Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066069.t1 | XP_013470218.1 | 99.8 | 496 | 1 | 0 | 1 | 496 | 1 | 496 | 6.60E-259 | 902.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066069.t1 | Q869R1 | 27.2 | 364 | 253 | 6 | 114 | 472 | 199 | 555 | 9.0e-31 | 136.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066069.t1 | A0A072VRF2 | 99.8 | 496 | 1 | 0 | 1 | 496 | 1 | 496 | 4.8e-259 | 902.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050961 | MS.gene066069 | 0.823291 | 1.50E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene066069 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene066069 | 0.81604 | 6.79E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene066069 | -0.810673 | 1.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066069.t1 | MTR_1g111330 | 99.597 | 496 | 2 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1003 |
| MS.gene066069.t1 | MTR_5g054780 | 80.000 | 485 | 94 | 1 | 13 | 494 | 7 | 491 | 0.0 | 770 |
| MS.gene066069.t1 | MTR_1g111330 | 99.145 | 351 | 3 | 0 | 1 | 351 | 1 | 351 | 0.0 | 702 |
| MS.gene066069.t1 | MTR_4g108910 | 84.247 | 146 | 10 | 1 | 351 | 496 | 2 | 134 | 1.00e-81 | 249 |
| MS.gene066069.t1 | MTR_3g033520 | 26.689 | 296 | 203 | 3 | 156 | 451 | 242 | 523 | 9.53e-28 | 117 |
| MS.gene066069.t1 | MTR_3g033520 | 26.689 | 296 | 203 | 3 | 156 | 451 | 261 | 542 | 9.60e-28 | 117 |
| MS.gene066069.t1 | MTR_7g086710 | 24.439 | 401 | 276 | 9 | 90 | 482 | 74 | 455 | 1.65e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066069.t1 | AT1G25500 | 75.926 | 486 | 110 | 3 | 1 | 482 | 1 | 483 | 0.0 | 696 |
| MS.gene066069.t1 | AT1G25500 | 78.729 | 409 | 86 | 1 | 75 | 482 | 17 | 425 | 0.0 | 620 |
| MS.gene066069.t1 | AT1G25500 | 81.188 | 303 | 56 | 1 | 127 | 428 | 1 | 303 | 1.68e-170 | 483 |
| MS.gene066069.t1 | AT5G13760 | 25.000 | 440 | 279 | 11 | 31 | 451 | 126 | 533 | 7.82e-32 | 129 |
| MS.gene066069.t1 | AT3G04440 | 24.500 | 400 | 278 | 11 | 90 | 484 | 63 | 443 | 5.60e-17 | 83.6 |
| MS.gene066069.t1 | AT3G04440 | 24.500 | 400 | 278 | 11 | 90 | 484 | 86 | 466 | 5.68e-17 | 84.0 |
| MS.gene066069.t1 | AT3G03700 | 24.500 | 400 | 278 | 11 | 90 | 484 | 86 | 466 | 5.94e-17 | 84.0 |
Find 124 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGGTTAACCGAAACTTAT+TGG | 0.156204 | 1.4:-84958880 | MS.gene066069:CDS |
| GTGTTTCTTGTTCTTCTTCA+TGG | 0.194172 | 1.4:-84957557 | MS.gene066069:CDS |
| GATTGCACTGGGATTCCTTT+TGG | 0.198367 | 1.4:-84958984 | MS.gene066069:CDS |
| GGTGGAATTGGGACTGTTCT+TGG | 0.249819 | 1.4:-84958839 | MS.gene066069:CDS |
| GTGTTTGGGCGTGGGTTAAA+TGG | 0.262462 | 1.4:-84956452 | MS.gene066069:CDS |
| TATGCGGCTGCTGGTGGAAT+TGG | 0.288454 | 1.4:-84958851 | MS.gene066069:CDS |
| TCCCATCTTTGAATCAATAA+AGG | 0.295109 | 1.4:+84956096 | None:intergenic |
| CTGGAACTTGTGCTGGTGTT+TGG | 0.300120 | 1.4:-84956467 | MS.gene066069:CDS |
| CATGCTCATGGGTATGGTTT+TGG | 0.306935 | 1.4:-84956397 | MS.gene066069:intron |
| TGACTTCGCTTCCGCCATTC+AGG | 0.310826 | 1.4:-84959528 | MS.gene066069:intron |
| CACTTACAGATAGCTGTTAA+TGG | 0.312347 | 1.4:-84956618 | MS.gene066069:intron |
| TGCAGAACCAGCATCGTAAA+TGG | 0.317444 | 1.4:+84957929 | None:intergenic |
| ATGGACTTGGTTGTTGTTGT+TGG | 0.342035 | 1.4:-84958816 | MS.gene066069:CDS |
| CATTATTTACTGCAGCTATC+AGG | 0.343855 | 1.4:-84957442 | MS.gene066069:CDS |
| GGTTAACCCGGCATGATTCC+CGG | 0.344297 | 1.4:+84958892 | None:intergenic |
| TGGATGGCCTTATGGTCATT+TGG | 0.345668 | 1.4:-84957830 | MS.gene066069:CDS |
| CGCCGCCACTTCTCCTGCTC+CGG | 0.349096 | 1.4:+84959089 | None:intergenic |
| TGGGAGTTATTCCAATCAAC+TGG | 0.349178 | 1.4:-84956564 | MS.gene066069:CDS |
| AAGTACACTCCTGGTCTTAC+CGG | 0.351688 | 1.4:-84958911 | MS.gene066069:CDS |
| TCACATCCTCACCACTTATC+TGG | 0.355225 | 1.4:-84958759 | MS.gene066069:CDS |
| TATGCTTTAACAACATCTTT+TGG | 0.365686 | 1.4:-84957482 | MS.gene066069:CDS |
| TGGAACTTGTGCTGGTGTTT+GGG | 0.373882 | 1.4:-84956466 | MS.gene066069:CDS |
| CTTGTGCTGGTGTTTGGGCG+TGG | 0.385820 | 1.4:-84956461 | MS.gene066069:CDS |
| TGATTTCCTCTTTCATCTTG+TGG | 0.389585 | 1.4:-84957249 | MS.gene066069:CDS |
| TGGCCGCTTTATGCGGCTGC+TGG | 0.391745 | 1.4:-84958860 | MS.gene066069:CDS |
| CTTTCATCATTTGAGTAGCC+TGG | 0.393996 | 1.4:+84958789 | None:intergenic |
| ATGCGGCTGCTGGTGGAATT+GGG | 0.395736 | 1.4:-84958850 | MS.gene066069:CDS |
| GGTTGGATTGGCAATGGTTG+TGG | 0.400792 | 1.4:-84956163 | MS.gene066069:CDS |
| TGGTAAAAGCTTCAACAATT+CGG | 0.402401 | 1.4:-84956598 | MS.gene066069:CDS |
| ATACTGCAAAGATTTCATTA+AGG | 0.403891 | 1.4:+84957502 | None:intergenic |
| TGGACTTGGTTGTTGTTGTT+GGG | 0.404889 | 1.4:-84958815 | MS.gene066069:CDS |
| CACATCCATGCTCATGGGTA+TGG | 0.406680 | 1.4:-84956403 | MS.gene066069:CDS |
| ACCCTTTATTGATTCAAAGA+TGG | 0.412790 | 1.4:-84956098 | MS.gene066069:CDS |
| GTTGTTGTTGTTGGGTTCCC+AGG | 0.413364 | 1.4:-84958807 | MS.gene066069:CDS |
| TAACAAATATGCCTATGTTC+AGG | 0.414206 | 1.4:-84957207 | MS.gene066069:intron |
| CCCTTTATTGATTCAAAGAT+GGG | 0.419622 | 1.4:-84956097 | MS.gene066069:CDS |
| GGACTGTTCTTGGATGGACT+TGG | 0.421193 | 1.4:-84958829 | MS.gene066069:CDS |
| AGTGATAGAGTTATTATGAT+TGG | 0.422509 | 1.4:-84956429 | MS.gene066069:CDS |
| CTTGTGGCATATGATTGTTC+AGG | 0.424285 | 1.4:-84956531 | MS.gene066069:CDS |
| GTGCCTCAACCCCAGTTGAT+TGG | 0.426924 | 1.4:+84956553 | None:intergenic |
| AATATAGGAGTGCTCGAGCC+AGG | 0.436736 | 1.4:-84956026 | MS.gene066069:CDS |
| CCGCTTTATGCGGCTGCTGG+TGG | 0.442048 | 1.4:-84958857 | MS.gene066069:CDS |
| TGTGATTCATTTGATTGCAC+TGG | 0.442197 | 1.4:-84958996 | MS.gene066069:CDS |
| ACTGTGCATGTTATAGTGTC+TGG | 0.442564 | 1.4:-84957584 | MS.gene066069:CDS |
| AAAGAGGGAGAATCCATCAT+TGG | 0.446656 | 1.4:+84959566 | None:intergenic |
| CAGACTTCCATTTACGATGC+TGG | 0.447339 | 1.4:-84957936 | MS.gene066069:CDS |
| TGGCGGCGGCAGCAGTGAAA+TGG | 0.448408 | 1.4:-84959074 | MS.gene066069:CDS |
| CCCATCTTTGAATCAATAAA+GGG | 0.449353 | 1.4:+84956097 | None:intergenic |
| TCTTTCAGATACGTGGACTT+AGG | 0.451037 | 1.4:-84957310 | MS.gene066069:intron |
| TTATGGTCATTTGGAGCAGC+AGG | 0.454748 | 1.4:-84957821 | MS.gene066069:CDS |
| TACATCACCGACTTCAATAT+AGG | 0.460955 | 1.4:-84956041 | MS.gene066069:CDS |
| ATAAAGCGGCCAATAAGTTT+CGG | 0.462577 | 1.4:+84958871 | None:intergenic |
| GAATTGGGACTGTTCTTGGA+TGG | 0.462942 | 1.4:-84958835 | MS.gene066069:CDS |
| GATTTCATTAAGGAGTTAGC+AGG | 0.469510 | 1.4:+84957512 | None:intergenic |
| CGGCAGAACAATCGCGGCGG+TGG | 0.470242 | 1.4:-84959045 | MS.gene066069:CDS |
| GCCGCCACTTCTCCTGCTCC+GGG | 0.471009 | 1.4:+84959090 | None:intergenic |
| TTGTGCTGGTGTTTGGGCGT+GGG | 0.472291 | 1.4:-84956460 | MS.gene066069:CDS |
| GGTCTTACCGGGAATCATGC+CGG | 0.474937 | 1.4:-84958899 | MS.gene066069:CDS |
| TGCTGCTCCAAATGACCATA+AGG | 0.477819 | 1.4:+84957823 | None:intergenic |
| GATAGAGTGCATCCCGGAGC+AGG | 0.479116 | 1.4:-84959102 | MS.gene066069:intron |
| AACTTATTGGCCGCTTTATG+CGG | 0.485649 | 1.4:-84958867 | MS.gene066069:CDS |
| CGAGAAAACGCCTCTATATG+AGG | 0.486880 | 1.4:-84955976 | None:intergenic |
| ATTCCAATCAACTGGGGTTG+AGG | 0.495610 | 1.4:-84956556 | MS.gene066069:CDS |
| TGGCTCCACATCCATGCTCA+TGG | 0.509273 | 1.4:-84956409 | MS.gene066069:CDS |
| GTGGCTTCAAACTTGAGTGA+TGG | 0.511129 | 1.4:-84957794 | MS.gene066069:CDS |
| CGTGGACTTAGGTCAAAGAT+TGG | 0.513470 | 1.4:-84957299 | MS.gene066069:CDS |
| ATTTGGAGCAGCAGGTGTTG+TGG | 0.514073 | 1.4:-84957813 | MS.gene066069:CDS |
| TGGCTTCAAACTTGAGTGAT+GGG | 0.514253 | 1.4:-84957793 | MS.gene066069:CDS |
| TTGATAACTGGAACTTGTGC+TGG | 0.515273 | 1.4:-84956474 | MS.gene066069:CDS |
| CACGACACTCTCATGACCTC+GGG | 0.515499 | 1.4:+84957878 | None:intergenic |
| CAGCAGTGAAATGGTGGTGG+CGG | 0.515947 | 1.4:-84959065 | MS.gene066069:CDS |
| ACATGTGAATCCTCATATAG+AGG | 0.516243 | 1.4:+84955966 | None:intergenic |
| AACTGGGGTTGAGGCACTTG+TGG | 0.518075 | 1.4:-84956547 | MS.gene066069:CDS |
| GATGTAGTGTCTCAGACATC+TGG | 0.524115 | 1.4:+84956058 | None:intergenic |
| GGCTCCACATCCATGCTCAT+GGG | 0.527680 | 1.4:-84956408 | MS.gene066069:CDS |
| GGGACGCTGGTGGCTTCTTG+TGG | 0.527891 | 1.4:-84957771 | MS.gene066069:intron |
| CCAATAAGTTTCGGTTAACC+CGG | 0.528188 | 1.4:+84958880 | None:intergenic |
| TTTCATCATTTGAGTAGCCT+GGG | 0.528321 | 1.4:+84958790 | None:intergenic |
| GTCTTACCGGGAATCATGCC+GGG | 0.530497 | 1.4:-84958898 | MS.gene066069:CDS |
| ATGATGATTCATAACCTGAA+TGG | 0.532760 | 1.4:+84959514 | None:intergenic |
| TGGATTGGCAATGGTTGTGG+TGG | 0.533456 | 1.4:-84956160 | MS.gene066069:CDS |
| ATGTTATATCCGTCATAGAC+AGG | 0.534896 | 1.4:-84958652 | MS.gene066069:intron |
| CGGCAGCAGTGAAATGGTGG+TGG | 0.537136 | 1.4:-84959068 | MS.gene066069:CDS |
| AGCGAAGTCAGAGGAAGAAG+AGG | 0.539083 | 1.4:+84959541 | None:intergenic |
| GAGTCTCCACAAGATGAAAG+AGG | 0.544256 | 1.4:+84957243 | None:intergenic |
| AGCTATCAGGACACTGCGAT+GGG | 0.545630 | 1.4:-84957429 | MS.gene066069:CDS |
| CAGCTATCAGGACACTGCGA+TGG | 0.546217 | 1.4:-84957430 | MS.gene066069:CDS |
| CATACCCATGAGCATGGATG+TGG | 0.547051 | 1.4:+84956404 | None:intergenic |
| GTGATTCATTTGATTGCACT+GGG | 0.557586 | 1.4:-84958995 | MS.gene066069:CDS |
| TTTCTCGTATAGGGTCATCA+TGG | 0.563735 | 1.4:+84955992 | None:intergenic |
| AGTACACTCCTGGTCTTACC+GGG | 0.564946 | 1.4:-84958910 | MS.gene066069:CDS |
| ACTTATGACAGCCAGATAAG+TGG | 0.565648 | 1.4:+84958748 | None:intergenic |
| ATCATGGAATCGATAGTCCC+TGG | 0.566285 | 1.4:+84956008 | None:intergenic |
| GCATGATTCCCGGTAAGACC+AGG | 0.566292 | 1.4:+84958902 | None:intergenic |
| CCACCAGCAGCCGCATAAAG+CGG | 0.568080 | 1.4:+84958857 | None:intergenic |
| AACATTGATAAGTACACTCC+TGG | 0.568478 | 1.4:-84958920 | MS.gene066069:CDS |
| CAATTCGGCTAGAGATGCAT+GGG | 0.574864 | 1.4:-84956583 | MS.gene066069:CDS |
| CGGCGGCAGCAGTGAAATGG+TGG | 0.576587 | 1.4:-84959071 | MS.gene066069:CDS |
| TCTTCTTCATGGTGGTAGAG+AGG | 0.577354 | 1.4:-84957546 | MS.gene066069:CDS |
| ATATAGGAGTGCTCGAGCCA+GGG | 0.586115 | 1.4:-84956025 | MS.gene066069:CDS |
| GGGAGTTATTCCAATCAACT+GGG | 0.587121 | 1.4:-84956563 | MS.gene066069:CDS |
| GCATCCCGGAGCAGGAGAAG+TGG | 0.587204 | 1.4:-84959094 | MS.gene066069:CDS |
| ACAATTCGGCTAGAGATGCA+TGG | 0.589439 | 1.4:-84956584 | MS.gene066069:CDS |
| ACAATCTGGTACCTGAACAT+AGG | 0.589676 | 1.4:+84957196 | None:intergenic |
| CTGTGCATGTTATAGTGTCT+GGG | 0.592316 | 1.4:-84957583 | MS.gene066069:CDS |
| CAAAACCATACCCATGAGCA+TGG | 0.598545 | 1.4:+84956398 | None:intergenic |
| CGGAGCAGGAGAAGTGGCGG+CGG | 0.601918 | 1.4:-84959088 | MS.gene066069:CDS |
| ACACGACACTCTCATGACCT+CGG | 0.602868 | 1.4:+84957877 | None:intergenic |
| TATGGTGATAGAGTGCATCC+CGG | 0.611166 | 1.4:-84959108 | MS.gene066069:intron |
| TTTCTTGTTCTTCTTCATGG+TGG | 0.614678 | 1.4:-84957554 | MS.gene066069:CDS |
| GGGCAAATACCTGTCTATGA+CGG | 0.619121 | 1.4:+84958643 | None:intergenic |
| TCCCGGAGCAGGAGAAGTGG+CGG | 0.621772 | 1.4:-84959091 | MS.gene066069:CDS |
| GGCTTCAAACTTGAGTGATG+GGG | 0.633313 | 1.4:-84957792 | MS.gene066069:CDS |
| TATCAGGACACTGCGATGGG+AGG | 0.638311 | 1.4:-84957426 | MS.gene066069:intron |
| GAGCACTCCTATATTGAAGT+CGG | 0.639960 | 1.4:+84956034 | None:intergenic |
| GCATGTTATAGTGTCTGGGA+TGG | 0.645145 | 1.4:-84957579 | MS.gene066069:CDS |
| TGGTGGCGGCAGAACAATCG+CGG | 0.651883 | 1.4:-84959051 | MS.gene066069:CDS |
| ATGATTCATAACCTGAATGG+CGG | 0.655806 | 1.4:+84959517 | None:intergenic |
| TGACAGCCAGATAAGTGGTG+AGG | 0.678207 | 1.4:+84958753 | None:intergenic |
| AATGGCGGAAGCGAAGTCAG+AGG | 0.682812 | 1.4:+84959532 | None:intergenic |
| GATGGTTTGGAATCTTCCCG+AGG | 0.685332 | 1.4:-84957894 | MS.gene066069:CDS |
| GGAGTTATTCCAATCAACTG+GGG | 0.706705 | 1.4:-84956562 | MS.gene066069:CDS |
| GCTTCAAACTTGAGTGATGG+GGG | 0.710727 | 1.4:-84957791 | MS.gene066069:CDS |
| TGGCGGCAGAACAATCGCGG+CGG | 0.757815 | 1.4:-84959048 | MS.gene066069:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACATAAACAAATATTAT+TGG | + | chr1.4:84956083-84956102 | None:intergenic | 10.0% |
| !! | TAACATAAACAAATATTATT+GGG | + | chr1.4:84956082-84956101 | None:intergenic | 10.0% |
| !! | TATAATATTTACAAAAATCA+TGG | + | chr1.4:84959234-84959253 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957333-84957352 | None:intergenic | 100.0% |
| !! | AGTGAATAATATTATTTGAT+CGG | - | chr1.4:84956975-84956994 | MS.gene066069:intron | 15.0% |
| !! | ATATAAAAAAATCAACAATC+TGG | + | chr1.4:84958362-84958381 | None:intergenic | 15.0% |
| !! | GAAGTTAAAATTTCTAAATT+TGG | - | chr1.4:84956402-84956421 | MS.gene066069:CDS | 15.0% |
| !! | GAATAGTCTAATAATTAAAA+AGG | - | chr1.4:84958753-84958772 | MS.gene066069:CDS | 15.0% |
| !! | TATACAAACATAAATGTATT+TGG | + | chr1.4:84958635-84958654 | None:intergenic | 15.0% |
| !!! | TATTGACTTTTATAAATGTT+TGG | + | chr1.4:84957204-84957223 | None:intergenic | 15.0% |
| !!! | TTTTCATTCTAAAAAAACAA+GGG | + | chr1.4:84956136-84956155 | None:intergenic | 15.0% |
| !!! | TTTTTCATTCTAAAAAAACA+AGG | + | chr1.4:84956137-84956156 | None:intergenic | 15.0% |
| !! | AAAGAAAGAAGAAAAAAAAC+GGG | + | chr1.4:84957534-84957553 | None:intergenic | 20.0% |
| !! | AATATTTACAAAAATCATGG+TGG | + | chr1.4:84959231-84959250 | None:intergenic | 20.0% |
| !! | ATATTTACAAAAATCATGGT+GGG | + | chr1.4:84959230-84959249 | None:intergenic | 20.0% |
| !! | GAAAGAAAGAAGAAAAAAAA+CGG | + | chr1.4:84957535-84957554 | None:intergenic | 20.0% |
| !! | TAAACAAATATTATTGGGTA+CGG | + | chr1.4:84956077-84956096 | None:intergenic | 20.0% |
| !! | TTAATATAAGATGATGAAGT+GGG | - | chr1.4:84957249-84957268 | MS.gene066069:CDS | 20.0% |
| !! | TTTAATATAAGATGATGAAG+TGG | - | chr1.4:84957248-84957267 | MS.gene066069:CDS | 20.0% |
| !!! | AAACAGATTTTTATTCGTTT+GGG | - | chr1.4:84956287-84956306 | MS.gene066069:intron | 20.0% |
| !!! | AAATATGTAACTTTGTTTTC+AGG | - | chr1.4:84959357-84959376 | MS.gene066069:intron | 20.0% |
| !!! | ACTACTAAAACTTCAATTTT+GGG | + | chr1.4:84957371-84957390 | None:intergenic | 20.0% |
| !!! | ATAACTTTTTTGCTATTCAA+GGG | + | chr1.4:84956325-84956344 | None:intergenic | 20.0% |
| !!! | ATCATTTTAATTGCTTTATC+TGG | - | chr1.4:84956107-84956126 | MS.gene066069:CDS | 20.0% |
| !!! | CGTTAAACATGATTTTTAAT+AGG | - | chr1.4:84958828-84958847 | MS.gene066069:CDS | 20.0% |
| !!! | GTAAAGTTAGTATTTTTATG+TGG | - | chr1.4:84956162-84956181 | MS.gene066069:CDS | 20.0% |
| !!! | TAAACAGATTTTTATTCGTT+TGG | - | chr1.4:84956286-84956305 | MS.gene066069:intron | 20.0% |
| !!! | TCATTTTAATTGCTTTATCT+GGG | - | chr1.4:84956108-84956127 | MS.gene066069:CDS | 20.0% |
| !!! | TTTATAAATGTTTGGATTAG+CGG | + | chr1.4:84957196-84957215 | None:intergenic | 20.0% |
| ! | AAAGGAGATCAAGAATATAT+AGG | - | chr1.4:84958771-84958790 | MS.gene066069:CDS | 25.0% |
| ! | AACACAAACATATGATTTCA+GGG | + | chr1.4:84956921-84956940 | None:intergenic | 25.0% |
| ! | AATAATGTACTTCTTGATAC+GGG | - | chr1.4:84957220-84957239 | MS.gene066069:CDS | 25.0% |
| ! | AGTGATAGAGTTATTATGAT+TGG | - | chr1.4:84959112-84959131 | MS.gene066069:intron | 25.0% |
| ! | ATACTGCAAAGATTTCATTA+AGG | + | chr1.4:84958042-84958061 | None:intergenic | 25.0% |
| ! | CAAACGTGTTTAAAGATTTA+AGG | + | chr1.4:84959183-84959202 | None:intergenic | 25.0% |
| ! | CAATAATGTACTTCTTGATA+CGG | - | chr1.4:84957219-84957238 | MS.gene066069:CDS | 25.0% |
| ! | CATTGCAACTTGAAATTTAT+TGG | + | chr1.4:84957079-84957098 | None:intergenic | 25.0% |
| ! | GTTTAAAGATTTAAGGAGAT+TGG | + | chr1.4:84959176-84959195 | None:intergenic | 25.0% |
| ! | TATTCACTCTAACATATTCA+GGG | + | chr1.4:84956963-84956982 | None:intergenic | 25.0% |
| ! | TCATTCTGTATGTTCTTATT+TGG | - | chr1.4:84957814-84957833 | MS.gene066069:CDS | 25.0% |
| ! | TTATTACATTTCATGCTTAC+AGG | - | chr1.4:84957890-84957909 | MS.gene066069:CDS | 25.0% |
| ! | TTATTCACTCTAACATATTC+AGG | + | chr1.4:84956964-84956983 | None:intergenic | 25.0% |
| !! | AACAGATTTTTATTCGTTTG+GGG | - | chr1.4:84956288-84956307 | MS.gene066069:intron | 25.0% |
| !! | CTACTAAAACTTCAATTTTG+GGG | + | chr1.4:84957370-84957389 | None:intergenic | 25.0% |
| !! | GACTACTAAAACTTCAATTT+TGG | + | chr1.4:84957372-84957391 | None:intergenic | 25.0% |
| !! | TACTAAAACTTCAATTTTGG+GGG | + | chr1.4:84957369-84957388 | None:intergenic | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | - | chr1.4:84958059-84958078 | MS.gene066069:intron | 25.0% |
| !! | TTAATGCATGTTTGAAATCA+CGG | + | chr1.4:84959305-84959324 | None:intergenic | 25.0% |
| !! | TTTCACTCTTTTTCTCTATT+GGG | - | chr1.4:84956050-84956069 | MS.gene066069:CDS | 25.0% |
| !! | TTTTCACTCTTTTTCTCTAT+TGG | - | chr1.4:84956049-84956068 | MS.gene066069:CDS | 25.0% |
| !! | TTTTCTCTGTAAGCTTATTT+TGG | - | chr1.4:84957913-84957932 | MS.gene066069:CDS | 25.0% |
| !!! | AAATTTCAAGTTGCAATGTT+TGG | - | chr1.4:84957081-84957100 | MS.gene066069:intron | 25.0% |
| !!! | ATTTTGTGTTCTAAAAGAAC+AGG | + | chr1.4:84957037-84957056 | None:intergenic | 25.0% |
| !!! | CTAAATTTGGTTGCTTTTTA+TGG | - | chr1.4:84956415-84956434 | MS.gene066069:CDS | 25.0% |
| !!! | GATAACTTTTTTGCTATTCA+AGG | + | chr1.4:84956326-84956345 | None:intergenic | 25.0% |
| !!! | TCTTTTATTTTTGTCTACGA+TGG | - | chr1.4:84957553-84957572 | MS.gene066069:CDS | 25.0% |
| !!! | TTTTGTGTTCTAAAAGAACA+GGG | + | chr1.4:84957036-84957055 | None:intergenic | 25.0% |
| AAACTTACACAACAATGACA+TGG | - | chr1.4:84958882-84958901 | MS.gene066069:CDS | 30.0% | |
| ACTACTGATAATTACTGAGA+AGG | - | chr1.4:84958388-84958407 | MS.gene066069:intron | 30.0% | |
| AGGAATGTGTAAGAATTTGT+CGG | - | chr1.4:84958408-84958427 | MS.gene066069:intron | 30.0% | |
| AGTTATCAATCCACCAAAAA+TGG | + | chr1.4:84959056-84959075 | None:intergenic | 30.0% | |
| ATGATGATTCATAACCTGAA+TGG | + | chr1.4:84956030-84956049 | None:intergenic | 30.0% | |
| ATGTTTGTATAGTCAGTTGT+AGG | - | chr1.4:84958644-84958663 | MS.gene066069:intron | 30.0% | |
| CAACACAAACATATGATTTC+AGG | + | chr1.4:84956922-84956941 | None:intergenic | 30.0% | |
| CCCATCTTTGAATCAATAAA+GGG | + | chr1.4:84959447-84959466 | None:intergenic | 30.0% | |
| CCTTAATAAAGAGAGTAGAT+CGG | - | chr1.4:84958725-84958744 | MS.gene066069:CDS | 30.0% | |
| CTGAAATCATATGTTTGTGT+TGG | - | chr1.4:84956920-84956939 | MS.gene066069:intron | 30.0% | |
| GTGTAAGTTTACCAATTACA+CGG | + | chr1.4:84958872-84958891 | None:intergenic | 30.0% | |
| TAACAAATATGCCTATGTTC+AGG | - | chr1.4:84958334-84958353 | MS.gene066069:intron | 30.0% | |
| TCCCATCTTTGAATCAATAA+AGG | + | chr1.4:84959448-84959467 | None:intergenic | 30.0% | |
| TCTATGTTTACTGCATCAAA+TGG | - | chr1.4:84957279-84957298 | MS.gene066069:CDS | 30.0% | |
| TGGTAAAAGCTTCAACAATT+CGG | - | chr1.4:84958943-84958962 | MS.gene066069:CDS | 30.0% | |
| TTCCTTACTCCTTACTATAA+AGG | - | chr1.4:84958484-84958503 | MS.gene066069:intron | 30.0% | |
| ! | ACTAAAACTTCAATTTTGGG+GGG | + | chr1.4:84957368-84957387 | None:intergenic | 30.0% |
| ! | CTCTTTATTAAGGCTTTTAC+AGG | + | chr1.4:84958718-84958737 | None:intergenic | 30.0% |
| ! | TCATAAGTGTTTTGTGTTTC+TGG | - | chr1.4:84956808-84956827 | MS.gene066069:intron | 30.0% |
| !! | AATCTCACCTAAGTTGATTT+GGG | - | chr1.4:84958677-84958696 | MS.gene066069:CDS | 30.0% |
| !! | ACCCTTTATTGATTCAAAGA+TGG | - | chr1.4:84959443-84959462 | MS.gene066069:intron | 30.0% |
| !! | CCCTTTATTGATTCAAAGAT+GGG | - | chr1.4:84959444-84959463 | MS.gene066069:intron | 30.0% |
| !! | TCTTTTGGTAGCATTTGTTA+TGG | - | chr1.4:84958074-84958093 | MS.gene066069:intron | 30.0% |
| !! | TTTGCTATTCAAGGGAAATT+GGG | + | chr1.4:84956317-84956336 | None:intergenic | 30.0% |
| !!! | ATGTAACTTTGTTTTCAGGT+TGG | - | chr1.4:84959361-84959380 | MS.gene066069:intron | 30.0% |
| !!! | ATTTTTGGTGGATTGATAAC+TGG | - | chr1.4:84959055-84959074 | MS.gene066069:CDS | 30.0% |
| !!! | TTTTGCTATTCAAGGGAAAT+TGG | + | chr1.4:84956318-84956337 | None:intergenic | 30.0% |
| AAAAAGCTGTGAAGATGGTT+TGG | - | chr1.4:84957634-84957653 | MS.gene066069:intron | 35.0% | |
| AACATTGATAAGTACACTCC+TGG | - | chr1.4:84956621-84956640 | MS.gene066069:intron | 35.0% | |
| AATTTGTCGGGTAAAGTTCT+TGG | - | chr1.4:84958421-84958440 | MS.gene066069:intron | 35.0% | |
| ACAACTCATTTGCTTTCCAT+AGG | + | chr1.4:84958581-84958600 | None:intergenic | 35.0% | |
| ACAGTACCTCCTTTATAGTA+AGG | + | chr1.4:84958496-84958515 | None:intergenic | 35.0% | |
| ACGGAAATGCAAATAAACAG+CGG | - | chr1.4:84957400-84957419 | MS.gene066069:intron | 35.0% | |
| AGTTTGTAGATGAATGTTGC+AGG | - | chr1.4:84957479-84957498 | MS.gene066069:CDS | 35.0% | |
| ATAAAGCGGCCAATAAGTTT+CGG | + | chr1.4:84956673-84956692 | None:intergenic | 35.0% | |
| ATGATTCATAACCTGAATGG+CGG | + | chr1.4:84956027-84956046 | None:intergenic | 35.0% | |
| ATGTTATATCCGTCATAGAC+AGG | - | chr1.4:84956889-84956908 | MS.gene066069:intron | 35.0% | |
| CACAACAATGACATGGTTAA+TGG | - | chr1.4:84958889-84958908 | MS.gene066069:CDS | 35.0% | |
| CACTTACAGATAGCTGTTAA+TGG | - | chr1.4:84958923-84958942 | MS.gene066069:CDS | 35.0% | |
| CATTATTTACTGCAGCTATC+AGG | - | chr1.4:84958099-84958118 | MS.gene066069:intron | 35.0% | |
| CCGATCTACTCTCTTTATTA+AGG | + | chr1.4:84958728-84958747 | None:intergenic | 35.0% | |
| CTCCTTTATAGTAAGGAGTA+AGG | + | chr1.4:84958489-84958508 | None:intergenic | 35.0% | |
| CTGTTTATTTGCATTTCCGT+TGG | + | chr1.4:84957400-84957419 | None:intergenic | 35.0% | |
| CTTACTCCTTACTATAAAGG+AGG | - | chr1.4:84958487-84958506 | MS.gene066069:intron | 35.0% | |
| GAAACCAAGCCACAAAAATT+AGG | + | chr1.4:84957507-84957526 | None:intergenic | 35.0% | |
| GATTTCATTAAGGAGTTAGC+AGG | + | chr1.4:84958032-84958051 | None:intergenic | 35.0% | |
| GGAATGTGTAAGAATTTGTC+GGG | - | chr1.4:84958409-84958428 | MS.gene066069:intron | 35.0% | |
| GTGATTCATTTGATTGCACT+GGG | - | chr1.4:84956546-84956565 | MS.gene066069:CDS | 35.0% | |
| GTGTTTCTTGTTCTTCTTCA+TGG | - | chr1.4:84957984-84958003 | MS.gene066069:intron | 35.0% | |
| TATTGCATGATCCGTGTAAT+TGG | - | chr1.4:84958858-84958877 | MS.gene066069:CDS | 35.0% | |
| TGATTTCCTCTTTCATCTTG+TGG | - | chr1.4:84958292-84958311 | MS.gene066069:intron | 35.0% | |
| TGTGATTCATTTGATTGCAC+TGG | - | chr1.4:84956545-84956564 | MS.gene066069:CDS | 35.0% | |
| TGTGGAAAATACGAGTTAAG+TGG | - | chr1.4:84958513-84958532 | MS.gene066069:intron | 35.0% | |
| TTACACGGATCATGCAATAT+CGG | + | chr1.4:84958857-84958876 | None:intergenic | 35.0% | |
| TTTCATCATTTGAGTAGCCT+GGG | + | chr1.4:84956754-84956773 | None:intergenic | 35.0% | |
| TTTCTTGTTCTTCTTCATGG+TGG | - | chr1.4:84957987-84958006 | MS.gene066069:intron | 35.0% | |
| ! | ATGAGAAAGTATGCATAGAG+CGG | + | chr1.4:84957452-84957471 | None:intergenic | 35.0% |
| ! | CTGTATGTTCTTATTTGGAC+TGG | - | chr1.4:84957819-84957838 | MS.gene066069:CDS | 35.0% |
| ! | TCAAGTTGCAATGTTTGGAT+TGG | - | chr1.4:84957086-84957105 | MS.gene066069:intron | 35.0% |
| ! | TTGCAGGTTCCTAATTTTTG+TGG | - | chr1.4:84957495-84957514 | MS.gene066069:CDS | 35.0% |
| !! | CTAAAACTTCAATTTTGGGG+GGG | + | chr1.4:84957367-84957386 | None:intergenic | 35.0% |
| !! | GAATCTCACCTAAGTTGATT+TGG | - | chr1.4:84958676-84958695 | MS.gene066069:CDS | 35.0% |
| !! | GTTCTTATTTGGACTGGTTA+TGG | - | chr1.4:84957825-84957844 | MS.gene066069:CDS | 35.0% |
| !! | TAAAACTTCAATTTTGGGGG+GGG | + | chr1.4:84957366-84957385 | None:intergenic | 35.0% |
| !! | TACATCACCGACTTCAATAT+AGG | - | chr1.4:84959500-84959519 | MS.gene066069:intron | 35.0% |
| !! | TCGTTTTTCTTTCAGATACG+TGG | - | chr1.4:84958224-84958243 | MS.gene066069:intron | 35.0% |
| !! | TTACTATAAAGGAGGTACTG+TGG | - | chr1.4:84958495-84958514 | MS.gene066069:intron | 35.0% |
| !!! | ACTTTGTTTTCAGGTTGGAT+TGG | - | chr1.4:84959366-84959385 | MS.gene066069:intron | 35.0% |
| !!! | TCATGTTTGCTGTGCTTTTA+TGG | - | chr1.4:84957691-84957710 | MS.gene066069:intron | 35.0% |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | - | chr1.4:84957918-84957937 | MS.gene066069:CDS | 35.0% |
| AATAACAGCGTCATCAGATG+AGG | + | chr1.4:84957875-84957894 | None:intergenic | 40.0% | |
| ACAATCTGGTACCTGAACAT+AGG | + | chr1.4:84958348-84958367 | None:intergenic | 40.0% | |
| ACACAAGCCCAAATCAACTT+AGG | + | chr1.4:84958687-84958706 | None:intergenic | 40.0% | |
| ACTGTGCATGTTATAGTGTC+TGG | - | chr1.4:84957957-84957976 | MS.gene066069:intron | 40.0% | |
| ACTTATGACAGCCAGATAAG+TGG | + | chr1.4:84956796-84956815 | None:intergenic | 40.0% | |
| AGAAAAGAAGCCATGAGGAT+TGG | + | chr1.4:84957581-84957600 | None:intergenic | 40.0% | |
| AGAGGAAGAAGAGGAAAAAG+AGG | + | chr1.4:84955994-84956013 | None:intergenic | 40.0% | |
| ATGACTTCAAGTGCTACCTA+TGG | - | chr1.4:84958562-84958581 | MS.gene066069:intron | 40.0% | |
| CCAATAAGTTTCGGTTAACC+CGG | + | chr1.4:84956664-84956683 | None:intergenic | 40.0% | |
| CGGCGAGATTGATAGAATTA+TGG | - | chr1.4:84957109-84957128 | MS.gene066069:intron | 40.0% | |
| CTGTGCATGTTATAGTGTCT+GGG | - | chr1.4:84957958-84957977 | MS.gene066069:intron | 40.0% | |
| CTTCAACGAAATCAGTGTCA+CGG | - | chr1.4:84959262-84959281 | MS.gene066069:intron | 40.0% | |
| CTTGTGGCATATGATTGTTC+AGG | - | chr1.4:84959010-84959029 | MS.gene066069:CDS | 40.0% | |
| CTTTCATCATTTGAGTAGCC+TGG | + | chr1.4:84956755-84956774 | None:intergenic | 40.0% | |
| GAGCACTCCTATATTGAAGT+CGG | + | chr1.4:84959510-84959529 | None:intergenic | 40.0% | |
| GAGGAAGAAGAGGAAAAAGA+GGG | + | chr1.4:84955993-84956012 | None:intergenic | 40.0% | |
| GGAATACACCCAAGTGAAAA+TGG | + | chr1.4:84958468-84958487 | None:intergenic | 40.0% | |
| GGAGTTATTCCAATCAACTG+GGG | - | chr1.4:84958979-84958998 | MS.gene066069:CDS | 40.0% | |
| GGGAGTTATTCCAATCAACT+GGG | - | chr1.4:84958978-84958997 | MS.gene066069:CDS | 40.0% | |
| GTGGTTGTTGAGACTAATTG+AGG | - | chr1.4:84958532-84958551 | MS.gene066069:intron | 40.0% | |
| GTTCTTGGCAGCATCATATT+TGG | - | chr1.4:84958436-84958455 | MS.gene066069:intron | 40.0% | |
| TCTGCAAAAAGCTGTGAAGA+TGG | - | chr1.4:84957629-84957648 | MS.gene066069:CDS | 40.0% | |
| TCTTTCAGATACGTGGACTT+AGG | - | chr1.4:84958231-84958250 | MS.gene066069:intron | 40.0% | |
| TGGCTTCAAACTTGAGTGAT+GGG | - | chr1.4:84957748-84957767 | MS.gene066069:intron | 40.0% | |
| TGGGAGTTATTCCAATCAAC+TGG | - | chr1.4:84958977-84958996 | MS.gene066069:CDS | 40.0% | |
| TTATTTGCATTTCCGTTGGC+AGG | + | chr1.4:84957396-84957415 | None:intergenic | 40.0% | |
| TTCTGACTCTTCAAGAAACC+AGG | + | chr1.4:84956380-84956399 | None:intergenic | 40.0% | |
| TTTCTCGTATAGGGTCATCA+TGG | + | chr1.4:84959552-84959571 | None:intergenic | 40.0% | |
| ! | AACTTATTGGCCGCTTTATG+CGG | - | chr1.4:84956674-84956693 | MS.gene066069:intron | 40.0% |
| ! | AGTTGCAATGTTTGGATTGG+CGG | - | chr1.4:84957089-84957108 | MS.gene066069:intron | 40.0% |
| ! | ATGGACTTGGTTGTTGTTGT+TGG | - | chr1.4:84956725-84956744 | MS.gene066069:intron | 40.0% |
| ! | ATTGCACTGGGATTCCTTTT+GGG | - | chr1.4:84956558-84956577 | MS.gene066069:CDS | 40.0% |
| ! | CTGGACTAACCAGATTTTCT+GGG | - | chr1.4:84956827-84956846 | MS.gene066069:intron | 40.0% |
| ! | GCGGTTAGTTCAGTTTCTTA+AGG | - | chr1.4:84957419-84957438 | MS.gene066069:intron | 40.0% |
| ! | GGTTCCTAATTTTTGTGGCT+TGG | - | chr1.4:84957500-84957519 | MS.gene066069:CDS | 40.0% |
| ! | TCTGGACTAACCAGATTTTC+TGG | - | chr1.4:84956826-84956845 | MS.gene066069:intron | 40.0% |
| ! | TGAGAAAGTATGCATAGAGC+GGG | + | chr1.4:84957451-84957470 | None:intergenic | 40.0% |
| ! | TGGACTAACCAGATTTTCTG+GGG | - | chr1.4:84956828-84956847 | MS.gene066069:intron | 40.0% |
| ! | TGGACTTGGTTGTTGTTGTT+GGG | - | chr1.4:84956726-84956745 | MS.gene066069:intron | 40.0% |
| ! | TTGATAACTGGAACTTGTGC+TGG | - | chr1.4:84959067-84959086 | MS.gene066069:CDS | 40.0% |
| ! | TTTTAGTAGTCTCCTGCCAA+CGG | - | chr1.4:84957381-84957400 | MS.gene066069:intron | 40.0% |
| !! | AAAACTTCAATTTTGGGGGG+GGG | + | chr1.4:84957365-84957384 | None:intergenic | 40.0% |
| !! | AAGTTGATTTGGGCTTGTGT+GGG | - | chr1.4:84958687-84958706 | MS.gene066069:CDS | 40.0% |
| !! | GGTTTCAGCCATTTTCACTT+GGG | - | chr1.4:84958457-84958476 | MS.gene066069:intron | 40.0% |
| !! | GTCATTGACTTTCTTTGACC+TGG | - | chr1.4:84956359-84956378 | MS.gene066069:intron | 40.0% |
| !! | TAAGTTGATTTGGGCTTGTG+TGG | - | chr1.4:84958686-84958705 | MS.gene066069:CDS | 40.0% |
| !! | TGCTTTTATGGATGGCCTTA+TGG | - | chr1.4:84957703-84957722 | MS.gene066069:intron | 40.0% |
| !! | TGGTTTCAGCCATTTTCACT+TGG | - | chr1.4:84958456-84958475 | MS.gene066069:intron | 40.0% |
| !! | TTGCTAATGGGCACCATTTT+TGG | - | chr1.4:84959040-84959059 | MS.gene066069:CDS | 40.0% |
| !!! | ATAGAGGCGTTTTCTCGTAT+AGG | + | chr1.4:84959562-84959581 | None:intergenic | 40.0% |
| !!! | GTTTGCTGTGCTTTTATGGA+TGG | - | chr1.4:84957695-84957714 | MS.gene066069:intron | 40.0% |
| !!! | TAGAGGCGTTTTCTCGTATA+GGG | + | chr1.4:84959561-84959580 | None:intergenic | 40.0% |
| !!! | TCAGGTGCTGTTTTGCTAAT+GGG | - | chr1.4:84959028-84959047 | MS.gene066069:CDS | 40.0% |
| !!! | TGGCATGATGTTTTCTGGTT+AGG | - | chr1.4:84956516-84956535 | MS.gene066069:CDS | 40.0% |
| !!! | TTCAGGTGCTGTTTTGCTAA+TGG | - | chr1.4:84959027-84959046 | MS.gene066069:CDS | 40.0% |
| !!! | TTTTCAGGTTGGATTGGCAA+TGG | - | chr1.4:84959372-84959391 | MS.gene066069:intron | 40.0% |
| ACAATTCGGCTAGAGATGCA+TGG | - | chr1.4:84958957-84958976 | MS.gene066069:CDS | 45.0% | |
| ATCATGGAATCGATAGTCCC+TGG | + | chr1.4:84959536-84959555 | None:intergenic | 45.0% | |
| ATTCCAATCAACTGGGGTTG+AGG | - | chr1.4:84958985-84959004 | MS.gene066069:CDS | 45.0% | |
| CAAAACCATACCCATGAGCA+TGG | + | chr1.4:84959146-84959165 | None:intergenic | 45.0% | |
| CAATTCGGCTAGAGATGCAT+GGG | - | chr1.4:84958958-84958977 | MS.gene066069:CDS | 45.0% | |
| CAGACTTCCATTTACGATGC+TGG | - | chr1.4:84957605-84957624 | MS.gene066069:CDS | 45.0% | |
| CAGCATCGTAAATGGAAGTC+TGG | + | chr1.4:84957607-84957626 | None:intergenic | 45.0% | |
| CCGGGTTAACCGAAACTTAT+TGG | - | chr1.4:84956661-84956680 | MS.gene066069:intron | 45.0% | |
| CGTGGACTTAGGTCAAAGAT+TGG | - | chr1.4:84958242-84958261 | MS.gene066069:intron | 45.0% | |
| GAATTGGGACTGTTCTTGGA+TGG | - | chr1.4:84956706-84956725 | MS.gene066069:intron | 45.0% | |
| GAGTCTCCACAAGATGAAAG+AGG | + | chr1.4:84958301-84958320 | None:intergenic | 45.0% | |
| GATGTAGTGTCTCAGACATC+TGG | + | chr1.4:84959486-84959505 | None:intergenic | 45.0% | |
| GCATGTTATAGTGTCTGGGA+TGG | - | chr1.4:84957962-84957981 | MS.gene066069:intron | 45.0% | |
| GCTTCAAACTTGAGTGATGG+GGG | - | chr1.4:84957750-84957769 | MS.gene066069:intron | 45.0% | |
| GGAGAAGAAAAGAAGCCATG+AGG | + | chr1.4:84957586-84957605 | None:intergenic | 45.0% | |
| GGCTTCAAACTTGAGTGATG+GGG | - | chr1.4:84957749-84957768 | MS.gene066069:intron | 45.0% | |
| GGGCAAATACCTGTCTATGA+CGG | + | chr1.4:84956901-84956920 | None:intergenic | 45.0% | |
| GTGGCTTCAAACTTGAGTGA+TGG | - | chr1.4:84957747-84957766 | MS.gene066069:intron | 45.0% | |
| TACGATGGTTCCAATCCTCA+TGG | - | chr1.4:84957568-84957587 | MS.gene066069:CDS | 45.0% | |
| TATGGTGATAGAGTGCATCC+CGG | - | chr1.4:84956433-84956452 | MS.gene066069:CDS | 45.0% | |
| TCACATCCTCACCACTTATC+TGG | - | chr1.4:84956782-84956801 | MS.gene066069:intron | 45.0% | |
| TCTTCTTCATGGTGGTAGAG+AGG | - | chr1.4:84957995-84958014 | MS.gene066069:intron | 45.0% | |
| TGCAGAACCAGCATCGTAAA+TGG | + | chr1.4:84957615-84957634 | None:intergenic | 45.0% | |
| TGCTGCTCCAAATGACCATA+AGG | + | chr1.4:84957721-84957740 | None:intergenic | 45.0% | |
| TGTTGGATTGCAGAAGCGAT+TGG | - | chr1.4:84956937-84956956 | MS.gene066069:intron | 45.0% | |
| ! | CATGCTCATGGGTATGGTTT+TGG | - | chr1.4:84959144-84959163 | MS.gene066069:intron | 45.0% |
| ! | GACTAACCAGATTTTCTGGG+GGG | - | chr1.4:84956830-84956849 | MS.gene066069:intron | 45.0% |
| ! | GATTGCACTGGGATTCCTTT+TGG | - | chr1.4:84956557-84956576 | MS.gene066069:CDS | 45.0% |
| ! | GGACTAACCAGATTTTCTGG+GGG | - | chr1.4:84956829-84956848 | MS.gene066069:intron | 45.0% |
| ! | TGGAACTTGTGCTGGTGTTT+GGG | - | chr1.4:84959075-84959094 | MS.gene066069:CDS | 45.0% |
| ! | TTATGGTCATTTGGAGCAGC+AGG | - | chr1.4:84957720-84957739 | MS.gene066069:intron | 45.0% |
| ! | TTGCACTGGGATTCCTTTTG+GGG | - | chr1.4:84956559-84956578 | MS.gene066069:CDS | 45.0% |
| !! | AAACTTCAATTTTGGGGGGG+GGG | + | chr1.4:84957364-84957383 | None:intergenic | 45.0% |
| !! | AAGTACACTCCTGGTCTTAC+CGG | - | chr1.4:84956630-84956649 | MS.gene066069:intron | 45.0% |
| !! | CTAATGGGCACCATTTTTGG+TGG | - | chr1.4:84959043-84959062 | MS.gene066069:CDS | 45.0% |
| !! | GTTTGGATTAGCGGTGAGTT+TGG | + | chr1.4:84957187-84957206 | None:intergenic | 45.0% |
| !! | TGGATGGCCTTATGGTCATT+TGG | - | chr1.4:84957711-84957730 | MS.gene066069:intron | 45.0% |
| !!! | TATTAAAATTTAGATTTTAA+TGG | - | chr1.4:84958800-84958819 | MS.gene066069:CDS | 5.0% |
| AAGCAACCCCCCAGAAAATC+TGG | + | chr1.4:84956839-84956858 | None:intergenic | 50.0% | |
| ACACGACACTCTCATGACCT+CGG | + | chr1.4:84957667-84957686 | None:intergenic | 50.0% | |
| AGCGAAGTCAGAGGAAGAAG+AGG | + | chr1.4:84956003-84956022 | None:intergenic | 50.0% | |
| AGCTATCAGGACACTGCGAT+GGG | - | chr1.4:84958112-84958131 | MS.gene066069:intron | 50.0% | |
| CACATCCATGCTCATGGGTA+TGG | - | chr1.4:84959138-84959157 | MS.gene066069:intron | 50.0% | |
| CACGCAGTGAAGTGATGAGA+AGG | + | chr1.4:84956203-84956222 | None:intergenic | 50.0% | |
| CATACCCATGAGCATGGATG+TGG | + | chr1.4:84959140-84959159 | None:intergenic | 50.0% | |
| GGTGGAATTGGGACTGTTCT+TGG | - | chr1.4:84956702-84956721 | MS.gene066069:intron | 50.0% | |
| TGACAGCCAGATAAGTGGTG+AGG | + | chr1.4:84956791-84956810 | None:intergenic | 50.0% | |
| TGAGACCAAGAACCCCCAAA+AGG | + | chr1.4:84956575-84956594 | None:intergenic | 50.0% | |
| TGGGGGTTCTTGGTCTCAAT+AGG | - | chr1.4:84956577-84956596 | MS.gene066069:CDS | 50.0% | |
| ! | ATTTGGAGCAGCAGGTGTTG+TGG | - | chr1.4:84957728-84957747 | MS.gene066069:intron | 50.0% |
| ! | CTGGAACTTGTGCTGGTGTT+TGG | - | chr1.4:84959074-84959093 | MS.gene066069:CDS | 50.0% |
| ! | GATGGTTTGGAATCTTCCCG+AGG | - | chr1.4:84957647-84957666 | MS.gene066069:intron | 50.0% |
| ! | GGACTGTTCTTGGATGGACT+TGG | - | chr1.4:84956712-84956731 | MS.gene066069:intron | 50.0% |
| ! | GTGTTTGGGCGTGGGTTAAA+TGG | - | chr1.4:84959089-84959108 | MS.gene066069:CDS | 50.0% |
| ! | GTTGTTGTTGTTGGGTTCCC+AGG | - | chr1.4:84956734-84956753 | MS.gene066069:intron | 50.0% |
| ! | TGCACTGGGATTCCTTTTGG+GGG | - | chr1.4:84956560-84956579 | MS.gene066069:CDS | 50.0% |
| !! | AACTTCAATTTTGGGGGGGG+GGG | + | chr1.4:84957363-84957382 | None:intergenic | 50.0% |
| !! | AATATAGGAGTGCTCGAGCC+AGG | - | chr1.4:84959515-84959534 | MS.gene066069:intron | 50.0% |
| !! | AGTACACTCCTGGTCTTACC+GGG | - | chr1.4:84956631-84956650 | MS.gene066069:intron | 50.0% |
| !! | ATATAGGAGTGCTCGAGCCA+GGG | - | chr1.4:84959516-84959535 | MS.gene066069:intron | 50.0% |
| !! | GGATTCCTTTTGGGGGTTCT+TGG | - | chr1.4:84956567-84956586 | MS.gene066069:CDS | 50.0% |
| !! | GGTTGGATTGGCAATGGTTG+TGG | - | chr1.4:84959378-84959397 | MS.gene066069:intron | 50.0% |
| !! | TGGATTGGCAATGGTTGTGG+TGG | - | chr1.4:84959381-84959400 | MS.gene066069:intron | 50.0% |
| ATGCGGCTGCTGGTGGAATT+GGG | - | chr1.4:84956691-84956710 | MS.gene066069:intron | 55.0% | |
| CACGACACTCTCATGACCTC+GGG | + | chr1.4:84957666-84957685 | None:intergenic | 55.0% | |
| CAGCTATCAGGACACTGCGA+TGG | - | chr1.4:84958111-84958130 | MS.gene066069:intron | 55.0% | |
| GCATGATTCCCGGTAAGACC+AGG | + | chr1.4:84956642-84956661 | None:intergenic | 55.0% | |
| GGCTCCACATCCATGCTCAT+GGG | - | chr1.4:84959133-84959152 | MS.gene066069:intron | 55.0% | |
| GGTCTTACCGGGAATCATGC+CGG | - | chr1.4:84956642-84956661 | MS.gene066069:intron | 55.0% | |
| GGTTAACCCGGCATGATTCC+CGG | + | chr1.4:84956652-84956671 | None:intergenic | 55.0% | |
| GTCTTACCGGGAATCATGCC+GGG | - | chr1.4:84956643-84956662 | MS.gene066069:intron | 55.0% | |
| GTGCCTCAACCCCAGTTGAT+TGG | + | chr1.4:84958991-84959010 | None:intergenic | 55.0% | |
| TATCAGGACACTGCGATGGG+AGG | - | chr1.4:84958115-84958134 | MS.gene066069:intron | 55.0% | |
| TATGCGGCTGCTGGTGGAAT+TGG | - | chr1.4:84956690-84956709 | MS.gene066069:intron | 55.0% | |
| TGACTTCGCTTCCGCCATTC+AGG | - | chr1.4:84956013-84956032 | MS.gene066069:CDS | 55.0% | |
| TGGCTCCACATCCATGCTCA+TGG | - | chr1.4:84959132-84959151 | MS.gene066069:intron | 55.0% | |
| ! | AACTGGGGTTGAGGCACTTG+TGG | - | chr1.4:84958994-84959013 | MS.gene066069:CDS | 55.0% |
| ! | AATGGCGGAAGCGAAGTCAG+AGG | + | chr1.4:84956012-84956031 | None:intergenic | 55.0% |
| ! | GGCGGTGGCATGATGTTTTC+TGG | - | chr1.4:84956511-84956530 | MS.gene066069:CDS | 55.0% |
| ! | TTGTGCTGGTGTTTGGGCGT+GGG | - | chr1.4:84959081-84959100 | MS.gene066069:CDS | 55.0% |
| !! | ACTTCAATTTTGGGGGGGGG+GGG | + | chr1.4:84957362-84957381 | None:intergenic | 55.0% |
| !! | CAGCAGTGAAATGGTGGTGG+CGG | - | chr1.4:84956476-84956495 | MS.gene066069:CDS | 55.0% |
| CCACCAGCAGCCGCATAAAG+CGG | + | chr1.4:84956687-84956706 | None:intergenic | 60.0% | |
| CGGCAGCAGTGAAATGGTGG+TGG | - | chr1.4:84956473-84956492 | MS.gene066069:CDS | 60.0% | |
| GATAGAGTGCATCCCGGAGC+AGG | - | chr1.4:84956439-84956458 | MS.gene066069:CDS | 60.0% | |
| GCTGGTGGCTTCTTGTGGTG+AGG | - | chr1.4:84957775-84957794 | MS.gene066069:CDS | 60.0% | |
| GGTGGCTTCTTGTGGTGAGG+TGG | - | chr1.4:84957778-84957797 | MS.gene066069:CDS | 60.0% | |
| ! | ACTTGAGTGATGGGGGACGC+TGG | - | chr1.4:84957757-84957776 | MS.gene066069:intron | 60.0% |
| ! | CTTGTGCTGGTGTTTGGGCG+TGG | - | chr1.4:84959080-84959099 | MS.gene066069:CDS | 60.0% |
| ! | TGGGGGGTTGCTTTCGCTGT+TGG | - | chr1.4:84956846-84956865 | MS.gene066069:intron | 60.0% |
| !! | CTTCAATTTTGGGGGGGGGG+GGG | + | chr1.4:84957361-84957380 | None:intergenic | 60.0% |
| !! | TGGTGGCGGCAGAACAATCG+CGG | - | chr1.4:84956490-84956509 | MS.gene066069:CDS | 60.0% |
| !! | TTCAATTTTGGGGGGGGGGG+GGG | + | chr1.4:84957360-84957379 | None:intergenic | 60.0% |
| CCGCTTTATGCGGCTGCTGG+TGG | - | chr1.4:84956684-84956703 | MS.gene066069:intron | 65.0% | |
| CGGCGGCAGCAGTGAAATGG+TGG | - | chr1.4:84956470-84956489 | MS.gene066069:CDS | 65.0% | |
| GCATCCCGGAGCAGGAGAAG+TGG | - | chr1.4:84956447-84956466 | MS.gene066069:CDS | 65.0% | |
| GGGACGCTGGTGGCTTCTTG+TGG | - | chr1.4:84957770-84957789 | MS.gene066069:intron | 65.0% | |
| TCCCGGAGCAGGAGAAGTGG+CGG | - | chr1.4:84956450-84956469 | MS.gene066069:CDS | 65.0% | |
| TGGCGGCAGAACAATCGCGG+CGG | - | chr1.4:84956493-84956512 | MS.gene066069:CDS | 65.0% | |
| TGGCGGCGGCAGCAGTGAAA+TGG | - | chr1.4:84956467-84956486 | MS.gene066069:CDS | 65.0% | |
| ! | TGAGTGATGGGGGACGCTGG+TGG | - | chr1.4:84957760-84957779 | MS.gene066069:intron | 65.0% |
| ! | TGGCCGCTTTATGCGGCTGC+TGG | - | chr1.4:84956681-84956700 | MS.gene066069:intron | 65.0% |
| !! | TCAATTTTGGGGGGGGGGGG+GGG | + | chr1.4:84957359-84957378 | None:intergenic | 65.0% |
| CGCCGCCACTTCTCCTGCTC+CGG | + | chr1.4:84956455-84956474 | None:intergenic | 70.0% | |
| CGGAGCAGGAGAAGTGGCGG+CGG | - | chr1.4:84956453-84956472 | MS.gene066069:CDS | 70.0% | |
| CGGCAGAACAATCGCGGCGG+TGG | - | chr1.4:84956496-84956515 | MS.gene066069:CDS | 70.0% | |
| GCCGCCACTTCTCCTGCTCC+GGG | + | chr1.4:84956454-84956473 | None:intergenic | 70.0% | |
| !! | AATTTTGGGGGGGGGGGGGG+GGG | + | chr1.4:84957357-84957376 | None:intergenic | 70.0% |
| !! | CAATTTTGGGGGGGGGGGGG+GGG | + | chr1.4:84957358-84957377 | None:intergenic | 70.0% |
| !! | ATTTTGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957356-84957375 | None:intergenic | 75.0% |
| !!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957355-84957374 | None:intergenic | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957354-84957373 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957353-84957372 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:84957352-84957371 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84955978 | 84959585 | 84955978 | ID=MS.gene066069 |
| chr1.4 | mRNA | 84955978 | 84959585 | 84955978 | ID=MS.gene066069.t1;Parent=MS.gene066069 |
| chr1.4 | exon | 84959529 | 84959585 | 84959529 | ID=MS.gene066069.t1.exon1;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84959529 | 84959585 | 84959529 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84958653 | 84959119 | 84958653 | ID=MS.gene066069.t1.exon2;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84958653 | 84959119 | 84958653 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84957772 | 84957955 | 84957772 | ID=MS.gene066069.t1.exon3;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84957772 | 84957955 | 84957772 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84957427 | 84957651 | 84957427 | ID=MS.gene066069.t1.exon4;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84957427 | 84957651 | 84957427 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84957208 | 84957324 | 84957208 | ID=MS.gene066069.t1.exon5;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84957208 | 84957324 | 84957208 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84956398 | 84956631 | 84956398 | ID=MS.gene066069.t1.exon6;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84956398 | 84956631 | 84956398 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| chr1.4 | exon | 84955978 | 84956184 | 84955978 | ID=MS.gene066069.t1.exon7;Parent=MS.gene066069.t1 |
| chr1.4 | CDS | 84955978 | 84956184 | 84955978 | ID=cds.MS.gene066069.t1;Parent=MS.gene066069.t1 |
| Gene Sequence |
| Protein sequence |
