Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06502.t1 | XP_013461539.1 | 97.8 | 601 | 12 | 1 | 1 | 601 | 3 | 602 | 0.00E+00 | 1137.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06502.t1 | Q9SRK7 | 80.1 | 549 | 109 | 0 | 21 | 569 | 19 | 567 | 1.6e-255 | 883.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06502.t1 | A0A072V0M1 | 97.8 | 601 | 12 | 1 | 1 | 601 | 3 | 602 | 0.0e+00 | 1137.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049377 | MS.gene06502 | 0.935746 | 5.22E-97 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06502 | MS.gene022431 | PPI |
| MS.gene06502 | MS.gene98272 | PPI |
| MS.gene06502 | MS.gene35464 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06502.t1 | MTR_3g094320 | 97.837 | 601 | 12 | 1 | 1 | 601 | 3 | 602 | 0.0 | 1197 |
| MS.gene06502.t1 | MTR_3g075120 | 49.732 | 559 | 234 | 7 | 27 | 582 | 25 | 539 | 3.37e-174 | 505 |
| MS.gene06502.t1 | MTR_7g072600 | 80.263 | 76 | 15 | 0 | 205 | 280 | 18 | 93 | 1.35e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06502.t1 | AT3G10960 | 79.249 | 559 | 114 | 1 | 13 | 569 | 9 | 567 | 0.0 | 927 |
| MS.gene06502.t1 | AT5G50300 | 51.816 | 523 | 212 | 6 | 24 | 546 | 16 | 498 | 3.37e-180 | 520 |
| MS.gene06502.t1 | AT5G50300 | 51.916 | 522 | 211 | 6 | 25 | 546 | 34 | 515 | 5.09e-180 | 520 |
Find 183 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTGTGTTGAATATT+TGG | 0.076406 | 3.2:+79083681 | MS.gene06502:CDS |
| CTTCCAGGTGGAACGGTTTC+TGG | 0.122948 | 3.2:+79082900 | MS.gene06502:CDS |
| TTGACGTATTCTATTGCTTA+TGG | 0.169383 | 3.2:+79083638 | MS.gene06502:CDS |
| TCGATTCCGGCTTGGGCTAT+TGG | 0.191352 | 3.2:+79083506 | MS.gene06502:CDS |
| TCTATTGCTTATGGGCTTAT+TGG | 0.206601 | 3.2:+79083647 | MS.gene06502:CDS |
| GAAGAATTATTAGTACTATT+TGG | 0.227837 | 3.2:-79083761 | None:intergenic |
| GCGGCATAGCCCGGGTTAAC+AGG | 0.231130 | 3.2:-79082417 | None:intergenic |
| TGGGCTTGGTGGGCTGGAAG+TGG | 0.265248 | 3.2:-79082102 | None:intergenic |
| TTTGTGTGGGCTTGGTGGGC+TGG | 0.270309 | 3.2:-79082108 | None:intergenic |
| AGTTGTAGTGCTTTAGCATT+TGG | 0.276034 | 3.2:-79083839 | None:intergenic |
| GGCTTGGTGGGCTGGAAGTG+GGG | 0.285194 | 3.2:-79082100 | None:intergenic |
| TGACGTATTCTATTGCTTAT+GGG | 0.291944 | 3.2:+79083639 | MS.gene06502:CDS |
| TTAGTACTATTTGGCTCCTT+TGG | 0.300708 | 3.2:-79083752 | None:intergenic |
| CCTCATTGGTTGCTTCATCA+TGG | 0.302903 | 3.2:+79082491 | MS.gene06502:CDS |
| TACACCGTCGTGGGCTTTCA+TGG | 0.307316 | 3.2:+79082576 | MS.gene06502:CDS |
| GGGCTTGGTGGGCTGGAAGT+GGG | 0.307342 | 3.2:-79082101 | None:intergenic |
| ACACTCTGGTTGGGCCTTGT+GGG | 0.309150 | 3.2:+79082960 | MS.gene06502:CDS |
| ACCGTGGCTTCTTCCCTCAT+TGG | 0.312133 | 3.2:+79082477 | MS.gene06502:CDS |
| GAGCTTATTCTAACGGGCTT+TGG | 0.315835 | 3.2:-79082708 | None:intergenic |
| GGGCTTTGTGTGGGCTTGGT+GGG | 0.322247 | 3.2:-79082112 | None:intergenic |
| GCAAATTTGCATGAGATATC+AGG | 0.323440 | 3.2:-79082393 | None:intergenic |
| GTTGGCTTCGATTCCGGCTT+GGG | 0.351004 | 3.2:+79083499 | MS.gene06502:CDS |
| TGGGCTTTGTGTGGGCTTGG+TGG | 0.351560 | 3.2:-79082113 | None:intergenic |
| ATTGTGGTGGGGTCGTTGTT+AGG | 0.353079 | 3.2:+79083356 | MS.gene06502:CDS |
| GCTTGGTGGGCTGGAAGTGG+GGG | 0.354232 | 3.2:-79082099 | None:intergenic |
| CTCATTGGTTGCTTCATCAT+GGG | 0.356545 | 3.2:+79082492 | MS.gene06502:CDS |
| GAATCACCGGCGGCGGTGTT+AGG | 0.356687 | 3.2:-79083095 | None:intergenic |
| TTTAGGCCTTGCTCCAGGTA+TGG | 0.357659 | 3.2:+79082533 | MS.gene06502:CDS |
| ACCGTTGTTGGCTTCGATTC+CGG | 0.363246 | 3.2:+79083493 | MS.gene06502:CDS |
| TATGGGCTTATTGGTGTGAT+TGG | 0.363307 | 3.2:+79083656 | MS.gene06502:CDS |
| AACACTCTGGTTGGGCCTTG+TGG | 0.368956 | 3.2:+79082959 | MS.gene06502:CDS |
| GTAAACTAACGGTTCCGTTA+AGG | 0.370350 | 3.2:-79082878 | None:intergenic |
| TGTGTTGAATATTTGGGATT+GGG | 0.370811 | 3.2:+79083688 | MS.gene06502:CDS |
| GACTCAATAAACGCCGTTAC+CGG | 0.371162 | 3.2:-79083386 | None:intergenic |
| TAAACTAACGGTTCCGTTAA+GGG | 0.373233 | 3.2:-79082877 | None:intergenic |
| TTACATTGTGTTGAATATTT+GGG | 0.373652 | 3.2:+79083682 | MS.gene06502:CDS |
| TGTTGGCTTCGATTCCGGCT+TGG | 0.388698 | 3.2:+79083498 | MS.gene06502:CDS |
| AGCCGTTCCGGCACGGAGTT+CGG | 0.388894 | 3.2:-79082217 | None:intergenic |
| CTTCTCAATCTCAAGTCAAT+GGG | 0.395869 | 3.2:+79083780 | MS.gene06502:CDS |
| GACAGGAACGTTGTATTCTA+TGG | 0.398225 | 3.2:+79083256 | MS.gene06502:CDS |
| TTAGGCCTTGCTCCAGGTAT+GGG | 0.400907 | 3.2:+79082534 | MS.gene06502:CDS |
| TTCTTACTCATTTCATCAGT+CGG | 0.402497 | 3.2:+79082657 | MS.gene06502:CDS |
| TTGCGACGATCAAGTCTTTA+CGG | 0.404816 | 3.2:-79082455 | None:intergenic |
| GTGTTGAATATTTGGGATTG+GGG | 0.406876 | 3.2:+79083689 | MS.gene06502:CDS |
| CAAGGCCCAACCAGAGTGTT+GGG | 0.421403 | 3.2:-79082956 | None:intergenic |
| AGATGGGCTTTGTGTGGGCT+TGG | 0.423297 | 3.2:-79082116 | None:intergenic |
| CCGTTAAGGGCGGTTATAAC+CGG | 0.427393 | 3.2:-79082864 | None:intergenic |
| TATTCTATGGCAAGGTTCGC+AGG | 0.427768 | 3.2:+79083269 | MS.gene06502:CDS |
| TCTTCTCAATCTCAAGTCAA+TGG | 0.428375 | 3.2:+79083779 | MS.gene06502:CDS |
| GCCTCCATTCTAACTGATTC+CGG | 0.430705 | 3.2:+79082276 | MS.gene06502:CDS |
| TTGTGTTGAATATTTGGGAT+TGG | 0.433005 | 3.2:+79083687 | MS.gene06502:CDS |
| AGTTAGAATGGAGGCGTTGA+CGG | 0.433565 | 3.2:-79082268 | None:intergenic |
| ATCAAGGTATCGGGCTCGTT+GGG | 0.436910 | 3.2:+79082778 | MS.gene06502:CDS |
| GATCAGTGGTGGAGATTGAT+TGG | 0.437552 | 3.2:+79083564 | MS.gene06502:CDS |
| GCGTTTATTGAGTCTTCAAC+GGG | 0.437581 | 3.2:+79083395 | MS.gene06502:CDS |
| CAAATTTGCCCCTGTTAACC+CGG | 0.439914 | 3.2:+79082407 | MS.gene06502:CDS |
| TCAAGACAAGCGGCATAGCC+CGG | 0.441522 | 3.2:-79082426 | None:intergenic |
| TAAGCGTTTGAGCCCATACC+TGG | 0.449378 | 3.2:-79082546 | None:intergenic |
| TACCTGGAGCAAGGCCTAAA+GGG | 0.453864 | 3.2:-79082530 | None:intergenic |
| GCAGGTTTCACCGACGAAAA+CGG | 0.454776 | 3.2:+79083287 | MS.gene06502:CDS |
| AACGGGGATAACGGCGTTGA+CGG | 0.457237 | 3.2:+79083436 | MS.gene06502:CDS |
| TAAGCTCCTCCGCCGGTATC+GGG | 0.458576 | 3.2:+79082724 | MS.gene06502:CDS |
| ATAAGCTCCTCCGCCGGTAT+CGG | 0.462080 | 3.2:+79082723 | MS.gene06502:CDS |
| AGTTTGAGGTAGAGATGGAT+GGG | 0.464799 | 3.2:-79082341 | None:intergenic |
| TGTTGGGCCGGTACAGTTTG+AGG | 0.465795 | 3.2:-79082355 | None:intergenic |
| GATAACGGCGTTGACGGTGG+CGG | 0.470469 | 3.2:+79083442 | MS.gene06502:CDS |
| GCGGAGGAGCTTATTCTAAC+GGG | 0.470882 | 3.2:-79082714 | None:intergenic |
| CTTCAAAACAATCAAGGTAT+CGG | 0.473008 | 3.2:+79082768 | MS.gene06502:CDS |
| TGCGACGATCAAGTCTTTAC+GGG | 0.473171 | 3.2:-79082454 | None:intergenic |
| GGAACCGTTAGTTTACTTCC+AGG | 0.476049 | 3.2:+79082885 | MS.gene06502:CDS |
| GAAAGCCCAACACTCTGGTT+GGG | 0.477055 | 3.2:+79082951 | MS.gene06502:CDS |
| ATCGGGCTTCAAAACAATCA+AGG | 0.478586 | 3.2:+79082762 | MS.gene06502:CDS |
| AAGAAGCCCGTGATGAGCTT+GGG | 0.478670 | 3.2:-79082836 | None:intergenic |
| GGTGAGGAAAGTAGCCGTTC+CGG | 0.483396 | 3.2:-79082229 | None:intergenic |
| CTCCCTTTAGGCCTTGCTCC+AGG | 0.484772 | 3.2:+79082528 | MS.gene06502:CDS |
| CGGCATAGCCCGGGTTAACA+GGG | 0.484866 | 3.2:-79082416 | None:intergenic |
| TACTTTGCTTACACCGTCGT+GGG | 0.484912 | 3.2:+79082567 | MS.gene06502:CDS |
| TTCAAAACAATCAAGGTATC+GGG | 0.488455 | 3.2:+79082769 | MS.gene06502:CDS |
| AAAGAAGCCCGTGATGAGCT+TGG | 0.488675 | 3.2:-79082837 | None:intergenic |
| GATGCCACGTCGATTGTGGT+GGG | 0.494246 | 3.2:+79083344 | MS.gene06502:CDS |
| CAGTTTGAGGTAGAGATGGA+TGG | 0.494890 | 3.2:-79082342 | None:intergenic |
| ATAACGGCGTTGACGGTGGC+GGG | 0.500012 | 3.2:+79083443 | MS.gene06502:CDS |
| CCGGTTATAACCGCCCTTAA+CGG | 0.501073 | 3.2:+79082864 | MS.gene06502:CDS |
| ACAAGGCCCAACCAGAGTGT+TGG | 0.502515 | 3.2:-79082957 | None:intergenic |
| AATCAAGGTATCGGGCTCGT+TGG | 0.506621 | 3.2:+79082777 | MS.gene06502:CDS |
| ATACCTGGAGCAAGGCCTAA+AGG | 0.511435 | 3.2:-79082531 | None:intergenic |
| GGAAAGCCCAACACTCTGGT+TGG | 0.517673 | 3.2:+79082950 | MS.gene06502:CDS |
| AAACTGCTGCGAGTGCGCTT+TGG | 0.520672 | 3.2:-79082617 | None:intergenic |
| GTCGTGGGCTTTCATGGCTC+CGG | 0.521893 | 3.2:+79082582 | MS.gene06502:CDS |
| GTGGTTGCCCAAGCTCATCA+CGG | 0.526556 | 3.2:+79082829 | MS.gene06502:CDS |
| GGTGAAAGTGGAGTTACGTT+GGG | 0.530487 | 3.2:-79082193 | None:intergenic |
| ATCTCTACCTCAAACTGTAC+CGG | 0.533272 | 3.2:+79082348 | MS.gene06502:CDS |
| AAAACTTAACGCACCTGCTG+TGG | 0.535615 | 3.2:-79083165 | None:intergenic |
| TCCGCCGGAATCAGTTAGAA+TGG | 0.535814 | 3.2:-79082280 | None:intergenic |
| GTTAGGAACTTCACCGGTAA+CGG | 0.535923 | 3.2:+79083373 | MS.gene06502:CDS |
| TGGTTGCCCAAGCTCATCAC+GGG | 0.536796 | 3.2:+79082830 | MS.gene06502:CDS |
| GTGGACATTCTCGACACGAC+AGG | 0.538088 | 3.2:+79083239 | MS.gene06502:CDS |
| CAAGACAAGCGGCATAGCCC+GGG | 0.539731 | 3.2:-79082425 | None:intergenic |
| ACGGAGTTCGGTGGTGAAAG+TGG | 0.539970 | 3.2:-79082205 | None:intergenic |
| ATCACGGGCTTCTTTAGCGC+CGG | 0.540803 | 3.2:+79082845 | MS.gene06502:CDS |
| GAATGGAAAGCCCAACACTC+TGG | 0.545342 | 3.2:+79082946 | MS.gene06502:CDS |
| CACCGAACTCCGTGCCGGAA+CGG | 0.546674 | 3.2:+79082215 | MS.gene06502:CDS |
| ATCAGTGGTGGAGATTGATT+GGG | 0.550445 | 3.2:+79083565 | MS.gene06502:CDS |
| ATACTCATGAGCTGAATCAC+CGG | 0.551717 | 3.2:-79083108 | None:intergenic |
| GTCGGATGCCACGTCGATTG+TGG | 0.557591 | 3.2:+79083340 | MS.gene06502:CDS |
| TTACTTTGCTTACACCGTCG+TGG | 0.560920 | 3.2:+79082566 | MS.gene06502:CDS |
| AGCGAGAGATGGGCTTTGTG+TGG | 0.561400 | 3.2:-79082122 | None:intergenic |
| TTCAACGGGGATAAGAGAAG+GGG | 0.564344 | 3.2:+79083409 | MS.gene06502:CDS |
| TGAACAGAGAGGGACACAAT+CGG | 0.566224 | 3.2:-79082316 | None:intergenic |
| GGCGTTTATTGAGTCTTCAA+CGG | 0.566505 | 3.2:+79083394 | MS.gene06502:CDS |
| TAGTTTACTTCCAGGTGGAA+CGG | 0.566620 | 3.2:+79082893 | MS.gene06502:CDS |
| TCACCAGAAACCGTTCCACC+TGG | 0.568299 | 3.2:-79082903 | None:intergenic |
| GTCGTTGTTAGGAACTTCAC+CGG | 0.568498 | 3.2:+79083367 | MS.gene06502:CDS |
| AGCTCATGAGTATTTCAAGA+AGG | 0.569434 | 3.2:+79083118 | MS.gene06502:CDS |
| ATGAGCTGAATCACCGGCGG+CGG | 0.573355 | 3.2:-79083102 | None:intergenic |
| CATGATGAAGCAACCAATGA+GGG | 0.573818 | 3.2:-79082490 | None:intergenic |
| TAGGTGTTGAAGCGAGAGAT+GGG | 0.574642 | 3.2:-79082132 | None:intergenic |
| TGTTGAATATTTGGGATTGG+GGG | 0.574721 | 3.2:+79083690 | MS.gene06502:CDS |
| GTAGGTGTTGAAGCGAGAGA+TGG | 0.577020 | 3.2:-79082133 | None:intergenic |
| TTGGGCTTTCCATTCTATCA+CGG | 0.579130 | 3.2:-79082938 | None:intergenic |
| GCGTTTCCTAACACCGCCGC+CGG | 0.580860 | 3.2:+79083089 | MS.gene06502:CDS |
| TTCACCACCGAACTCCGTGC+CGG | 0.584018 | 3.2:+79082210 | MS.gene06502:CDS |
| TTTGATGATGAGATCAGTGG+TGG | 0.585140 | 3.2:+79083553 | MS.gene06502:CDS |
| GCTGAATGAGATGAAGTGTT+GGG | 0.585209 | 3.2:-79082371 | None:intergenic |
| GGCTGAATGAGATGAAGTGT+TGG | 0.586143 | 3.2:-79082372 | None:intergenic |
| GCGAGAGATGGGCTTTGTGT+GGG | 0.587534 | 3.2:-79082121 | None:intergenic |
| GTGAAAGGAGCAATGATCTA+CGG | 0.592507 | 3.2:+79083017 | MS.gene06502:CDS |
| GGGGATAACGGCGTTGACGG+TGG | 0.593326 | 3.2:+79083439 | MS.gene06502:CDS |
| GGATGCCACGTCGATTGTGG+TGG | 0.594421 | 3.2:+79083343 | MS.gene06502:CDS |
| TACGTAGCTAAAACAAGACT+AGG | 0.594536 | 3.2:+79082153 | MS.gene06502:CDS |
| GGTACAGTTTGAGGTAGAGA+TGG | 0.595273 | 3.2:-79082346 | None:intergenic |
| ACCAATGAGGGAAGAAGCCA+CGG | 0.598545 | 3.2:-79082478 | None:intergenic |
| CTTCAACGGGGATAAGAGAA+GGG | 0.601128 | 3.2:+79083408 | MS.gene06502:CDS |
| TTGAGCCCATACCTGGAGCA+AGG | 0.601157 | 3.2:-79082539 | None:intergenic |
| TCTTCAACGGGGATAAGAGA+AGG | 0.601843 | 3.2:+79083407 | MS.gene06502:CDS |
| GGCGGAGGAGCTTATTCTAA+CGG | 0.607380 | 3.2:-79082715 | None:intergenic |
| ACCACCGAGTGTGACTAAAG+TGG | 0.607913 | 3.2:-79082811 | None:intergenic |
| AACGGCTACTTTCCTCACCA+TGG | 0.608652 | 3.2:+79082233 | MS.gene06502:CDS |
| GAATGGAGGCGTTGACGGCG+AGG | 0.609867 | 3.2:-79082263 | None:intergenic |
| AAATTTGCCCCTGTTAACCC+GGG | 0.610985 | 3.2:+79082408 | MS.gene06502:CDS |
| TAAGCAATAGAATACGTCAA+AGG | 0.613028 | 3.2:-79083635 | None:intergenic |
| TGGTGAAAGTGGAGTTACGT+TGG | 0.613545 | 3.2:-79082194 | None:intergenic |
| GGAAAGTAGCCGTTCCGGCA+CGG | 0.613745 | 3.2:-79082224 | None:intergenic |
| GGAAACAGAGCATGTTCCGC+CGG | 0.618328 | 3.2:-79082295 | None:intergenic |
| TGCTGCGAGTGCGCTTTGGT+AGG | 0.618475 | 3.2:-79082613 | None:intergenic |
| TGGATGGGTTTGAACAGAGA+GGG | 0.620381 | 3.2:-79082326 | None:intergenic |
| GTCAAACTGATCAACCTCAA+AGG | 0.625363 | 3.2:+79082076 | MS.gene06502:CDS |
| GTTTCGAAACACGAAAGTAA+CGG | 0.626465 | 3.2:+79083067 | MS.gene06502:CDS |
| TCATGAGTATTTCAAGAAGG+TGG | 0.628281 | 3.2:+79083121 | MS.gene06502:CDS |
| CGATTATAATAAAGCCCACA+AGG | 0.628686 | 3.2:-79082974 | None:intergenic |
| ACCGTTAGTTTACTTCCAGG+TGG | 0.631433 | 3.2:+79082888 | MS.gene06502:CDS |
| AAACTGCATACTCAAATGGA+GGG | 0.632040 | 3.2:+79082054 | None:intergenic |
| GAACGTTGTATTCTATGGCA+AGG | 0.632846 | 3.2:+79083261 | MS.gene06502:CDS |
| CACACGATAAAATCCACAGC+AGG | 0.633084 | 3.2:+79083152 | MS.gene06502:CDS |
| AGTATCATTGTCACAAACGC+AGG | 0.635330 | 3.2:-79083608 | None:intergenic |
| TCATCCACTTTAGTCACACT+CGG | 0.635622 | 3.2:+79082807 | MS.gene06502:CDS |
| AATGAGATGAAGTGTTGGGC+CGG | 0.636832 | 3.2:-79082367 | None:intergenic |
| CCATGATGAAGCAACCAATG+AGG | 0.637485 | 3.2:-79082491 | None:intergenic |
| GGTGGTCCAATAGCCCAAGC+CGG | 0.637635 | 3.2:-79083512 | None:intergenic |
| AGACTTGATCGTCGCAACCG+TGG | 0.637658 | 3.2:+79082461 | MS.gene06502:CDS |
| GACGGCGAGGATGTAAGCCA+TGG | 0.639305 | 3.2:-79082250 | None:intergenic |
| GCCGGAATCGAAGCCAACAA+CGG | 0.641962 | 3.2:-79083494 | None:intergenic |
| CGAGGATGTAAGCCATGGTG+AGG | 0.641965 | 3.2:-79082245 | None:intergenic |
| CGTTCCGGCACGGAGTTCGG+TGG | 0.642018 | 3.2:-79082214 | None:intergenic |
| TCAATCTCAAGTCAATGGGG+TGG | 0.649645 | 3.2:+79083784 | MS.gene06502:CDS |
| AAAACTCCCACTAAAATCAA+CGG | 0.651104 | 3.2:-79083533 | None:intergenic |
| GGCATAGCCCGGGTTAACAG+GGG | 0.652581 | 3.2:-79082415 | None:intergenic |
| TCCACCTGGAAGTAAACTAA+CGG | 0.660353 | 3.2:-79082889 | None:intergenic |
| GTTAGAATAAGCTCCTCCGC+CGG | 0.662382 | 3.2:+79082717 | MS.gene06502:CDS |
| GCCGGAATCAGTTAGAATGG+AGG | 0.674641 | 3.2:-79082277 | None:intergenic |
| ATGCCACGTCGATTGTGGTG+GGG | 0.676120 | 3.2:+79083345 | MS.gene06502:CDS |
| CGACCCCACCACAATCGACG+TGG | 0.676358 | 3.2:-79083348 | None:intergenic |
| TTCTCAATCTCAAGTCAATG+GGG | 0.684014 | 3.2:+79083781 | MS.gene06502:CDS |
| ATGGATGGGTTTGAACAGAG+AGG | 0.686685 | 3.2:-79082327 | None:intergenic |
| TCCACTTTAGTCACACTCGG+TGG | 0.687536 | 3.2:+79082810 | MS.gene06502:CDS |
| TCCATTCTAACTGATTCCGG+CGG | 0.703938 | 3.2:+79082279 | MS.gene06502:CDS |
| GCTTTGGTAGGAGATAGTGC+CGG | 0.718145 | 3.2:-79082601 | None:intergenic |
| CTCATGAGCTGAATCACCGG+CGG | 0.724265 | 3.2:-79083105 | None:intergenic |
| TCAACGGGGATAAGAGAAGG+GGG | 0.727255 | 3.2:+79083410 | MS.gene06502:CDS |
| GGAGCCATGAAAGCCCACGA+CGG | 0.728697 | 3.2:-79082580 | None:intergenic |
| ACTCCCACTAAAATCAACGG+TGG | 0.739508 | 3.2:-79083530 | None:intergenic |
| ACTAACGGTTCCGTTAAGGG+CGG | 0.739734 | 3.2:-79082874 | None:intergenic |
| CGTTTATTGAGTCTTCAACG+GGG | 0.769550 | 3.2:+79083396 | MS.gene06502:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGAATTATTAGTACTATT+TGG | - | chr3.2:79083764-79083783 | None:intergenic | 20.0% |
| !! | TTACATTGTGTTGAATATTT+GGG | + | chr3.2:79083682-79083701 | MS.gene06502:CDS | 20.0% |
| ! | CTTACATTGTGTTGAATATT+TGG | + | chr3.2:79083681-79083700 | MS.gene06502:CDS | 25.0% |
| ! | TGTTTAGTAAAAAACGTGAA+AGG | + | chr3.2:79083002-79083021 | MS.gene06502:CDS | 25.0% |
| !! | ACAATATTTTGCGTTTATGT+CGG | + | chr3.2:79083322-79083341 | MS.gene06502:CDS | 25.0% |
| AAAACTCCCACTAAAATCAA+CGG | - | chr3.2:79083536-79083555 | None:intergenic | 30.0% | |
| CTTCAAAACAATCAAGGTAT+CGG | + | chr3.2:79082768-79082787 | MS.gene06502:CDS | 30.0% | |
| TAAGCAATAGAATACGTCAA+AGG | - | chr3.2:79083638-79083657 | None:intergenic | 30.0% | |
| TGACGTATTCTATTGCTTAT+GGG | + | chr3.2:79083639-79083658 | MS.gene06502:CDS | 30.0% | |
| TTCTTACTCATTTCATCAGT+CGG | + | chr3.2:79082657-79082676 | MS.gene06502:CDS | 30.0% | |
| TTGACGTATTCTATTGCTTA+TGG | + | chr3.2:79083638-79083657 | MS.gene06502:CDS | 30.0% | |
| ! | TGTGGTAACATTTTTATACG+TGG | + | chr3.2:79083220-79083239 | MS.gene06502:CDS | 30.0% |
| ! | TGTGTTGAATATTTGGGATT+GGG | + | chr3.2:79083688-79083707 | MS.gene06502:CDS | 30.0% |
| ! | TTCAAAACAATCAAGGTATC+GGG | + | chr3.2:79082769-79082788 | MS.gene06502:CDS | 30.0% |
| ! | TTGTGTTGAATATTTGGGAT+TGG | + | chr3.2:79083687-79083706 | MS.gene06502:CDS | 30.0% |
| !! | AGTTTTAACAGCATAGGAAA+AGG | + | chr3.2:79083182-79083201 | MS.gene06502:CDS | 30.0% |
| !! | GTTTTAACAGCATAGGAAAA+GGG | + | chr3.2:79083183-79083202 | MS.gene06502:CDS | 30.0% |
| !!! | CATAGGAAAAGGGTATTTTT+GGG | + | chr3.2:79083193-79083212 | MS.gene06502:CDS | 30.0% |
| AGCTCATGAGTATTTCAAGA+AGG | + | chr3.2:79083118-79083137 | MS.gene06502:CDS | 35.0% | |
| AGTTGTAGTGCTTTAGCATT+TGG | - | chr3.2:79083842-79083861 | None:intergenic | 35.0% | |
| CGATTATAATAAAGCCCACA+AGG | - | chr3.2:79082977-79082996 | None:intergenic | 35.0% | |
| CTTCTCAATCTCAAGTCAAT+GGG | + | chr3.2:79083780-79083799 | MS.gene06502:CDS | 35.0% | |
| GCAAATTTGCATGAGATATC+AGG | - | chr3.2:79082396-79082415 | None:intergenic | 35.0% | |
| GTTCGTTACAAAAACACCAA+AGG | + | chr3.2:79083736-79083755 | MS.gene06502:CDS | 35.0% | |
| GTTTCGAAACACGAAAGTAA+CGG | + | chr3.2:79083067-79083086 | MS.gene06502:CDS | 35.0% | |
| TAAACTAACGGTTCCGTTAA+GGG | - | chr3.2:79082880-79082899 | None:intergenic | 35.0% | |
| TACGTAGCTAAAACAAGACT+AGG | + | chr3.2:79082153-79082172 | MS.gene06502:CDS | 35.0% | |
| TCATGAGTATTTCAAGAAGG+TGG | + | chr3.2:79083121-79083140 | MS.gene06502:CDS | 35.0% | |
| TCTATTGCTTATGGGCTTAT+TGG | + | chr3.2:79083647-79083666 | MS.gene06502:CDS | 35.0% | |
| TCTTCTCAATCTCAAGTCAA+TGG | + | chr3.2:79083779-79083798 | MS.gene06502:CDS | 35.0% | |
| TTCTCAATCTCAAGTCAATG+GGG | + | chr3.2:79083781-79083800 | MS.gene06502:CDS | 35.0% | |
| ! | ATTTTGTCTCCGTGATAGAA+TGG | + | chr3.2:79082929-79082948 | MS.gene06502:CDS | 35.0% |
| ! | CTCAAAATTTCCGTTTTCGT+CGG | - | chr3.2:79083300-79083319 | None:intergenic | 35.0% |
| ! | GACGAAAACGGAAATTTTGA+GGG | + | chr3.2:79083299-79083318 | MS.gene06502:CDS | 35.0% |
| ! | GTGTTGAATATTTGGGATTG+GGG | + | chr3.2:79083689-79083708 | MS.gene06502:CDS | 35.0% |
| ! | TGTTGAATATTTGGGATTGG+GGG | + | chr3.2:79083690-79083709 | MS.gene06502:CDS | 35.0% |
| ! | TTAGTACTATTTGGCTCCTT+TGG | - | chr3.2:79083755-79083774 | None:intergenic | 35.0% |
| ! | TTTTCGTAACAGCAATTTCG+TGG | + | chr3.2:79083045-79083064 | MS.gene06502:CDS | 35.0% |
| !! | GCGTTAAGTTTTAACAGCAT+AGG | + | chr3.2:79083176-79083195 | MS.gene06502:CDS | 35.0% |
| !!! | AGTTTTGATGATGAGATCAG+TGG | + | chr3.2:79083550-79083569 | MS.gene06502:CDS | 35.0% |
| !!! | GCATAGGAAAAGGGTATTTT+TGG | + | chr3.2:79083192-79083211 | MS.gene06502:CDS | 35.0% |
| !!! | GTTGTTTTTTACACCGTTGT+TGG | + | chr3.2:79083481-79083500 | MS.gene06502:CDS | 35.0% |
| !!! | TAGTCTTGTTTTAGCTACGT+AGG | - | chr3.2:79082154-79082173 | None:intergenic | 35.0% |
| AGTATCATTGTCACAAACGC+AGG | - | chr3.2:79083611-79083630 | None:intergenic | 40.0% | |
| ATACTCATGAGCTGAATCAC+CGG | - | chr3.2:79083111-79083130 | None:intergenic | 40.0% | |
| ATCGGGCTTCAAAACAATCA+AGG | + | chr3.2:79082762-79082781 | MS.gene06502:CDS | 40.0% | |
| ATCTCTACCTCAAACTGTAC+CGG | + | chr3.2:79082348-79082367 | MS.gene06502:CDS | 40.0% | |
| CATGATGAAGCAACCAATGA+GGG | - | chr3.2:79082493-79082512 | None:intergenic | 40.0% | |
| CGTTTATTGAGTCTTCAACG+GGG | + | chr3.2:79083396-79083415 | MS.gene06502:CDS | 40.0% | |
| GAACGTTGTATTCTATGGCA+AGG | + | chr3.2:79083261-79083280 | MS.gene06502:CDS | 40.0% | |
| GACAGGAACGTTGTATTCTA+TGG | + | chr3.2:79083256-79083275 | MS.gene06502:CDS | 40.0% | |
| GCGTTTATTGAGTCTTCAAC+GGG | + | chr3.2:79083395-79083414 | MS.gene06502:CDS | 40.0% | |
| GGCGTTTATTGAGTCTTCAA+CGG | + | chr3.2:79083394-79083413 | MS.gene06502:CDS | 40.0% | |
| GTAAACTAACGGTTCCGTTA+AGG | - | chr3.2:79082881-79082900 | None:intergenic | 40.0% | |
| GTCAAACTGATCAACCTCAA+AGG | + | chr3.2:79082076-79082095 | MS.gene06502:CDS | 40.0% | |
| GTGAAAGGAGCAATGATCTA+CGG | + | chr3.2:79083017-79083036 | MS.gene06502:CDS | 40.0% | |
| TAGTTTACTTCCAGGTGGAA+CGG | + | chr3.2:79082893-79082912 | MS.gene06502:CDS | 40.0% | |
| TATGGGCTTATTGGTGTGAT+TGG | + | chr3.2:79083656-79083675 | MS.gene06502:CDS | 40.0% | |
| TCATCCACTTTAGTCACACT+CGG | + | chr3.2:79082807-79082826 | MS.gene06502:CDS | 40.0% | |
| TCCACCTGGAAGTAAACTAA+CGG | - | chr3.2:79082892-79082911 | None:intergenic | 40.0% | |
| TTGCGACGATCAAGTCTTTA+CGG | - | chr3.2:79082458-79082477 | None:intergenic | 40.0% | |
| TTGGGCTTTCCATTCTATCA+CGG | - | chr3.2:79082941-79082960 | None:intergenic | 40.0% | |
| ! | AGTTTGAGGTAGAGATGGAT+GGG | - | chr3.2:79082344-79082363 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGAGATTGATT+GGG | + | chr3.2:79083565-79083584 | MS.gene06502:CDS | 40.0% |
| ! | CGACGAAAACGGAAATTTTG+AGG | + | chr3.2:79083298-79083317 | MS.gene06502:CDS | 40.0% |
| ! | CTCATTGGTTGCTTCATCAT+GGG | + | chr3.2:79082492-79082511 | MS.gene06502:CDS | 40.0% |
| ! | GCTGAATGAGATGAAGTGTT+GGG | - | chr3.2:79082374-79082393 | None:intergenic | 40.0% |
| ! | GCTTTTGCTAATCTCCCTTT+AGG | + | chr3.2:79082516-79082535 | MS.gene06502:CDS | 40.0% |
| !! | ACGGGTTTTATCAAGACAAG+CGG | - | chr3.2:79082439-79082458 | None:intergenic | 40.0% |
| !! | ATTGGGGGTTTGAGATTTTG+GGG | + | chr3.2:79083705-79083724 | MS.gene06502:CDS | 40.0% |
| !! | GATTGGGGGTTTGAGATTTT+GGG | + | chr3.2:79083704-79083723 | MS.gene06502:CDS | 40.0% |
| !! | TTTGATGATGAGATCAGTGG+TGG | + | chr3.2:79083553-79083572 | MS.gene06502:CDS | 40.0% |
| !!! | TTGAGATTTTGGGGCACTAT+GGG | + | chr3.2:79083714-79083733 | MS.gene06502:CDS | 40.0% |
| !!! | TTTGAGATTTTGGGGCACTA+TGG | + | chr3.2:79083713-79083732 | MS.gene06502:CDS | 40.0% |
| AAAACTTAACGCACCTGCTG+TGG | - | chr3.2:79083168-79083187 | None:intergenic | 45.0% | |
| AAATTTGCCCCTGTTAACCC+GGG | + | chr3.2:79082408-79082427 | MS.gene06502:CDS | 45.0% | |
| ACTCCCACTAAAATCAACGG+TGG | - | chr3.2:79083533-79083552 | None:intergenic | 45.0% | |
| ATAAGAGAAGGGGGAAGAAC+GGG | + | chr3.2:79083419-79083438 | MS.gene06502:CDS | 45.0% | |
| CAAATTTGCCCCTGTTAACC+CGG | + | chr3.2:79082407-79082426 | MS.gene06502:CDS | 45.0% | |
| CACACGATAAAATCCACAGC+AGG | + | chr3.2:79083152-79083171 | MS.gene06502:CDS | 45.0% | |
| CCATGATGAAGCAACCAATG+AGG | - | chr3.2:79082494-79082513 | None:intergenic | 45.0% | |
| CTTCAACGGGGATAAGAGAA+GGG | + | chr3.2:79083408-79083427 | MS.gene06502:CDS | 45.0% | |
| GACTCAATAAACGCCGTTAC+CGG | - | chr3.2:79083389-79083408 | None:intergenic | 45.0% | |
| GATAAGAGAAGGGGGAAGAA+CGG | + | chr3.2:79083418-79083437 | MS.gene06502:CDS | 45.0% | |
| GGCTGAATGAGATGAAGTGT+TGG | - | chr3.2:79082375-79082394 | None:intergenic | 45.0% | |
| GGTGAAAGTGGAGTTACGTT+GGG | - | chr3.2:79082196-79082215 | None:intergenic | 45.0% | |
| GTCGTTGTTAGGAACTTCAC+CGG | + | chr3.2:79083367-79083386 | MS.gene06502:CDS | 45.0% | |
| GTTAGGAACTTCACCGGTAA+CGG | + | chr3.2:79083373-79083392 | MS.gene06502:CDS | 45.0% | |
| TACTTTGCTTACACCGTCGT+GGG | + | chr3.2:79082567-79082586 | MS.gene06502:CDS | 45.0% | |
| TATTCTATGGCAAGGTTCGC+AGG | + | chr3.2:79083269-79083288 | MS.gene06502:CDS | 45.0% | |
| TCAATCTCAAGTCAATGGGG+TGG | + | chr3.2:79083784-79083803 | MS.gene06502:CDS | 45.0% | |
| TCTTCAACGGGGATAAGAGA+AGG | + | chr3.2:79083407-79083426 | MS.gene06502:CDS | 45.0% | |
| TGAACAGAGAGGGACACAAT+CGG | - | chr3.2:79082319-79082338 | None:intergenic | 45.0% | |
| TGCGACGATCAAGTCTTTAC+GGG | - | chr3.2:79082457-79082476 | None:intergenic | 45.0% | |
| TGGTGAAAGTGGAGTTACGT+TGG | - | chr3.2:79082197-79082216 | None:intergenic | 45.0% | |
| TTACTTTGCTTACACCGTCG+TGG | + | chr3.2:79082566-79082585 | MS.gene06502:CDS | 45.0% | |
| TTCAACGGGGATAAGAGAAG+GGG | + | chr3.2:79083409-79083428 | MS.gene06502:CDS | 45.0% | |
| ! | ACCGTTAGTTTACTTCCAGG+TGG | + | chr3.2:79082888-79082907 | MS.gene06502:CDS | 45.0% |
| ! | ATGGATGGGTTTGAACAGAG+AGG | - | chr3.2:79082330-79082349 | None:intergenic | 45.0% |
| ! | CAGTTTGAGGTAGAGATGGA+TGG | - | chr3.2:79082345-79082364 | None:intergenic | 45.0% |
| ! | CCTCATTGGTTGCTTCATCA+TGG | + | chr3.2:79082491-79082510 | MS.gene06502:CDS | 45.0% |
| ! | GATCAGTGGTGGAGATTGAT+TGG | + | chr3.2:79083564-79083583 | MS.gene06502:CDS | 45.0% |
| ! | GCCTCCATTCTAACTGATTC+CGG | + | chr3.2:79082276-79082295 | MS.gene06502:CDS | 45.0% |
| ! | GGAACCGTTAGTTTACTTCC+AGG | + | chr3.2:79082885-79082904 | MS.gene06502:CDS | 45.0% |
| ! | GGTACAGTTTGAGGTAGAGA+TGG | - | chr3.2:79082349-79082368 | None:intergenic | 45.0% |
| ! | TCCATTCTAACTGATTCCGG+CGG | + | chr3.2:79082279-79082298 | MS.gene06502:CDS | 45.0% |
| ! | TGGATGGGTTTGAACAGAGA+GGG | - | chr3.2:79082329-79082348 | None:intergenic | 45.0% |
| !! | AATGAGATGAAGTGTTGGGC+CGG | - | chr3.2:79082370-79082389 | None:intergenic | 45.0% |
| !! | AGTTAGAATGGAGGCGTTGA+CGG | - | chr3.2:79082271-79082290 | None:intergenic | 45.0% |
| !! | GAGCTTATTCTAACGGGCTT+TGG | - | chr3.2:79082711-79082730 | None:intergenic | 45.0% |
| !! | GGATTGGGGGTTTGAGATTT+TGG | + | chr3.2:79083703-79083722 | MS.gene06502:CDS | 45.0% |
| !! | GGCTTTTTCTCGCTTTCATC+GGG | + | chr3.2:79082745-79082764 | MS.gene06502:CDS | 45.0% |
| !! | GGGCTTTTTCTCGCTTTCAT+CGG | + | chr3.2:79082744-79082763 | MS.gene06502:CDS | 45.0% |
| !! | TAGGTGTTGAAGCGAGAGAT+GGG | - | chr3.2:79082135-79082154 | None:intergenic | 45.0% |
| !!! | AGGGTATTTTTGGGAAGCTG+TGG | + | chr3.2:79083202-79083221 | MS.gene06502:CDS | 45.0% |
| !!! | GGACCACCGTTGATTTTAGT+GGG | + | chr3.2:79083527-79083546 | MS.gene06502:CDS | 45.0% |
| !!! | GGTGGCGGGTTATTTTTTCA+TGG | + | chr3.2:79083457-79083476 | MS.gene06502:CDS | 45.0% |
| !!! | TGGACCACCGTTGATTTTAG+TGG | + | chr3.2:79083526-79083545 | MS.gene06502:CDS | 45.0% |
| AAAGAAGCCCGTGATGAGCT+TGG | - | chr3.2:79082840-79082859 | None:intergenic | 50.0% | |
| AAGAAGCCCGTGATGAGCTT+GGG | - | chr3.2:79082839-79082858 | None:intergenic | 50.0% | |
| ACCAATGAGGGAAGAAGCCA+CGG | - | chr3.2:79082481-79082500 | None:intergenic | 50.0% | |
| ACCACCGAGTGTGACTAAAG+TGG | - | chr3.2:79082814-79082833 | None:intergenic | 50.0% | |
| ACTAACGGTTCCGTTAAGGG+CGG | - | chr3.2:79082877-79082896 | None:intergenic | 50.0% | |
| AGCGAGAAAAAGCCCGATAC+CGG | - | chr3.2:79082739-79082758 | None:intergenic | 50.0% | |
| ATACCTGGAGCAAGGCCTAA+AGG | - | chr3.2:79082534-79082553 | None:intergenic | 50.0% | |
| CCGGTTATAACCGCCCTTAA+CGG | + | chr3.2:79082864-79082883 | MS.gene06502:CDS | 50.0% | |
| CCGTTAAGGGCGGTTATAAC+CGG | - | chr3.2:79082867-79082886 | None:intergenic | 50.0% | |
| GAAAGCCCAACACTCTGGTT+GGG | + | chr3.2:79082951-79082970 | MS.gene06502:CDS | 50.0% | |
| GAATGGAAAGCCCAACACTC+TGG | + | chr3.2:79082946-79082965 | MS.gene06502:CDS | 50.0% | |
| GCAGGTTTCACCGACGAAAA+CGG | + | chr3.2:79083287-79083306 | MS.gene06502:CDS | 50.0% | |
| GCCGGAATCAGTTAGAATGG+AGG | - | chr3.2:79082280-79082299 | None:intergenic | 50.0% | |
| GCGGAGGAGCTTATTCTAAC+GGG | - | chr3.2:79082717-79082736 | None:intergenic | 50.0% | |
| GCTTTGGTAGGAGATAGTGC+CGG | - | chr3.2:79082604-79082623 | None:intergenic | 50.0% | |
| GGCGGAGGAGCTTATTCTAA+CGG | - | chr3.2:79082718-79082737 | None:intergenic | 50.0% | |
| GTTAGAATAAGCTCCTCCGC+CGG | + | chr3.2:79082717-79082736 | MS.gene06502:CDS | 50.0% | |
| TAAGAGAAGGGGGAAGAACG+GGG | + | chr3.2:79083420-79083439 | MS.gene06502:CDS | 50.0% | |
| TAAGCGTTTGAGCCCATACC+TGG | - | chr3.2:79082549-79082568 | None:intergenic | 50.0% | |
| TACCTGGAGCAAGGCCTAAA+GGG | - | chr3.2:79082533-79082552 | None:intergenic | 50.0% | |
| TCAACGGGGATAAGAGAAGG+GGG | + | chr3.2:79083410-79083429 | MS.gene06502:CDS | 50.0% | |
| TCCACTTTAGTCACACTCGG+TGG | + | chr3.2:79082810-79082829 | MS.gene06502:CDS | 50.0% | |
| TCCGCCGGAATCAGTTAGAA+TGG | - | chr3.2:79082283-79082302 | None:intergenic | 50.0% | |
| TTAGGCCTTGCTCCAGGTAT+GGG | + | chr3.2:79082534-79082553 | MS.gene06502:CDS | 50.0% | |
| TTTAGGCCTTGCTCCAGGTA+TGG | + | chr3.2:79082533-79082552 | MS.gene06502:CDS | 50.0% | |
| ! | AACGGCTACTTTCCTCACCA+TGG | + | chr3.2:79082233-79082252 | MS.gene06502:CDS | 50.0% |
| ! | ATTGTGGTGGGGTCGTTGTT+AGG | + | chr3.2:79083356-79083375 | MS.gene06502:CDS | 50.0% |
| ! | CTCGCAGCAGTTTTCATCGA+AGG | + | chr3.2:79082627-79082646 | MS.gene06502:CDS | 50.0% |
| !! | AATCAAGGTATCGGGCTCGT+TGG | + | chr3.2:79082777-79082796 | MS.gene06502:CDS | 50.0% |
| !! | ACCGTTGTTGGCTTCGATTC+CGG | + | chr3.2:79083493-79083512 | MS.gene06502:CDS | 50.0% |
| !! | ATCAAGGTATCGGGCTCGTT+GGG | + | chr3.2:79082778-79082797 | MS.gene06502:CDS | 50.0% |
| !! | GTAGGTGTTGAAGCGAGAGA+TGG | - | chr3.2:79082136-79082155 | None:intergenic | 50.0% |
| AAACTGCTGCGAGTGCGCTT+TGG | - | chr3.2:79082620-79082639 | None:intergenic | 55.0% | |
| AACACTCTGGTTGGGCCTTG+TGG | + | chr3.2:79082959-79082978 | MS.gene06502:CDS | 55.0% | |
| ACAAGGCCCAACCAGAGTGT+TGG | - | chr3.2:79082960-79082979 | None:intergenic | 55.0% | |
| ACCGTGGCTTCTTCCCTCAT+TGG | + | chr3.2:79082477-79082496 | MS.gene06502:CDS | 55.0% | |
| AGACTTGATCGTCGCAACCG+TGG | + | chr3.2:79082461-79082480 | MS.gene06502:CDS | 55.0% | |
| AGGGGGAAGAACGGGGATAA+CGG | + | chr3.2:79083427-79083446 | MS.gene06502:CDS | 55.0% | |
| ATAAGCTCCTCCGCCGGTAT+CGG | + | chr3.2:79082723-79082742 | MS.gene06502:CDS | 55.0% | |
| ATCACGGGCTTCTTTAGCGC+CGG | + | chr3.2:79082845-79082864 | MS.gene06502:CDS | 55.0% | |
| CGAGGATGTAAGCCATGGTG+AGG | - | chr3.2:79082248-79082267 | None:intergenic | 55.0% | |
| CTCATGAGCTGAATCACCGG+CGG | - | chr3.2:79083108-79083127 | None:intergenic | 55.0% | |
| CTTCCAGGTGGAACGGTTTC+TGG | + | chr3.2:79082900-79082919 | MS.gene06502:CDS | 55.0% | |
| GAGAAAAAGCCCGATACCGG+CGG | - | chr3.2:79082736-79082755 | None:intergenic | 55.0% | |
| GCCGGAATCGAAGCCAACAA+CGG | - | chr3.2:79083497-79083516 | None:intergenic | 55.0% | |
| GGAAACAGAGCATGTTCCGC+CGG | - | chr3.2:79082298-79082317 | None:intergenic | 55.0% | |
| GGAAAGCCCAACACTCTGGT+TGG | + | chr3.2:79082950-79082969 | MS.gene06502:CDS | 55.0% | |
| GGTGAGGAAAGTAGCCGTTC+CGG | - | chr3.2:79082232-79082251 | None:intergenic | 55.0% | |
| GTGGACATTCTCGACACGAC+AGG | + | chr3.2:79083239-79083258 | MS.gene06502:CDS | 55.0% | |
| GTGGTTGCCCAAGCTCATCA+CGG | + | chr3.2:79082829-79082848 | MS.gene06502:CDS | 55.0% | |
| TACACCGTCGTGGGCTTTCA+TGG | + | chr3.2:79082576-79082595 | MS.gene06502:CDS | 55.0% | |
| TCAAGACAAGCGGCATAGCC+CGG | - | chr3.2:79082429-79082448 | None:intergenic | 55.0% | |
| TCACCAGAAACCGTTCCACC+TGG | - | chr3.2:79082906-79082925 | None:intergenic | 55.0% | |
| TGGTTGCCCAAGCTCATCAC+GGG | + | chr3.2:79082830-79082849 | MS.gene06502:CDS | 55.0% | |
| TGTTGGGCCGGTACAGTTTG+AGG | - | chr3.2:79082358-79082377 | None:intergenic | 55.0% | |
| TTGAGCCCATACCTGGAGCA+AGG | - | chr3.2:79082542-79082561 | None:intergenic | 55.0% | |
| ! | AACGGGGATAACGGCGTTGA+CGG | + | chr3.2:79083436-79083455 | MS.gene06502:CDS | 55.0% |
| ! | ACACTCTGGTTGGGCCTTGT+GGG | + | chr3.2:79082960-79082979 | MS.gene06502:CDS | 55.0% |
| ! | ACGGAGTTCGGTGGTGAAAG+TGG | - | chr3.2:79082208-79082227 | None:intergenic | 55.0% |
| ! | AGATGGGCTTTGTGTGGGCT+TGG | - | chr3.2:79082119-79082138 | None:intergenic | 55.0% |
| ! | AGCGAGAGATGGGCTTTGTG+TGG | - | chr3.2:79082125-79082144 | None:intergenic | 55.0% |
| ! | ATGCCACGTCGATTGTGGTG+GGG | + | chr3.2:79083345-79083364 | MS.gene06502:CDS | 55.0% |
| ! | CAAGGCCCAACCAGAGTGTT+GGG | - | chr3.2:79082959-79082978 | None:intergenic | 55.0% |
| ! | GATGCCACGTCGATTGTGGT+GGG | + | chr3.2:79083344-79083363 | MS.gene06502:CDS | 55.0% |
| ! | GCGAGAGATGGGCTTTGTGT+GGG | - | chr3.2:79082124-79082143 | None:intergenic | 55.0% |
| ! | GTTGGCTTCGATTCCGGCTT+GGG | + | chr3.2:79083499-79083518 | MS.gene06502:CDS | 55.0% |
| !! | TCGATTCCGGCTTGGGCTAT+TGG | + | chr3.2:79083506-79083525 | MS.gene06502:CDS | 55.0% |
| !! | TGTTGGCTTCGATTCCGGCT+TGG | + | chr3.2:79083498-79083517 | MS.gene06502:CDS | 55.0% |
| AAAAAGCCCGATACCGGCGG+AGG | - | chr3.2:79082733-79082752 | None:intergenic | 60.0% | |
| ATGAGCTGAATCACCGGCGG+CGG | - | chr3.2:79083105-79083124 | None:intergenic | 60.0% | |
| CAAGACAAGCGGCATAGCCC+GGG | - | chr3.2:79082428-79082447 | None:intergenic | 60.0% | |
| CGGCATAGCCCGGGTTAACA+GGG | - | chr3.2:79082419-79082438 | None:intergenic | 60.0% | |
| CTCCCTTTAGGCCTTGCTCC+AGG | + | chr3.2:79082528-79082547 | MS.gene06502:CDS | 60.0% | |
| GACGGCGAGGATGTAAGCCA+TGG | - | chr3.2:79082253-79082272 | None:intergenic | 60.0% | |
| GGAAAGTAGCCGTTCCGGCA+CGG | - | chr3.2:79082227-79082246 | None:intergenic | 60.0% | |
| GGAGCCATGAAAGCCCACGA+CGG | - | chr3.2:79082583-79082602 | None:intergenic | 60.0% | |
| GGCATAGCCCGGGTTAACAG+GGG | - | chr3.2:79082418-79082437 | None:intergenic | 60.0% | |
| GGTGGTCCAATAGCCCAAGC+CGG | - | chr3.2:79083515-79083534 | None:intergenic | 60.0% | |
| GTCGTGGGCTTTCATGGCTC+CGG | + | chr3.2:79082582-79082601 | MS.gene06502:CDS | 60.0% | |
| TAAGCTCCTCCGCCGGTATC+GGG | + | chr3.2:79082724-79082743 | MS.gene06502:CDS | 60.0% | |
| TGCTGCGAGTGCGCTTTGGT+AGG | - | chr3.2:79082616-79082635 | None:intergenic | 60.0% | |
| TTCACCACCGAACTCCGTGC+CGG | + | chr3.2:79082210-79082229 | MS.gene06502:CDS | 60.0% | |
| ! | GGATGCCACGTCGATTGTGG+TGG | + | chr3.2:79083343-79083362 | MS.gene06502:CDS | 60.0% |
| ! | GGGCTTTGTGTGGGCTTGGT+GGG | - | chr3.2:79082115-79082134 | None:intergenic | 60.0% |
| ! | GTCGGATGCCACGTCGATTG+TGG | + | chr3.2:79083340-79083359 | MS.gene06502:CDS | 60.0% |
| ! | TGGGCTTTGTGTGGGCTTGG+TGG | - | chr3.2:79082116-79082135 | None:intergenic | 60.0% |
| !! | ATAACGGCGTTGACGGTGGC+GGG | + | chr3.2:79083443-79083462 | MS.gene06502:CDS | 60.0% |
| !! | GATAACGGCGTTGACGGTGG+CGG | + | chr3.2:79083442-79083461 | MS.gene06502:CDS | 60.0% |
| !! | TTTGTGTGGGCTTGGTGGGC+TGG | - | chr3.2:79082111-79082130 | None:intergenic | 60.0% |
| AGCCGTTCCGGCACGGAGTT+CGG | - | chr3.2:79082220-79082239 | None:intergenic | 65.0% | |
| CACCGAACTCCGTGCCGGAA+CGG | + | chr3.2:79082215-79082234 | MS.gene06502:CDS | 65.0% | |
| CGACCCCACCACAATCGACG+TGG | - | chr3.2:79083351-79083370 | None:intergenic | 65.0% | |
| GAATCACCGGCGGCGGTGTT+AGG | - | chr3.2:79083098-79083117 | None:intergenic | 65.0% | |
| GCGGCATAGCCCGGGTTAAC+AGG | - | chr3.2:79082420-79082439 | None:intergenic | 65.0% | |
| GCGTTTCCTAACACCGCCGC+CGG | + | chr3.2:79083089-79083108 | MS.gene06502:CDS | 65.0% | |
| GCTGGAAGTGGGGGCCTTTG+AGG | - | chr3.2:79082093-79082112 | None:intergenic | 65.0% | |
| !! | GAATGGAGGCGTTGACGGCG+AGG | - | chr3.2:79082266-79082285 | None:intergenic | 65.0% |
| !! | GCTTGGTGGGCTGGAAGTGG+GGG | - | chr3.2:79082102-79082121 | None:intergenic | 65.0% |
| !! | GGCTTGGTGGGCTGGAAGTG+GGG | - | chr3.2:79082103-79082122 | None:intergenic | 65.0% |
| !! | GGGCTTGGTGGGCTGGAAGT+GGG | - | chr3.2:79082104-79082123 | None:intergenic | 65.0% |
| !! | GGGGATAACGGCGTTGACGG+TGG | + | chr3.2:79083439-79083458 | MS.gene06502:CDS | 65.0% |
| !! | TGGGCTTGGTGGGCTGGAAG+TGG | - | chr3.2:79082105-79082124 | None:intergenic | 65.0% |
| CGTTCCGGCACGGAGTTCGG+TGG | - | chr3.2:79082217-79082236 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79082069 | 79083874 | 79082069 | ID=MS.gene06502 |
| chr3.2 | mRNA | 79082069 | 79083874 | 79082069 | ID=MS.gene06502.t1;Parent=MS.gene06502 |
| chr3.2 | exon | 79082069 | 79083874 | 79082069 | ID=MS.gene06502.t1.exon1;Parent=MS.gene06502.t1 |
| chr3.2 | CDS | 79082069 | 79083874 | 79082069 | ID=cds.MS.gene06502.t1;Parent=MS.gene06502.t1 |
| Gene Sequence |
| Protein sequence |
