gene049261:CDS
TGTACTGGTCGAGGAGGAGG+TGG 0.561547 3.3:+80078879 None:intergenic
TCAGTAACCACACCTTTGAC+GGG 0.564015 3.3:+80081210 None:intergenic
TCCTGAAATTCTCCAGCTGA+GGG 0.565222 3.3:+80077463 None:intergenic
CCTCTTTACGACGACGATGA+CGG 0.565572 3.3:-80081355 MS.gene049261:CDS
TAAAGCAGAACGTGCTGCTG+TGG 0.566166 3.3:-80078442 MS.gene049261:CDS
TGGCCTGAGGATGAATCAGT+TGG 0.568887 3.3:+80079437 None:intergenic
TGAGCAGCAGCAAAAGGAGA+TGG 0.568955 3.3:-80078820 MS.gene049261:CDS
TGAAAGGGCCGCTGTTCAGA+GGG 0.569740 3.3:-80078595 MS.gene049261:CDS
ATGTGAATCGAAGTTGAGAG+AGG 0.572513 3.3:+80081492 None:intergenic
AACAGGCGAGTTGACGGACA+TGG 0.572944 3.3:+80081387 None:intergenic
GTTCTTCAGCGTGAGGGGAA+GGG 0.573829 3.3:-80078337 MS.gene049261:CDS
TGAATCGTTCTTCAGCGTGA+GGG 0.575605 3.3:-80078343 MS.gene049261:CDS
ATATCTGCCCGAGAATTGAC+GGG 0.576043 3.3:+80079011 None:intergenic
ATAGCAAGTCCTCCCGTCAA+AGG 0.576669 3.3:-80081222 MS.gene049261:intron
GTCCTCTCTGATGAAAATGC+TGG 0.577003 3.3:+80079284 None:intergenic
GATTGGAAGAGTGAAAGGAT+CGG 0.577344 3.3:+80081467 None:intergenic
GAAGGGCCAACAGCGCTCCA+AGG 0.577949 3.3:-80078320 MS.gene049261:CDS
GAGAAAGAGCTGCAGCTGCA+AGG 0.578548 3.3:-80078485 MS.gene049261:CDS
GGAGGTGGTCTTGAAGGTGG+TGG 0.579037 3.3:+80078894 None:intergenic
TTCCTGAAATTCTCCAGCTG+AGG 0.579563 3.3:+80077462 None:intergenic
GTGAAGAATGAGAGAGGTGT+CGG 0.580582 3.3:-80081277 MS.gene049261:CDS
GGAGGAGGTGGTCTTGAAGG+TGG 0.581949 3.3:+80078891 None:intergenic
AAAACGGTGAAGAATGAGAG+AGG 0.586394 3.3:-80081283 MS.gene049261:CDS
TGATGCACAATTTCAGCCAG+AGG 0.589144 3.3:-80077689 MS.gene049261:CDS
CCATATATCGTCATGATCTG+AGG 0.593418 3.3:+80078962 None:intergenic
TTGAATCGTTCTTCAGCGTG+AGG 0.593892 3.3:-80078344 MS.gene049261:CDS
GAATCGTTCTTCAGCGTGAG+GGG 0.594192 3.3:-80078342 MS.gene049261:CDS
ACCATCATTAAAATAAGAAG+GGG 0.596875 3.3:+80079040 None:intergenic
TTGGGAATATGTACTGGTCG+AGG 0.596893 3.3:+80078870 None:intergenic
GGCCACTGTTATCTACATGT+GGG 0.602583 3.3:-80075675 MS.gene049261:CDS
GGAAAGCCTTCAGAGGACTC+AGG 0.605059 3.3:-80077401 MS.gene049261:CDS
CATTGGCTGAGAAGAATCAA+CGG 0.608555 3.3:-80076953 MS.gene049261:CDS
AATATATTTCTGCTGAAGAG+TGG 0.620107 3.3:+80075807 None:intergenic
CCAGATTGGAAAGCCTTCAG+AGG 0.620112 3.3:-80077408 MS.gene049261:CDS
GATGAACCAATATCAGGAGT+GGG 0.623236 3.3:+80079542 None:intergenic
TCATGACGATATATGGCTAA+CGG 0.623870 3.3:-80078955 MS.gene049261:CDS
CCTGATAAAGTGCAGCAGAA+GGG 0.624350 3.3:-80075832 MS.gene049261:CDS
AGAATTTCAGGAAGTTGAAG+GGG 0.630146 3.3:-80077452 MS.gene049261:CDS
TGATGAACCAATATCAGGAG+TGG 0.633810 3.3:+80079541 None:intergenic
CTCACAGAAGAGTTAGACCT+AGG 0.635511 3.3:+80078294 None:intergenic
TGAGGATGAATCAGTTGGAG+CGG 0.639821 3.3:+80079442 None:intergenic
GGTCAAACACAAGTTCAGGT+TGG 0.644850 3.3:-80079229 MS.gene049261:CDS
GCAGCAGCAAAAGGAGATGG+AGG 0.644915 3.3:-80078817 MS.gene049261:CDS
TATTATGGCCTGAATGTGGT+TGG 0.649392 3.3:-80075933 MS.gene049261:CDS
AGCTTGTGCCCTCTGAACAG+CGG 0.653667 3.3:+80078587 None:intergenic
AGAACAACAGAGACTTGAGA+GGG 0.653891 3.3:-80078748 MS.gene049261:CDS
TGTGTTTGACCACGGTGTTG+GGG 0.654993 3.3:+80079241 None:intergenic
TGTGTCTTCAAACATAAAGA+GGG 0.655665 3.3:-80077647 MS.gene049261:CDS
GAGAAGATCATCAAACGCAA+CGG 0.656158 3.3:+80081327 None:intergenic
ACATTGATTTCAGAGGCTTG+CGG 0.656214 3.3:-80076600 MS.gene049261:intron
AGTACATATTCCCAAGTCAG+AGG 0.661965 3.3:-80078862 MS.gene049261:CDS
ACAGAAGAGTTAGACCTAGG+AGG 0.662653 3.3:+80078297 None:intergenic
TCAGAGGACTCAGGAGCGCG+CGG 0.665752 3.3:-80077392 MS.gene049261:intron
CCTGAACTTGTGTTTGACCA+CGG 0.670451 3.3:+80079233 None:intergenic
GGAATATGTACTGGTCGAGG+AGG 0.673478 3.3:+80078873 None:intergenic
GTAACCACACCTTTGACGGG+AGG 0.676329 3.3:+80081213 None:intergenic
CAGGTATTATGGCCTGAATG+TGG 0.679133 3.3:-80075937 MS.gene049261:CDS
AGTACATACATATTGTAAGG+TGG 0.690241 3.3:+80076511 None:intergenic
TGGGTCTGAAAAGTGGCCTG+AGG 0.703931 3.3:+80079424 None:intergenic
GCGTTTGATGATCTTCTCGG+CGG 0.720705 3.3:-80081322 MS.gene049261:CDS
AACCCACATGTAGATAACAG+TGG 0.744734 3.3:+80075673 None:intergenic
GGACATGGAAGTGAAACCGG+AGG 0.753671 3.3:+80081402 None:intergenic
GCACCGATTCCCCAACACCG+TGG 0.760752 3.3:-80079250 MS.gene049261:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGAGTTTTAAATAAAAA+AGG - chr3.3:80079422-80079441 MS.gene049261:CDS 10.0%
!!! AAAGAGTTTTAAATAAAAAA+GGG - chr3.3:80079423-80079442 MS.gene049261:CDS 10.0%
!!! AAATGTAATTAATTTTGTAT+AGG + chr3.3:80079318-80079337 None:intergenic 10.0%
!! AAACATTATTTATACTAAAG+CGG - chr3.3:80079014-80079033 MS.gene049261:CDS 15.0%
!! AAATAACATTAATGTTTCAT+TGG + chr3.3:80079184-80079203 None:intergenic 15.0%
!! ATAAGTTTAAACACAATTAT+CGG + chr3.3:80076529-80076548 None:intergenic 15.0%
!! ATATAATAATAGATAGCATA+AGG + chr3.3:80080817-80080836 None:intergenic 15.0%
!! CATTAATAATAAAAATGATG+GGG + chr3.3:80079070-80079089 None:intergenic 15.0%
!! GAAAGAATATTAAAAAAATC+TGG + chr3.3:80080863-80080882 None:intergenic 15.0%
!! GCATTAATAATAAAAATGAT+GGG + chr3.3:80079071-80079090 None:intergenic 15.0%
!! TGCATTAATAATAAAAATGA+TGG + chr3.3:80079072-80079091 None:intergenic 15.0%
!!! AAACTCTTTTAAAATAAAAG+TGG + chr3.3:80079412-80079431 None:intergenic 15.0%
!!! AAATGACAATTTAAAATTTG+AGG + chr3.3:80076583-80076602 None:intergenic 15.0%
!!! AATGCATTTTAGAATAATAA+CGG - chr3.3:80076502-80076521 MS.gene049261:intron 15.0%
!!! ATCATTTTTATTATTAATGC+AGG - chr3.3:80079071-80079090 MS.gene049261:CDS 15.0%
!!! CTGATTCAAATATTTTAAAA+GGG + chr3.3:80077806-80077825 None:intergenic 15.0%
!!! TTTTTCTTTTTAACAACTAA+TGG + chr3.3:80080150-80080169 None:intergenic 15.0%
!! AAACCATCATTAAAATAAGA+AGG + chr3.3:80078236-80078255 None:intergenic 20.0%
!! AAATAATGTTTATCAAGACA+TGG + chr3.3:80079005-80079024 None:intergenic 20.0%
!! AACCATCATTAAAATAAGAA+GGG + chr3.3:80078235-80078254 None:intergenic 20.0%
!! AACTAATACGTGAAAAATAA+GGG + chr3.3:80077657-80077676 None:intergenic 20.0%
!! AAGAGAGTAATAAATAGTTA+AGG + chr3.3:80079219-80079238 None:intergenic 20.0%
!! AATTTACTAATCTCTTCTAA+TGG + chr3.3:80077870-80077889 None:intergenic 20.0%
!! ACAAAATTGTCCTTAATAAA+TGG + chr3.3:80079272-80079291 None:intergenic 20.0%
!! AGAGAGTAATAAATAGTTAA+GGG + chr3.3:80079218-80079237 None:intergenic 20.0%
!! AGATTTGAATTGAAATCTTA+TGG - chr3.3:80077548-80077567 MS.gene049261:intron 20.0%
!! ATCAGGTAATTACTAAAATT+AGG - chr3.3:80081062-80081081 MS.gene049261:intron 20.0%
!! ATTTACTAATCTCTTCTAAT+GGG + chr3.3:80077869-80077888 None:intergenic 20.0%
!! TAAGTTTAAACACAATTATC+GGG + chr3.3:80076528-80076547 None:intergenic 20.0%
!! TAATTGTGTTTAAACTTATG+TGG - chr3.3:80076530-80076549 MS.gene049261:CDS 20.0%
!! TATGGATAACATATAAATAG+TGG + chr3.3:80081024-80081043 None:intergenic 20.0%
!! TATTCAAGGATAAAAGAATA+TGG + chr3.3:80076665-80076684 None:intergenic 20.0%
!! TCCAAAACATCATATAATTT+GGG - chr3.3:80079356-80079375 MS.gene049261:CDS 20.0%
!! TTAAAAACACTATAAGTTAC+TGG + chr3.3:80081249-80081268 None:intergenic 20.0%
!! TTAGAAAGAAATGTATAGAA+AGG + chr3.3:80081527-80081546 None:intergenic 20.0%
!! TTAGAATCAGATGAATATTT+AGG + chr3.3:80078182-80078201 None:intergenic 20.0%
!! TTGAATGTAATCATATTTGT+TGG - chr3.3:80076338-80076357 MS.gene049261:intron 20.0%
!! TTGAGTTCAAAATTGTAAAT+TGG + chr3.3:80079990-80080009 None:intergenic 20.0%
!!! AATTTTAGTAATTACCTGAT+TGG + chr3.3:80081062-80081081 None:intergenic 20.0%
!!! AGTAACTTATAGTGTTTTTA+AGG - chr3.3:80081248-80081267 MS.gene049261:CDS 20.0%
!!! ATATATTTTGAACATGCAAT+GGG + chr3.3:80080451-80080470 None:intergenic 20.0%
!!! CGTTTTAAATGTTAAAAGTT+TGG - chr3.3:80079481-80079500 MS.gene049261:CDS 20.0%
!!! CTTTTTGCTTATTATGTATT+TGG - chr3.3:80076931-80076950 MS.gene049261:CDS 20.0%
!!! GCTGATTCAAATATTTTAAA+AGG + chr3.3:80077807-80077826 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATAAT+AGG + chr3.3:80079209-80079228 None:intergenic 20.0%
!!! TATATATTTTGAACATGCAA+TGG + chr3.3:80080452-80080471 None:intergenic 20.0%
!!! TATTCTTTTATCCTTGAATA+TGG - chr3.3:80076665-80076684 MS.gene049261:intron 20.0%
!!! TCAGTGATTTAATTTTTGAA+CGG - chr3.3:80077237-80077256 MS.gene049261:intron 20.0%
!!! TGAAAGAGATAGTTTTTTAT+AGG + chr3.3:80080489-80080508 None:intergenic 20.0%
!!! TTTCTTTAAAAAAATGCTTG+AGG - chr3.3:80080837-80080856 MS.gene049261:intron 20.0%
! AAACATCATATAATTTGGGA+CGG - chr3.3:80079360-80079379 MS.gene049261:CDS 25.0%
! AAATGTTCCTATTTGACTAA+AGG + chr3.3:80077295-80077314 None:intergenic 25.0%
! AACTGAAAGAAAGAAAGAAA+TGG + chr3.3:80080185-80080204 None:intergenic 25.0%
! AATCATCCAACATAAAGATT+AGG + chr3.3:80080560-80080579 None:intergenic 25.0%
! AATGTTCCTATTTGACTAAA+GGG + chr3.3:80077294-80077313 None:intergenic 25.0%
! ACCATCATTAAAATAAGAAG+GGG + chr3.3:80078234-80078253 None:intergenic 25.0%
! AGTAGATCTTTCAAGAATAT+GGG - chr3.3:80077002-80077021 MS.gene049261:intron 25.0%
! ATATGTATGTACTAAGTACT+TGG - chr3.3:80080770-80080789 MS.gene049261:intron 25.0%
! ATTGTCCTTAATAAATGGTA+TGG + chr3.3:80079267-80079286 None:intergenic 25.0%
! CAACTAATACGTGAAAAATA+AGG + chr3.3:80077658-80077677 None:intergenic 25.0%
! CAATAACTTTCTTATTCCAT+AGG + chr3.3:80077501-80077520 None:intergenic 25.0%
! CTTAGTACATACATATTGTA+AGG + chr3.3:80080766-80080785 None:intergenic 25.0%
! CTTCAAACCATAAAAGAAAA+GGG + chr3.3:80079783-80079802 None:intergenic 25.0%
! CTTCTTAAATAAAAATGCAC+AGG + chr3.3:80077441-80077460 None:intergenic 25.0%
! GAAAGATCATCAACAATATT+AGG + chr3.3:80079661-80079680 None:intergenic 25.0%
! GATAGTTCATCAAATTCTAA+TGG - chr3.3:80077915-80077934 MS.gene049261:intron 25.0%
! GGAATAAGAATAATCGAAAA+GGG - chr3.3:80077621-80077640 MS.gene049261:CDS 25.0%
! GTCCAAAACATCATATAATT+TGG - chr3.3:80079355-80079374 MS.gene049261:CDS 25.0%
! TAAAGAGGTTTATCATAAAC+AGG + chr3.3:80075904-80075923 None:intergenic 25.0%
! TAGACAACTGAAATAAATCT+TGG - chr3.3:80077170-80077189 MS.gene049261:intron 25.0%
! TAGTAGATCTTTCAAGAATA+TGG - chr3.3:80077001-80077020 MS.gene049261:intron 25.0%
! TGGAAAATGCTTATACAATA+TGG + chr3.3:80081042-80081061 None:intergenic 25.0%
! TGTAAAGCGACTTATAATTT+GGG + chr3.3:80079158-80079177 None:intergenic 25.0%
! TTAACAAACATGAAGAGAAT+GGG - chr3.3:80077600-80077619 MS.gene049261:CDS 25.0%
! TTATCTGGTAGCTTATAAAA+CGG - chr3.3:80077474-80077493 MS.gene049261:intron 25.0%
! TTGTAAAGCGACTTATAATT+TGG + chr3.3:80079159-80079178 None:intergenic 25.0%
! TTGTCCTTAATAAATGGTAT+GGG + chr3.3:80079266-80079285 None:intergenic 25.0%
! TTTAACAAACATGAAGAGAA+TGG - chr3.3:80077599-80077618 MS.gene049261:CDS 25.0%
! TTTGATATCTTGAAAGTGAA+AGG - chr3.3:80080089-80080108 MS.gene049261:intron 25.0%
!! AAAAGCTTTTGGTGAAATAT+TGG - chr3.3:80076453-80076472 MS.gene049261:intron 25.0%
!! AACCATTACCTTTTTATACT+AGG - chr3.3:80080289-80080308 MS.gene049261:intron 25.0%
!! ATGATTTGATCAATGGATTT+GGG - chr3.3:80076025-80076044 MS.gene049261:intron 25.0%
!! CTAAAATTAGGTGCATTTTA+AGG - chr3.3:80081074-80081093 MS.gene049261:intron 25.0%
!! TCCCAAATTATATGATGTTT+TGG + chr3.3:80079360-80079379 None:intergenic 25.0%
!! TTCAATTGATTCTTTATCTC+TGG + chr3.3:80078069-80078088 None:intergenic 25.0%
!! TTTTCAATTCTTACAAGTGT+CGG + chr3.3:80076308-80076327 None:intergenic 25.0%
!!! AACTTATAGTGTTTTTAAGG+TGG - chr3.3:80081251-80081270 MS.gene049261:CDS 25.0%
!!! AGTGGATTTATCATTTTATC+TGG - chr3.3:80077459-80077478 MS.gene049261:CDS 25.0%
!!! AGTGTTTTGTTTATAGCTTA+AGG - chr3.3:80077376-80077395 MS.gene049261:intron 25.0%
!!! CATGTTTTATTATATAGTGC+AGG + chr3.3:80076706-80076725 None:intergenic 25.0%
!!! CTTTTCTTTTTATTTGTGAC+CGG - chr3.3:80080396-80080415 MS.gene049261:intron 25.0%
!!! GATCATTTTCATTTTTTTGC+TGG + chr3.3:80078907-80078926 None:intergenic 25.0%
!!! GATTTTGATGATTTGATCAA+TGG - chr3.3:80076018-80076037 MS.gene049261:intron 25.0%
!!! GTGCATTTTTATTTAAGAAG+TGG - chr3.3:80077441-80077460 MS.gene049261:CDS 25.0%
!!! GTGTTTTGTTTATAGCTTAA+GGG - chr3.3:80077377-80077396 MS.gene049261:intron 25.0%
!!! TTTTCTTTTTATTTGTGACC+GGG - chr3.3:80080397-80080416 MS.gene049261:intron 25.0%
!!! TTTTTGAATTGGTTCATCAT+TGG - chr3.3:80077262-80077281 MS.gene049261:intron 25.0%
AAACCATAAAAGAAAAGGGA+TGG + chr3.3:80079779-80079798 None:intergenic 30.0%
AAAGAAGAATTGAAAGGGAA+AGG - chr3.3:80078486-80078505 MS.gene049261:CDS 30.0%
AACACTAAGATCAATTTCGA+AGG + chr3.3:80076835-80076854 None:intergenic 30.0%
ACAACTGAAATAAATCTTGG+AGG - chr3.3:80077173-80077192 MS.gene049261:intron 30.0%
AGAGCAAAGAAGAATTGAAA+GGG - chr3.3:80078481-80078500 MS.gene049261:CDS 30.0%
AGATTACCACACAAAATGAT+AGG + chr3.3:80077071-80077090 None:intergenic 30.0%
AGCATCTTAAAGAAAAGAGT+TGG + chr3.3:80080210-80080229 None:intergenic 30.0%
AGGATACAAACAAACACATA+TGG + chr3.3:80077051-80077070 None:intergenic 30.0%
AGTACATACATATTGTAAGG+TGG + chr3.3:80080763-80080782 None:intergenic 30.0%
AGTGGAGGAATTTAAATTAC+TGG + chr3.3:80081006-80081025 None:intergenic 30.0%
ATAAAAACCGTGCAAATTAG+CGG + chr3.3:80080613-80080632 None:intergenic 30.0%
ATACGTGAAAAATAAGGGAT+CGG + chr3.3:80077652-80077671 None:intergenic 30.0%
ATCACAGTCAATTGAAATGA+AGG - chr3.3:80081150-80081169 MS.gene049261:intron 30.0%
ATTCGGTCATTCAAAGAAAA+CGG - chr3.3:80075972-80075991 MS.gene049261:intron 30.0%
CAAACATACCATTGTTTGAA+AGG - chr3.3:80077109-80077128 MS.gene049261:intron 30.0%
CAACATAAAGATTAGGAAGT+TGG + chr3.3:80080553-80080572 None:intergenic 30.0%
CAACTTCCTAATCTTTATGT+TGG - chr3.3:80080551-80080570 MS.gene049261:intron 30.0%
CAATTGAAAAATTGTCTGTG+AGG - chr3.3:80078081-80078100 MS.gene049261:intron 30.0%
CATAGACAAACAATTTGAAG+AGG + chr3.3:80080261-80080280 None:intergenic 30.0%
CGTTTATTAGCTACTGAATT+CGG - chr3.3:80075679-80075698 MS.gene049261:intron 30.0%
CTCATGAAGTTATAATGTGT+AGG + chr3.3:80077358-80077377 None:intergenic 30.0%
CTTTCCCATACCATTTATTA+AGG - chr3.3:80079259-80079278 MS.gene049261:CDS 30.0%
GCAATATACTGTTATTGATG+TGG - chr3.3:80079708-80079727 MS.gene049261:intron 30.0%
GCAGAAATATATTGCAGAAA+AGG - chr3.3:80081474-80081493 MS.gene049261:CDS 30.0%
GCAGAATATTATCTATTTGC+TGG - chr3.3:80076735-80076754 MS.gene049261:intron 30.0%
GCTTCAAACCATAAAAGAAA+AGG + chr3.3:80079784-80079803 None:intergenic 30.0%
GGATAACATATAAATAGTGG+AGG + chr3.3:80081021-80081040 None:intergenic 30.0%
GGGAATAAGAATAATCGAAA+AGG - chr3.3:80077620-80077639 MS.gene049261:CDS 30.0%
GTGTTGGGATAAAGAATAAA+GGG - chr3.3:80080031-80080050 MS.gene049261:intron 30.0%
TCAACAATATTAGGTGATGA+TGG + chr3.3:80079652-80079671 None:intergenic 30.0%
TCAATTGACTGTGATTGATT+TGG + chr3.3:80081145-80081164 None:intergenic 30.0%
TCCAAACTATGAAGAAAAGT+TGG - chr3.3:80078286-80078305 MS.gene049261:intron 30.0%
TCGAAATTGATCTTAGTGTT+TGG - chr3.3:80076835-80076854 MS.gene049261:intron 30.0%
TCTGTAATGCTTTGTCTATT+AGG - chr3.3:80077525-80077544 MS.gene049261:intron 30.0%
TGAATGATGATCAGGTATTA+TGG - chr3.3:80081323-80081342 MS.gene049261:CDS 30.0%
TGCCTAGTATAAAAAGGTAA+TGG + chr3.3:80080294-80080313 None:intergenic 30.0%
TGTACGAAAAACTGTATGTT+TGG - chr3.3:80076957-80076976 MS.gene049261:CDS 30.0%
TGTGTCTTCAAACATAAAGA+GGG - chr3.3:80079624-80079643 MS.gene049261:intron 30.0%
TGTTGGGATAAAGAATAAAG+GGG - chr3.3:80080032-80080051 MS.gene049261:intron 30.0%
TTAAAATAAGAAGGGGAAGT+AGG + chr3.3:80078227-80078246 None:intergenic 30.0%
TTAACTTATCGTTTCATCAC+AGG - chr3.3:80077706-80077725 MS.gene049261:intron 30.0%
TTAATTAAGAAGTTACGCTC+AGG + chr3.3:80076088-80076107 None:intergenic 30.0%
TTCTGTATCTCTTTACTTTC+AGG - chr3.3:80079549-80079568 MS.gene049261:intron 30.0%
TTGTGTTTAAACTTATGTGG+TGG - chr3.3:80076533-80076552 MS.gene049261:CDS 30.0%
! AAAGGTTTTCGATCTACTAA+AGG - chr3.3:80081492-80081511 MS.gene049261:CDS 30.0%
! AATATATTTCTGCTGAAGAG+TGG + chr3.3:80081467-80081486 None:intergenic 30.0%
! AGTGTTGGGATAAAGAATAA+AGG - chr3.3:80080030-80080049 MS.gene049261:intron 30.0%
! ATAAGCCTTTTTAACAGTAG+CGG + chr3.3:80081395-80081414 None:intergenic 30.0%
! ATGAAGGGTTTAAAAGCTTT+TGG - chr3.3:80076442-80076461 MS.gene049261:intron 30.0%
! ATGCAAAAAGTATGACTCTA+TGG + chr3.3:80079518-80079537 None:intergenic 30.0%
! ATTGATTCCTATAGAAGTGT+TGG - chr3.3:80080015-80080034 MS.gene049261:intron 30.0%
! GACTTATAATTTGTGACGTA+GGG + chr3.3:80079115-80079134 None:intergenic 30.0%
! GATGATCTTTCCTCAATTTT+TGG - chr3.3:80079670-80079689 MS.gene049261:intron 30.0%
! GATGATTTGATCAATGGATT+TGG - chr3.3:80076024-80076043 MS.gene049261:intron 30.0%
! GTGAAATATTGGTTAGAGAT+TGG - chr3.3:80076464-80076483 MS.gene049261:intron 30.0%
! TAACAACTAATGGATAGAGT+AGG + chr3.3:80080140-80080159 None:intergenic 30.0%
! TGACTTATAATTTGTGACGT+AGG + chr3.3:80079116-80079135 None:intergenic 30.0%
! TGCTTTTGCCTAGTATAAAA+AGG + chr3.3:80080300-80080319 None:intergenic 30.0%
! TGTATAAGCATTTTCCAATC+AGG - chr3.3:80081045-80081064 MS.gene049261:intron 30.0%
! TTGTATCCTATCATTTTGTG+TGG - chr3.3:80077062-80077081 MS.gene049261:intron 30.0%
! TTTATACTAGGCAAAAGCAT+TGG - chr3.3:80080301-80080320 MS.gene049261:intron 30.0%
! TTTCCATCCCTTTTCTTTTA+TGG - chr3.3:80079773-80079792 MS.gene049261:intron 30.0%
! TTTCGGTGTACATTAAATCA+CGG + chr3.3:80081192-80081211 None:intergenic 30.0%
! TTTGAACGGCATTTTTGAAT+TGG - chr3.3:80077251-80077270 MS.gene049261:intron 30.0%
!! AAAATGCATTGATTCTCCAA+TGG + chr3.3:80076492-80076511 None:intergenic 30.0%
!! ATGCTATATAGTTCTGATGA+AGG - chr3.3:80076426-80076445 MS.gene049261:intron 30.0%
!! CTTTTAAGAGGCTTTCATAT+AGG - chr3.3:80076629-80076648 MS.gene049261:intron 30.0%
!! TATCTACACATTGATTTCAG+AGG - chr3.3:80080664-80080683 MS.gene049261:intron 30.0%
!! TGCTATATAGTTCTGATGAA+GGG - chr3.3:80076427-80076446 MS.gene049261:intron 30.0%
!! TTGATTCCTATAGAAGTGTT+GGG - chr3.3:80080016-80080035 MS.gene049261:intron 30.0%
!!! CTTTTCTTTAAGATGCTAAC+TGG - chr3.3:80080213-80080232 MS.gene049261:intron 30.0%
!!! TCCCCTTCTTATTTTAATGA+TGG - chr3.3:80078230-80078249 MS.gene049261:intron 30.0%
AAATCTTGGAGGAGTTTGTA+AGG - chr3.3:80077184-80077203 MS.gene049261:intron 35.0%
AAGAATTGAAAGGGAAAGGA+AGG - chr3.3:80078490-80078509 MS.gene049261:CDS 35.0%
AATCCTACCTCCAAAAATTG+AGG + chr3.3:80079683-80079702 None:intergenic 35.0%
AATCTTGGAGGAGTTTGTAA+GGG - chr3.3:80077185-80077204 MS.gene049261:intron 35.0%
ACCATTGTTTGAAAGGTAAC+AGG - chr3.3:80077116-80077135 MS.gene049261:intron 35.0%
AGAATTTCAGGAAGTTGAAG+GGG - chr3.3:80079819-80079838 MS.gene049261:intron 35.0%
AGATTCACGAAGGAACATTT+CGG + chr3.3:80081209-80081228 None:intergenic 35.0%
ATCATGATTGGAAGAGTGAA+AGG + chr3.3:80075812-80075831 None:intergenic 35.0%
ATGAAAGCCTCTTAAAAGAC+AGG + chr3.3:80076627-80076646 None:intergenic 35.0%
ATGTTTGAAGACACAGTTGT+AGG + chr3.3:80079619-80079638 None:intergenic 35.0%
ATTTGCCGAACATTAAGAGT+TGG - chr3.3:80076881-80076900 MS.gene049261:intron 35.0%
CCAAACCAACTCTTAATGTT+CGG + chr3.3:80076889-80076908 None:intergenic 35.0%
CTGTGTCTTCAAACATAAAG+AGG - chr3.3:80079623-80079642 MS.gene049261:intron 35.0%
CTTGTGAACTTCCATATTCA+AGG + chr3.3:80076679-80076698 None:intergenic 35.0%
CTTTATCCCAACACTTCTAT+AGG + chr3.3:80080025-80080044 None:intergenic 35.0%
GAATATTTAGGCATGCCATA+TGG + chr3.3:80078170-80078189 None:intergenic 35.0%
GAATTTCCAAGTCCATCAAA+AGG + chr3.3:80077963-80077982 None:intergenic 35.0%
GAGAATTTCAGGAAGTTGAA+GGG - chr3.3:80079818-80079837 MS.gene049261:intron 35.0%
GAGAGCAAAGAAGAATTGAA+AGG - chr3.3:80078480-80078499 MS.gene049261:CDS 35.0%
GATCTCAAAAGTGGCTATAA+TGG - chr3.3:80076857-80076876 MS.gene049261:intron 35.0%
GATTCTAATAAACCAGTAGC+TGG - chr3.3:80078194-80078213 MS.gene049261:intron 35.0%
GCCAGTTGAAAATGATGATT+AGG - chr3.3:80081575-80081594 MS.gene049261:intron 35.0%
GGAAAGAGAAAATGAAAGAC+AGG - chr3.3:80078544-80078563 MS.gene049261:CDS 35.0%
GGGATTAGAATTGAAGAGAT+CGG + chr3.3:80075836-80075855 None:intergenic 35.0%
GTGTAGGTACAAGATTTCAT+TGG + chr3.3:80077342-80077361 None:intergenic 35.0%
GTTATCCTTGCAGTTAAACA+AGG - chr3.3:80076757-80076776 MS.gene049261:intron 35.0%
GTTGGATGATTGTGATTAGT+TGG - chr3.3:80080569-80080588 MS.gene049261:intron 35.0%
TACCTGATCATCATTCATGA+AGG + chr3.3:80081320-80081339 None:intergenic 35.0%
TAGCTTATAAAACGGACCTA+TGG - chr3.3:80077482-80077501 MS.gene049261:intron 35.0%
TAGTGTTTGGATCTCAAAAG+TGG - chr3.3:80076848-80076867 MS.gene049261:intron 35.0%
TATCAATAAACCTCAACCTC+AGG + chr3.3:80076251-80076270 None:intergenic 35.0%
TCATCATCATCATCATCCAA+AGG - chr3.3:80075733-80075752 MS.gene049261:intron 35.0%
TCATGACGATATATGGCTAA+CGG - chr3.3:80078316-80078335 MS.gene049261:CDS 35.0%
TGAAAGCCTCTTAAAAGACA+GGG + chr3.3:80076626-80076645 None:intergenic 35.0%
TGCAGTTAAACAAGGAATAC+TGG - chr3.3:80076765-80076784 MS.gene049261:intron 35.0%
TTAAACGAAATGCGATGCTT+AGG + chr3.3:80077584-80077603 None:intergenic 35.0%
TTGTTATGTGTTCGTCTATC+AGG + chr3.3:80078110-80078129 None:intergenic 35.0%
! AAGGGTTCTTATTTCAGTAG+TGG - chr3.3:80077395-80077414 MS.gene049261:CDS 35.0%
! ATCATATAATTTGGGACGGA+GGG - chr3.3:80079364-80079383 MS.gene049261:CDS 35.0%
! CTATAAGTTACTGGAGTGTT+TGG + chr3.3:80081240-80081259 None:intergenic 35.0%
! GAAGTTGGTTGTGTAAAAAG+AGG + chr3.3:80078353-80078372 None:intergenic 35.0%
! GATGATACTGATCCTTTTGA+TGG - chr3.3:80077948-80077967 MS.gene049261:intron 35.0%
! GATGATGATGATGATGACAT+TGG + chr3.3:80075730-80075749 None:intergenic 35.0%
! GCCAACTTTTCTTCATAGTT+TGG + chr3.3:80078290-80078309 None:intergenic 35.0%
! GCCTAATCATCATTTTCAAC+TGG + chr3.3:80081579-80081598 None:intergenic 35.0%
! GTATTCCTTGTTTAACTGCA+AGG + chr3.3:80076765-80076784 None:intergenic 35.0%
! TATAGCATCGAAACTTCTGA+TGG + chr3.3:80076414-80076433 None:intergenic 35.0%
! TCTGATGATGAACCAATATC+AGG + chr3.3:80077738-80077757 None:intergenic 35.0%
! TTGAATTGGTTCATCATTGG+TGG - chr3.3:80077265-80077284 MS.gene049261:intron 35.0%
! TTTGCTTGCATTTGAAGCAA+CGG - chr3.3:80076186-80076205 MS.gene049261:intron 35.0%
!! AACATTAAGAGTTGGTTTGG+AGG - chr3.3:80076889-80076908 MS.gene049261:intron 35.0%
!! ACATTAAGAGTTGGTTTGGA+GGG - chr3.3:80076890-80076909 MS.gene049261:intron 35.0%
!! AGAGGAAGTTTTGGTGAAAT+TGG + chr3.3:80075764-80075783 None:intergenic 35.0%
!! GATCTTTCCTCAATTTTTGG+AGG - chr3.3:80079673-80079692 MS.gene049261:intron 35.0%
!! TAACTCTTGGCTTTGATGTT+TGG - chr3.3:80079038-80079057 MS.gene049261:CDS 35.0%
!! TTTCCTCAATTTTTGGAGGT+AGG - chr3.3:80079677-80079696 MS.gene049261:intron 35.0%
!! TTTTTGGAGGTAGGATTTTG+TGG - chr3.3:80079686-80079705 MS.gene049261:intron 35.0%
!!! TAGTGGATTTTTCTTCTCAG+CGG - chr3.3:80077412-80077431 MS.gene049261:CDS 35.0%
AAAACGGTGAAGAATGAGAG+AGG - chr3.3:80075988-80076007 MS.gene049261:intron 40.0%
AAAAGGGTCTTCTGTTGCAT+TGG + chr3.3:80077790-80077809 None:intergenic 40.0%
AACCCACATGTAGATAACAG+TGG + chr3.3:80081601-80081620 None:intergenic 40.0%
AACTCCTGATCATGTTCAAC+AGG + chr3.3:80078137-80078156 None:intergenic 40.0%
AAGACACAGTTGTAGGTTTC+TGG + chr3.3:80079612-80079631 None:intergenic 40.0%
AAGTACTTGGTATAATGCCC+AGG - chr3.3:80080783-80080802 MS.gene049261:intron 40.0%
AGAAAATGAAAGACAGGCTG+TGG - chr3.3:80078550-80078569 MS.gene049261:CDS 40.0%
AGAACAACAGAGACTTGAGA+GGG - chr3.3:80078523-80078542 MS.gene049261:CDS 40.0%
AGACAGGGAATGCATGATAT+CGG + chr3.3:80076611-80076630 None:intergenic 40.0%
AGCAATGAGGTGATTAGATG+AGG + chr3.3:80080891-80080910 None:intergenic 40.0%
AGTACATATTCCCAAGTCAG+AGG - chr3.3:80078409-80078428 MS.gene049261:CDS 40.0%
AGTACTTGGTATAATGCCCA+GGG - chr3.3:80080784-80080803 MS.gene049261:intron 40.0%
ATACTAAAGCGGCTAACTCT+TGG - chr3.3:80079025-80079044 MS.gene049261:CDS 40.0%
ATCTTGGAGGAGTTTGTAAG+GGG - chr3.3:80077186-80077205 MS.gene049261:intron 40.0%
ATGTGAATCGAAGTTGAGAG+AGG + chr3.3:80075782-80075801 None:intergenic 40.0%
ATTGGAAGAGTGAAAGGATC+GGG + chr3.3:80075806-80075825 None:intergenic 40.0%
ATTGGCTGAGAAGAATCAAC+GGG - chr3.3:80080319-80080338 MS.gene049261:intron 40.0%
CATAGCCTTCACTAGATCAT+AGG + chr3.3:80076215-80076234 None:intergenic 40.0%
CATTGTCCACTTATATCCCT+AGG + chr3.3:80080920-80080939 None:intergenic 40.0%
CCATATATCGTCATGATCTG+AGG + chr3.3:80078312-80078331 None:intergenic 40.0%
CCTCAGATCATGACGATATA+TGG - chr3.3:80078309-80078328 MS.gene049261:CDS 40.0%
CTCCTTCATGAATGATGATC+AGG - chr3.3:80081315-80081334 MS.gene049261:CDS 40.0%
CTGACACAGATGCATGTATT+GGG + chr3.3:80080520-80080539 None:intergenic 40.0%
CTTCTGATGGAAGACATGTT+TGG + chr3.3:80076401-80076420 None:intergenic 40.0%
GAAGAGATCGGAATCATGAT+TGG + chr3.3:80075824-80075843 None:intergenic 40.0%
GAATAAAGGGGAGTTAGAGA+AGG - chr3.3:80080044-80080063 MS.gene049261:intron 40.0%
GAGAAGATCATCAAACGCAA+CGG + chr3.3:80075947-80075966 None:intergenic 40.0%
GATGAACCAATATCAGGAGT+GGG + chr3.3:80077732-80077751 None:intergenic 40.0%
GATTCCTGTTGAACATGATC+AGG - chr3.3:80078130-80078149 MS.gene049261:intron 40.0%
GATTGGAAGAGTGAAAGGAT+CGG + chr3.3:80075807-80075826 None:intergenic 40.0%
GCCTGTTACCTTTCAAACAA+TGG + chr3.3:80077120-80077139 None:intergenic 40.0%
GGAGAATTTCAGGAAGTTGA+AGG - chr3.3:80079817-80079836 MS.gene049261:intron 40.0%
GGTGAAATTGGAAGATCCTT+TGG + chr3.3:80075752-80075771 None:intergenic 40.0%
TAATCTACTGACGACATTGC+AGG + chr3.3:80076791-80076810 None:intergenic 40.0%
TACAGCCGCTACTGTTAAAA+AGG - chr3.3:80081387-80081406 MS.gene049261:CDS 40.0%
TACTACAGTGCTCTGTAAAG+AGG + chr3.3:80081109-80081128 None:intergenic 40.0%
TATTATGGCCTGAATGTGGT+TGG - chr3.3:80081338-80081357 MS.gene049261:CDS 40.0%
TGATGAACCAATATCAGGAG+TGG + chr3.3:80077733-80077752 None:intergenic 40.0%
TGGACTCCCTTTAGTCAAAT+AGG - chr3.3:80077285-80077304 MS.gene049261:intron 40.0%
TGGTTGCCTTCCTTTACTAT+TGG + chr3.3:80079970-80079989 None:intergenic 40.0%
TTGAAGGGGAAAGTGAAGAA+AGG - chr3.3:80079833-80079852 MS.gene049261:intron 40.0%
! ATCATAAACAGGCGAGTTGA+CGG + chr3.3:80075893-80075912 None:intergenic 40.0%
! ATGTGGTGGAGACACATAAT+TGG - chr3.3:80076547-80076566 MS.gene049261:CDS 40.0%
! CATATTTGTTGGTGTCTTGC+CGG - chr3.3:80076349-80076368 MS.gene049261:intron 40.0%
! CATCATATAATTTGGGACGG+AGG - chr3.3:80079363-80079382 MS.gene049261:CDS 40.0%
! CATTGGCTGAGAAGAATCAA+CGG - chr3.3:80080318-80080337 MS.gene049261:intron 40.0%
! CCGAACATTAAGAGTTGGTT+TGG - chr3.3:80076886-80076905 MS.gene049261:intron 40.0%
! CTTCTAATGGGTCTGAAAAG+TGG + chr3.3:80077857-80077876 None:intergenic 40.0%
! GAAGTTGAGAGAGGAAGTTT+TGG + chr3.3:80075773-80075792 None:intergenic 40.0%
! GAATTCGGTTTGAAACCTCA+AGG - chr3.3:80075694-80075713 MS.gene049261:intron 40.0%
! GTTGCGTTTGATGATCTTCT+CGG - chr3.3:80075946-80075965 MS.gene049261:intron 40.0%
! TACCAGCATTTTCATCAGAG+AGG - chr3.3:80077985-80078004 MS.gene049261:intron 40.0%
! TGCATTCCCTGTCTTTTAAG+AGG - chr3.3:80076617-80076636 MS.gene049261:intron 40.0%
! TTTTAGACCCGTCAATTCTC+GGG - chr3.3:80078253-80078272 MS.gene049261:intron 40.0%
!! ACATTGATTTCAGAGGCTTG+CGG - chr3.3:80080671-80080690 MS.gene049261:intron 40.0%
!! GGACTTTGAAGTTAAGTGCT+GGG - chr3.3:80080701-80080720 MS.gene049261:intron 40.0%
!! GTTTTAGACCCGTCAATTCT+CGG - chr3.3:80078252-80078271 MS.gene049261:intron 40.0%
!! TCTGACTTGGGAATATGTAC+TGG + chr3.3:80078410-80078429 None:intergenic 40.0%
!! TCTTTTTATTTGTGACCGGG+TGG - chr3.3:80080400-80080419 MS.gene049261:intron 40.0%
!! TGGACTTTGAAGTTAAGTGC+TGG - chr3.3:80080700-80080719 MS.gene049261:intron 40.0%
!!! ACTGATCCTTTTGATGGACT+TGG - chr3.3:80077954-80077973 MS.gene049261:intron 40.0%
AAACCATGAGCAGCAGCAAA+AGG - chr3.3:80078445-80078464 MS.gene049261:CDS 45.0%
AAGAAGGGGAAGTAGGCATT+TGG + chr3.3:80078220-80078239 None:intergenic 45.0%
ACAGAAGAGTTAGACCTAGG+AGG + chr3.3:80078977-80078996 None:intergenic 45.0%
AGAAAGGCGAAAAGCCAGAT+TGG - chr3.3:80079849-80079868 MS.gene049261:intron 45.0%
AGGAGAGAGTCTCTTCTCTA+AGG + chr3.3:80080120-80080139 None:intergenic 45.0%
AGGCCACTGTTATCTACATG+TGG - chr3.3:80081595-80081614 MS.gene049261:CDS 45.0%
ATATCTGCCCGAGAATTGAC+GGG + chr3.3:80078263-80078282 None:intergenic 45.0%
ATGTAGTGAGACTGAACCTG+AGG - chr3.3:80076232-80076251 MS.gene049261:intron 45.0%
ATTGGTGCAGATTTGCCTTG+AGG + chr3.3:80075712-80075731 None:intergenic 45.0%
CAGGTATTATGGCCTGAATG+TGG - chr3.3:80081334-80081353 MS.gene049261:CDS 45.0%
CATATCTGCCCGAGAATTGA+CGG + chr3.3:80078264-80078283 None:intergenic 45.0%
CCAATACATGCATCTGTGTC+AGG - chr3.3:80080518-80080537 MS.gene049261:intron 45.0%
CCACTTATATCCCTAGGAGT+AGG + chr3.3:80080914-80080933 None:intergenic 45.0%
CCTACTCCTAGGGATATAAG+TGG - chr3.3:80080911-80080930 MS.gene049261:intron 45.0%
CCTGAACTTGTGTTTGACCA+CGG + chr3.3:80078041-80078060 None:intergenic 45.0%
CCTGACACAGATGCATGTAT+TGG + chr3.3:80080521-80080540 None:intergenic 45.0%
CCTGATAAAGTGCAGCAGAA+GGG - chr3.3:80081439-80081458 MS.gene049261:CDS 45.0%
CTCACAGAAGAGTTAGACCT+AGG + chr3.3:80078980-80078999 None:intergenic 45.0%
CTCAGTAACCACACCTTTGA+CGG + chr3.3:80076065-80076084 None:intergenic 45.0%
GAGAACAACAGAGACTTGAG+AGG - chr3.3:80078522-80078541 MS.gene049261:CDS 45.0%
GAGTTTCATCAAGCGCCATA+TGG - chr3.3:80078152-80078171 MS.gene049261:intron 45.0%
GGCAAAGAAAAGGGCTGAAA+AGG - chr3.3:80078733-80078752 MS.gene049261:CDS 45.0%
GGCCACTGTTATCTACATGT+GGG - chr3.3:80081596-80081615 MS.gene049261:CDS 45.0%
GGTAGCCTATGATCTAGTGA+AGG - chr3.3:80076207-80076226 MS.gene049261:intron 45.0%
GGTCAAACACAAGTTCAGGT+TGG - chr3.3:80078042-80078061 MS.gene049261:intron 45.0%
GTCCTCTCTGATGAAAATGC+TGG + chr3.3:80077990-80078009 None:intergenic 45.0%
GTGCAAATTAGCGGAGAACT+CGG + chr3.3:80080604-80080623 None:intergenic 45.0%
TCAGTAACCACACCTTTGAC+GGG + chr3.3:80076064-80076083 None:intergenic 45.0%
TCATTCGCTCTGCTCATTAC+AGG - chr3.3:80080975-80080994 MS.gene049261:intron 45.0%
TCCTGAAATTCTCCAGCTGA+GGG + chr3.3:80079811-80079830 None:intergenic 45.0%
TCCTGATAAAGTGCAGCAGA+AGG - chr3.3:80081438-80081457 MS.gene049261:CDS 45.0%
TCTGCTCTCTTTGAGTCTGT+AGG + chr3.3:80080346-80080365 None:intergenic 45.0%
TGAATCGTTCTTCAGCGTGA+GGG - chr3.3:80078928-80078947 MS.gene049261:CDS 45.0%
TGAGGATGAATCAGTTGGAG+CGG + chr3.3:80077832-80077851 None:intergenic 45.0%
TGATGCACAATTTCAGCCAG+AGG - chr3.3:80079582-80079601 MS.gene049261:intron 45.0%
TGCTGCTGAGGCAAAGAAAA+GGG - chr3.3:80078724-80078743 MS.gene049261:CDS 45.0%
TTCCTGAAATTCTCCAGCTG+AGG + chr3.3:80079812-80079831 None:intergenic 45.0%
TTGAATCGTTCTTCAGCGTG+AGG - chr3.3:80078927-80078946 MS.gene049261:CDS 45.0%
TTGTGTTTGACCACGGTGTT+GGG + chr3.3:80078034-80078053 None:intergenic 45.0%
! GAGTTCTCCGCTAATTTGCA+CGG - chr3.3:80080603-80080622 MS.gene049261:intron 45.0%
! GGAGTTTGTAAGGGGTACAT+AGG - chr3.3:80077194-80077213 MS.gene049261:intron 45.0%
! GTGAAGAATGAGAGAGGTGT+CGG - chr3.3:80075994-80076013 MS.gene049261:intron 45.0%
! TCAGAGAGGACTAGCAGATA+TGG - chr3.3:80077999-80078018 MS.gene049261:intron 45.0%
! TGGTTAGAGATTGGCTCCAT+TGG - chr3.3:80076473-80076492 MS.gene049261:intron 45.0%
! TTGGGAATATGTACTGGTCG+AGG + chr3.3:80078404-80078423 None:intergenic 45.0%
!! GTAGGTTTCTGGTTTACCTC+TGG + chr3.3:80079601-80079620 None:intergenic 45.0%
AAGCTAGAGTGCGTGCTGAA+AGG - chr3.3:80078660-80078679 MS.gene049261:CDS 50.0%
ACAAGCTGAAGCCCGTGAAA+GGG - chr3.3:80078700-80078719 MS.gene049261:CDS 50.0%
ACCTCATTGCTCCTACTCCT+AGG - chr3.3:80080900-80080919 MS.gene049261:intron 50.0%
ACTGCTTCTCTCCTCTGACT+TGG + chr3.3:80078423-80078442 None:intergenic 50.0%
AGCATAAGGCAGCAAACCCT+GGG + chr3.3:80080803-80080822 None:intergenic 50.0%
AGCTAGAGTGCGTGCTGAAA+GGG - chr3.3:80078661-80078680 MS.gene049261:CDS 50.0%
AGGGTCTTCTGTTGCATTGG+AGG + chr3.3:80077787-80077806 None:intergenic 50.0%
ATAGCAAGTCCTCCCGTCAA+AGG - chr3.3:80076049-80076068 MS.gene049261:intron 50.0%
CACGTGTCAGTGTCAAACAC+CGG + chr3.3:80076371-80076390 None:intergenic 50.0%
CCAGATTGGAAAGCCTTCAG+AGG - chr3.3:80079863-80079882 MS.gene049261:intron 50.0%
CCCTTCTGCTGCACTTTATC+AGG + chr3.3:80081442-80081461 None:intergenic 50.0%
CCGTGGTCAAACACAAGTTC+AGG - chr3.3:80078038-80078057 MS.gene049261:intron 50.0%
CCTCATTGCTCCTACTCCTA+GGG - chr3.3:80080901-80080920 MS.gene049261:intron 50.0%
CCTCTTTACGACGACGATGA+CGG - chr3.3:80075916-80075935 MS.gene049261:CDS 50.0%
CTGCTGCTGAGGCAAAGAAA+AGG - chr3.3:80078723-80078742 MS.gene049261:CDS 50.0%
CTGCTTCTCTCCTCTGACTT+GGG + chr3.3:80078422-80078441 None:intergenic 50.0%
CTGTATGAGCAGAAACCACC+CGG + chr3.3:80080418-80080437 None:intergenic 50.0%
CTTGTGTTTGACCACGGTGT+TGG + chr3.3:80078035-80078054 None:intergenic 50.0%
GAATCGTTCTTCAGCGTGAG+GGG - chr3.3:80078929-80078948 MS.gene049261:CDS 50.0%
GACGGACATGGAAGTGAAAC+CGG + chr3.3:80075875-80075894 None:intergenic 50.0%
GGCTGCTTCAAGATTCACGA+AGG + chr3.3:80081219-80081238 None:intergenic 50.0%
TAGCATAAGGCAGCAAACCC+TGG + chr3.3:80080804-80080823 None:intergenic 50.0%
TCCCTCAGCTGGAGAATTTC+AGG - chr3.3:80079807-80079826 MS.gene049261:intron 50.0%
TGAGACTGAACCTGAGGTTG+AGG - chr3.3:80076238-80076257 MS.gene049261:intron 50.0%
TGAGCAGCAGCAAAAGGAGA+TGG - chr3.3:80078451-80078470 MS.gene049261:CDS 50.0%
TGGCCTGAGGATGAATCAGT+TGG + chr3.3:80077837-80077856 None:intergenic 50.0%
! AGAACGTGCTGCTGTGGAAA+GGG - chr3.3:80078835-80078854 MS.gene049261:CDS 50.0%
! ATATGTACTGGTCGAGGAGG+AGG + chr3.3:80078398-80078417 None:intergenic 50.0%
! CCTCTGAAGGCTTTCCAATC+TGG + chr3.3:80079866-80079885 None:intergenic 50.0%
! GATGATCTTCTCGGCGGATT+CGG - chr3.3:80075955-80075974 MS.gene049261:intron 50.0%
! GCGTTTGATGATCTTCTCGG+CGG - chr3.3:80075949-80075968 MS.gene049261:intron 50.0%
! GCTCCAACTGATTCATCCTC+AGG - chr3.3:80077831-80077850 MS.gene049261:intron 50.0%
! GGAATATGTACTGGTCGAGG+AGG + chr3.3:80078401-80078420 None:intergenic 50.0%
! TAAAGCAGAACGTGCTGCTG+TGG - chr3.3:80078829-80078848 MS.gene049261:CDS 50.0%
! TCTCCTTTTGCTGCTGCTCA+TGG + chr3.3:80078451-80078470 None:intergenic 50.0%
! TGTAAGGGGTACATAGGCAC+TGG - chr3.3:80077200-80077219 MS.gene049261:intron 50.0%
! TGTGTTTGACCACGGTGTTG+GGG + chr3.3:80078033-80078052 None:intergenic 50.0%
! TTTGAAGCATCTCCCTCAGC+TGG - chr3.3:80079796-80079815 MS.gene049261:intron 50.0%
!! AAGTTAAGTGCTGGGCTGCA+GGG - chr3.3:80080709-80080728 MS.gene049261:intron 50.0%
!! GAGTTGGTTTGGAGGGAAAG+AGG - chr3.3:80076897-80076916 MS.gene049261:intron 50.0%
AAAGGCTGCTGCAGGGGAAA+AGG - chr3.3:80078751-80078770 MS.gene049261:CDS 55.0%
AAGTCCTCCCGTCAAAGGTG+TGG - chr3.3:80076054-80076073 MS.gene049261:intron 55.0%
ACTGCCTGCCAACCACATTC+AGG + chr3.3:80081349-80081368 None:intergenic 55.0%
AGCAGCTGCAGCTCTTTCTC+GGG + chr3.3:80078873-80078892 None:intergenic 55.0%
AGCTCGCCAAAGAGCTGAGA+AGG - chr3.3:80078613-80078632 MS.gene049261:CDS 55.0%
AGCTTGTGCCCTCTGAACAG+CGG + chr3.3:80078687-80078706 None:intergenic 55.0%
ATGGCCTGAATGTGGTTGGC+AGG - chr3.3:80081342-80081361 MS.gene049261:CDS 55.0%
CACAAGCTGAAGCCCGTGAA+AGG - chr3.3:80078699-80078718 MS.gene049261:CDS 55.0%
CACAGGCCCACTCCTGATAT+TGG - chr3.3:80077723-80077742 MS.gene049261:intron 55.0%
CAGCAGCCTTCTCAGCTCTT+TGG + chr3.3:80078622-80078641 None:intergenic 55.0%
CAGCAGCTGCAGCTCTTTCT+CGG + chr3.3:80078874-80078893 None:intergenic 55.0%
CCCTAGGAGTAGGAGCAATG+AGG + chr3.3:80080904-80080923 None:intergenic 55.0%
CCGTCATCGTCGTCGTAAAG+AGG + chr3.3:80075919-80075938 None:intergenic 55.0%
GAGAAAGAGCTGCAGCTGCA+AGG - chr3.3:80078786-80078805 MS.gene049261:CDS 55.0%
GAGTTAGACCTAGGAGGCCT+TGG + chr3.3:80078971-80078990 None:intergenic 55.0%
GCAGCAGCAAAAGGAGATGG+AGG - chr3.3:80078454-80078473 MS.gene049261:CDS 55.0%
GGAAAGCCTTCAGAGGACTC+AGG - chr3.3:80079870-80079889 MS.gene049261:intron 55.0%
GGACATGGAAGTGAAACCGG+AGG + chr3.3:80075872-80075891 None:intergenic 55.0%
GTAACCACACCTTTGACGGG+AGG + chr3.3:80076061-80076080 None:intergenic 55.0%
GTAGGCATTTGGCCAGCTAC+TGG + chr3.3:80078209-80078228 None:intergenic 55.0%
GTTCTTCAGCGTGAGGGGAA+GGG - chr3.3:80078934-80078953 MS.gene049261:CDS 55.0%
TCAGAGGCTTGCGGAAACAC+TGG - chr3.3:80080680-80080699 MS.gene049261:intron 55.0%
TGAAAGGGCCGCTGTTCAGA+GGG - chr3.3:80078676-80078695 MS.gene049261:CDS 55.0%
TGGGTCTGAAAAGTGGCCTG+AGG + chr3.3:80077850-80077869 None:intergenic 55.0%
! AACAGGCGAGTTGACGGACA+TGG + chr3.3:80075887-80075906 None:intergenic 55.0%
! CAGAACGTGCTGCTGTGGAA+AGG - chr3.3:80078834-80078853 MS.gene049261:CDS 55.0%
! TGACCACGGTGTTGGGGAAT+CGG + chr3.3:80078027-80078046 None:intergenic 55.0%
!! CAAGTGTCGGCGTGTGAGTA+TGG + chr3.3:80076295-80076314 None:intergenic 55.0%
!! GAAGGTGGTGGAGCAGAAGT+TGG + chr3.3:80078368-80078387 None:intergenic 55.0%
!! GAAGTTAAGTGCTGGGCTGC+AGG - chr3.3:80080708-80080727 MS.gene049261:intron 55.0%
AGGGCTGAAAAGGCTGCTGC+AGG - chr3.3:80078743-80078762 MS.gene049261:CDS 60.0%
CCCATCTCTCGTAGCACCTC+CGG - chr3.3:80075853-80075872 MS.gene049261:CDS 60.0%
CCTCAGCAGCAGCCCTTTCA+CGG + chr3.3:80078715-80078734 None:intergenic 60.0%
CGTTCTTCAGCGTGAGGGGA+AGG - chr3.3:80078933-80078952 MS.gene049261:CDS 60.0%
CTCAGCAGCAGCCCTTTCAC+GGG + chr3.3:80078714-80078733 None:intergenic 60.0%
CTGAAAGGGCCGCTGTTCAG+AGG - chr3.3:80078675-80078694 MS.gene049261:CDS 60.0%
GGCTGAAAAGGCTGCTGCAG+GGG - chr3.3:80078745-80078764 MS.gene049261:CDS 60.0%
GGGCTGAAAAGGCTGCTGCA+GGG - chr3.3:80078744-80078763 MS.gene049261:CDS 60.0%
TGCTGGGCTGCAGGGAAAGA+GGG - chr3.3:80080717-80080736 MS.gene049261:intron 60.0%
TGTGGAAAGGGCTGCTGCAG+AGG - chr3.3:80078847-80078866 MS.gene049261:CDS 60.0%
! CGAGGAGGAGGTGGTCTTGA+AGG + chr3.3:80078386-80078405 None:intergenic 60.0%
! GGAGGAGGTGGTCTTGAAGG+TGG + chr3.3:80078383-80078402 None:intergenic 60.0%
! GGAGGTGGTCTTGAAGGTGG+TGG + chr3.3:80078380-80078399 None:intergenic 60.0%
! TGTACTGGTCGAGGAGGAGG+TGG + chr3.3:80078395-80078414 None:intergenic 60.0%
!! ACCGGAGGTGCTACGAGAGA+TGG + chr3.3:80075857-80075876 None:intergenic 60.0%
!! CCGGAGGTGCTACGAGAGAT+GGG + chr3.3:80075856-80075875 None:intergenic 60.0%
ACAGCGCTCCAAGGCCTCCT+AGG - chr3.3:80078960-80078979 MS.gene049261:CDS 65.0%
CCGTGAAAGGGCTGCTGCTG+AGG - chr3.3:80078712-80078731 MS.gene049261:CDS 65.0%
CGCGCTCCTGAGTCCTCTGA+AGG + chr3.3:80079879-80079898 None:intergenic 65.0%
GAAGGGCCAACAGCGCTCCA+AGG - chr3.3:80078951-80078970 MS.gene049261:CDS 65.0%
GCTGGGCTGCAGGGAAAGAG+GGG - chr3.3:80080718-80080737 MS.gene049261:intron 65.0%
GTGCTGGGCTGCAGGGAAAG+AGG - chr3.3:80080716-80080735 MS.gene049261:intron 65.0%
! TCAGAGGACTCAGGAGCGCG+CGG - chr3.3:80079879-80079898 MS.gene049261:intron 65.0%
!! AGGAGGCCTTGGAGCGCTGT+TGG + chr3.3:80078960-80078979 None:intergenic 65.0%
!! GCACCGATTCCCCAACACCG+TGG - chr3.3:80078021-80078040 MS.gene049261:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 80075664 80081629 80075664 ID=MS.gene049261
chr3.3 mRNA 80075664 80081629 80075664 ID=MS.gene049261.t1;Parent=MS.gene049261
chr3.3 exon 80081593 80081629 80081593 ID=MS.gene049261.t1.exon1;Parent=MS.gene049261.t1
chr3.3 CDS 80081593 80081629 80081593 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80081223 80081538 80081223 ID=MS.gene049261.t1.exon2;Parent=MS.gene049261.t1
chr3.3 CDS 80081223 80081538 80081223 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80078299 80079565 80078299 ID=MS.gene049261.t1.exon3;Parent=MS.gene049261.t1
chr3.3 CDS 80078299 80079565 80078299 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80077599 80077722 80077599 ID=MS.gene049261.t1.exon4;Parent=MS.gene049261.t1
chr3.3 CDS 80077599 80077722 80077599 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80077393 80077490 80077393 ID=MS.gene049261.t1.exon5;Parent=MS.gene049261.t1
chr3.3 CDS 80077393 80077490 80077393 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80076917 80076982 80076917 ID=MS.gene049261.t1.exon6;Parent=MS.gene049261.t1
chr3.3 CDS 80076917 80076982 80076917 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80076520 80076609 80076520 ID=MS.gene049261.t1.exon7;Parent=MS.gene049261.t1
chr3.3 CDS 80076520 80076609 80076520 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80075780 80075956 80075780 ID=MS.gene049261.t1.exon8;Parent=MS.gene049261.t1
chr3.3 CDS 80075780 80075956 80075780 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
chr3.3 exon 80075664 80075696 80075664 ID=MS.gene049261.t1.exon9;Parent=MS.gene049261.t1
chr3.3 CDS 80075664 80075696 80075664 ID=cds.MS.gene049261.t1;Parent=MS.gene049261.t1
Gene Sequence

>MS.gene049261

ATGAACGATTTCGATCGTTTATTAGCTACTGAATTCGGTTTGAAACCTCAAGGCAAATCTGCACCAATGTCATCATCATCATCATCCAAAGGATCTTCCAATTTCACCAAAACTTCCTCTCTCAACTTCGATTCACATTCCCGATCCTTTCACTCTTCCAATCATGATTCCGATCTCTTCAATTCTAATCCCATCTCTCGTAGCACCTCCGGTTTCACTTCCATGTCCGTCAACTCGCCTGTTTATGATAAACCTCTTTACGACGACGATGACGGAAGTGCCGTTGCGTTTGATGATCTTCTCGGCGGATTCGGTCATTCAAAGAAAACGGTGAAGAATGAGAGAGGTGTCGGTGATTTTGATGATTTGATCAATGGATTTGGGAATAGCAAGTCCTCCCGTCAAAGGTGTGGTTACTGAGCCTGAGCGTAACTTCTTAATTAAGTTTGTTTGTAATGTACTTTACATGCATGATCAAATGCATTTTAGTTTAAAGTATAGTTTATTTATTGATTTTTTTTTTTTGCTTGCATTTGAAGCAACGGTAGCCTATGATCTAGTGAAGGCTATGTAGTGAGACTGAACCTGAGGTTGAGGTTTATTGATATGTGTGAAAATTTATGAAACACCATACTCACACGCCGACACTTGTAAGAATTGAAAAGCTGAATTAATTGAATGTAATCATATTTGTTGGTGTCTTGCCGGTGTTTGACACTGACACGTGTTAGACACCAAACATGTCTTCCATCAGAAGTTTCGATGCTATATAGTTCTGATGAAGGGTTTAAAAGCTTTTGGTGAAATATTGGTTAGAGATTGGCTCCATTGGAGAATCAATGCATTTTAGAATAATAACGGCCCGATAATTGTGTTTAAACTTATGTGGTGGAGACACATAATTGGCTATAGTCTTCCTCAAATTTTAAATTGTCATTTATCTACCGATATCATGCATTCCCTGTCTTTTAAGAGGCTTTCATATAGGATTAAGTTGTCCATATTCTTTTATCCTTGAATATGGAAGTTCACAAGTTCACCTGCACTATATAATAAAACATGTTACAACTTGCAGAATATTATCTATTTGCTGGTTATCCTTGCAGTTAAACAAGGAATACTGGCCTGCAATGTCGTCAGTAGATTATTGTCTGAGTTTTTTCTTGTACCTTCGAAATTGATCTTAGTGTTTGGATCTCAAAAGTGGCTATAATGGTATTTGCCGAACATTAAGAGTTGGTTTGGAGGGAAAGAGGATGCTTCTTTGCTTTTTGCTTATTATGTATTTGGTTATGTACGAAAAACTGTATGTTTGGCTGTGATGATCGTGTGCTGTTTAGTAGATCTTTCAAGAATATGGGATGTCTTATGCATTTTGAATTTACCATATGTGTTTGTTTGTATCCTATCATTTTGTGTGGTAATCTATGCAGTTGATATCTAAGCAAACATACCATTGTTTGAAAGGTAACAGGCAGTTATGCTTGCTAATTTTATTCATTAAAGTAGACAACTGAAATAAATCTTGGAGGAGTTTGTAAGGGGTACATAGGCACTGGTGAGCTGAGTTTCTTCAGTGATTTAATTTTTGAACGGCATTTTTGAATTGGTTCATCATTGGTGGACTCCCTTTAGTCAAATAGGAACATTTTAATATAAAAAAGCATGAGTGATTCCAATGAAATCTTGTACCTACACATTATAACTTCATGAGTGTTTTGTTTATAGCTTAAGGGTTCTTATTTCAGTAGTGGATTTTTCTTCTCAGCGGATTCCTGTGCATTTTTATTTAAGAAGTGGATTTATCATTTTATCTGGTAGCTTATAAAACGGACCTATGGAATAAGAAAGTTATTGTTGTTCTGTAATGCTTTGTCTATTAGGAGATTTGAATTGAAATCTTATGGCTTTGTTGTTCCTAAGCATCGCATTTCGTTTAACAAACATGAAGAGAATGGGAATAAGAATAATCGAAAAGGGACAATCCGATCCCTTATTTTTCACGTATTAGTTGATCTGTTGATGTATCATAATATATTATTTTAACTTATCGTTTCATCACAGGCCCACTCCTGATATTGGTTCATCATCAGAATCTACTTTCAGTGCATCTAAAACAACCTCCAATGCAACAGAAGACCCTTTTAAAATATTTGAATCAGCTTCCGCTCCAACTGATTCATCCTCAGGCCACTTTTCAGACCCATTAGAAGAGATTAGTAAATTTACTAGTTCTAAAAGCACAAAAAATGATAGTTCATCAAATTCTAATGGTGCAGTATATGATGATACTGATCCTTTTGATGGACTTGGAAATTCAGTACCAGCATTTTCATCAGAGAGGACTAGCAGATATGGCACCGATTCCCCAACACCGTGGTCAAACACAAGTTCAGGTTGGACCAGAGATAAAGAATCAATTGAAAAATTGTCTGTGAGGAGTCCTGATAGACGAACACATAACAAGATTCCTGTTGAACATGATCAGGAGTTTCATCAAGCGCCATATGGCATGCCTAAATATTCATCTGATTCTAATAAACCAGTAGCTGGCCAAATGCCTACTTCCCCTTCTTATTTTAATGATGGTTTTAGACCCGTCAATTCTCGGGCAGATATGTCTCCAAACTATGAAGAAAAGTTGGCCTCAGATCATGACGATATATGGCTAACGGTATCAGAGATTCCTCTTTTTACACAACCAACTTCTGCTCCACCACCTTCAAGACCACCTCCTCCTCGACCAGTACATATTCCCAAGTCAGAGGAGAGAAGCAGTTCAAACCATGAGCAGCAGCAAAAGGAGATGGAGGATAGAGAGCAAAGAAGAATTGAAAGGGAAAGGAAGGAGAAAGAAAGAGAACAACAGAGACTTGAGAGGGAAAGAGAAAATGAAAGACAGGCTGTGGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAAGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCCGCTGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGAAAAGGGCTGAAAAGGCTGCTGCAGGGGAAAAGGTGAGAGAAGCACGAGAAAGAGCTGCAGCTGCAAGGACTGAAGCTGAAGCACGAGTTAAAGCAGAACGTGCTGCTGTGGAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGAATGTACCAGCAAAAAAATGAAAATGATCTTGAATCGTTCTTCAGCGTGAGGGGAAGGGCCAACAGCGCTCCAAGGCCTCCTAGGTCTAACTCTTCTGTGAGTACCATGTCTTGATAAACATTATTTATACTAAAGCGGCTAACTCTTGGCTTTGATGTTTGGTCTCTTCCCCATCATTTTTATTATTAATGCAGGAACTTAAATTTAGTTACTCCCTACGTCACAAATTATAAGTCACTTTTTAAAACAAAATTGTCCCAAATTATAAGTCGCTTTACAATACCAATGAAACATTAATGTTATTTTTCCTATTATACCCTTAACTATTTATTACTCTCTTCTTTCAATTCTTTAATTTATCTTTCCCATACCATTTATTAAGGACAATTTTGTAAAACAACTCATAATATCTCTTTCCTATACAAAATTAATTACATTTCTTAATATGTGTGAAATGTCCAAAACATCATATAATTTGGGACGGAGGGAGTAGTTGTTATTTTATTCTTTCCACTTTTATTTTAAAAGAGTTTTAAATAAAAAAGGGATGTATAAAATTGTCAAGTTTTAAAATTATTCATACGTTTTAAATGTTAAAAGTTTGGCTAACAAGCAGCCATAGAGTCATACTTTTTGCATTTTGAAAGAAGTTCTGTATCTCTTTACTTTCAGGATTCAGTTTTTGATGCACAATTTCAGCCAGAGGTAAACCAGAAACCTACAACTGTGTCTTCAAACATAAAGAGGGCACCATCATCACCTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGGTAGGATTTTGTGGCAATATACTGTTATTGATGTGGAAGTTGTTTGAATTTTCTTTTGTCTCAATGCTTATTTGTCTTTTTCCATCCCTTTTCTTTTATGGTTTGAAGCATCTCCCTCAGCTGGAGAATTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGGCGAAAAGCCAGATTGGAAAGCCTTCAGAGGACTCAGGAGCGCGCGGTATGTTTTTTGTATTTTGTTCTTTAATTTGTCTTCTTCATTGTTATTGATAGTAAAAGAAGGCAACCAATAGTAAAGGAAGGCAACCAATTTACAATTTTGAACTCAATTGACATTGATTCCTATAGAAGTGTTGGGATAAAGAATAAAGGGGAGTTAGAGAAGGATAGAGAAAATAGTTCTGTACATTTGATATCTTGAAAGTGAAAGGAGAAACCTTAGAGAAGAGACTCTCTCCTACTCTATCCATTAGTTGTTAAAAAGAAAAAAATGTTCTCTTACCATTTCTTTCTTTCTTTCAGTTTTCCAACTCTTTTCTTTAAGATGCTAACTGGAAGCGTGTGCATTATTGAATAACCTCTTCAAATTGTTTGTCTATGTTACATATAACCATTACCTTTTTATACTAGGCAAAAGCATTGGCTGAGAAGAATCAACGGGACCTACAGACTCAAAGAGAGCAGAATGAGAGACATGTAAGTAGTATATTTGTTGCTTTTCTTTTTATTTGTGACCGGGTGGTTTCTGCTCATACAGTTGCATTGTGCCCATTGCATGTTCAAAATATATATCTCTGTCATCTTGCCTATAAAAAACTATCTCTTTCATTCATTTTCCCAATACATGCATCTGTGTCAGGTAATATTGTCCAACTTCCTAATCTTTATGTTGGATGATTGTGATTAGTTGGATGTTACTTCCGAGTTCTCCGCTAATTTGCACGGTTTTTATTGTCATGTGTTTTATTTTTACTATCTAATTTTATCTACACATTGATTTCAGAGGCTTGCGGAAACACTGGACTTTGAAGTTAAGTGCTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTCTACTCTCCACCTTACAATATGTATGTACTAAGTACTTGGTATAATGCCCAGGGTTTGCTGCCTTATGCTATCTATTATTATATTTTCTTTAAAAAAATGCTTGAGGCCAGATTTTTTTAATATTCTTTCGTTTGCCTCATCTAATCACCTCATTGCTCCTACTCCTAGGGATATAAGTGGACAATGTTGTAACTTTCTATTCAAAACTGTTGTTATCAGTTTCATTCGCTCTGCTCATTACAGGCTCAACCAGTAATTTAAATTCCTCCACTATTTATATGTTATCCATATTGTATAAGCATTTTCCAATCAGGTAATTACTAAAATTAGGTGCATTTTAAGGAAAACAGCTCCTCTTTACAGAGCACTGTAGTATTCTACTTAAAATCCAAATCAATCACAGTCAATTGAAATGAAGGCAAAAGCAACTTGTTTCCGTGATTTAATGTACACCGAAATGTTCCTTCGTGAATCTTGAAGCAGCCAAACACTCCAGTAACTTATAGTGTTTTTAAGGTGGTATTGTTTTTCTTCTATAATTTGTCTATTATGTTAACGCATCTCCTTCATGAATGATGATCAGGTATTATGGCCTGAATGTGGTTGGCAGGCAGTTTCTTTGACTGATCTTATTACAGCCGCTACTGTTAAAAAGGCTTATAGAAAAGCTACACTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAGCAGAAATATATTGCAGAAAAGGTTTTCGATCTACTAAAGGTATTTGAGTCCTTTCTATACATTTCTTTCTAATGAATACTTTATAAAGAAAGAAATGATTGCCAGTTGAAAATGATGATTAGGCCACTGTTATCTACATGTGGGTTTCCACATAA
Protein sequence

>MS.gene049261.t1

MNDFDRLLATEFGSSNFTKTSSLNFDSHSRSFHSSNHDSDLFNSNPISRSTSGFTSMSVNSPVYDKPLYDDDDGSAVAFDDLLGGFGHSKKTVKNERGVGDFDDLINGFGNSKSSRQRPTPDIGSSSESTFSASKTTSNATEDPFKIFESASAPTDSSSGHFSDPLEEISKFTSSKSTKNDSSSNSNGAVYDDTDPFDGLGNSVPAFSSERTSRYGTDSPTPWSNTSSGWTRDKESIEKLSVRSPDRRTHNKIPVEHDQEFHQAPYGMPKYSSDSNKPVAGQMPTSPSYFNDGFRPVNSRADMSPNYEEKLASDHDDIWLTVSEIPLFTQPTSAPPPSRPPPPRPVHIPKSEERSSSNHEQQQKEMEDREQRRIERERKEKEREQQRLERERENERQAVERATREARERAAAEARQRAEKAAVEKANAEARVRAERAAVQRAQAEARERAAAEAKKRAEKAAAGEKVREARERAAAARTEAEARVKAERAAVERAAAEARERAAAAARMYQQKNENDLESFFSVRGRANSAPRPPRSNSSDSVFDAQFQPEVNQKPTTVSSNIKRAPSSPNIVDDLSSIFGASPSAGEFQEVEGESEERRKARLESLQRTQERAAKALAEKNQRDLQTQREQNERHRLAETLDFEVKCWAAGKEGNLRALLSTLQYVLWPECGWQAVSLTDLITAATVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKATVIYMWVST