Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049377.t1 | XP_013461539.1 | 98.3 | 602 | 8 | 2 | 1 | 602 | 3 | 602 | 0.00E+00 | 1142.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049377.t1 | Q9SRK7 | 79.1 | 561 | 117 | 0 | 21 | 581 | 19 | 579 | 2.2e-257 | 889.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049377.t1 | A0A072V0M1 | 98.3 | 602 | 8 | 2 | 1 | 602 | 3 | 602 | 0.0e+00 | 1142.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049377 | MS.gene06502 | 0.935746 | 5.22E-97 | -1.69E-46 |
| MS.gene049377 | MS.gene31058 | 0.916954 | 9.56E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35464 | MS.gene049377 | PPI |
| MS.gene022431 | MS.gene049377 | PPI |
| MS.gene98272 | MS.gene049377 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049377.t1 | MTR_3g094320 | 98.339 | 602 | 8 | 2 | 1 | 602 | 3 | 602 | 0.0 | 1200 |
| MS.gene049377.t1 | MTR_3g075120 | 49.117 | 566 | 242 | 7 | 20 | 583 | 18 | 539 | 1.08e-174 | 506 |
| MS.gene049377.t1 | MTR_7g072600 | 80.263 | 76 | 15 | 0 | 205 | 280 | 18 | 93 | 1.35e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049377.t1 | AT3G10960 | 78.284 | 571 | 122 | 1 | 13 | 581 | 9 | 579 | 0.0 | 934 |
| MS.gene049377.t1 | AT5G50300 | 52.199 | 523 | 210 | 6 | 24 | 546 | 16 | 498 | 0.0 | 524 |
| MS.gene049377.t1 | AT5G50300 | 52.299 | 522 | 209 | 6 | 25 | 546 | 34 | 515 | 0.0 | 524 |
Find 185 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTGTGTTGAATATT+TGG | 0.076406 | 3.1:+75468734 | MS.gene049377:CDS |
| CTTCCAGGTGGAACGGTTTC+TGG | 0.122948 | 3.1:+75467953 | MS.gene049377:CDS |
| TTGACGTATTCTATTGCTTA+TGG | 0.169383 | 3.1:+75468691 | MS.gene049377:CDS |
| TCTATTGCTTATGGGCTTAT+TGG | 0.196928 | 3.1:+75468700 | MS.gene049377:CDS |
| GAGGAATTATTAGTACTATT+TGG | 0.227837 | 3.1:-75468814 | None:intergenic |
| GCGGCATAGCCCGGGTTAAC+AGG | 0.231130 | 3.1:-75467470 | None:intergenic |
| TGGGCTTGGTGGGCTGGAAG+TGG | 0.265248 | 3.1:-75467155 | None:intergenic |
| TTTGTGTGGGCTTGGTGGGC+TGG | 0.270309 | 3.1:-75467161 | None:intergenic |
| AGTTGTAGTGCTTTAGCATT+TGG | 0.276034 | 3.1:-75468895 | None:intergenic |
| GGCTTGGTGGGCTGGAAGTG+GGG | 0.285194 | 3.1:-75467153 | None:intergenic |
| TGACGTATTCTATTGCTTAT+GGG | 0.291944 | 3.1:+75468692 | MS.gene049377:CDS |
| TTAGTACTATTTGGCTCCTT+TGG | 0.300708 | 3.1:-75468805 | None:intergenic |
| CCTCATTGGTTGCTTCATCA+TGG | 0.302903 | 3.1:+75467544 | MS.gene049377:CDS |
| GGGCTTGGTGGGCTGGAAGT+GGG | 0.307342 | 3.1:-75467154 | None:intergenic |
| ACACTCTGGTTGGGCCTTGT+GGG | 0.309150 | 3.1:+75468013 | MS.gene049377:CDS |
| ACCGTGGCTTCTTCCCTCAT+TGG | 0.312133 | 3.1:+75467530 | MS.gene049377:CDS |
| GAGCTTATTCTAACGGGCTT+TGG | 0.315835 | 3.1:-75467761 | None:intergenic |
| GGGCTTTGTGTGGGCTTGGT+GGG | 0.322247 | 3.1:-75467165 | None:intergenic |
| GCAAATTTGCATGAGATATC+AGG | 0.323440 | 3.1:-75467446 | None:intergenic |
| GTTGGCTTCGATTCCGGCTT+GGG | 0.323785 | 3.1:+75468552 | MS.gene049377:CDS |
| CTCATTCTTCTCAAGTCAAT+GGG | 0.331558 | 3.1:+75468836 | MS.gene049377:CDS |
| TCGATTCCGGCTTGGGCTGT+TGG | 0.348572 | 3.1:+75468559 | MS.gene049377:CDS |
| TGGGCTTTGTGTGGGCTTGG+TGG | 0.351560 | 3.1:-75467166 | None:intergenic |
| ATTGTGGTGGGGTCGTTGTT+AGG | 0.353079 | 3.1:+75468409 | MS.gene049377:CDS |
| GCTTGGTGGGCTGGAAGTGG+GGG | 0.354232 | 3.1:-75467152 | None:intergenic |
| CTCATTGGTTGCTTCATCAT+GGG | 0.356545 | 3.1:+75467545 | MS.gene049377:CDS |
| GAATCACCGGCGGCGGTGTT+AGG | 0.356687 | 3.1:-75468148 | None:intergenic |
| TTTAGGCCTTGCTCCAGGTA+TGG | 0.357659 | 3.1:+75467586 | MS.gene049377:CDS |
| GACTCAATAAACGCCGTTAC+AGG | 0.360387 | 3.1:-75468439 | None:intergenic |
| ACCGTTGTTGGCTTCGATTC+CGG | 0.363246 | 3.1:+75468546 | MS.gene049377:CDS |
| AACACTCTGGTTGGGCCTTG+TGG | 0.368956 | 3.1:+75468012 | MS.gene049377:CDS |
| GTAAACTAACGGTTCCGTTA+AGG | 0.370350 | 3.1:-75467931 | None:intergenic |
| TGTGTTGAATATTTGGGATT+GGG | 0.370811 | 3.1:+75468741 | MS.gene049377:CDS |
| TATGGGCTTATTGGTGGGAT+TGG | 0.373153 | 3.1:+75468709 | MS.gene049377:CDS |
| TAAACTAACGGTTCCGTTAA+GGG | 0.373233 | 3.1:-75467930 | None:intergenic |
| TTACATTGTGTTGAATATTT+GGG | 0.373652 | 3.1:+75468735 | MS.gene049377:CDS |
| TCTCATTCTTCTCAAGTCAA+TGG | 0.378804 | 3.1:+75468835 | MS.gene049377:CDS |
| TGTTGGCTTCGATTCCGGCT+TGG | 0.388698 | 3.1:+75468551 | MS.gene049377:CDS |
| AGCCGTTCCGGCACGGAGTT+CGG | 0.388894 | 3.1:-75467270 | None:intergenic |
| GACAGGAACGTTGTATTCTA+TGG | 0.398225 | 3.1:+75468309 | MS.gene049377:CDS |
| TTAGGCCTTGCTCCAGGTAT+GGG | 0.400907 | 3.1:+75467587 | MS.gene049377:CDS |
| TTCTTACTCATTTCATCAGT+CGG | 0.402497 | 3.1:+75467710 | MS.gene049377:CDS |
| TTGCGACGATCAAGTCTTTA+CGG | 0.404816 | 3.1:-75467508 | None:intergenic |
| GTGTTGAATATTTGGGATTG+GGG | 0.406876 | 3.1:+75468742 | MS.gene049377:CDS |
| CAAGGCCCAACCAGAGTGTT+GGG | 0.421403 | 3.1:-75468009 | None:intergenic |
| AGATGGGCTTTGTGTGGGCT+TGG | 0.423297 | 3.1:-75467169 | None:intergenic |
| TACACCGTCGTGGGCTTTCA+CGG | 0.424117 | 3.1:+75467629 | MS.gene049377:CDS |
| CCGTTAAGGGCGGTTATAAC+CGG | 0.427393 | 3.1:-75467917 | None:intergenic |
| TATTCTATGGCAAGGTTCGC+AGG | 0.427768 | 3.1:+75468322 | MS.gene049377:CDS |
| GCCTCCATTCTAACTGATTC+CGG | 0.430705 | 3.1:+75467329 | MS.gene049377:CDS |
| TTGTGTTGAATATTTGGGAT+TGG | 0.433005 | 3.1:+75468740 | MS.gene049377:CDS |
| AGTTAGAATGGAGGCGTTGA+CGG | 0.433565 | 3.1:-75467321 | None:intergenic |
| ATCAAGGTATCGGGCTCGTT+GGG | 0.436910 | 3.1:+75467831 | MS.gene049377:CDS |
| GATCAGTGGTGGAGATTGAT+TGG | 0.437552 | 3.1:+75468617 | MS.gene049377:CDS |
| GCGTTTATTGAGTCTTCAAC+GGG | 0.437581 | 3.1:+75468448 | MS.gene049377:CDS |
| CAAATTTGCCCCTGTTAACC+CGG | 0.439914 | 3.1:+75467460 | MS.gene049377:CDS |
| TTGCTTATGGGCTTATTGGT+GGG | 0.440354 | 3.1:+75468704 | MS.gene049377:CDS |
| TCAAGACAAGCGGCATAGCC+CGG | 0.441522 | 3.1:-75467479 | None:intergenic |
| ATTGCTTATGGGCTTATTGG+TGG | 0.443433 | 3.1:+75468703 | MS.gene049377:CDS |
| TAAGCGTTTGAGCCCATACC+TGG | 0.449378 | 3.1:-75467599 | None:intergenic |
| TACCTGGAGCAAGGCCTAAA+GGG | 0.453864 | 3.1:-75467583 | None:intergenic |
| GCAGGTTTCACCGACGAAAA+CGG | 0.454776 | 3.1:+75468340 | MS.gene049377:CDS |
| AACGGGGATAACGGCGTTGA+CGG | 0.457237 | 3.1:+75468489 | MS.gene049377:CDS |
| TAAGCTCCTCCGCCGGTATC+GGG | 0.458576 | 3.1:+75467777 | MS.gene049377:CDS |
| ATAAGCTCCTCCGCCGGTAT+CGG | 0.462080 | 3.1:+75467776 | MS.gene049377:CDS |
| AGTTTGAGGTAGAGATGGAT+GGG | 0.464799 | 3.1:-75467394 | None:intergenic |
| TGTTGGGCCGGTACAGTTTG+AGG | 0.465795 | 3.1:-75467408 | None:intergenic |
| GATAACGGCGTTGACGGTGG+CGG | 0.470469 | 3.1:+75468495 | MS.gene049377:CDS |
| GCGGAGGAGCTTATTCTAAC+GGG | 0.470882 | 3.1:-75467767 | None:intergenic |
| CTTCAAAACAATCAAGGTAT+CGG | 0.473008 | 3.1:+75467821 | MS.gene049377:CDS |
| TGCGACGATCAAGTCTTTAC+GGG | 0.473171 | 3.1:-75467507 | None:intergenic |
| GGAACCGTTAGTTTACTTCC+AGG | 0.476049 | 3.1:+75467938 | MS.gene049377:CDS |
| GAAAGCCCAACACTCTGGTT+GGG | 0.477055 | 3.1:+75468004 | MS.gene049377:CDS |
| ATCGGGCTTCAAAACAATCA+AGG | 0.478586 | 3.1:+75467815 | MS.gene049377:CDS |
| AAGAAGCCCGTGATGAGCTT+GGG | 0.478670 | 3.1:-75467889 | None:intergenic |
| GGTGAGGAAAGTAGCCGTTC+CGG | 0.483396 | 3.1:-75467282 | None:intergenic |
| CTCCCTTTAGGCCTTGCTCC+AGG | 0.484772 | 3.1:+75467581 | MS.gene049377:CDS |
| CGGCATAGCCCGGGTTAACA+GGG | 0.484866 | 3.1:-75467469 | None:intergenic |
| TACTTTGCTTACACCGTCGT+GGG | 0.484912 | 3.1:+75467620 | MS.gene049377:CDS |
| TTCAAAACAATCAAGGTATC+GGG | 0.488455 | 3.1:+75467822 | MS.gene049377:CDS |
| AAAGAAGCCCGTGATGAGCT+TGG | 0.488675 | 3.1:-75467890 | None:intergenic |
| GATGCCACGTCGATTGTGGT+GGG | 0.494246 | 3.1:+75468397 | MS.gene049377:CDS |
| CAGTTTGAGGTAGAGATGGA+TGG | 0.494890 | 3.1:-75467395 | None:intergenic |
| ATAACGGCGTTGACGGTGGC+GGG | 0.500012 | 3.1:+75468496 | MS.gene049377:CDS |
| CCGGTTATAACCGCCCTTAA+CGG | 0.501073 | 3.1:+75467917 | MS.gene049377:CDS |
| ACAAGGCCCAACCAGAGTGT+TGG | 0.502515 | 3.1:-75468010 | None:intergenic |
| GTCGTGGGCTTTCACGGCTC+CGG | 0.506156 | 3.1:+75467635 | MS.gene049377:CDS |
| AATCAAGGTATCGGGCTCGT+TGG | 0.506621 | 3.1:+75467830 | MS.gene049377:CDS |
| ATACCTGGAGCAAGGCCTAA+AGG | 0.511435 | 3.1:-75467584 | None:intergenic |
| GGAAAGCCCAACACTCTGGT+TGG | 0.517673 | 3.1:+75468003 | MS.gene049377:CDS |
| AAACTGCTGCGAGTGCGCTT+TGG | 0.520672 | 3.1:-75467670 | None:intergenic |
| GTGGTTGCCCAAGCTCATCA+CGG | 0.526556 | 3.1:+75467882 | MS.gene049377:CDS |
| GGTGAAAGTGGAGTTACGTT+GGG | 0.530487 | 3.1:-75467246 | None:intergenic |
| ATCTCTACCTCAAACTGTAC+CGG | 0.533272 | 3.1:+75467401 | MS.gene049377:CDS |
| AAAACTTAACGCACCTGCTG+TGG | 0.535615 | 3.1:-75468218 | None:intergenic |
| TCCGCCGGAATCAGTTAGAA+TGG | 0.535814 | 3.1:-75467333 | None:intergenic |
| TGGTTGCCCAAGCTCATCAC+GGG | 0.536796 | 3.1:+75467883 | MS.gene049377:CDS |
| GTGGACATTCTCGACACGAC+AGG | 0.538088 | 3.1:+75468292 | MS.gene049377:CDS |
| CAAGACAAGCGGCATAGCCC+GGG | 0.539731 | 3.1:-75467478 | None:intergenic |
| ACGGAGTTCGGTGGTGAAAG+TGG | 0.539970 | 3.1:-75467258 | None:intergenic |
| ATCACGGGCTTCTTTAGCGC+CGG | 0.540803 | 3.1:+75467898 | MS.gene049377:CDS |
| GAATGGAAAGCCCAACACTC+TGG | 0.545342 | 3.1:+75467999 | MS.gene049377:CDS |
| CACCGAACTCCGTGCCGGAA+CGG | 0.546674 | 3.1:+75467268 | MS.gene049377:CDS |
| ATCAGTGGTGGAGATTGATT+GGG | 0.550445 | 3.1:+75468618 | MS.gene049377:CDS |
| TTCTTCTCAAGTCAATGGGG+TGG | 0.551225 | 3.1:+75468840 | MS.gene049377:CDS |
| ATACTCATGAGCTGAATCAC+CGG | 0.551717 | 3.1:-75468161 | None:intergenic |
| GTCGGATGCCACGTCGATTG+TGG | 0.557591 | 3.1:+75468393 | MS.gene049377:CDS |
| TTACTTTGCTTACACCGTCG+TGG | 0.560920 | 3.1:+75467619 | MS.gene049377:CDS |
| AGCGAGAGATGGGCTTTGTG+TGG | 0.561400 | 3.1:-75467175 | None:intergenic |
| TTCAACGGGGATAAGAGAAG+GGG | 0.564344 | 3.1:+75468462 | MS.gene049377:CDS |
| TGAACAGAGAGGGACACAAT+CGG | 0.566224 | 3.1:-75467369 | None:intergenic |
| GGCGTTTATTGAGTCTTCAA+CGG | 0.566505 | 3.1:+75468447 | MS.gene049377:CDS |
| TAGTTTACTTCCAGGTGGAA+CGG | 0.566620 | 3.1:+75467946 | MS.gene049377:CDS |
| TCACCAGAAACCGTTCCACC+TGG | 0.568299 | 3.1:-75467956 | None:intergenic |
| AGCTCATGAGTATTTCAAGA+AGG | 0.569434 | 3.1:+75468171 | MS.gene049377:CDS |
| ATGAGCTGAATCACCGGCGG+CGG | 0.573355 | 3.1:-75468155 | None:intergenic |
| CATGATGAAGCAACCAATGA+GGG | 0.573818 | 3.1:-75467543 | None:intergenic |
| TAGGTGTTGAAGCGAGAGAT+GGG | 0.574642 | 3.1:-75467185 | None:intergenic |
| TGTTGAATATTTGGGATTGG+GGG | 0.574721 | 3.1:+75468743 | MS.gene049377:CDS |
| GTAGGTGTTGAAGCGAGAGA+TGG | 0.577020 | 3.1:-75467186 | None:intergenic |
| TTGGGCTTTCCATTCTATCA+CGG | 0.579130 | 3.1:-75467991 | None:intergenic |
| GCGTTTCCTAACACCGCCGC+CGG | 0.580860 | 3.1:+75468142 | MS.gene049377:CDS |
| GTTAGGAACTTCACCTGTAA+CGG | 0.583457 | 3.1:+75468426 | MS.gene049377:CDS |
| TTCACCACCGAACTCCGTGC+CGG | 0.584018 | 3.1:+75467263 | MS.gene049377:CDS |
| TTTGATGATGAGATCAGTGG+TGG | 0.585140 | 3.1:+75468606 | MS.gene049377:CDS |
| GCTGAATGAGATGAAGTGTT+GGG | 0.585209 | 3.1:-75467424 | None:intergenic |
| GGCTGAATGAGATGAAGTGT+TGG | 0.586143 | 3.1:-75467425 | None:intergenic |
| GCGAGAGATGGGCTTTGTGT+GGG | 0.587534 | 3.1:-75467174 | None:intergenic |
| GGTGGTCCAACAGCCCAAGC+CGG | 0.587935 | 3.1:-75468565 | None:intergenic |
| GTGAAAGGAGCAATGATCTA+CGG | 0.592507 | 3.1:+75468070 | MS.gene049377:CDS |
| GGGGATAACGGCGTTGACGG+TGG | 0.593326 | 3.1:+75468492 | MS.gene049377:CDS |
| GGATGCCACGTCGATTGTGG+TGG | 0.594421 | 3.1:+75468396 | MS.gene049377:CDS |
| TACGTAGCTAAAACAAGACT+AGG | 0.594536 | 3.1:+75467206 | MS.gene049377:CDS |
| GGTACAGTTTGAGGTAGAGA+TGG | 0.595273 | 3.1:-75467399 | None:intergenic |
| ACCAATGAGGGAAGAAGCCA+CGG | 0.598545 | 3.1:-75467531 | None:intergenic |
| CTTCAACGGGGATAAGAGAA+GGG | 0.601128 | 3.1:+75468461 | MS.gene049377:CDS |
| TTGAGCCCATACCTGGAGCA+AGG | 0.601157 | 3.1:-75467592 | None:intergenic |
| TCTTCAACGGGGATAAGAGA+AGG | 0.601843 | 3.1:+75468460 | MS.gene049377:CDS |
| GGCGGAGGAGCTTATTCTAA+CGG | 0.607380 | 3.1:-75467768 | None:intergenic |
| ACCACCGAGTGTGACTAAAG+TGG | 0.607913 | 3.1:-75467864 | None:intergenic |
| AACGGCTACTTTCCTCACCA+TGG | 0.608652 | 3.1:+75467286 | MS.gene049377:CDS |
| GAATGGAGGCGTTGACGGCG+AGG | 0.609867 | 3.1:-75467316 | None:intergenic |
| AAATTTGCCCCTGTTAACCC+GGG | 0.610985 | 3.1:+75467461 | MS.gene049377:CDS |
| TAAGCAATAGAATACGTCAA+AGG | 0.613028 | 3.1:-75468688 | None:intergenic |
| ATTGACTTGAGAAGAATGAG+AGG | 0.613087 | 3.1:-75468833 | None:intergenic |
| TGGTGAAAGTGGAGTTACGT+TGG | 0.613545 | 3.1:-75467247 | None:intergenic |
| GGAAAGTAGCCGTTCCGGCA+CGG | 0.613745 | 3.1:-75467277 | None:intergenic |
| GGAAACAGAGCATGTTCCGC+CGG | 0.618328 | 3.1:-75467348 | None:intergenic |
| TGCTGCGAGTGCGCTTTGGT+AGG | 0.618475 | 3.1:-75467666 | None:intergenic |
| TGGATGGGTTTGAACAGAGA+GGG | 0.620381 | 3.1:-75467379 | None:intergenic |
| GTCAAACTGATCAACCTCAA+AGG | 0.625363 | 3.1:+75467129 | MS.gene049377:CDS |
| GTTTCGAAACACGAAAGTAA+CGG | 0.626465 | 3.1:+75468120 | MS.gene049377:CDS |
| TCATGAGTATTTCAAGAAGG+TGG | 0.628281 | 3.1:+75468174 | MS.gene049377:CDS |
| CGATTATAATAAAGCCCACA+AGG | 0.628686 | 3.1:-75468027 | None:intergenic |
| ACCGTTAGTTTACTTCCAGG+TGG | 0.631433 | 3.1:+75467941 | MS.gene049377:CDS |
| AAACTGCATACTCAAATGGA+GGG | 0.632040 | 3.1:+75467107 | None:intergenic |
| GAACGTTGTATTCTATGGCA+AGG | 0.632846 | 3.1:+75468314 | MS.gene049377:CDS |
| CACACGATAAAATCCACAGC+AGG | 0.633084 | 3.1:+75468205 | MS.gene049377:CDS |
| AGTATCATTGTCACAAACGC+AGG | 0.635330 | 3.1:-75468661 | None:intergenic |
| TCATCCACTTTAGTCACACT+CGG | 0.635622 | 3.1:+75467860 | MS.gene049377:CDS |
| AATGAGATGAAGTGTTGGGC+CGG | 0.636832 | 3.1:-75467420 | None:intergenic |
| CCATGATGAAGCAACCAATG+AGG | 0.637485 | 3.1:-75467544 | None:intergenic |
| AGACTTGATCGTCGCAACCG+TGG | 0.637658 | 3.1:+75467514 | MS.gene049377:CDS |
| GACGGCGAGGATGTAAGCCA+TGG | 0.639305 | 3.1:-75467303 | None:intergenic |
| GCCGGAATCGAAGCCAACAA+CGG | 0.641962 | 3.1:-75468547 | None:intergenic |
| CGAGGATGTAAGCCATGGTG+AGG | 0.641965 | 3.1:-75467298 | None:intergenic |
| CGTTCCGGCACGGAGTTCGG+TGG | 0.642018 | 3.1:-75467267 | None:intergenic |
| AAAACTCCCACTAAAATCAA+CGG | 0.651104 | 3.1:-75468586 | None:intergenic |
| GGCATAGCCCGGGTTAACAG+GGG | 0.652581 | 3.1:-75467468 | None:intergenic |
| TCCACCTGGAAGTAAACTAA+CGG | 0.660353 | 3.1:-75467942 | None:intergenic |
| TCATTCTTCTCAAGTCAATG+GGG | 0.660879 | 3.1:+75468837 | MS.gene049377:CDS |
| GTTAGAATAAGCTCCTCCGC+CGG | 0.662382 | 3.1:+75467770 | MS.gene049377:CDS |
| GCCGGAATCAGTTAGAATGG+AGG | 0.674641 | 3.1:-75467330 | None:intergenic |
| ATGCCACGTCGATTGTGGTG+GGG | 0.676120 | 3.1:+75468398 | MS.gene049377:CDS |
| CGACCCCACCACAATCGACG+TGG | 0.676358 | 3.1:-75468401 | None:intergenic |
| ATGGATGGGTTTGAACAGAG+AGG | 0.686685 | 3.1:-75467380 | None:intergenic |
| TCCACTTTAGTCACACTCGG+TGG | 0.687536 | 3.1:+75467863 | MS.gene049377:CDS |
| TCCATTCTAACTGATTCCGG+CGG | 0.703938 | 3.1:+75467332 | MS.gene049377:CDS |
| GCTTTGGTAGGAGATAGTGC+CGG | 0.718145 | 3.1:-75467654 | None:intergenic |
| CTCATGAGCTGAATCACCGG+CGG | 0.724265 | 3.1:-75468158 | None:intergenic |
| TCAACGGGGATAAGAGAAGG+GGG | 0.727255 | 3.1:+75468463 | MS.gene049377:CDS |
| ACTCCCACTAAAATCAACGG+TGG | 0.739508 | 3.1:-75468583 | None:intergenic |
| ACTAACGGTTCCGTTAAGGG+CGG | 0.739734 | 3.1:-75467927 | None:intergenic |
| GGAGCCGTGAAAGCCCACGA+CGG | 0.749184 | 3.1:-75467633 | None:intergenic |
| CGTTTATTGAGTCTTCAACG+GGG | 0.769550 | 3.1:+75468449 | MS.gene049377:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATTGTGTTGAATATTT+GGG | + | chr3.1:75468735-75468754 | MS.gene049377:CDS | 20.0% |
| ! | CTTACATTGTGTTGAATATT+TGG | + | chr3.1:75468734-75468753 | MS.gene049377:CDS | 25.0% |
| ! | GAGGAATTATTAGTACTATT+TGG | - | chr3.1:75468817-75468836 | None:intergenic | 25.0% |
| ! | TGTTTAGTAAAAAACGTGAA+AGG | + | chr3.1:75468055-75468074 | MS.gene049377:CDS | 25.0% |
| !! | ACAATATTTTGCGTTTATGT+CGG | + | chr3.1:75468375-75468394 | MS.gene049377:CDS | 25.0% |
| AAAACTCCCACTAAAATCAA+CGG | - | chr3.1:75468589-75468608 | None:intergenic | 30.0% | |
| CTTCAAAACAATCAAGGTAT+CGG | + | chr3.1:75467821-75467840 | MS.gene049377:CDS | 30.0% | |
| TAAGCAATAGAATACGTCAA+AGG | - | chr3.1:75468691-75468710 | None:intergenic | 30.0% | |
| TGACGTATTCTATTGCTTAT+GGG | + | chr3.1:75468692-75468711 | MS.gene049377:CDS | 30.0% | |
| TTCTTACTCATTTCATCAGT+CGG | + | chr3.1:75467710-75467729 | MS.gene049377:CDS | 30.0% | |
| TTGACGTATTCTATTGCTTA+TGG | + | chr3.1:75468691-75468710 | MS.gene049377:CDS | 30.0% | |
| ! | TGTGGTAACATTTTTATACG+TGG | + | chr3.1:75468273-75468292 | MS.gene049377:CDS | 30.0% |
| ! | TGTGTTGAATATTTGGGATT+GGG | + | chr3.1:75468741-75468760 | MS.gene049377:CDS | 30.0% |
| ! | TTCAAAACAATCAAGGTATC+GGG | + | chr3.1:75467822-75467841 | MS.gene049377:CDS | 30.0% |
| ! | TTGTGTTGAATATTTGGGAT+TGG | + | chr3.1:75468740-75468759 | MS.gene049377:CDS | 30.0% |
| !! | AGTTTTAACAGCATAGGAAA+AGG | + | chr3.1:75468235-75468254 | MS.gene049377:CDS | 30.0% |
| !! | GTTTTAACAGCATAGGAAAA+GGG | + | chr3.1:75468236-75468255 | MS.gene049377:CDS | 30.0% |
| !!! | CATAGGAAAAGGGTATTTTT+GGG | + | chr3.1:75468246-75468265 | MS.gene049377:CDS | 30.0% |
| AGCTCATGAGTATTTCAAGA+AGG | + | chr3.1:75468171-75468190 | MS.gene049377:CDS | 35.0% | |
| AGTTGTAGTGCTTTAGCATT+TGG | - | chr3.1:75468898-75468917 | None:intergenic | 35.0% | |
| CGATTATAATAAAGCCCACA+AGG | - | chr3.1:75468030-75468049 | None:intergenic | 35.0% | |
| CTCATTCTTCTCAAGTCAAT+GGG | + | chr3.1:75468836-75468855 | MS.gene049377:CDS | 35.0% | |
| GCAAATTTGCATGAGATATC+AGG | - | chr3.1:75467449-75467468 | None:intergenic | 35.0% | |
| GTTCGTTACAAAAACACCAA+AGG | + | chr3.1:75468789-75468808 | MS.gene049377:CDS | 35.0% | |
| GTTTCGAAACACGAAAGTAA+CGG | + | chr3.1:75468120-75468139 | MS.gene049377:CDS | 35.0% | |
| TAAACTAACGGTTCCGTTAA+GGG | - | chr3.1:75467933-75467952 | None:intergenic | 35.0% | |
| TACGTAGCTAAAACAAGACT+AGG | + | chr3.1:75467206-75467225 | MS.gene049377:CDS | 35.0% | |
| TCATGAGTATTTCAAGAAGG+TGG | + | chr3.1:75468174-75468193 | MS.gene049377:CDS | 35.0% | |
| TCATTCTTCTCAAGTCAATG+GGG | + | chr3.1:75468837-75468856 | MS.gene049377:CDS | 35.0% | |
| TCTATTGCTTATGGGCTTAT+TGG | + | chr3.1:75468700-75468719 | MS.gene049377:CDS | 35.0% | |
| TCTCATTCTTCTCAAGTCAA+TGG | + | chr3.1:75468835-75468854 | MS.gene049377:CDS | 35.0% | |
| ! | ATTTTGTCTCCGTGATAGAA+TGG | + | chr3.1:75467982-75468001 | MS.gene049377:CDS | 35.0% |
| ! | CTCAAAATTTCCGTTTTCGT+CGG | - | chr3.1:75468353-75468372 | None:intergenic | 35.0% |
| ! | GACGAAAACGGAAATTTTGA+GGG | + | chr3.1:75468352-75468371 | MS.gene049377:CDS | 35.0% |
| ! | GTGTTGAATATTTGGGATTG+GGG | + | chr3.1:75468742-75468761 | MS.gene049377:CDS | 35.0% |
| ! | TGTTGAATATTTGGGATTGG+GGG | + | chr3.1:75468743-75468762 | MS.gene049377:CDS | 35.0% |
| ! | TTAGTACTATTTGGCTCCTT+TGG | - | chr3.1:75468808-75468827 | None:intergenic | 35.0% |
| ! | TTTTCGTAACAGCAATTTCG+TGG | + | chr3.1:75468098-75468117 | MS.gene049377:CDS | 35.0% |
| !! | ATTGACTTGAGAAGAATGAG+AGG | - | chr3.1:75468836-75468855 | None:intergenic | 35.0% |
| !! | GCGTTAAGTTTTAACAGCAT+AGG | + | chr3.1:75468229-75468248 | MS.gene049377:CDS | 35.0% |
| !!! | AGTTTTGATGATGAGATCAG+TGG | + | chr3.1:75468603-75468622 | MS.gene049377:CDS | 35.0% |
| !!! | GCATAGGAAAAGGGTATTTT+TGG | + | chr3.1:75468245-75468264 | MS.gene049377:CDS | 35.0% |
| !!! | GTTGTTTTTTACACCGTTGT+TGG | + | chr3.1:75468534-75468553 | MS.gene049377:CDS | 35.0% |
| !!! | TAGTCTTGTTTTAGCTACGT+AGG | - | chr3.1:75467207-75467226 | None:intergenic | 35.0% |
| AGTATCATTGTCACAAACGC+AGG | - | chr3.1:75468664-75468683 | None:intergenic | 40.0% | |
| ATACTCATGAGCTGAATCAC+CGG | - | chr3.1:75468164-75468183 | None:intergenic | 40.0% | |
| ATCGGGCTTCAAAACAATCA+AGG | + | chr3.1:75467815-75467834 | MS.gene049377:CDS | 40.0% | |
| ATCTCTACCTCAAACTGTAC+CGG | + | chr3.1:75467401-75467420 | MS.gene049377:CDS | 40.0% | |
| ATTGCTTATGGGCTTATTGG+TGG | + | chr3.1:75468703-75468722 | MS.gene049377:CDS | 40.0% | |
| CATGATGAAGCAACCAATGA+GGG | - | chr3.1:75467546-75467565 | None:intergenic | 40.0% | |
| CGTTTATTGAGTCTTCAACG+GGG | + | chr3.1:75468449-75468468 | MS.gene049377:CDS | 40.0% | |
| GAACGTTGTATTCTATGGCA+AGG | + | chr3.1:75468314-75468333 | MS.gene049377:CDS | 40.0% | |
| GACAGGAACGTTGTATTCTA+TGG | + | chr3.1:75468309-75468328 | MS.gene049377:CDS | 40.0% | |
| GCGTTTATTGAGTCTTCAAC+GGG | + | chr3.1:75468448-75468467 | MS.gene049377:CDS | 40.0% | |
| GGCGTTTATTGAGTCTTCAA+CGG | + | chr3.1:75468447-75468466 | MS.gene049377:CDS | 40.0% | |
| GTAAACTAACGGTTCCGTTA+AGG | - | chr3.1:75467934-75467953 | None:intergenic | 40.0% | |
| GTCAAACTGATCAACCTCAA+AGG | + | chr3.1:75467129-75467148 | MS.gene049377:CDS | 40.0% | |
| GTGAAAGGAGCAATGATCTA+CGG | + | chr3.1:75468070-75468089 | MS.gene049377:CDS | 40.0% | |
| GTTAGGAACTTCACCTGTAA+CGG | + | chr3.1:75468426-75468445 | MS.gene049377:CDS | 40.0% | |
| TAGTTTACTTCCAGGTGGAA+CGG | + | chr3.1:75467946-75467965 | MS.gene049377:CDS | 40.0% | |
| TCATCCACTTTAGTCACACT+CGG | + | chr3.1:75467860-75467879 | MS.gene049377:CDS | 40.0% | |
| TCCACCTGGAAGTAAACTAA+CGG | - | chr3.1:75467945-75467964 | None:intergenic | 40.0% | |
| TTGCGACGATCAAGTCTTTA+CGG | - | chr3.1:75467511-75467530 | None:intergenic | 40.0% | |
| TTGCTTATGGGCTTATTGGT+GGG | + | chr3.1:75468704-75468723 | MS.gene049377:CDS | 40.0% | |
| TTGGGCTTTCCATTCTATCA+CGG | - | chr3.1:75467994-75468013 | None:intergenic | 40.0% | |
| ! | AGTTTGAGGTAGAGATGGAT+GGG | - | chr3.1:75467397-75467416 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGAGATTGATT+GGG | + | chr3.1:75468618-75468637 | MS.gene049377:CDS | 40.0% |
| ! | CGACGAAAACGGAAATTTTG+AGG | + | chr3.1:75468351-75468370 | MS.gene049377:CDS | 40.0% |
| ! | CTCATTGGTTGCTTCATCAT+GGG | + | chr3.1:75467545-75467564 | MS.gene049377:CDS | 40.0% |
| ! | GCTGAATGAGATGAAGTGTT+GGG | - | chr3.1:75467427-75467446 | None:intergenic | 40.0% |
| ! | GCTTTTGCTAATCTCCCTTT+AGG | + | chr3.1:75467569-75467588 | MS.gene049377:CDS | 40.0% |
| !! | ACGGGTTTTATCAAGACAAG+CGG | - | chr3.1:75467492-75467511 | None:intergenic | 40.0% |
| !! | ATTGGGGGTTTGAGATTTTG+GGG | + | chr3.1:75468758-75468777 | MS.gene049377:CDS | 40.0% |
| !! | GATTGGGGGTTTGAGATTTT+GGG | + | chr3.1:75468757-75468776 | MS.gene049377:CDS | 40.0% |
| !! | TTTGATGATGAGATCAGTGG+TGG | + | chr3.1:75468606-75468625 | MS.gene049377:CDS | 40.0% |
| !!! | TTGAGATTTTGGGGCACTAT+GGG | + | chr3.1:75468767-75468786 | MS.gene049377:CDS | 40.0% |
| !!! | TTTGAGATTTTGGGGCACTA+TGG | + | chr3.1:75468766-75468785 | MS.gene049377:CDS | 40.0% |
| AAAACTTAACGCACCTGCTG+TGG | - | chr3.1:75468221-75468240 | None:intergenic | 45.0% | |
| AAATTTGCCCCTGTTAACCC+GGG | + | chr3.1:75467461-75467480 | MS.gene049377:CDS | 45.0% | |
| ACTCCCACTAAAATCAACGG+TGG | - | chr3.1:75468586-75468605 | None:intergenic | 45.0% | |
| ATAAGAGAAGGGGGAAGAAC+GGG | + | chr3.1:75468472-75468491 | MS.gene049377:CDS | 45.0% | |
| CAAATTTGCCCCTGTTAACC+CGG | + | chr3.1:75467460-75467479 | MS.gene049377:CDS | 45.0% | |
| CACACGATAAAATCCACAGC+AGG | + | chr3.1:75468205-75468224 | MS.gene049377:CDS | 45.0% | |
| CCATGATGAAGCAACCAATG+AGG | - | chr3.1:75467547-75467566 | None:intergenic | 45.0% | |
| CTTCAACGGGGATAAGAGAA+GGG | + | chr3.1:75468461-75468480 | MS.gene049377:CDS | 45.0% | |
| GACTCAATAAACGCCGTTAC+AGG | - | chr3.1:75468442-75468461 | None:intergenic | 45.0% | |
| GATAAGAGAAGGGGGAAGAA+CGG | + | chr3.1:75468471-75468490 | MS.gene049377:CDS | 45.0% | |
| GGCTGAATGAGATGAAGTGT+TGG | - | chr3.1:75467428-75467447 | None:intergenic | 45.0% | |
| GGTGAAAGTGGAGTTACGTT+GGG | - | chr3.1:75467249-75467268 | None:intergenic | 45.0% | |
| TACTTTGCTTACACCGTCGT+GGG | + | chr3.1:75467620-75467639 | MS.gene049377:CDS | 45.0% | |
| TATGGGCTTATTGGTGGGAT+TGG | + | chr3.1:75468709-75468728 | MS.gene049377:CDS | 45.0% | |
| TATTCTATGGCAAGGTTCGC+AGG | + | chr3.1:75468322-75468341 | MS.gene049377:CDS | 45.0% | |
| TCTTCAACGGGGATAAGAGA+AGG | + | chr3.1:75468460-75468479 | MS.gene049377:CDS | 45.0% | |
| TGAACAGAGAGGGACACAAT+CGG | - | chr3.1:75467372-75467391 | None:intergenic | 45.0% | |
| TGCGACGATCAAGTCTTTAC+GGG | - | chr3.1:75467510-75467529 | None:intergenic | 45.0% | |
| TGGTGAAAGTGGAGTTACGT+TGG | - | chr3.1:75467250-75467269 | None:intergenic | 45.0% | |
| TTACTTTGCTTACACCGTCG+TGG | + | chr3.1:75467619-75467638 | MS.gene049377:CDS | 45.0% | |
| TTCAACGGGGATAAGAGAAG+GGG | + | chr3.1:75468462-75468481 | MS.gene049377:CDS | 45.0% | |
| TTCTTCTCAAGTCAATGGGG+TGG | + | chr3.1:75468840-75468859 | MS.gene049377:CDS | 45.0% | |
| ! | ACCGTTAGTTTACTTCCAGG+TGG | + | chr3.1:75467941-75467960 | MS.gene049377:CDS | 45.0% |
| ! | ATGGATGGGTTTGAACAGAG+AGG | - | chr3.1:75467383-75467402 | None:intergenic | 45.0% |
| ! | CAGTTTGAGGTAGAGATGGA+TGG | - | chr3.1:75467398-75467417 | None:intergenic | 45.0% |
| ! | CCTCATTGGTTGCTTCATCA+TGG | + | chr3.1:75467544-75467563 | MS.gene049377:CDS | 45.0% |
| ! | GATCAGTGGTGGAGATTGAT+TGG | + | chr3.1:75468617-75468636 | MS.gene049377:CDS | 45.0% |
| ! | GCCTCCATTCTAACTGATTC+CGG | + | chr3.1:75467329-75467348 | MS.gene049377:CDS | 45.0% |
| ! | GGAACCGTTAGTTTACTTCC+AGG | + | chr3.1:75467938-75467957 | MS.gene049377:CDS | 45.0% |
| ! | GGTACAGTTTGAGGTAGAGA+TGG | - | chr3.1:75467402-75467421 | None:intergenic | 45.0% |
| ! | TCCATTCTAACTGATTCCGG+CGG | + | chr3.1:75467332-75467351 | MS.gene049377:CDS | 45.0% |
| ! | TGGATGGGTTTGAACAGAGA+GGG | - | chr3.1:75467382-75467401 | None:intergenic | 45.0% |
| !! | AATGAGATGAAGTGTTGGGC+CGG | - | chr3.1:75467423-75467442 | None:intergenic | 45.0% |
| !! | AGTTAGAATGGAGGCGTTGA+CGG | - | chr3.1:75467324-75467343 | None:intergenic | 45.0% |
| !! | GAGCTTATTCTAACGGGCTT+TGG | - | chr3.1:75467764-75467783 | None:intergenic | 45.0% |
| !! | GGATTGGGGGTTTGAGATTT+TGG | + | chr3.1:75468756-75468775 | MS.gene049377:CDS | 45.0% |
| !! | GGCTTTTTCTCGCTTTCATC+GGG | + | chr3.1:75467798-75467817 | MS.gene049377:CDS | 45.0% |
| !! | GGGCTTTTTCTCGCTTTCAT+CGG | + | chr3.1:75467797-75467816 | MS.gene049377:CDS | 45.0% |
| !! | TAGGTGTTGAAGCGAGAGAT+GGG | - | chr3.1:75467188-75467207 | None:intergenic | 45.0% |
| !!! | AGGGTATTTTTGGGAAGCTG+TGG | + | chr3.1:75468255-75468274 | MS.gene049377:CDS | 45.0% |
| !!! | GGACCACCGTTGATTTTAGT+GGG | + | chr3.1:75468580-75468599 | MS.gene049377:CDS | 45.0% |
| !!! | GGTGGCGGGTTATTTTTTCA+TGG | + | chr3.1:75468510-75468529 | MS.gene049377:CDS | 45.0% |
| !!! | TGGACCACCGTTGATTTTAG+TGG | + | chr3.1:75468579-75468598 | MS.gene049377:CDS | 45.0% |
| AAAGAAGCCCGTGATGAGCT+TGG | - | chr3.1:75467893-75467912 | None:intergenic | 50.0% | |
| AAGAAGCCCGTGATGAGCTT+GGG | - | chr3.1:75467892-75467911 | None:intergenic | 50.0% | |
| ACCAATGAGGGAAGAAGCCA+CGG | - | chr3.1:75467534-75467553 | None:intergenic | 50.0% | |
| ACCACCGAGTGTGACTAAAG+TGG | - | chr3.1:75467867-75467886 | None:intergenic | 50.0% | |
| ACTAACGGTTCCGTTAAGGG+CGG | - | chr3.1:75467930-75467949 | None:intergenic | 50.0% | |
| AGCGAGAAAAAGCCCGATAC+CGG | - | chr3.1:75467792-75467811 | None:intergenic | 50.0% | |
| ATACCTGGAGCAAGGCCTAA+AGG | - | chr3.1:75467587-75467606 | None:intergenic | 50.0% | |
| CCGGTTATAACCGCCCTTAA+CGG | + | chr3.1:75467917-75467936 | MS.gene049377:CDS | 50.0% | |
| CCGTTAAGGGCGGTTATAAC+CGG | - | chr3.1:75467920-75467939 | None:intergenic | 50.0% | |
| GAAAGCCCAACACTCTGGTT+GGG | + | chr3.1:75468004-75468023 | MS.gene049377:CDS | 50.0% | |
| GAATGGAAAGCCCAACACTC+TGG | + | chr3.1:75467999-75468018 | MS.gene049377:CDS | 50.0% | |
| GCAGGTTTCACCGACGAAAA+CGG | + | chr3.1:75468340-75468359 | MS.gene049377:CDS | 50.0% | |
| GCCGGAATCAGTTAGAATGG+AGG | - | chr3.1:75467333-75467352 | None:intergenic | 50.0% | |
| GCGGAGGAGCTTATTCTAAC+GGG | - | chr3.1:75467770-75467789 | None:intergenic | 50.0% | |
| GCTTTGGTAGGAGATAGTGC+CGG | - | chr3.1:75467657-75467676 | None:intergenic | 50.0% | |
| GGCGGAGGAGCTTATTCTAA+CGG | - | chr3.1:75467771-75467790 | None:intergenic | 50.0% | |
| GTTAGAATAAGCTCCTCCGC+CGG | + | chr3.1:75467770-75467789 | MS.gene049377:CDS | 50.0% | |
| TAAGAGAAGGGGGAAGAACG+GGG | + | chr3.1:75468473-75468492 | MS.gene049377:CDS | 50.0% | |
| TAAGCGTTTGAGCCCATACC+TGG | - | chr3.1:75467602-75467621 | None:intergenic | 50.0% | |
| TACCTGGAGCAAGGCCTAAA+GGG | - | chr3.1:75467586-75467605 | None:intergenic | 50.0% | |
| TCAACGGGGATAAGAGAAGG+GGG | + | chr3.1:75468463-75468482 | MS.gene049377:CDS | 50.0% | |
| TCCACTTTAGTCACACTCGG+TGG | + | chr3.1:75467863-75467882 | MS.gene049377:CDS | 50.0% | |
| TCCGCCGGAATCAGTTAGAA+TGG | - | chr3.1:75467336-75467355 | None:intergenic | 50.0% | |
| TTAGGCCTTGCTCCAGGTAT+GGG | + | chr3.1:75467587-75467606 | MS.gene049377:CDS | 50.0% | |
| TTTAGGCCTTGCTCCAGGTA+TGG | + | chr3.1:75467586-75467605 | MS.gene049377:CDS | 50.0% | |
| ! | AACGGCTACTTTCCTCACCA+TGG | + | chr3.1:75467286-75467305 | MS.gene049377:CDS | 50.0% |
| ! | ATTGTGGTGGGGTCGTTGTT+AGG | + | chr3.1:75468409-75468428 | MS.gene049377:CDS | 50.0% |
| ! | CTCGCAGCAGTTTTCATCGA+AGG | + | chr3.1:75467680-75467699 | MS.gene049377:CDS | 50.0% |
| !! | AATCAAGGTATCGGGCTCGT+TGG | + | chr3.1:75467830-75467849 | MS.gene049377:CDS | 50.0% |
| !! | ACCGTTGTTGGCTTCGATTC+CGG | + | chr3.1:75468546-75468565 | MS.gene049377:CDS | 50.0% |
| !! | ATCAAGGTATCGGGCTCGTT+GGG | + | chr3.1:75467831-75467850 | MS.gene049377:CDS | 50.0% |
| !! | GTAGGTGTTGAAGCGAGAGA+TGG | - | chr3.1:75467189-75467208 | None:intergenic | 50.0% |
| AAACTGCTGCGAGTGCGCTT+TGG | - | chr3.1:75467673-75467692 | None:intergenic | 55.0% | |
| AACACTCTGGTTGGGCCTTG+TGG | + | chr3.1:75468012-75468031 | MS.gene049377:CDS | 55.0% | |
| ACAAGGCCCAACCAGAGTGT+TGG | - | chr3.1:75468013-75468032 | None:intergenic | 55.0% | |
| ACCGTGGCTTCTTCCCTCAT+TGG | + | chr3.1:75467530-75467549 | MS.gene049377:CDS | 55.0% | |
| AGACTTGATCGTCGCAACCG+TGG | + | chr3.1:75467514-75467533 | MS.gene049377:CDS | 55.0% | |
| AGGGGGAAGAACGGGGATAA+CGG | + | chr3.1:75468480-75468499 | MS.gene049377:CDS | 55.0% | |
| ATAAGCTCCTCCGCCGGTAT+CGG | + | chr3.1:75467776-75467795 | MS.gene049377:CDS | 55.0% | |
| ATCACGGGCTTCTTTAGCGC+CGG | + | chr3.1:75467898-75467917 | MS.gene049377:CDS | 55.0% | |
| CGAGGATGTAAGCCATGGTG+AGG | - | chr3.1:75467301-75467320 | None:intergenic | 55.0% | |
| CTCATGAGCTGAATCACCGG+CGG | - | chr3.1:75468161-75468180 | None:intergenic | 55.0% | |
| CTTCCAGGTGGAACGGTTTC+TGG | + | chr3.1:75467953-75467972 | MS.gene049377:CDS | 55.0% | |
| GAGAAAAAGCCCGATACCGG+CGG | - | chr3.1:75467789-75467808 | None:intergenic | 55.0% | |
| GCCGGAATCGAAGCCAACAA+CGG | - | chr3.1:75468550-75468569 | None:intergenic | 55.0% | |
| GGAAACAGAGCATGTTCCGC+CGG | - | chr3.1:75467351-75467370 | None:intergenic | 55.0% | |
| GGAAAGCCCAACACTCTGGT+TGG | + | chr3.1:75468003-75468022 | MS.gene049377:CDS | 55.0% | |
| GGTGAGGAAAGTAGCCGTTC+CGG | - | chr3.1:75467285-75467304 | None:intergenic | 55.0% | |
| GTGGACATTCTCGACACGAC+AGG | + | chr3.1:75468292-75468311 | MS.gene049377:CDS | 55.0% | |
| GTGGTTGCCCAAGCTCATCA+CGG | + | chr3.1:75467882-75467901 | MS.gene049377:CDS | 55.0% | |
| TACACCGTCGTGGGCTTTCA+CGG | + | chr3.1:75467629-75467648 | MS.gene049377:CDS | 55.0% | |
| TCAAGACAAGCGGCATAGCC+CGG | - | chr3.1:75467482-75467501 | None:intergenic | 55.0% | |
| TCACCAGAAACCGTTCCACC+TGG | - | chr3.1:75467959-75467978 | None:intergenic | 55.0% | |
| TGGTTGCCCAAGCTCATCAC+GGG | + | chr3.1:75467883-75467902 | MS.gene049377:CDS | 55.0% | |
| TGTTGGGCCGGTACAGTTTG+AGG | - | chr3.1:75467411-75467430 | None:intergenic | 55.0% | |
| TTGAGCCCATACCTGGAGCA+AGG | - | chr3.1:75467595-75467614 | None:intergenic | 55.0% | |
| ! | AACGGGGATAACGGCGTTGA+CGG | + | chr3.1:75468489-75468508 | MS.gene049377:CDS | 55.0% |
| ! | ACACTCTGGTTGGGCCTTGT+GGG | + | chr3.1:75468013-75468032 | MS.gene049377:CDS | 55.0% |
| ! | ACGGAGTTCGGTGGTGAAAG+TGG | - | chr3.1:75467261-75467280 | None:intergenic | 55.0% |
| ! | AGATGGGCTTTGTGTGGGCT+TGG | - | chr3.1:75467172-75467191 | None:intergenic | 55.0% |
| ! | AGCGAGAGATGGGCTTTGTG+TGG | - | chr3.1:75467178-75467197 | None:intergenic | 55.0% |
| ! | ATGCCACGTCGATTGTGGTG+GGG | + | chr3.1:75468398-75468417 | MS.gene049377:CDS | 55.0% |
| ! | CAAGGCCCAACCAGAGTGTT+GGG | - | chr3.1:75468012-75468031 | None:intergenic | 55.0% |
| ! | GATGCCACGTCGATTGTGGT+GGG | + | chr3.1:75468397-75468416 | MS.gene049377:CDS | 55.0% |
| ! | GCGAGAGATGGGCTTTGTGT+GGG | - | chr3.1:75467177-75467196 | None:intergenic | 55.0% |
| ! | GTTGGCTTCGATTCCGGCTT+GGG | + | chr3.1:75468552-75468571 | MS.gene049377:CDS | 55.0% |
| !! | TGTTGGCTTCGATTCCGGCT+TGG | + | chr3.1:75468551-75468570 | MS.gene049377:CDS | 55.0% |
| AAAAAGCCCGATACCGGCGG+AGG | - | chr3.1:75467786-75467805 | None:intergenic | 60.0% | |
| ATGAGCTGAATCACCGGCGG+CGG | - | chr3.1:75468158-75468177 | None:intergenic | 60.0% | |
| CAAGACAAGCGGCATAGCCC+GGG | - | chr3.1:75467481-75467500 | None:intergenic | 60.0% | |
| CGGCATAGCCCGGGTTAACA+GGG | - | chr3.1:75467472-75467491 | None:intergenic | 60.0% | |
| CTCCCTTTAGGCCTTGCTCC+AGG | + | chr3.1:75467581-75467600 | MS.gene049377:CDS | 60.0% | |
| GACGGCGAGGATGTAAGCCA+TGG | - | chr3.1:75467306-75467325 | None:intergenic | 60.0% | |
| GGAAAGTAGCCGTTCCGGCA+CGG | - | chr3.1:75467280-75467299 | None:intergenic | 60.0% | |
| GGCATAGCCCGGGTTAACAG+GGG | - | chr3.1:75467471-75467490 | None:intergenic | 60.0% | |
| TAAGCTCCTCCGCCGGTATC+GGG | + | chr3.1:75467777-75467796 | MS.gene049377:CDS | 60.0% | |
| TGCTGCGAGTGCGCTTTGGT+AGG | - | chr3.1:75467669-75467688 | None:intergenic | 60.0% | |
| TTCACCACCGAACTCCGTGC+CGG | + | chr3.1:75467263-75467282 | MS.gene049377:CDS | 60.0% | |
| ! | GGATGCCACGTCGATTGTGG+TGG | + | chr3.1:75468396-75468415 | MS.gene049377:CDS | 60.0% |
| ! | GGGCTTTGTGTGGGCTTGGT+GGG | - | chr3.1:75467168-75467187 | None:intergenic | 60.0% |
| ! | GTCGGATGCCACGTCGATTG+TGG | + | chr3.1:75468393-75468412 | MS.gene049377:CDS | 60.0% |
| ! | TGGGCTTTGTGTGGGCTTGG+TGG | - | chr3.1:75467169-75467188 | None:intergenic | 60.0% |
| !! | ATAACGGCGTTGACGGTGGC+GGG | + | chr3.1:75468496-75468515 | MS.gene049377:CDS | 60.0% |
| !! | GATAACGGCGTTGACGGTGG+CGG | + | chr3.1:75468495-75468514 | MS.gene049377:CDS | 60.0% |
| !! | TCGATTCCGGCTTGGGCTGT+TGG | + | chr3.1:75468559-75468578 | MS.gene049377:CDS | 60.0% |
| !! | TTTGTGTGGGCTTGGTGGGC+TGG | - | chr3.1:75467164-75467183 | None:intergenic | 60.0% |
| AGCCGTTCCGGCACGGAGTT+CGG | - | chr3.1:75467273-75467292 | None:intergenic | 65.0% | |
| CACCGAACTCCGTGCCGGAA+CGG | + | chr3.1:75467268-75467287 | MS.gene049377:CDS | 65.0% | |
| CGACCCCACCACAATCGACG+TGG | - | chr3.1:75468404-75468423 | None:intergenic | 65.0% | |
| GAATCACCGGCGGCGGTGTT+AGG | - | chr3.1:75468151-75468170 | None:intergenic | 65.0% | |
| GCGGCATAGCCCGGGTTAAC+AGG | - | chr3.1:75467473-75467492 | None:intergenic | 65.0% | |
| GCGTTTCCTAACACCGCCGC+CGG | + | chr3.1:75468142-75468161 | MS.gene049377:CDS | 65.0% | |
| GCTGGAAGTGGGGGCCTTTG+AGG | - | chr3.1:75467146-75467165 | None:intergenic | 65.0% | |
| GGAGCCGTGAAAGCCCACGA+CGG | - | chr3.1:75467636-75467655 | None:intergenic | 65.0% | |
| GGTGGTCCAACAGCCCAAGC+CGG | - | chr3.1:75468568-75468587 | None:intergenic | 65.0% | |
| GTCGTGGGCTTTCACGGCTC+CGG | + | chr3.1:75467635-75467654 | MS.gene049377:CDS | 65.0% | |
| !! | GAATGGAGGCGTTGACGGCG+AGG | - | chr3.1:75467319-75467338 | None:intergenic | 65.0% |
| !! | GCTTGGTGGGCTGGAAGTGG+GGG | - | chr3.1:75467155-75467174 | None:intergenic | 65.0% |
| !! | GGCTTGGTGGGCTGGAAGTG+GGG | - | chr3.1:75467156-75467175 | None:intergenic | 65.0% |
| !! | GGGCTTGGTGGGCTGGAAGT+GGG | - | chr3.1:75467157-75467176 | None:intergenic | 65.0% |
| !! | GGGGATAACGGCGTTGACGG+TGG | + | chr3.1:75468492-75468511 | MS.gene049377:CDS | 65.0% |
| !! | TGGGCTTGGTGGGCTGGAAG+TGG | - | chr3.1:75467158-75467177 | None:intergenic | 65.0% |
| CGTTCCGGCACGGAGTTCGG+TGG | - | chr3.1:75467270-75467289 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75467122 | 75468930 | 75467122 | ID=MS.gene049377 |
| chr3.1 | mRNA | 75467122 | 75468930 | 75467122 | ID=MS.gene049377.t1;Parent=MS.gene049377 |
| chr3.1 | exon | 75467122 | 75468930 | 75467122 | ID=MS.gene049377.t1.exon1;Parent=MS.gene049377.t1 |
| chr3.1 | CDS | 75467122 | 75468930 | 75467122 | ID=cds.MS.gene049377.t1;Parent=MS.gene049377.t1 |
| Gene Sequence |
| Protein sequence |
