AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065523

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065523.t1 MTR_5g093090 96.269 268 10 0 1 268 25 292 0.0 542
MS.gene065523.t1 MTR_5g093090 95.896 268 11 0 1 268 25 292 0.0 539
MS.gene065523.t1 MTR_3g052490 70.566 265 78 0 2 266 30 294 1.77e-138 394
MS.gene065523.t1 MTR_3g052480 69.057 265 81 1 3 266 32 296 8.44e-136 388
MS.gene065523.t1 MTR_5g093090 96.175 183 7 0 1 183 25 207 3.45e-129 365
MS.gene065523.t1 MTR_3g052580 64.906 265 92 1 2 266 26 289 6.60e-124 358
MS.gene065523.t1 MTR_3g052580 64.906 265 92 1 2 266 25 288 1.88e-123 358
MS.gene065523.t1 MTR_4g122200 35.662 272 159 5 2 266 33 295 1.02e-54 181
MS.gene065523.t1 MTR_4g035353 37.818 275 155 6 2 269 29 294 5.91e-54 179
MS.gene065523.t1 MTR_2g033920 35.662 272 159 5 2 266 33 295 2.26e-52 173
MS.gene065523.t1 MTR_2g033920 35.662 272 159 5 2 266 33 295 6.47e-52 173
MS.gene065523.t1 MTR_2g033930 33.457 269 165 5 3 266 31 290 8.69e-52 173
MS.gene065523.t1 MTR_5g078210 34.586 266 165 3 4 266 25 284 3.56e-51 170
MS.gene065523.t1 MTR_5g078210 34.074 270 169 3 4 270 25 288 3.64e-51 171
MS.gene065523.t1 MTR_4g056160 36.496 274 160 6 1 268 24 289 2.05e-49 166
MS.gene065523.t1 MTR_3g005650 37.037 270 157 5 2 268 28 287 2.84e-49 166
MS.gene065523.t1 MTR_3g021460 38.686 274 153 9 1 268 28 292 6.21e-49 165
MS.gene065523.t1 MTR_3g024510 37.818 275 156 8 2 270 36 301 1.51e-47 162
MS.gene065523.t1 MTR_2g461580 37.226 274 157 9 1 268 28 292 1.98e-47 161
MS.gene065523.t1 MTR_8g074570 34.191 272 163 6 3 267 37 299 2.04e-47 162
MS.gene065523.t1 MTR_8g074560 34.066 273 162 7 2 263 29 294 3.38e-47 161
MS.gene065523.t1 MTR_1g024890 36.296 270 156 6 4 266 32 292 1.99e-46 159
MS.gene065523.t1 MTR_3g098270 35.612 278 158 7 4 270 34 301 1.69e-45 157
MS.gene065523.t1 MTR_0565s0010 36.957 276 156 9 2 269 30 295 1.84e-45 157
MS.gene065523.t1 MTR_1g079540 34.432 273 165 6 4 270 31 295 2.28e-45 156
MS.gene065523.t1 MTR_4g108690 33.835 266 164 4 6 266 29 287 2.82e-45 156
MS.gene065523.t1 MTR_8g087890 34.783 276 161 7 2 269 29 293 4.71e-45 155
MS.gene065523.t1 MTR_8g079050 35.145 276 161 7 4 268 37 305 5.46e-45 155
MS.gene065523.t1 MTR_0009s0250 37.037 270 151 8 2 267 31 285 1.09e-44 154
MS.gene065523.t1 MTR_7g116570 33.582 268 166 5 4 266 34 294 1.65e-44 154
MS.gene065523.t1 MTR_3g082830 33.212 274 170 6 2 270 36 301 2.03e-44 154
MS.gene065523.t1 MTR_1g069175 35.424 271 159 7 4 266 33 295 3.70e-44 153
MS.gene065523.t1 MTR_3g435540 32.576 264 170 3 6 266 25 283 5.28e-44 153
MS.gene065523.t1 MTR_8g074580 36.059 269 163 5 3 267 43 306 5.01e-43 151
MS.gene065523.t1 MTR_2g084585 35.424 271 162 6 1 266 27 289 5.21e-43 150
MS.gene065523.t1 MTR_4g056280 34.559 272 165 6 1 267 27 290 1.06e-42 149
MS.gene065523.t1 MTR_5g074270 35.094 265 158 6 4 262 33 289 1.46e-42 149
MS.gene065523.t1 MTR_2g044100 33.086 269 163 5 4 266 43 300 6.46e-42 148
MS.gene065523.t1 MTR_8g014910 33.455 275 170 6 1 270 29 295 7.05e-42 147
MS.gene065523.t1 MTR_7g116510 31.970 269 170 4 4 266 25 286 1.29e-41 146
MS.gene065523.t1 MTR_5g084770 33.824 272 166 6 2 267 26 289 1.96e-41 145
MS.gene065523.t1 MTR_2g100620 32.727 275 172 6 1 270 28 294 5.59e-41 144
MS.gene065523.t1 MTR_5g084790 33.577 274 169 6 2 270 30 295 1.34e-40 144
MS.gene065523.t1 MTR_2g015080 34.173 278 164 7 2 266 36 307 5.94e-40 142
MS.gene065523.t1 MTR_7g116520 32.342 269 168 5 4 266 34 294 7.33e-40 142
MS.gene065523.t1 MTR_7g008060 32.836 268 155 6 4 266 33 280 1.79e-39 140
MS.gene065523.t1 MTR_5g009100 31.852 270 172 5 6 270 48 310 2.29e-39 141
MS.gene065523.t1 MTR_7g116500 32.353 272 164 6 4 266 33 293 3.82e-39 140
MS.gene065523.t1 MTR_6g021530 32.721 272 169 7 2 266 26 290 5.37e-39 140
MS.gene065523.t1 MTR_8g075230 33.455 275 160 7 2 266 34 295 5.52e-39 139
MS.gene065523.t1 MTR_4g087985 33.696 276 162 7 4 266 36 303 6.35e-39 139
MS.gene065523.t1 MTR_8g087870 33.740 246 146 7 2 240 27 262 8.90e-39 139
MS.gene065523.t1 MTR_1g079530 32.941 255 159 5 4 253 29 276 1.22e-38 139
MS.gene065523.t1 MTR_5g084750 32.222 270 170 6 2 266 28 289 1.36e-38 138
MS.gene065523.t1 MTR_8g031420 34.559 272 157 7 4 270 35 290 2.95e-38 137
MS.gene065523.t1 MTR_8g031390 34.201 269 155 7 4 267 37 288 5.26e-38 136
MS.gene065523.t1 MTR_3g464730 32.841 271 168 7 2 266 26 288 7.14e-38 136
MS.gene065523.t1 MTR_8g031390 34.201 269 155 7 4 267 37 288 1.55e-37 136
MS.gene065523.t1 MTR_4g019880 32.721 272 165 7 4 266 32 294 6.35e-37 134
MS.gene065523.t1 MTR_5g022630 32.364 275 173 6 2 270 41 308 7.40e-37 134
MS.gene065523.t1 MTR_8g031430 34.944 269 154 8 4 267 37 289 1.07e-36 134
MS.gene065523.t1 MTR_5g022640 32.000 275 173 7 2 270 41 307 2.42e-36 132
MS.gene065523.t1 MTR_3g023220 35.833 240 137 8 2 236 31 258 9.16e-36 131
MS.gene065523.t1 MTR_2g017965 31.655 278 167 9 2 270 31 294 2.93e-35 130
MS.gene065523.t1 MTR_8g022810 30.741 270 169 7 4 267 41 298 1.05e-34 129
MS.gene065523.t1 MTR_2g017955 33.333 246 147 8 2 240 31 266 5.31e-34 127
MS.gene065523.t1 MTR_3g005660 32.258 279 168 9 2 269 34 302 6.85e-34 126
MS.gene065523.t1 MTR_2g017925 34.146 246 145 7 2 240 31 266 1.06e-33 125
MS.gene065523.t1 MTR_8g022790 31.868 273 169 7 4 270 37 298 2.51e-33 124
MS.gene065523.t1 MTR_1g025760 34.909 275 157 11 2 266 78 340 5.06e-33 124
MS.gene065523.t1 MTR_8g075200 31.599 269 171 6 3 266 40 300 8.18e-33 124
MS.gene065523.t1 MTR_1g025680 34.066 273 168 5 2 269 32 297 1.25e-32 124
MS.gene065523.t1 MTR_8g031400 32.963 270 158 8 4 267 37 289 3.14e-32 122
MS.gene065523.t1 MTR_2g017875 29.545 264 169 8 2 257 32 286 1.49e-31 120
MS.gene065523.t1 MTR_8g075220 31.387 274 170 8 3 266 39 304 5.03e-31 119
MS.gene065523.t1 MTR_1g025700 30.741 270 174 6 2 266 48 309 8.69e-31 118
MS.gene065523.t1 MTR_1g025780 30.403 273 178 5 2 270 39 303 3.27e-30 116
MS.gene065523.t1 MTR_3g114090 31.387 274 174 6 3 270 35 300 5.01e-30 115
MS.gene065523.t1 MTR_1g079590 38.272 162 93 2 4 165 31 185 7.18e-30 112
MS.gene065523.t1 MTR_5g083040 28.470 281 174 7 2 267 30 298 7.54e-30 115
MS.gene065523.t1 MTR_2g017915 35.294 221 125 7 2 214 31 241 3.90e-29 113
MS.gene065523.t1 MTR_1g025720 30.769 273 176 6 3 270 36 300 2.88e-28 111
MS.gene065523.t1 MTR_8g022810 33.014 209 125 6 4 209 41 237 3.14e-27 107
MS.gene065523.t1 MTR_1g025910 32.576 264 162 7 9 266 41 294 1.88e-26 106
MS.gene065523.t1 MTR_2g018015 33.083 266 147 11 2 259 34 276 2.27e-26 105
MS.gene065523.t1 MTR_4g036375 38.562 153 85 4 1 152 27 171 2.33e-26 102
MS.gene065523.t1 MTR_3g114120 29.032 279 175 7 2 270 45 310 1.22e-24 101
MS.gene065523.t1 MTR_7g033165 30.104 289 157 11 3 266 32 300 2.23e-21 91.7
MS.gene065523.t1 MTR_6g049220 48.454 97 42 3 1 96 27 116 2.78e-21 88.2
MS.gene065523.t1 MTR_7g033165 30.104 289 157 11 3 266 32 300 7.49e-21 91.3
MS.gene065523.t1 MTR_2g087292 49.485 97 43 3 2 98 31 121 1.30e-20 89.0
MS.gene065523.t1 MTR_2g015580 29.123 285 170 13 4 268 47 319 3.09e-19 86.7
MS.gene065523.t1 MTR_7g087190 26.897 290 164 11 3 266 42 309 3.51e-19 86.7
MS.gene065523.t1 MTR_7g116870 26.909 275 177 8 4 267 33 294 6.76e-19 85.5
MS.gene065523.t1 MTR_2g015630 31.541 279 162 12 9 268 36 304 9.53e-19 85.1
MS.gene065523.t1 MTR_1g030275 29.225 284 162 12 3 266 38 302 1.51e-18 84.7
MS.gene065523.t1 MTR_6g007090 27.972 286 167 10 3 268 38 304 4.87e-18 83.2
MS.gene065523.t1 MTR_1g030268 27.562 283 168 13 3 266 39 303 8.70e-18 82.0
MS.gene065523.t1 MTR_0127s0040 30.769 169 104 6 109 267 4 169 1.34e-17 80.1
MS.gene065523.t1 MTR_1g030230 26.298 289 166 10 2 266 30 295 1.73e-17 81.6
MS.gene065523.t1 MTR_1g030268 27.562 283 168 13 3 266 39 303 1.81e-17 81.6
MS.gene065523.t1 MTR_6g007095 27.817 284 166 11 3 266 40 304 2.26e-16 79.0
MS.gene065523.t1 MTR_6g007095 26.141 241 148 8 43 266 404 631 1.35e-13 70.9
MS.gene065523.t1 MTR_2g079090 26.786 280 172 11 4 266 30 293 2.72e-16 78.2
MS.gene065523.t1 MTR_1g030220 26.596 282 170 10 4 266 40 303 3.56e-16 77.8
MS.gene065523.t1 MTR_7g111780 27.113 284 164 12 3 268 34 292 3.92e-16 77.8
MS.gene065523.t1 MTR_2g079080 26.786 280 172 11 4 266 30 293 5.71e-16 77.0
MS.gene065523.t1 MTR_8g028160 24.653 288 177 10 5 267 37 309 4.21e-15 74.7
MS.gene065523.t1 MTR_8g089805 26.829 287 167 12 3 266 39 305 5.60e-15 74.3
MS.gene065523.t1 MTR_0029s0050 26.429 280 173 11 4 266 30 293 6.55e-15 73.9
MS.gene065523.t1 MTR_0029s0100 26.429 280 173 11 4 266 30 293 8.32e-15 73.6
MS.gene065523.t1 MTR_1g082390 25.448 279 177 8 3 266 30 292 1.09e-14 73.6
MS.gene065523.t1 MTR_8g038680 27.682 289 164 11 3 266 27 295 1.10e-14 73.6
MS.gene065523.t1 MTR_3g463960 25.806 279 178 10 4 266 44 309 2.21e-14 72.8
MS.gene065523.t1 MTR_3g463950 25.806 279 178 10 4 266 44 309 2.21e-14 72.8
MS.gene065523.t1 MTR_3g463970 25.806 279 178 10 4 266 44 309 2.21e-14 72.8
MS.gene065523.t1 MTR_3g463940 25.806 279 178 10 4 266 44 309 2.21e-14 72.8
MS.gene065523.t1 MTR_3g463930 25.000 284 181 9 4 266 44 316 8.50e-14 70.9
MS.gene065523.t1 MTR_2g015590 27.241 290 171 11 4 270 31 303 1.04e-13 70.5
MS.gene065523.t1 MTR_6g007100 27.758 281 166 11 3 266 32 292 1.13e-13 70.5
MS.gene065523.t1 MTR_4g104240 28.159 277 171 11 5 267 40 302 1.83e-13 70.1
MS.gene065523.t1 MTR_7g113860 25.979 281 177 8 3 267 28 293 4.08e-13 68.9
MS.gene065523.t1 MTR_3g069780 25.357 280 176 9 4 266 30 293 4.77e-13 68.6
MS.gene065523.t1 MTR_2g015590 27.273 286 168 11 4 266 31 299 5.03e-13 68.6
MS.gene065523.t1 MTR_1g092690 24.904 261 159 10 5 259 52 281 4.16e-12 65.9
MS.gene065523.t1 MTR_1g060500 25.564 266 178 9 5 267 41 289 7.17e-12 65.1
MS.gene065523.t1 MTR_7g113860 25.090 279 180 8 3 266 34 298 9.67e-12 64.7
MS.gene065523.t1 MTR_1g060490 25.468 267 172 10 5 267 38 281 1.06e-11 64.7
MS.gene065523.t1 MTR_2g017925 31.624 117 75 2 126 237 44 160 1.26e-11 63.5
MS.gene065523.t1 MTR_5g062890 52.727 55 26 0 1 55 25 79 1.34e-11 60.1
MS.gene065523.t1 MTR_3g448360 24.373 279 185 9 4 268 29 295 3.11e-11 63.2
MS.gene065523.t1 MTR_1g092740 26.792 265 157 12 5 264 39 271 3.79e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065523.t1 AT5G55050 52.985 268 122 3 2 266 37 303 2.86e-88 267
MS.gene065523.t1 AT5G37690 37.407 270 160 3 4 270 27 290 5.03e-58 189
MS.gene065523.t1 AT5G37690 36.431 269 154 4 5 270 28 282 1.04e-52 175
MS.gene065523.t1 AT5G08460 36.559 279 159 7 1 269 46 316 1.71e-51 173
MS.gene065523.t1 AT3G50400 37.367 281 157 8 2 270 32 305 4.64e-51 171
MS.gene065523.t1 AT5G41890 36.364 275 155 8 6 267 33 300 7.73e-48 163
MS.gene065523.t1 AT1G29660 35.766 274 159 6 2 268 30 293 1.24e-46 160
MS.gene065523.t1 AT1G71250 34.409 279 161 6 2 270 39 305 1.27e-46 160
MS.gene065523.t1 AT2G23540 35.971 278 160 7 4 270 48 318 2.21e-46 159
MS.gene065523.t1 AT5G15720 34.767 279 164 7 1 270 27 296 3.64e-46 158
MS.gene065523.t1 AT5G15720 35.273 275 160 7 1 266 27 292 6.22e-46 156
MS.gene065523.t1 AT3G53100 35.424 271 162 7 1 266 26 288 1.79e-45 156
MS.gene065523.t1 AT1G71691 34.926 272 163 6 1 268 52 313 2.19e-45 157
MS.gene065523.t1 AT1G71691 34.815 270 162 6 1 266 52 311 2.41e-45 155
MS.gene065523.t1 AT1G58430 34.799 273 164 7 1 266 32 297 1.97e-44 154
MS.gene065523.t1 AT1G06990 34.672 274 164 6 1 267 34 299 2.89e-44 153
MS.gene065523.t1 AT1G29670 35.036 274 162 7 2 269 30 293 1.85e-43 151
MS.gene065523.t1 AT1G29670 35.036 274 162 7 2 269 98 361 1.10e-42 151
MS.gene065523.t1 AT2G42990 33.942 274 168 6 2 270 26 291 1.13e-42 149
MS.gene065523.t1 AT2G04570 35.165 273 164 6 2 269 26 290 1.22e-42 149
MS.gene065523.t1 AT4G16230 37.004 227 126 7 2 220 28 245 1.71e-42 145
MS.gene065523.t1 AT2G24560 34.307 274 166 7 1 267 31 297 2.27e-42 147
MS.gene065523.t1 AT1G74460 32.830 265 168 4 6 266 25 283 1.89e-41 146
MS.gene065523.t1 AT2G40250 33.696 276 165 5 2 267 34 301 1.95e-41 146
MS.gene065523.t1 AT5G45670 35.018 277 162 9 1 269 26 292 2.86e-41 145
MS.gene065523.t1 AT4G18970 32.971 276 169 8 1 269 25 291 3.92e-41 145
MS.gene065523.t1 AT1G20120 33.210 271 164 7 3 266 77 337 4.82e-41 146
MS.gene065523.t1 AT2G30310 34.432 273 165 7 1 266 31 296 5.49e-41 145
MS.gene065523.t1 AT2G24560 34.066 273 166 7 1 266 31 296 6.16e-41 145
MS.gene065523.t1 AT4G18970 32.971 276 169 8 1 269 25 291 1.53e-40 145
MS.gene065523.t1 AT5G33370 31.343 268 172 4 4 266 30 290 3.26e-40 142
MS.gene065523.t1 AT2G30220 34.066 273 166 7 1 266 30 295 3.33e-40 142
MS.gene065523.t1 AT5G33370 31.343 268 172 4 4 266 30 290 5.74e-40 142
MS.gene065523.t1 AT5G03820 34.432 273 164 6 1 266 30 294 8.34e-40 142
MS.gene065523.t1 AT5G45950 32.584 267 169 6 2 266 38 295 1.62e-39 141
MS.gene065523.t1 AT5G03820 34.432 273 164 6 1 266 58 322 2.10e-39 141
MS.gene065523.t1 AT1G75920 35.897 273 160 7 3 268 28 292 2.69e-39 140
MS.gene065523.t1 AT1G20130 34.657 277 161 6 2 266 182 450 4.49e-39 142
MS.gene065523.t1 AT3G16370 32.727 275 172 6 1 270 27 293 6.38e-39 139
MS.gene065523.t1 AT5G45960 33.333 276 164 8 2 266 45 311 6.85e-39 139
MS.gene065523.t1 AT1G20130 34.657 277 161 6 2 266 202 470 6.97e-39 142
MS.gene065523.t1 AT4G10950 30.000 270 177 4 2 266 69 331 8.15e-39 140
MS.gene065523.t1 AT5G22810 32.482 274 169 7 1 266 31 296 8.35e-39 139
MS.gene065523.t1 AT1G33811 32.979 282 166 9 2 270 32 303 1.72e-38 138
MS.gene065523.t1 AT5G18430 32.593 270 168 5 4 266 28 290 4.29e-38 137
MS.gene065523.t1 AT5G03810 32.721 272 169 6 1 266 27 290 7.71e-38 136
MS.gene065523.t1 AT2G31540 33.942 274 165 9 1 266 32 297 1.68e-37 135
MS.gene065523.t1 AT1G53920 32.593 270 165 8 2 266 46 303 3.92e-37 135
MS.gene065523.t1 AT4G28780 30.970 268 173 4 4 266 31 291 1.27e-36 133
MS.gene065523.t1 AT1G75880 32.234 273 175 4 2 270 50 316 1.41e-36 134
MS.gene065523.t1 AT4G26790 33.088 272 163 8 3 266 28 288 1.67e-36 133
MS.gene065523.t1 AT4G26790 33.088 272 163 8 3 266 28 288 1.67e-36 133
MS.gene065523.t1 AT2G03980 34.766 256 153 5 3 255 42 286 2.95e-36 132
MS.gene065523.t1 AT2G03980 34.766 256 153 5 3 255 42 286 2.95e-36 132
MS.gene065523.t1 AT2G03980 34.766 256 153 5 3 255 42 286 2.95e-36 132
MS.gene065523.t1 AT2G03980 34.766 256 153 5 3 255 42 286 2.95e-36 132
MS.gene065523.t1 AT1G75920 34.375 288 159 8 3 268 23 302 2.97e-36 132
MS.gene065523.t1 AT1G20135 31.273 275 169 7 4 270 29 291 2.97e-36 132
MS.gene065523.t1 AT1G75880 32.234 273 174 5 2 270 50 315 9.74e-36 131
MS.gene065523.t1 AT1G75890 30.882 272 178 4 3 270 46 311 1.14e-35 131
MS.gene065523.t1 AT4G10950 30.000 270 173 5 2 266 69 327 1.20e-35 131
MS.gene065523.t1 AT1G75890 30.882 272 178 4 3 270 75 340 2.38e-35 130
MS.gene065523.t1 AT3G04290 30.855 269 172 6 4 266 29 289 2.44e-35 130
MS.gene065523.t1 AT1G71120 31.618 272 168 8 2 268 29 287 5.22e-35 129
MS.gene065523.t1 AT1G75910 33.818 275 164 9 3 268 27 292 1.75e-34 127
MS.gene065523.t1 AT1G75890 29.577 284 179 4 3 270 46 324 3.61e-34 127
MS.gene065523.t1 AT1G20132 33.457 269 166 7 3 266 60 320 4.20e-34 127
MS.gene065523.t1 AT1G73610 32.721 272 163 7 2 266 33 291 8.83e-33 123
MS.gene065523.t1 AT4G30140 31.618 272 162 9 3 269 32 284 3.91e-32 121
MS.gene065523.t1 AT5G63170 31.716 268 172 6 2 266 26 285 5.55e-32 120
MS.gene065523.t1 AT1G75900 29.197 274 182 5 1 270 40 305 1.23e-31 120
MS.gene065523.t1 AT1G75930 32.967 273 170 7 4 270 29 294 1.23e-31 120
MS.gene065523.t1 AT3G14820 31.387 274 171 8 2 270 30 291 1.84e-31 119
MS.gene065523.t1 AT1G53940 32.090 268 168 6 4 266 39 297 1.89e-31 118
MS.gene065523.t1 AT2G04020 37.073 205 116 5 3 205 42 235 2.66e-31 117
MS.gene065523.t1 AT2G19060 31.022 274 162 9 1 267 27 280 2.80e-31 119
MS.gene065523.t1 AT2G19050 32.171 258 153 9 2 253 29 270 3.04e-31 117
MS.gene065523.t1 AT2G04020 37.073 205 116 5 3 205 42 235 8.26e-31 117
MS.gene065523.t1 AT1G53940 32.090 268 168 6 4 266 39 297 9.16e-31 118
MS.gene065523.t1 AT1G75920 31.985 272 141 6 3 268 28 261 1.14e-30 116
MS.gene065523.t1 AT1G53990 32.222 270 158 9 4 266 35 286 1.40e-30 117
MS.gene065523.t1 AT2G19050 32.171 258 153 9 2 253 29 270 1.47e-30 117
MS.gene065523.t1 AT5G42170 29.304 273 179 6 2 270 48 310 3.07e-30 116
MS.gene065523.t1 AT3G14225 29.368 269 176 6 4 267 37 296 3.93e-30 116
MS.gene065523.t1 AT1G58520 31.852 270 168 7 2 266 28 286 5.38e-30 115
MS.gene065523.t1 AT1G58525 31.852 270 168 7 2 266 28 286 5.38e-30 115
MS.gene065523.t1 AT5G40990 30.597 268 172 6 4 266 37 295 6.26e-30 115
MS.gene065523.t1 AT3G14225 29.151 271 178 6 4 267 37 300 6.97e-30 115
MS.gene065523.t1 AT3G43550 31.481 270 169 7 2 266 28 286 1.04e-29 113
MS.gene065523.t1 AT1G59406 31.387 274 172 7 2 270 28 290 2.90e-29 114
MS.gene065523.t1 AT1G59030 31.387 274 172 7 2 270 28 290 2.90e-29 114
MS.gene065523.t1 AT1G58725 31.387 274 172 7 2 270 28 290 2.90e-29 114
MS.gene065523.t1 AT2G19010 31.008 258 154 9 3 253 29 269 6.72e-29 112
MS.gene065523.t1 AT2G19010 31.660 259 151 11 3 253 59 299 8.18e-29 113
MS.gene065523.t1 AT1G75920 33.065 248 152 6 28 268 24 264 5.52e-28 109
MS.gene065523.t1 AT1G54030 27.376 263 166 5 5 265 53 292 2.31e-27 107
MS.gene065523.t1 AT1G54030 27.376 263 166 5 5 265 53 292 9.34e-27 108
MS.gene065523.t1 AT5G15720 29.911 224 142 5 56 270 48 265 2.44e-25 102
MS.gene065523.t1 AT3G43570 29.259 270 154 7 2 270 28 261 4.14e-25 102
MS.gene065523.t1 AT1G71691 29.108 213 146 4 60 268 1 212 7.01e-25 100
MS.gene065523.t1 AT1G23500 30.515 272 170 8 2 266 33 292 8.75e-22 93.2
MS.gene065523.t1 AT1G28640 28.671 286 164 11 4 266 35 303 1.70e-20 90.1
MS.gene065523.t1 AT1G28650 27.660 282 172 8 4 266 37 305 3.09e-20 89.4
MS.gene065523.t1 AT3G14220 28.102 274 166 11 3 268 31 281 9.42e-20 87.8
MS.gene065523.t1 AT1G54010 28.137 263 158 8 2 255 32 272 2.56e-19 87.0
MS.gene065523.t1 AT1G56670 27.915 283 161 10 3 266 39 297 2.93e-19 85.5
MS.gene065523.t1 AT5G14450 28.082 292 159 13 3 266 40 308 3.11e-19 86.7
MS.gene065523.t1 AT1G54020 26.277 274 174 8 2 270 29 279 3.79e-19 86.3
MS.gene065523.t1 AT1G54000 27.099 262 160 7 2 255 34 272 4.48e-19 86.3
MS.gene065523.t1 AT1G56670 27.915 283 161 10 3 266 39 297 8.95e-19 85.1
MS.gene065523.t1 AT2G27360 28.028 289 165 14 4 267 33 303 2.95e-18 84.0
MS.gene065523.t1 AT1G54790 27.046 281 172 9 3 266 31 295 1.04e-17 82.4
MS.gene065523.t1 AT1G28610 28.125 288 162 11 4 266 31 298 1.75e-17 81.6
MS.gene065523.t1 AT3G14210 27.308 260 158 8 4 255 36 272 2.28e-17 81.3
MS.gene065523.t1 AT1G67830 28.328 293 157 14 3 267 29 296 3.41e-17 80.9
MS.gene065523.t1 AT3G62280 27.143 280 165 10 3 266 35 291 4.42e-17 79.7
MS.gene065523.t1 AT4G16220 45.833 96 42 4 2 96 28 114 4.49e-17 79.0
MS.gene065523.t1 AT1G28590 28.322 286 165 12 4 266 36 304 4.68e-17 80.5
MS.gene065523.t1 AT3G27950 28.986 276 171 10 3 266 31 293 5.86e-17 80.1
MS.gene065523.t1 AT1G28670 27.368 285 170 10 4 266 35 304 6.87e-17 80.1
MS.gene065523.t1 AT3G62280 27.143 280 165 10 3 266 35 291 8.50e-17 79.7
MS.gene065523.t1 AT1G28570 27.817 284 169 9 4 266 34 302 1.49e-16 79.0
MS.gene065523.t1 AT1G28580 26.923 286 169 10 4 266 37 305 1.60e-16 79.0
MS.gene065523.t1 AT1G31550 28.028 289 161 11 4 266 36 303 2.33e-16 78.6
MS.gene065523.t1 AT3G48460 26.545 275 183 9 5 268 39 305 8.36e-16 76.6
MS.gene065523.t1 AT1G09390 26.978 278 170 10 3 266 36 294 8.68e-16 76.6
MS.gene065523.t1 AT1G28660 26.923 286 169 10 4 266 35 303 1.14e-15 76.6
MS.gene065523.t1 AT3G26430 27.778 288 163 13 3 266 30 296 1.37e-15 76.3
MS.gene065523.t1 AT3G05180 24.555 281 179 8 3 266 35 299 4.66e-15 74.7
MS.gene065523.t1 AT1G28660 27.875 287 164 11 4 266 35 302 7.67e-15 73.9
MS.gene065523.t1 AT1G31550 27.719 285 159 11 4 262 36 299 1.14e-14 73.6
MS.gene065523.t1 AT3G09930 25.940 266 161 9 5 261 40 278 4.22e-14 71.6
MS.gene065523.t1 AT3G09930 25.940 266 161 9 5 261 40 278 4.22e-14 71.6
MS.gene065523.t1 AT4G01130 25.000 276 183 9 4 266 34 298 1.62e-13 69.7
MS.gene065523.t1 AT1G54790 24.825 286 172 9 3 266 30 294 6.33e-13 68.6
MS.gene065523.t1 AT1G54790 24.825 286 172 9 3 266 30 294 6.89e-13 68.2
MS.gene065523.t1 AT1G28600 26.132 287 169 11 4 266 31 298 2.54e-12 66.6

Find 57 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATGTTGTCCTGTGTTC+AGG 0.282522 5.2:+78425613 MS.gene065523:CDS
TTGGGTTGCAGGTGAGAAAT+TGG 0.290039 5.2:+78423996 MS.gene065523:intron
AATAATGCATCCTTCATAAA+TGG 0.293758 5.2:+78424075 MS.gene065523:CDS
TTGCAGCGATTATATGATAA+TGG 0.318724 5.2:+78425555 MS.gene065523:intron
ATATTGAACAGACCAGTAAT+TGG 0.357855 5.2:-78425667 None:intergenic
TTTGTTACCCTTTGATACTA+AGG 0.379822 5.2:-78424046 None:intergenic
ATTGGTAGCAATGATCTCTT+TGG 0.383872 5.2:+78424846 MS.gene065523:CDS
TTTCTCAATCACAAACCAAC+TGG 0.385339 5.2:+78422904 MS.gene065523:CDS
AGCTTTGCTTCCGCAGGTGC+TGG 0.399043 5.2:+78424102 MS.gene065523:CDS
TGCAGGTGAGAAATTGGGTT+TGG 0.401633 5.2:+78424002 MS.gene065523:intron
GGACGTAAATTTGAGATTGC+TGG 0.415575 5.2:+78425579 MS.gene065523:CDS
TGGGTTGCAGGTGAGAAATT+GGG 0.416860 5.2:+78423997 MS.gene065523:intron
GCAGGTGCTGGAATATTTGA+TGG 0.421210 5.2:+78424114 MS.gene065523:CDS
GTGTTGTAGAAACCAATTAC+TGG 0.423976 5.2:+78425655 MS.gene065523:CDS
AAGGCAAATCATCGTCACTA+TGG 0.429441 5.2:+78422874 MS.gene065523:CDS
CTACTACACAAACGTGTATG+AGG 0.452090 5.2:+78424755 MS.gene065523:CDS
TTTCTACAACACATTCCGTT+TGG 0.473432 5.2:-78425644 None:intergenic
CTCACTCAAGCTCCAACTAC+AGG 0.474512 5.2:+78424935 MS.gene065523:CDS
TGGAATCAACATACTGTTGT+GGG 0.484546 5.2:-78424905 None:intergenic
AGGTCTTCAATCCATGTTGA+AGG 0.507368 5.2:+78425695 MS.gene065523:CDS
AAATTTGAGATTGCTGGAGT+GGG 0.508226 5.2:+78425585 MS.gene065523:CDS
TACCTCTCCTTAGTATCAAA+GGG 0.508304 5.2:+78424039 MS.gene065523:CDS
TTACCTCTCCTTAGTATCAA+AGG 0.511130 5.2:+78424038 MS.gene065523:CDS
GGAGATTCACTAGTAGATGT+TGG 0.512021 5.2:+78422820 MS.gene065523:CDS
ATAGTAATACCGTAGGAAGC+TGG 0.513611 5.2:-78425795 None:intergenic
CCATTGCTAAATCTCCCAGT+TGG 0.516556 5.2:-78422919 None:intergenic
TTCAATCCATGTTGAAGGAA+TGG 0.518615 5.2:+78425700 MS.gene065523:CDS
AAAGCTAACACCATTTATGA+AGG 0.528962 5.2:-78424085 None:intergenic
TACTGTGACATACCTGTAGT+TGG 0.531750 5.2:-78424947 None:intergenic
CTTGTCTCTTTCCATTGCCA+AGG 0.534080 5.2:+78422855 MS.gene065523:CDS
GGTGTTAGCTTTGCTTCCGC+AGG 0.536219 5.2:+78424096 MS.gene065523:CDS
ACGATGATTTGCCTTGGCAA+TGG 0.554902 5.2:-78422866 None:intergenic
TAAATTTGAGATTGCTGGAG+TGG 0.565012 5.2:+78425584 MS.gene065523:CDS
TAGTTCACTTGCTTTGTCAA+CGG 0.568752 5.2:-78424735 None:intergenic
TGAGGAACTAACAAGAGAAG+TGG 0.569647 5.2:+78424773 MS.gene065523:CDS
TTCTCAATCACAAACCAACT+GGG 0.571364 5.2:+78422905 MS.gene065523:CDS
ATGGAATCAACATACTGTTG+TGG 0.572326 5.2:-78424906 None:intergenic
ATCAAATATTCCAGCACCTG+CGG 0.581876 5.2:-78424112 None:intergenic
GAATGGCAATCAGAGAATCA+AGG 0.582456 5.2:+78425717 MS.gene065523:CDS
ATTCAAAATCCAGCTTCCTA+CGG 0.583941 5.2:+78425786 MS.gene065523:CDS
ATAGTGACGATGATTTGCCT+TGG 0.588672 5.2:-78422872 None:intergenic
TGATTGCCATTCCTTCAACA+TGG 0.593201 5.2:-78425706 None:intergenic
ATTTGAGATTGCTGGAGTGG+GGG 0.593947 5.2:+78425587 MS.gene065523:CDS
GTTCAGGCTCAAGAACCAAA+CGG 0.594427 5.2:+78425629 MS.gene065523:CDS
CAGCGATTATATGATAATGG+TGG 0.595995 5.2:+78425558 MS.gene065523:intron
TTTGATACTAAGGAGAGGTA+AGG 0.597356 5.2:-78424036 None:intergenic
AATTTGAGATTGCTGGAGTG+GGG 0.599742 5.2:+78425586 MS.gene065523:CDS
GAGGAACTAACAAGAGAAGT+GGG 0.620148 5.2:+78424774 MS.gene065523:CDS
GATACTAAGGAGAGGTAAGG+TGG 0.623561 5.2:-78424033 None:intergenic
GAGCTTGAGTGAGAAAAGCA+TGG 0.627829 5.2:-78424925 None:intergenic
TGGTCTGTTCAATATAACAA+AGG 0.632213 5.2:+78425675 MS.gene065523:CDS
TACCCTTTGATACTAAGGAG+AGG 0.641459 5.2:-78424041 None:intergenic
TGGTTCTTGAGCCTGAACAC+AGG 0.653267 5.2:-78425624 None:intergenic
CTAAGCGATAGTAATACCGT+AGG 0.681545 5.2:-78425802 None:intergenic
GGAATCAACATACTGTTGTG+GGG 0.696161 5.2:-78424904 None:intergenic
CCAACTGGGAGATTTAGCAA+TGG 0.702849 5.2:+78422919 MS.gene065523:CDS
TTGAATGAGATCGTTCATGG+CGG 0.730479 5.2:-78425769 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCCATTTTTAAAATATAAT+TGG + chr5.2:78425174-78425193 MS.gene065523:intron 10.0%
!! AAAATTGCAAAAAAGAAATA+TGG - chr5.2:78423457-78423476 None:intergenic 15.0%
!! AACATAACAGAATATAATAA+TGG - chr5.2:78425498-78425517 None:intergenic 15.0%
!! AATAAAAAAATGTTATTGTG+CGG + chr5.2:78424596-78424615 MS.gene065523:intron 15.0%
!! CATTCAAAAGAATATAAAAT+TGG - chr5.2:78424164-78424183 None:intergenic 15.0%
!! GAAAATATTAAAGACTATTT+AGG - chr5.2:78424263-78424282 None:intergenic 15.0%
!!! AAAATATGATTTGATGTTTT+TGG - chr5.2:78423148-78423167 None:intergenic 15.0%
!!! AATCATATACAATTTCTTTT+TGG - chr5.2:78423970-78423989 None:intergenic 15.0%
!!! AATTGGATATATATTTTATG+GGG + chr5.2:78423394-78423413 MS.gene065523:intron 15.0%
!!! ATTGTATATGATTAATTTGT+TGG + chr5.2:78423977-78423996 MS.gene065523:intron 15.0%
!!! ATTTCTCTTGTTTTTTATTT+TGG - chr5.2:78423659-78423678 None:intergenic 15.0%
!!! CAATTGGATATATATTTTAT+GGG + chr5.2:78423393-78423412 MS.gene065523:intron 15.0%
!!! CACCAATTATATTTTAAAAA+TGG - chr5.2:78425179-78425198 None:intergenic 15.0%
!!! CTATCATTTTTGTAATATAT+TGG + chr5.2:78423015-78423034 MS.gene065523:intron 15.0%
!!! GAAATATGGTTTTTTTTTTT+TGG - chr5.2:78423443-78423462 None:intergenic 15.0%
!!! TAATAATGACATTTTTTTGA+AGG - chr5.2:78423761-78423780 None:intergenic 15.0%
!!! TCAATTGGATATATATTTTA+TGG + chr5.2:78423392-78423411 MS.gene065523:intron 15.0%
!!! TTGTATATGATTAATTTGTT+GGG + chr5.2:78423978-78423997 MS.gene065523:intron 15.0%
!!! TTTTTTTTGGTTCAAAAATA+TGG - chr5.2:78423430-78423449 None:intergenic 15.0%
!! ACCATTTATATTCTTGTAAT+AGG - chr5.2:78423610-78423629 None:intergenic 20.0%
!! AGTCATTTAACAAAAAAATC+TGG + chr5.2:78423797-78423816 MS.gene065523:intron 20.0%
!! ATAAAAAACAAGAGAAATGA+TGG + chr5.2:78423661-78423680 MS.gene065523:intron 20.0%
!! ATATATAATATCCCAAATAG+AGG + chr5.2:78424455-78424474 MS.gene065523:intron 20.0%
!! TAACATAAGAAAAAGACAAA+TGG - chr5.2:78423898-78423917 None:intergenic 20.0%
!! TCCTATTACAAGAATATAAA+TGG + chr5.2:78423606-78423625 MS.gene065523:intron 20.0%
!! TGAAATTTCAAGCAATAAAT+AGG + chr5.2:78425398-78425417 MS.gene065523:intron 20.0%
!! TGGAAAAAACATAATTACAT+GGG + chr5.2:78423527-78423546 MS.gene065523:intron 20.0%
!!! AAAATCTGGTTATTTTATTG+AGG + chr5.2:78423811-78423830 MS.gene065523:intron 20.0%
!!! AATAATCAACACATGAATTT+TGG - chr5.2:78423047-78423066 None:intergenic 20.0%
!!! ACATCAAATCATATTTTCTA+TGG + chr5.2:78423151-78423170 MS.gene065523:intron 20.0%
!!! TAGTTATATAGTTTTTCCTT+AGG + chr5.2:78425043-78425062 MS.gene065523:intron 20.0%
!!! TGTCTTTTTCTTATGTTAAT+CGG + chr5.2:78423900-78423919 MS.gene065523:intron 20.0%
!!! TTTCTTTAATTTTTTTGTGC+TGG - chr5.2:78424577-78424596 None:intergenic 20.0%
! AAAAGACAAATGGAATGAAT+TGG - chr5.2:78423888-78423907 None:intergenic 25.0%
! AAATGAGTAGATTAATTAGC+AGG - chr5.2:78423283-78423302 None:intergenic 25.0%
! AATAATGCATCCTTCATAAA+TGG + chr5.2:78424075-78424094 MS.gene065523:CDS 25.0%
! CTGATATACACACATATTAT+TGG - chr5.2:78423320-78423339 None:intergenic 25.0%
! GAATTAGTAATTACATGTGT+CGG - chr5.2:78425157-78425176 None:intergenic 25.0%
! GTGGAAAAAACATAATTACA+TGG + chr5.2:78423526-78423545 MS.gene065523:intron 25.0%
! TAACAGAATATAATAATGGC+TGG - chr5.2:78425494-78425513 None:intergenic 25.0%
! TTCATAACCACATTTATCAA+TGG + chr5.2:78425438-78425457 MS.gene065523:intron 25.0%
!! AAATGATTAGAATTCGAGTT+AGG - chr5.2:78424191-78424210 None:intergenic 25.0%
!! ATTTAGGATATTATTCGTCA+TGG - chr5.2:78424247-78424266 None:intergenic 25.0%
!!! AAAAATGCTGCTGATTTTAT+TGG + chr5.2:78422943-78422962 MS.gene065523:CDS 25.0%
!!! AAAAGTAGTGCATTTTAACA+AGG + chr5.2:78425008-78425027 MS.gene065523:intron 25.0%
!!! ATATTTCTAGTCGAAAATAC+AGG - chr5.2:78423184-78423203 None:intergenic 25.0%
AAAGCTAACACCATTTATGA+AGG - chr5.2:78424088-78424107 None:intergenic 30.0%
ATAATATCCCAAATAGAGGT+GGG + chr5.2:78424459-78424478 MS.gene065523:intron 30.0%
ATATTGAACAGACCAGTAAT+TGG - chr5.2:78425670-78425689 None:intergenic 30.0%
ATTCTGTTATGTTTGCTTAG+AGG + chr5.2:78425505-78425524 MS.gene065523:intron 30.0%
ATTTATCAATGGCGTACATA+TGG + chr5.2:78425449-78425468 MS.gene065523:intron 30.0%
TATAATATCCCAAATAGAGG+TGG + chr5.2:78424458-78424477 MS.gene065523:intron 30.0%
TATTAAGACGTGTATGACAA+CGG - chr5.2:78425117-78425136 None:intergenic 30.0%
TGGTCTGTTCAATATAACAA+AGG + chr5.2:78425675-78425694 MS.gene065523:CDS 30.0%
TTAAGTGTAACAACAACCTA+AGG - chr5.2:78425062-78425081 None:intergenic 30.0%
TTAGATGAAAATGTTGTGTG+TGG - chr5.2:78425341-78425360 None:intergenic 30.0%
TTATTTATGTGTACGTCACA+AGG + chr5.2:78425259-78425278 MS.gene065523:intron 30.0%
TTGCAGCGATTATATGATAA+TGG + chr5.2:78425555-78425574 MS.gene065523:intron 30.0%
TTTGTTACCCTTTGATACTA+AGG - chr5.2:78424049-78424068 None:intergenic 30.0%
! AAGTTGGACTATTTTGTGAT+TGG - chr5.2:78425299-78425318 None:intergenic 30.0%
! ATTTTGAATGAGATCGTTCA+TGG - chr5.2:78425775-78425794 None:intergenic 30.0%
! CACTTTAGCAGATTTAAAGT+TGG - chr5.2:78425315-78425334 None:intergenic 30.0%
! GTTGTTGTTACACTTAAGTA+CGG + chr5.2:78425065-78425084 MS.gene065523:intron 30.0%
!! CTGGTTATTTTATTGAGGTA+TGG + chr5.2:78423816-78423835 MS.gene065523:intron 30.0%
!!! TCAATTTTTGCTGTTGTGAT+TGG + chr5.2:78424828-78424847 MS.gene065523:CDS 30.0%
AAAGTAATATGCGCGTCAAT+TGG + chr5.2:78423377-78423396 MS.gene065523:intron 35.0%
AATGGCTGGTAAATGAGATA+TGG - chr5.2:78425480-78425499 None:intergenic 35.0%
AGATTGTTGTCTATCTCTAG+AGG + chr5.2:78424513-78424532 MS.gene065523:intron 35.0%
ATGCATGCATGTACTTATAG+AGG - chr5.2:78423691-78423710 None:intergenic 35.0%
ATGGAATCAACATACTGTTG+TGG - chr5.2:78424909-78424928 None:intergenic 35.0%
ATGTACGCCATTGATAAATG+TGG - chr5.2:78425448-78425467 None:intergenic 35.0%
ATTCAAAATCCAGCTTCCTA+CGG + chr5.2:78425786-78425805 MS.gene065523:CDS 35.0%
CAAATCAAAGTCGATCACAT+GGG - chr5.2:78423495-78423514 None:intergenic 35.0%
GAGTAGATTAATTAGCAGGT+TGG - chr5.2:78423279-78423298 None:intergenic 35.0%
GATCACATGGGTTTATTTGA+AGG - chr5.2:78423483-78423502 None:intergenic 35.0%
GATCCATGTCACTACTATAA+GGG - chr5.2:78424546-78424565 None:intergenic 35.0%
GTCTTGCAAACCTAACTTAT+GGG - chr5.2:78424485-78424504 None:intergenic 35.0%
GTGTTGTAGAAACCAATTAC+TGG + chr5.2:78425655-78425674 MS.gene065523:CDS 35.0%
TACCTCTCCTTAGTATCAAA+GGG + chr5.2:78424039-78424058 MS.gene065523:CDS 35.0%
TAGTTCACTTGCTTTGTCAA+CGG - chr5.2:78424738-78424757 None:intergenic 35.0%
TCTCCAAAAACATAAACAGC+AGG - chr5.2:78422805-78422824 None:intergenic 35.0%
TGATCCATGTCACTACTATA+AGG - chr5.2:78424547-78424566 None:intergenic 35.0%
TGGAATCAACATACTGTTGT+GGG - chr5.2:78424908-78424927 None:intergenic 35.0%
TGTCTTGCAAACCTAACTTA+TGG - chr5.2:78424486-78424505 None:intergenic 35.0%
TTACCTCTCCTTAGTATCAA+AGG + chr5.2:78424038-78424057 MS.gene065523:CDS 35.0%
TTCAATCCATGTTGAAGGAA+TGG + chr5.2:78425700-78425719 MS.gene065523:CDS 35.0%
TTCTCAATCACAAACCAACT+GGG + chr5.2:78422905-78422924 MS.gene065523:CDS 35.0%
TTTCTACAACACATTCCGTT+TGG - chr5.2:78425647-78425666 None:intergenic 35.0%
TTTCTCAATCACAAACCAAC+TGG + chr5.2:78422904-78422923 MS.gene065523:CDS 35.0%
TTTGATACTAAGGAGAGGTA+AGG - chr5.2:78424039-78424058 None:intergenic 35.0%
! AAATTTGAGATTGCTGGAGT+GGG + chr5.2:78425585-78425604 MS.gene065523:CDS 35.0%
! ATTGGTAGCAATGATCTCTT+TGG + chr5.2:78424846-78424865 MS.gene065523:CDS 35.0%
! TAAATTTGAGATTGCTGGAG+TGG + chr5.2:78425584-78425603 MS.gene065523:CDS 35.0%
! TTTTGTGATTGGTGCATGTT+AGG - chr5.2:78425288-78425307 None:intergenic 35.0%
!! CAGCGATTATATGATAATGG+TGG + chr5.2:78425558-78425577 MS.gene065523:intron 35.0%
!! GTTCCTGCTGTTTATGTTTT+TGG + chr5.2:78422799-78422818 MS.gene065523:CDS 35.0%
!! TGATTAATTTGTTGGGTTGC+AGG + chr5.2:78423985-78424004 MS.gene065523:intron 35.0%
AAGGCAAATCATCGTCACTA+TGG + chr5.2:78422874-78422893 MS.gene065523:CDS 40.0%
ACATGGGATGCAGAAATAGA+TGG + chr5.2:78423543-78423562 MS.gene065523:intron 40.0%
AGGTCTTCAATCCATGTTGA+AGG + chr5.2:78425695-78425714 MS.gene065523:CDS 40.0%
ATAGTAATACCGTAGGAAGC+TGG - chr5.2:78425798-78425817 None:intergenic 40.0%
ATCAAATATTCCAGCACCTG+CGG - chr5.2:78424115-78424134 None:intergenic 40.0%
CCAAATCAAAGTCGATCACA+TGG - chr5.2:78423496-78423515 None:intergenic 40.0%
CTAAGCGATAGTAATACCGT+AGG - chr5.2:78425805-78425824 None:intergenic 40.0%
CTACTACACAAACGTGTATG+AGG + chr5.2:78424755-78424774 MS.gene065523:CDS 40.0%
GAATGGCAATCAGAGAATCA+AGG + chr5.2:78425717-78425736 MS.gene065523:CDS 40.0%
GAGGAACTAACAAGAGAAGT+GGG + chr5.2:78424774-78424793 MS.gene065523:CDS 40.0%
GGAATCAACATACTGTTGTG+GGG - chr5.2:78424907-78424926 None:intergenic 40.0%
GGAGATTCACTAGTAGATGT+TGG + chr5.2:78422820-78422839 MS.gene065523:CDS 40.0%
TACCCTTTGATACTAAGGAG+AGG - chr5.2:78424044-78424063 None:intergenic 40.0%
TACTGTGACATACCTGTAGT+TGG - chr5.2:78424950-78424969 None:intergenic 40.0%
TGAGGAACTAACAAGAGAAG+TGG + chr5.2:78424773-78424792 MS.gene065523:CDS 40.0%
TGATTGCCATTCCTTCAACA+TGG - chr5.2:78425709-78425728 None:intergenic 40.0%
TTGAATGAGATCGTTCATGG+CGG - chr5.2:78425772-78425791 None:intergenic 40.0%
TTTCGATGCATATCACCAAG+CGG - chr5.2:78424686-78424705 None:intergenic 40.0%
! AATTTGAGATTGCTGGAGTG+GGG + chr5.2:78425586-78425605 MS.gene065523:CDS 40.0%
! ATAGTGACGATGATTTGCCT+TGG - chr5.2:78422875-78422894 None:intergenic 40.0%
! CCATGTGATCGACTTTGATT+TGG + chr5.2:78423493-78423512 MS.gene065523:intron 40.0%
! GGACGTAAATTTGAGATTGC+TGG + chr5.2:78425579-78425598 MS.gene065523:CDS 40.0%
! TGTCTATCTCTAGAGGATGT+GGG + chr5.2:78424520-78424539 MS.gene065523:intron 40.0%
! TTGTCTATCTCTAGAGGATG+TGG + chr5.2:78424519-78424538 MS.gene065523:intron 40.0%
!! TTGATTTGGTGAACTGAGAG+TGG + chr5.2:78423507-78423526 MS.gene065523:intron 40.0%
ACACACACGAAGATTGGACA+AGG - chr5.2:78425216-78425235 None:intergenic 45.0%
ACACAGACACACACGAAGAT+TGG - chr5.2:78425222-78425241 None:intergenic 45.0%
CCAACTGGGAGATTTAGCAA+TGG + chr5.2:78422919-78422938 MS.gene065523:CDS 45.0%
CCATTGCTAAATCTCCCAGT+TGG - chr5.2:78422922-78422941 None:intergenic 45.0%
CTTGTCTCTTTCCATTGCCA+AGG + chr5.2:78422855-78422874 MS.gene065523:CDS 45.0%
GAGCTTGAGTGAGAAAAGCA+TGG - chr5.2:78424928-78424947 None:intergenic 45.0%
GATACTAAGGAGAGGTAAGG+TGG - chr5.2:78424036-78424055 None:intergenic 45.0%
GTTCAGGCTCAAGAACCAAA+CGG + chr5.2:78425629-78425648 MS.gene065523:CDS 45.0%
TGCAGGTGAGAAATTGGGTT+TGG + chr5.2:78424002-78424021 MS.gene065523:intron 45.0%
TGGGTTGCAGGTGAGAAATT+GGG + chr5.2:78423997-78424016 MS.gene065523:intron 45.0%
TTATGGGCCCACCTCTATTT+GGG - chr5.2:78424469-78424488 None:intergenic 45.0%
TTCGATGCATATCACCAAGC+GGG - chr5.2:78424685-78424704 None:intergenic 45.0%
TTGGATGTTGTCCTGTGTTC+AGG + chr5.2:78425613-78425632 MS.gene065523:CDS 45.0%
! ACGATGATTTGCCTTGGCAA+TGG - chr5.2:78422869-78422888 None:intergenic 45.0%
! ATTTGAGATTGCTGGAGTGG+GGG + chr5.2:78425587-78425606 MS.gene065523:CDS 45.0%
! TTGGGTTGCAGGTGAGAAAT+TGG + chr5.2:78423996-78424015 MS.gene065523:intron 45.0%
!! GCAGGTGCTGGAATATTTGA+TGG + chr5.2:78424114-78424133 MS.gene065523:CDS 45.0%
ATGTTATTGTGCGGTGAGCG+TGG + chr5.2:78424605-78424624 MS.gene065523:intron 50.0%
CTCACTCAAGCTCCAACTAC+AGG + chr5.2:78424935-78424954 MS.gene065523:CDS 50.0%
CTTATGGGCCCACCTCTATT+TGG - chr5.2:78424470-78424489 None:intergenic 50.0%
GCGTCAGACTGAAGATCTGA+AGG - chr5.2:78424644-78424663 None:intergenic 50.0%
GGGCCCTTATAGTAGTGACA+TGG + chr5.2:78424540-78424559 MS.gene065523:intron 50.0%
TAGAGGTGGGCCCATAAGTT+AGG + chr5.2:78424472-78424491 MS.gene065523:intron 50.0%
TCGATGCATATCACCAAGCG+GGG - chr5.2:78424684-78424703 None:intergenic 50.0%
TGGTTCTTGAGCCTGAACAC+AGG - chr5.2:78425627-78425646 None:intergenic 50.0%
CAAGCGGGGATAGCTCAGTT+GGG - chr5.2:78424670-78424689 None:intergenic 55.0%
!! GGTGTTAGCTTTGCTTCCGC+AGG + chr5.2:78424096-78424115 MS.gene065523:CDS 55.0%
AGCTTTGCTTCCGCAGGTGC+TGG + chr5.2:78424102-78424121 MS.gene065523:CDS 60.0%
CCAACTGAGCTATCCCCGCT+TGG + chr5.2:78424668-78424687 MS.gene065523:intron 60.0%
CCAAGCGGGGATAGCTCAGT+TGG - chr5.2:78424671-78424690 None:intergenic 60.0%
!! ATTGCTGGAGTGGGGGCACT+TGG + chr5.2:78425594-78425613 MS.gene065523:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 78422796 78425824 78422796 ID=MS.gene065523
chr5.2 mRNA 78422796 78425824 78422796 ID=MS.gene065523.t1;Parent=MS.gene065523
chr5.2 exon 78422796 78422964 78422796 ID=MS.gene065523.t1.exon1;Parent=MS.gene065523.t1
chr5.2 CDS 78422796 78422964 78422796 ID=cds.MS.gene065523.t1;Parent=MS.gene065523.t1
chr5.2 exon 78424007 78424152 78424007 ID=MS.gene065523.t1.exon2;Parent=MS.gene065523.t1
chr5.2 CDS 78424007 78424152 78424007 ID=cds.MS.gene065523.t1;Parent=MS.gene065523.t1
chr5.2 exon 78424723 78424956 78424723 ID=MS.gene065523.t1.exon3;Parent=MS.gene065523.t1
chr5.2 CDS 78424723 78424956 78424723 ID=cds.MS.gene065523.t1;Parent=MS.gene065523.t1
chr5.2 exon 78425561 78425824 78425561 ID=MS.gene065523.t1.exon4;Parent=MS.gene065523.t1
chr5.2 CDS 78425561 78425824 78425561 ID=cds.MS.gene065523.t1;Parent=MS.gene065523.t1
Gene Sequence

>MS.gene065523

ATGGTTCCTGCTGTTTATGTTTTTGGAGATTCACTAGTAGATGTTGGCAACAACAATTACTTGTCTCTTTCCATTGCCAAGGCAAATCATCGTCACTATGGTGTTGATTTTCTCAATCACAAACCAACTGGGAGATTTAGCAATGGCAAAAATGCTGCTGATTTTATTGGTATGATTCAAAATTCAATTGATTCAACTAACTCTTCAAATATATTACTACTATCATTTTTGTAATATATTGGTATGATCCAAAATTCATGTGTTGATTATTACATATGATATCTTTGATGATAGAAATCTTTTTTTTTTTGAAGTAATTGATGATAGCAATCTTGTTATCATTGAAATTCCAAAAACATCAAATCATATTTTCTATGGTCATTAGCCTGTATTTTCGACTAGAAATATTAGTGATCAAATAGCTTAAATATTATTATCTCTGTTTTTATATAGTTTTGAAAATATAAATATTTTCATACTCCAACCTGCTAATTAATCTACTCATTTTAAATTAATAATCACCAATAATATGTGTGTATATCAGATATTATACTTGTTTTTTGAATATTATTCTTTAAAAAAAAGTAATATGCGCGTCAATTGGATATATATTTTATGGGGTCAAAATAATCCATATTTTTGAACCAAAAAAAAAAAACCATATTTCTTTTTTGCAATTTTTTTCCTTCAAATAAACCCATGTGATCGACTTTGATTTGGTGAACTGAGAGTGGAAAAAACATAATTACATGGGATGCAGAAATAGATGGAATTGCTCAACAAACTTGAGAAAACTTTAAAAAGTTTATTTCCTATTACAAGAATATAAATGGTTTTTTTCTTCATAAAACACGATATGACCAAAATAAAAAACAAGAGAAATGATGGCAAGCCTCTATAAGTACATGCATGCATACATACATACATGTAAAGTTCAAGTGTTAATGTCATTATTAACTTTTCCTTCAAAAAAATGTCATTATTAACTTCTGATTATTTTAAGTCATTTAACAAAAAAATCTGGTTATTTTATTGAGGTATGGACACTATAGTAAATTATTATAGACACGTGTATTGACAATAGAGTTTCCAATTCATTCCATTTGTCTTTTTCTTATGTTAATCGGTTCTATTTGTATTTGTCTCAAACGAAAATATATACGATTAAATTCCAAAAAGAAATTGTATATGATTAATTTGTTGGGTTGCAGGTGAGAAATTGGGTTTGGCAACTTCACCACCTTACCTCTCCTTAGTATCAAAGGGTAACAAAAGTGAAAATAATGCATCCTTCATAAATGGTGTTAGCTTTGCTTCCGCAGGTGCTGGAATATTTGATGGTACAGATGAACGCTATGTAAGTCACCAATTTTATATTCTTTTGAATGAAGACCTAACTCGAATTCTAATCATTTTTTTCGATCGAATCTAATATCGATCTAATTTAGCCATGACGAATAATATCCTAAATAGTCTTTAATATTTTCATTTTTTTTTGACAAATAACATTTTCATTTTTGTTTTTGTAAATTAGTTTTTATGTTATAATAAGTCAGAGTAACTTAGATCATGAGAAAATTATGAAAGACTAAATTGAATTTTTGATATTTTTTTTTTGCAGTAGCAAATTTCATTTTAATTTTCATATTTTTTGTGCTTATATATAATATCCCAAATAGAGGTGGGCCCATAAGTTAGGTTTGCAAGACAAAGTCAAAGATTGTTGTCTATCTCTAGAGGATGTGGGCCCTTATAGTAGTGACATGGATCACTTTACGCCAGCACAAAAAAATTAAAGAAAATAAAAAAATGTTATTGTGCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTCAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCTTGGTGATATGCATCGAAATCATTTCTGTTTTGTAGAGACAATCGTTGCCGTTGACAAAGCAAGTGAACTACTACACAAACGTGTATGAGGAACTAACAAGAGAAGTGGGAGCAAGTGCTTTACAGAAACATCTCTCAAAATCAATTTTTGCTGTTGTGATTGGTAGCAATGATCTCTTTGGATATTTTGAGTCATCTGAATTTCGTAAGAAAAATACCCCACAACAGTATGTTGATTCCATGCTTTTCTCACTCAAGCTCCAACTACAGGTATGTCACAGTAACTCAGCATTATGTTAATTATTTAGTTTCATTGTATGCAAAAGTAGTGCATTTTAACAAGGAACATTTACTTTTAGTTATATAGTTTTTCCTTAGGTTGTTGTTACACTTAAGTACGGACTAGTACTTCAAATTAAAAGTGTGTCCGTTGTCATACACGTCTTAATATCAAGACTAACACGATACCGACACATGTAATTACTAATTCCATTTTTAAAATATAATTGGTGTCGACATATTATTGCCTTGTCCAATCTTCGTGTGTGTCTGTGTAGTTGATTCATATATTGTTATTTATGTGTACGTCACAAGGATGCCTAACATGCACCAATCACAAAATAGTCCAACTTTAAATCTGCTAAAGTGATTCCACACACAACATTTTCATCTAAAATTTAAAATATAAAGTATATTCATTCTCATCAAATATGAAATTTCAAGCAATAAATAGGCTATTACTGTATTTCGATTCATAACCACATTTATCAATGGCGTACATATGGTTGAACCATATCTCATTTACCAGCCATTATTATATTCTGTTATGTTTGCTTAGAGGATACATTCTTATTTATGTTTTTAATTTTTGCAGCGATTATATGATAATGGTGGACGTAAATTTGAGATTGCTGGAGTGGGGGCACTTGGATGTTGTCCTGTGTTCAGGCTCAAGAACCAAACGGAATGTGTTGTAGAAACCAATTACTGGTCTGTTCAATATAACAAAGGTCTTCAATCCATGTTGAAGGAATGGCAATCAGAGAATCAAGGCATAATGTACTCTTACTTTGACACTTACGCCGCCATGAACGATCTCATTCAAAATCCAGCTTCCTACGGTATTACTATCGCTTAG
Protein sequence

>MS.gene065523.t1

MVPAVYVFGDSLVDVGNNNYLSLSIAKANHRHYGVDFLNHKPTGRFSNGKNAADFIGEKLGLATSPPYLSLVSKGNKSENNASFINGVSFASAGAGIFDGTDERYRQSLPLTKQVNYYTNVYEELTREVGASALQKHLSKSIFAVVIGSNDLFGYFESSEFRKKNTPQQYVDSMLFSLKLQLQRLYDNGGRKFEIAGVGALGCCPVFRLKNQTECVVETNYWSVQYNKGLQSMLKEWQSENQGIMYSYFDTYAAMNDLIQNPASYGITIA