AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052533


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052533.t1 MTR_4g090510 99.035 311 3 0 1 311 1 311 0.0 635
MS.gene052533.t1 MTR_2g012560 77.409 301 45 2 1 301 1 278 2.35e-172 479
MS.gene052533.t1 MTR_2g012560 75.083 301 43 3 1 301 1 269 4.58e-163 455
MS.gene052533.t1 MTR_2g090115 67.857 308 94 1 4 311 5 307 1.80e-162 455
MS.gene052533.t1 MTR_4g046110 72.026 311 79 3 3 311 2 306 3.49e-152 429
MS.gene052533.t1 MTR_5g027790 57.432 296 90 5 1 291 1 265 1.16e-119 345
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052533.t1 AT1G61250 69.010 313 69 5 1 310 1 288 4.48e-159 445
MS.gene052533.t1 AT1G11180 68.889 315 68 4 1 310 1 290 3.34e-158 443
MS.gene052533.t1 AT1G11180 66.984 315 67 5 1 310 1 283 4.34e-150 422
MS.gene052533.t1 AT1G11180 64.329 328 67 5 1 310 1 296 8.52e-148 417
MS.gene052533.t1 AT2G20840 67.961 309 71 3 3 311 2 282 1.65e-144 408
MS.gene052533.t1 AT1G61250 68.531 286 62 5 1 283 1 261 2.89e-142 402
MS.gene052533.t1 AT1G03550 61.812 309 91 2 3 311 2 283 1.80e-136 388
MS.gene052533.t1 AT2G20840 76.569 239 56 0 73 311 1 239 4.65e-131 372
MS.gene052533.t1 AT2G20840 76.569 239 56 0 73 311 1 239 4.65e-131 372
MS.gene052533.t1 AT1G03550 61.922 281 80 2 3 283 2 255 3.19e-122 351
MS.gene052533.t1 AT1G32050 56.803 294 94 5 1 292 1 263 2.30e-117 339
MS.gene052533.t1 AT1G03550 68.610 223 70 0 89 311 2 224 2.01e-112 325
MS.gene052533.t1 AT1G03550 60.385 260 76 2 3 262 2 234 2.17e-108 315
MS.gene052533.t1 AT1G03550 69.048 210 65 0 102 311 15 224 4.09e-105 306
MS.gene052533.t1 AT1G03550 62.551 243 64 2 3 245 2 217 7.40e-104 303
MS.gene052533.t1 AT1G03550 61.991 221 57 2 3 223 2 195 6.15e-96 282

Find 72 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGCATTTACTACATATT+TGG 0.085998 4.3:-23273410 MS.gene052533:CDS
GCAATGTCGTGATGGATAAT+TGG 0.196761 4.3:+23273469 None:intergenic
GCCATTATCTACTTCATATC+AGG 0.219332 4.3:-23272938 MS.gene052533:CDS
CCTGCTGATTATAATAATTA+TGG 0.242414 4.3:-23275239 MS.gene052533:CDS
GATAAGCATTTGGGTTATTC+AGG 0.247223 4.3:-23271990 MS.gene052533:intron
ACAGAAAGTGCTCTGAAATT+TGG 0.255387 4.3:-23272723 MS.gene052533:CDS
TGTTACTGCTGCTTGGATTA+AGG 0.267197 4.3:-23273246 MS.gene052533:CDS
GATTATAATAATTATGGCTT+TGG 0.323050 4.3:-23275233 MS.gene052533:CDS
TGGAAACGTTGATAAGCATT+TGG 0.329849 4.3:-23272000 MS.gene052533:CDS
TTGGCAGGTGGAACACTTCC+AGG 0.333344 4.3:+23275293 None:intergenic
ATAGACAACTCTACTTTGAT+TGG 0.339286 4.3:-23272197 MS.gene052533:CDS
CGACATTGCTAATGAAATTC+CGG 0.348677 4.3:-23273455 MS.gene052533:CDS
CACCACCACTGTAGTTTGAT+TGG 0.353619 4.3:+23276071 None:intergenic
GTTACTGCTGCTTGGATTAA+GGG 0.358124 4.3:-23273245 MS.gene052533:CDS
GTTGCATTTACTACATATTT+GGG 0.367478 4.3:-23273409 MS.gene052533:intron
TCTTCTCAAATCAGCCTCCT+TGG 0.380522 4.3:+23275018 None:intergenic
AAAGAAGAACTTACAGAAAA+GGG 0.387916 4.3:+23277164 None:intergenic
CAGCTATAACATTCCACAAT+AGG 0.403682 4.3:+23273267 None:intergenic
CAATGTCGTGATGGATAATT+GGG 0.404575 4.3:+23273470 None:intergenic
AGAGTTGTCTATCACATCTA+TGG 0.411851 4.3:+23272208 None:intergenic
TAGACAACTCTACTTTGATT+GGG 0.415020 4.3:-23272196 MS.gene052533:CDS
GGAAACGTTGATAAGCATTT+GGG 0.415274 4.3:-23271999 MS.gene052533:CDS
AAAAGAAGAACTTACAGAAA+AGG 0.421381 4.3:+23277163 None:intergenic
TCAAATCAGCCTCCTTGGAT+TGG 0.431822 4.3:+23275023 None:intergenic
AAATGCTTATCAACGTTTCC+AGG 0.442725 4.3:+23272002 None:intergenic
TTAACTTCTTCTTCATCAAA+GGG 0.448107 4.3:+23277188 None:intergenic
TACTTCATATCAGGGGTACC+TGG 0.455209 4.3:-23272929 MS.gene052533:CDS
CCCTGATATGAAGTAGATAA+TGG 0.455504 4.3:+23272937 None:intergenic
AGGAGGCTGATTTGAGAAGA+AGG 0.459934 4.3:-23275015 MS.gene052533:CDS
GTTAACTTCTTCTTCATCAA+AGG 0.471618 4.3:+23277187 None:intergenic
TTATAGCTGTTACTGCTGCT+TGG 0.474726 4.3:-23273253 MS.gene052533:CDS
TTGTTCTTGAGGAAAAGAAT+TGG 0.479685 4.3:-23273504 MS.gene052533:CDS
GTAAGGCTGCTGAGATGAAA+CGG 0.481306 4.3:-23271823 MS.gene052533:CDS
TTATTATAATCAGCAGGCTC+TGG 0.486525 4.3:+23275245 None:intergenic
TGATTTGAGAAGAAGGGAAC+AGG 0.499440 4.3:-23275008 MS.gene052533:intron
CTAACAGGAACCAGCTGCAA+GGG 0.502793 4.3:-23276107 MS.gene052533:intron
AGATGAAACGGGACGTTGCA+AGG 0.512415 4.3:-23271811 MS.gene052533:CDS
TACATGTACTTCCGCGGAAG+TGG 0.512831 4.3:-23271845 MS.gene052533:CDS
GACTAGTGGCGTGCCTATTG+TGG 0.513746 4.3:-23273280 MS.gene052533:CDS
GTACTTCCGCGGAAGTGGTA+AGG 0.515999 4.3:-23271840 MS.gene052533:CDS
CCATTATCTACTTCATATCA+GGG 0.537386 4.3:-23272937 MS.gene052533:CDS
CCATAATTATTATAATCAGC+AGG 0.544102 4.3:+23275239 None:intergenic
ATCGTCACAGATCTCATGGC+TGG 0.555595 4.3:-23277227 None:intergenic
TAAGGCTGCTGAGATGAAAC+GGG 0.555749 4.3:-23271822 MS.gene052533:CDS
AAAGTGCTCTGAAATTTGGA+TGG 0.555769 4.3:-23272719 MS.gene052533:CDS
TTTCCTTTGAAAACTATAGG+AGG 0.556106 4.3:+23272517 None:intergenic
TGCAGCTGGAATTGTTCTTG+AGG 0.560259 4.3:-23273515 MS.gene052533:intron
TCAGCAGGCTCTGGCTCAAG+AGG 0.572777 4.3:+23275254 None:intergenic
GGAGGCTGATTTGAGAAGAA+GGG 0.574251 4.3:-23275014 MS.gene052533:CDS
TACCACAGAACATATGCTCC+AGG 0.578297 4.3:+23272911 None:intergenic
TTTCATTAGCAATGTCGTGA+TGG 0.578986 4.3:+23273461 None:intergenic
GATGAAACGGGACGTTGCAA+GGG 0.579861 4.3:-23271810 MS.gene052533:CDS
GCTGTATCATGCAGGACTAG+TGG 0.591145 4.3:-23273294 MS.gene052533:intron
TTCTGCTTACAGGTTCACAT+AGG 0.596304 4.3:-23272565 MS.gene052533:intron
GGAGAAGGAACTCCAATCCA+AGG 0.597039 4.3:-23275035 MS.gene052533:CDS
TACCTGGAGCATATGTTCTG+TGG 0.610432 4.3:-23272913 MS.gene052533:CDS
ACTAACAGGAACCAGCTGCA+AGG 0.617019 4.3:-23276108 MS.gene052533:intron
AGACAACTCTACTTTGATTG+GGG 0.620543 4.3:-23272195 MS.gene052533:intron
CATACCGTTGATGTATCAAG+AGG 0.630477 4.3:+23275194 None:intergenic
AAGAAGAACTTACAGAAAAG+GGG 0.636378 4.3:+23277165 None:intergenic
AGCCAATCAAACTACAGTGG+TGG 0.647558 4.3:-23276073 MS.gene052533:CDS
AAAGAAGAAGCTGCTGCACG+AGG 0.652474 4.3:-23273868 MS.gene052533:intron
ATGAAACGGGACGTTGCAAG+GGG 0.655213 4.3:-23271809 MS.gene052533:CDS
TAACAGGAACCAGCTGCAAG+GGG 0.655833 4.3:-23276106 MS.gene052533:intron
TAACTTCTTCTTCATCAAAG+GGG 0.656707 4.3:+23277189 None:intergenic
CAGCAGCCTTACCACTTCCG+CGG 0.662593 4.3:+23271834 None:intergenic
GCTGCTTGGATTAAGGGTGA+AGG 0.667466 4.3:-23273239 MS.gene052533:intron
CAAGTATACATGTACTTCCG+CGG 0.676518 4.3:-23271851 MS.gene052533:CDS
TATACCTCTTGATACATCAA+CGG 0.679523 4.3:-23275198 MS.gene052533:intron
CATTATCTACTTCATATCAG+GGG 0.696824 4.3:-23272936 MS.gene052533:CDS
TCAAGCCAATCAAACTACAG+TGG 0.718625 4.3:-23276076 MS.gene052533:CDS
GAAGGAACTCCAATCCAAGG+AGG 0.750966 4.3:-23275032 MS.gene052533:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGTAATAATTATTG+AGG - chr4.3:23273450-23273469 MS.gene052533:CDS 10.0%
!!! ATTTTTATTATTTTCATATG+GGG - chr4.3:23273408-23273427 MS.gene052533:intron 10.0%
!!! GAATTTTTATTATTTTCATA+TGG - chr4.3:23273406-23273425 MS.gene052533:intron 10.0%
!!! TTTTAAAATTGTATGAAATT+TGG - chr4.3:23274657-23274676 MS.gene052533:intron 10.0%
!! AAAAGATATAATTCATTACA+AGG + chr4.3:23273541-23273560 None:intergenic 15.0%
!! ATATCATATCTTACAAAAAA+TGG + chr4.3:23273597-23273616 None:intergenic 15.0%
!! TAAAAGATTTGCAAAATAAT+AGG + chr4.3:23273267-23273286 None:intergenic 15.0%
!! TAATATCATTATTCAATAGT+TGG + chr4.3:23274501-23274520 None:intergenic 15.0%
!! TCATTTATATAATCTAATGT+TGG - chr4.3:23276730-23276749 MS.gene052533:intron 15.0%
!! TGAACATAAATAATTATAAC+CGG + chr4.3:23272988-23273007 None:intergenic 15.0%
!! TTATTATCCATTTCAATATT+AGG - chr4.3:23273928-23273947 MS.gene052533:intron 15.0%
!!! ATCTTGATTTTATTCTTTAA+AGG - chr4.3:23271905-23271924 MS.gene052533:intron 15.0%
!!! CAATTTGAAATTAAAATAGA+GGG + chr4.3:23272303-23272322 None:intergenic 15.0%
!!! GTAAAAGAAGTTTTTTTTTT+TGG - chr4.3:23275796-23275815 MS.gene052533:intron 15.0%
!!! TATTATTTTGCAAATCTTTT+AGG - chr4.3:23273266-23273285 MS.gene052533:CDS 15.0%
!!! TCAATTTGAAATTAAAATAG+AGG + chr4.3:23272304-23272323 None:intergenic 15.0%
!!! TCTTGATTTTATTCTTTAAA+GGG - chr4.3:23271906-23271925 MS.gene052533:intron 15.0%
!!! TTATTTCTAATTTCTAATAG+TGG + chr4.3:23274732-23274751 None:intergenic 15.0%
!!! TTCTGAAACAAATATAAATA+CGG + chr4.3:23275170-23275189 None:intergenic 15.0%
!!! TTGTTTTAGTTGTTAAATTT+TGG - chr4.3:23271959-23271978 MS.gene052533:intron 15.0%
!! AAACTAAATAATATTCCATC+AGG + chr4.3:23274640-23274659 None:intergenic 20.0%
!! ACATGCAAATACATTATAAA+TGG + chr4.3:23273874-23273893 None:intergenic 20.0%
!! AGATAAAATTAGACATTGAT+AGG - chr4.3:23274548-23274567 MS.gene052533:intron 20.0%
!! ATAAGATCAAAATGATTTAC+AGG + chr4.3:23273650-23273669 None:intergenic 20.0%
!! ATATAAAACAATCAGATTCT+TGG + chr4.3:23274836-23274855 None:intergenic 20.0%
!! ATATTAGGATTTGAAAAAGA+AGG - chr4.3:23273943-23273962 MS.gene052533:intron 20.0%
!! ATTCTTAAAGAGAATTACAA+TGG - chr4.3:23274690-23274709 MS.gene052533:intron 20.0%
!! GAAAGAAAATTTGTAAACTT+TGG - chr4.3:23276661-23276680 MS.gene052533:intron 20.0%
!! GATTATAATAATTATGGCTT+TGG - chr4.3:23273766-23273785 MS.gene052533:intron 20.0%
!! TAACATATATATATAGGTTG+AGG - chr4.3:23274393-23274412 MS.gene052533:intron 20.0%
!! TTATTTATTTATCCAAATGC+AGG - chr4.3:23275097-23275116 MS.gene052533:intron 20.0%
!! TTCAAATCCTAATATTGAAA+TGG + chr4.3:23273938-23273957 None:intergenic 20.0%
!! TTCCACAAAATGTTATTAAA+TGG + chr4.3:23274462-23274481 None:intergenic 20.0%
!!! AACATATATATATAGGTTGA+GGG - chr4.3:23274394-23274413 MS.gene052533:intron 20.0%
!!! AAGTATCTATTTTTAGTTGT+TGG - chr4.3:23272053-23272072 MS.gene052533:intron 20.0%
!!! ATACTTTTGAGAGTTATAAT+TGG - chr4.3:23274253-23274272 MS.gene052533:intron 20.0%
!!! ATATGATCTATTTGAAGTTA+GGG - chr4.3:23272765-23272784 MS.gene052533:intron 20.0%
!!! GTTTTAATGTTGTTTTGTTT+TGG - chr4.3:23272107-23272126 MS.gene052533:intron 20.0%
!!! TACTATGTTTTCCTTAATTT+TGG - chr4.3:23272863-23272882 MS.gene052533:intron 20.0%
!!! TCTGAAACAAATATAAATAC+GGG + chr4.3:23275169-23275188 None:intergenic 20.0%
!!! TGATTAAGGATTTTAAAACT+CGG - chr4.3:23272800-23272819 MS.gene052533:intron 20.0%
!!! TTTATATCATTTCTGAAGTT+TGG - chr4.3:23274849-23274868 MS.gene052533:intron 20.0%
!!! TTTGCACTATATTTTGATTT+TGG - chr4.3:23272276-23272295 MS.gene052533:intron 20.0%
! AAAAGAAGAACTTACAGAAA+AGG + chr4.3:23271839-23271858 None:intergenic 25.0%
! AAAGAAGAACTTACAGAAAA+GGG + chr4.3:23271838-23271857 None:intergenic 25.0%
! AATTGTTACAATCCGAAATT+AGG - chr4.3:23274891-23274910 MS.gene052533:intron 25.0%
! AATTTCGCAATTAACCAAAT+GGG + chr4.3:23274363-23274382 None:intergenic 25.0%
! AGTTATAACATAATCAGCAA+AGG + chr4.3:23273321-23273340 None:intergenic 25.0%
! ATAATTCATTACAAGGTAGT+GGG + chr4.3:23273534-23273553 None:intergenic 25.0%
! CAAGAATCAATGTTATATGA+TGG + chr4.3:23274190-23274209 None:intergenic 25.0%
! CATATCTTACAAAAAATGGA+TGG + chr4.3:23273593-23273612 None:intergenic 25.0%
! CCATAATTATTATAATCAGC+AGG + chr4.3:23273763-23273782 None:intergenic 25.0%
! CTTTATTAGAATTTGGATTG+GGG + chr4.3:23272686-23272705 None:intergenic 25.0%
! GTTGCATTTACTACATATTT+GGG - chr4.3:23275590-23275609 MS.gene052533:intron 25.0%
! TACCTAAAAACACGATATAA+TGG + chr4.3:23276118-23276137 None:intergenic 25.0%
! TATAATTCATTACAAGGTAG+TGG + chr4.3:23273535-23273554 None:intergenic 25.0%
! TATGCATTGTAAGAAAATCA+TGG + chr4.3:23277097-23277116 None:intergenic 25.0%
! TATTTATTCACACTGATACA+GGG - chr4.3:23276756-23276775 MS.gene052533:intron 25.0%
! TATTTCAACAGCTATTTGAT+AGG + chr4.3:23272505-23272524 None:intergenic 25.0%
! TGAATGAGCTTAAAGATAAA+CGG + chr4.3:23277059-23277078 None:intergenic 25.0%
! TGAGTTTATTAATCAAACAC+CGG - chr4.3:23272966-23272985 MS.gene052533:intron 25.0%
! TGGAAAGAAAAAAAAAACTG+AGG + chr4.3:23273854-23273873 None:intergenic 25.0%
! TGTTGCATTTACTACATATT+TGG - chr4.3:23275589-23275608 MS.gene052533:intron 25.0%
! TTAAAGAGAATTACAATGGT+TGG - chr4.3:23274694-23274713 MS.gene052533:intron 25.0%
! TTAACTTCTTCTTCATCAAA+GGG + chr4.3:23271814-23271833 None:intergenic 25.0%
! TTCTGCTTAATTCTTCTAAT+AGG - chr4.3:23275445-23275464 MS.gene052533:intron 25.0%
! TTGTGTAACTATAACTGTAT+TGG - chr4.3:23272245-23272264 MS.gene052533:intron 25.0%
! TTTATGCATGTAAACATGAA+TGG - chr4.3:23273102-23273121 MS.gene052533:intron 25.0%
!! AAAAGGTGTATATAAATGGA+AGG - chr4.3:23272620-23272639 MS.gene052533:intron 25.0%
!! ATTTTCTACTTCATTGGATT+TGG - chr4.3:23276965-23276984 MS.gene052533:intron 25.0%
!! CATATTTAGAATCAAGAGTA+TGG + chr4.3:23276238-23276257 None:intergenic 25.0%
!! CCTGCTGATTATAATAATTA+TGG - chr4.3:23273760-23273779 MS.gene052533:intron 25.0%
!! CTTGAAAAGGTGTATATAAA+TGG - chr4.3:23272616-23272635 MS.gene052533:intron 25.0%
!! GATATGATCTATTTGAAGTT+AGG - chr4.3:23272764-23272783 MS.gene052533:intron 25.0%
!! GCTTTATTAGAATTTGGATT+GGG + chr4.3:23272687-23272706 None:intergenic 25.0%
!! GTTAGTTTAGACCAAAATTA+AGG + chr4.3:23272877-23272896 None:intergenic 25.0%
!! TAAATTGCTATTACTGTTTG+AGG - chr4.3:23275236-23275255 MS.gene052533:CDS 25.0%
!! TATGATCTATTTGAAGTTAG+GGG - chr4.3:23272766-23272785 MS.gene052533:intron 25.0%
!! TTGTAGATTTTCTACTTCAT+TGG - chr4.3:23276959-23276978 MS.gene052533:intron 25.0%
!! TTTTTACAATCTGAACTCTA+AGG - chr4.3:23273557-23273576 MS.gene052533:intron 25.0%
!!! AAAGTTTTGACTTTTTGAAC+TGG - chr4.3:23271863-23271882 MS.gene052533:intron 25.0%
!!! AAGTTTTGACTTTTTGAACT+GGG - chr4.3:23271864-23271883 MS.gene052533:intron 25.0%
!!! AGCTTTATTAGAATTTGGAT+TGG + chr4.3:23272688-23272707 None:intergenic 25.0%
!!! CTTTTTTGACTACATTTTTG+TGG - chr4.3:23276559-23276578 MS.gene052533:intron 25.0%
!!! GATTTTCCTTTGAAAACTAT+AGG + chr4.3:23276488-23276507 None:intergenic 25.0%
!!! GCATTAGCTTTATTAGAATT+TGG + chr4.3:23272693-23272712 None:intergenic 25.0%
!!! TAATTTTGGTCTAAACTAAC+AGG - chr4.3:23272877-23272896 MS.gene052533:intron 25.0%
!!! TATTTTTAAGAATTCAGCTC+AGG - chr4.3:23272212-23272231 MS.gene052533:CDS 25.0%
!!! TGCCATTTAATAACATTTTG+TGG - chr4.3:23274457-23274476 MS.gene052533:intron 25.0%
!!! TTTTTAAAATGTCAGAATCC+TGG - chr4.3:23273688-23273707 MS.gene052533:intron 25.0%
AACAGAAATATGGATATGGA+AGG + chr4.3:23274148-23274167 None:intergenic 30.0%
AACATAGTAAATAAGTCAGC+AGG + chr4.3:23272852-23272871 None:intergenic 30.0%
AAGAAGAACTTACAGAAAAG+GGG + chr4.3:23271837-23271856 None:intergenic 30.0%
AAGTCACAAGTAACAACAAT+AGG - chr4.3:23273031-23273050 MS.gene052533:intron 30.0%
ACAAGTATCTAGAAATTCAC+AGG - chr4.3:23275056-23275075 MS.gene052533:intron 30.0%
ACAGAAATATGGATATGGAA+GGG + chr4.3:23274147-23274166 None:intergenic 30.0%
ACATAGTAAATAAGTCAGCA+GGG + chr4.3:23272851-23272870 None:intergenic 30.0%
AGACCTTAATAAAATTCTGC+AGG + chr4.3:23275300-23275319 None:intergenic 30.0%
AGACTTCTCAAACAGAAATA+TGG + chr4.3:23274158-23274177 None:intergenic 30.0%
ATAGACAACTCTACTTTGAT+TGG - chr4.3:23276802-23276821 MS.gene052533:intron 30.0%
ATTTATTCACACTGATACAG+GGG - chr4.3:23276757-23276776 MS.gene052533:intron 30.0%
CAAGTAACAACAATAGGTTA+TGG - chr4.3:23273037-23273056 MS.gene052533:intron 30.0%
CAATTTCGCAATTAACCAAA+TGG + chr4.3:23274364-23274383 None:intergenic 30.0%
CAGAACTAAATTTGTAGAGA+AGG + chr4.3:23275430-23275449 None:intergenic 30.0%
CATAACTTATGCACATGAAT+TGG + chr4.3:23276374-23276393 None:intergenic 30.0%
CATGCCATAACAAACAAAAA+GGG + chr4.3:23272356-23272375 None:intergenic 30.0%
CATTATAAGTCGGATTTGTA+GGG - chr4.3:23272650-23272669 MS.gene052533:intron 30.0%
CATTATCTACTTCATATCAG+GGG - chr4.3:23276063-23276082 MS.gene052533:CDS 30.0%
CATTTGGTTAATTGCGAAAT+TGG - chr4.3:23274362-23274381 MS.gene052533:intron 30.0%
CCATTATCTACTTCATATCA+GGG - chr4.3:23276062-23276081 MS.gene052533:CDS 30.0%
CTAAAGTTAAATTGTATCGC+TGG + chr4.3:23273496-23273515 None:intergenic 30.0%
CTATTTATTCACACTGATAC+AGG - chr4.3:23276755-23276774 MS.gene052533:intron 30.0%
CTCAAACAGAAATATGGATA+TGG + chr4.3:23274152-23274171 None:intergenic 30.0%
CTCTAATGCGATCTAAATTT+GGG + chr4.3:23272482-23272501 None:intergenic 30.0%
GAAATGAGAAATGAAAACAG+AGG + chr4.3:23274117-23274136 None:intergenic 30.0%
GGGATAAGAGTTTATGATTA+AGG - chr4.3:23272786-23272805 MS.gene052533:intron 30.0%
GTTAACTTCTTCTTCATCAA+AGG + chr4.3:23271815-23271834 None:intergenic 30.0%
TAACTTCTTCTTCATCAAAG+GGG + chr4.3:23271813-23271832 None:intergenic 30.0%
TAGACAACTCTACTTTGATT+GGG - chr4.3:23276803-23276822 MS.gene052533:intron 30.0%
TATACCTCTTGATACATCAA+CGG - chr4.3:23273801-23273820 MS.gene052533:intron 30.0%
TCATGCCATAACAAACAAAA+AGG + chr4.3:23272357-23272376 None:intergenic 30.0%
TCATTATAAGTCGGATTTGT+AGG - chr4.3:23272649-23272668 MS.gene052533:intron 30.0%
TTGACACAGGTGTAAAAATT+TGG - chr4.3:23276032-23276051 MS.gene052533:intron 30.0%
TTGGTCACATTTGCAATATT+TGG + chr4.3:23276903-23276922 None:intergenic 30.0%
TTGTTCTTGAGGAAAAGAAT+TGG - chr4.3:23275495-23275514 MS.gene052533:intron 30.0%
TTTGAGAAGTCTTAAATAGC+TGG - chr4.3:23274310-23274329 MS.gene052533:intron 30.0%
! AACAATTCAGAAGTTTGCTT+TGG + chr4.3:23276922-23276941 None:intergenic 30.0%
! AATGATGATGCATAAAGAAG+AGG - chr4.3:23273198-23273217 MS.gene052533:intron 30.0%
! ACATAATCAGCAAAGGTTTT+TGG + chr4.3:23273314-23273333 None:intergenic 30.0%
! AGGTGTAAAAATTTGGTTTC+TGG - chr4.3:23276039-23276058 MS.gene052533:intron 30.0%
! ATGATACAGCTTTTAATCAG+TGG + chr4.3:23275695-23275714 None:intergenic 30.0%
! ATGGTTTTTCATGCTTTATC+TGG - chr4.3:23276299-23276318 MS.gene052533:intron 30.0%
! GTAGTGGGATTTATAAAAAC+TGG + chr4.3:23273519-23273538 None:intergenic 30.0%
! GTCCATTATATCGTGTTTTT+AGG - chr4.3:23276113-23276132 MS.gene052533:intron 30.0%
! TGATGGATAATTGGGAAAAA+TGG + chr4.3:23275524-23275543 None:intergenic 30.0%
! TGTCCTGCAGAATTTTATTA+AGG - chr4.3:23275294-23275313 MS.gene052533:CDS 30.0%
! TGTGTCTTTTTGTTCACTTT+AGG - chr4.3:23274032-23274051 MS.gene052533:intron 30.0%
! TTTCCTTTGAAAACTATAGG+AGG + chr4.3:23276485-23276504 None:intergenic 30.0%
!! AATGCCCTTTTTGTTTGTTA+TGG - chr4.3:23272349-23272368 MS.gene052533:intron 30.0%
!! GTGTTAGTCATTTTATATCG+CGG - chr4.3:23275669-23275688 MS.gene052533:intron 30.0%
!! TGCAATTTTTGAAGATGAAC+CGG + chr4.3:23275566-23275585 None:intergenic 30.0%
!! TTTCTGTATTGATGATGATG+TGG - chr4.3:23272325-23272344 MS.gene052533:intron 30.0%
!!! GTTGTTAAATTTTGGTTGAC+TGG - chr4.3:23271967-23271986 MS.gene052533:intron 30.0%
!!! TTAAATTTTGGTTGACTGGT+TGG - chr4.3:23271971-23271990 MS.gene052533:intron 30.0%
AAATGCTTATCAACGTTTCC+AGG + chr4.3:23277000-23277019 None:intergenic 35.0%
AAGGTGATAGATGTGACATT+AGG + chr4.3:23272424-23272443 None:intergenic 35.0%
AAGTAAACCTATCTTCTGCA+AGG + chr4.3:23276612-23276631 None:intergenic 35.0%
AATGCGATCTAAATTTGGGT+TGG + chr4.3:23272478-23272497 None:intergenic 35.0%
ACACAATACTCAAGAACCAA+TGG + chr4.3:23275653-23275672 None:intergenic 35.0%
ACATCTATCACCTTACTAGT+CGG - chr4.3:23272430-23272449 MS.gene052533:intron 35.0%
ACATGAACGAATGCATGAAT+AGG + chr4.3:23274808-23274827 None:intergenic 35.0%
ACCTCATAAGGTGAATAAGT+GGG - chr4.3:23275844-23275863 MS.gene052533:intron 35.0%
AGACAACTCTACTTTGATTG+GGG - chr4.3:23276804-23276823 MS.gene052533:intron 35.0%
AGACTTACTCCTGAAATAAG+TGG - chr4.3:23274780-23274799 MS.gene052533:intron 35.0%
AGACTTCTCAAACAGAAAGA+TGG + chr4.3:23274302-23274321 None:intergenic 35.0%
AGAGTTGTCTATCACATCTA+TGG + chr4.3:23276794-23276813 None:intergenic 35.0%
AGGCATCTCTCATTATAAGT+CGG - chr4.3:23272640-23272659 MS.gene052533:intron 35.0%
AGTTAAATTGTATCGCTGGA+TGG + chr4.3:23273492-23273511 None:intergenic 35.0%
AGTTAACTTTGCCTGCATAA+GGG - chr4.3:23275007-23275026 MS.gene052533:intron 35.0%
AGTTAGTGCTAAAGATTAGG+AGG - chr4.3:23273070-23273089 MS.gene052533:intron 35.0%
ATCAATTGAGCTATGCTCAT+GGG - chr4.3:23275919-23275938 MS.gene052533:intron 35.0%
ATTATGAGACTGCAACAAGT+TGG - chr4.3:23276190-23276209 MS.gene052533:intron 35.0%
CAGAAATATGGATATGGAAG+GGG + chr4.3:23274146-23274165 None:intergenic 35.0%
CAGCTATAACATTCCACAAT+AGG + chr4.3:23275735-23275754 None:intergenic 35.0%
CAGTACAAATGTTCCAATCT+CGG + chr4.3:23274084-23274103 None:intergenic 35.0%
CCCTGATATGAAGTAGATAA+TGG + chr4.3:23276065-23276084 None:intergenic 35.0%
CGACATTGCTAATGAAATTC+CGG - chr4.3:23275544-23275563 MS.gene052533:intron 35.0%
GAATAGGATCCACTTATTTC+AGG + chr4.3:23274792-23274811 None:intergenic 35.0%
GATTAAAAGCTGTATCATGC+AGG - chr4.3:23275697-23275716 MS.gene052533:intron 35.0%
GATTATATTAGCGACCCATT+TGG - chr4.3:23274346-23274365 MS.gene052533:intron 35.0%
GCCATTATCTACTTCATATC+AGG - chr4.3:23276061-23276080 MS.gene052533:CDS 35.0%
GCTCTAATGCGATCTAAATT+TGG + chr4.3:23272483-23272502 None:intergenic 35.0%
GGATTTGAAAAAGAAGGAGA+AGG - chr4.3:23273949-23273968 MS.gene052533:intron 35.0%
GTCTCACATTAGATGTGATA+CGG - chr4.3:23272593-23272612 MS.gene052533:intron 35.0%
GTCTCTTTGATTCTTTGTGT+AGG - chr4.3:23272075-23272094 MS.gene052533:intron 35.0%
GTGATCCTCTTTATTGTTCT+TGG - chr4.3:23275616-23275635 MS.gene052533:intron 35.0%
GTTAAAATGAAGTTGCCTGA+TGG - chr4.3:23274622-23274641 MS.gene052533:intron 35.0%
TATCAATTGAGCTATGCTCA+TGG - chr4.3:23275918-23275937 MS.gene052533:intron 35.0%
TCAAGAACCAATGGCATAAT+TGG + chr4.3:23275644-23275663 None:intergenic 35.0%
TCCAGAGATCAACCTAATTT+CGG + chr4.3:23274906-23274925 None:intergenic 35.0%
TGGAACCAAGAACAATAAAG+AGG + chr4.3:23275624-23275643 None:intergenic 35.0%
TGGAGTTAGTGCTAAAGATT+AGG - chr4.3:23273067-23273086 MS.gene052533:intron 35.0%
TGGATAATTGGGAAAAATGG+CGG + chr4.3:23275521-23275540 None:intergenic 35.0%
TGGCAAAACTTGAAAGTTTC+AGG + chr4.3:23274442-23274461 None:intergenic 35.0%
TTATGAGACTGCAACAAGTT+GGG - chr4.3:23276191-23276210 MS.gene052533:intron 35.0%
TTATTATAATCAGCAGGCTC+TGG + chr4.3:23273757-23273776 None:intergenic 35.0%
TTTCATTAGCAATGTCGTGA+TGG + chr4.3:23275541-23275560 None:intergenic 35.0%
TTTCTGTCCTGCAATGAAAA+AGG + chr4.3:23276263-23276282 None:intergenic 35.0%
! AGCATAGCTCAATTGATAGT+AGG + chr4.3:23275916-23275935 None:intergenic 35.0%
! AGGTGAAAGCCTTGAATTTT+TGG + chr4.3:23273728-23273747 None:intergenic 35.0%
! ATTGCTATTACTGTTTGAGG+TGG - chr4.3:23275239-23275258 MS.gene052533:CDS 35.0%
! GATAAGCATTTGGGTTATTC+AGG - chr4.3:23277009-23277028 MS.gene052533:intron 35.0%
! GCATAGCTCAATTGATAGTA+GGG + chr4.3:23275915-23275934 None:intergenic 35.0%
! GGAAACGTTGATAAGCATTT+GGG - chr4.3:23277000-23277019 MS.gene052533:intron 35.0%
! TGGAAACGTTGATAAGCATT+TGG - chr4.3:23276999-23277018 MS.gene052533:intron 35.0%
! TTGTTTCTTCTTCTGCTTAC+AGG - chr4.3:23276424-23276443 MS.gene052533:intron 35.0%
! TTGTTTTCCTTGCAGAAGAT+AGG - chr4.3:23276602-23276621 MS.gene052533:intron 35.0%
!! AAAGTGCTCTGAAATTTGGA+TGG - chr4.3:23276280-23276299 MS.gene052533:intron 35.0%
!! AAGTTGATAAACCCTTATGC+AGG + chr4.3:23275021-23275040 None:intergenic 35.0%
!! ACAGAAAGTGCTCTGAAATT+TGG - chr4.3:23276276-23276295 MS.gene052533:intron 35.0%
!! ATATGCACCTTTTTCATTGC+AGG - chr4.3:23276253-23276272 MS.gene052533:intron 35.0%
!! CAATGTCGTGATGGATAATT+GGG + chr4.3:23275532-23275551 None:intergenic 35.0%
!!! ATAGCTGCTCACTTTTTCTT+TGG - chr4.3:23277114-23277133 MS.gene052533:intron 35.0%
!!! TTGACATTTTGTTTTGCAGC+TGG - chr4.3:23275470-23275489 MS.gene052533:intron 35.0%
!!! TTTTTTGGTCTAGTAGCAAG+TGG - chr4.3:23275811-23275830 MS.gene052533:intron 35.0%
AAAGCCATGTTTCATGCACA+TGG + chr4.3:23276010-23276029 None:intergenic 40.0%
AAAGTTTCAGGACTTTCCCT+CGG + chr4.3:23274430-23274449 None:intergenic 40.0%
AAGCCTGAGCTGAATTCTAA+AGG + chr4.3:23272138-23272157 None:intergenic 40.0%
AGAAACAAAAAGAGCCAAGC+AGG + chr4.3:23275354-23275373 None:intergenic 40.0%
AGAAGGGAACAGGTATACAA+TGG - chr4.3:23274001-23274020 MS.gene052533:intron 40.0%
AGATGTGATACGGCTTGAAA+AGG - chr4.3:23272603-23272622 MS.gene052533:intron 40.0%
ATCTCGGTAAATATCCACTG+AGG + chr4.3:23274068-23274087 None:intergenic 40.0%
ATTGAGTGCGTAGAGTAAGT+TGG + chr4.3:23276522-23276541 None:intergenic 40.0%
CAAGTATACATGTACTTCCG+CGG - chr4.3:23277148-23277167 MS.gene052533:intron 40.0%
CACCTCATAAGGTGAATAAG+TGG - chr4.3:23275843-23275862 MS.gene052533:intron 40.0%
CAGTGGATATTTACCGAGAT+TGG - chr4.3:23274068-23274087 MS.gene052533:intron 40.0%
CAGTTAACTTTGCCTGCATA+AGG - chr4.3:23275006-23275025 MS.gene052533:intron 40.0%
CATACCGTTGATGTATCAAG+AGG + chr4.3:23273808-23273827 None:intergenic 40.0%
CCTCATAAGGTGAATAAGTG+GGG - chr4.3:23275845-23275864 MS.gene052533:intron 40.0%
CTTGGTTCCAATTATGCCAT+TGG - chr4.3:23275634-23275653 MS.gene052533:intron 40.0%
GAAGGGAACAGGTATACAAT+GGG - chr4.3:23274002-23274021 MS.gene052533:intron 40.0%
GGACATTGCATGTAATATGC+AGG + chr4.3:23275894-23275913 None:intergenic 40.0%
GGCTAGAAATTCACCTCATA+AGG - chr4.3:23275832-23275851 MS.gene052533:intron 40.0%
TATGCCATGTGCATGAAACA+TGG - chr4.3:23276003-23276022 MS.gene052533:intron 40.0%
TCAAGCCAATCAAACTACAG+TGG - chr4.3:23272923-23272942 MS.gene052533:CDS 40.0%
TCAATTGAGCTATGCTCATG+GGG - chr4.3:23275920-23275939 MS.gene052533:intron 40.0%
TCTCGGTAAATATCCACTGA+GGG + chr4.3:23274067-23274086 None:intergenic 40.0%
TGACATGAGTGGTTCAATAG+TGG + chr4.3:23272529-23272548 None:intergenic 40.0%
TGATTTGAGAAGAAGGGAAC+AGG - chr4.3:23273991-23274010 MS.gene052533:intron 40.0%
TGCACTAATTTAGTCCTGCT+TGG - chr4.3:23275337-23275356 MS.gene052533:intron 40.0%
TGCATGTAATATGCAGGAGT+CGG + chr4.3:23275888-23275907 None:intergenic 40.0%
TGTTTCATGCACATGGCATA+AGG + chr4.3:23276003-23276022 None:intergenic 40.0%
TTATAGCTGTTACTGCTGCT+TGG - chr4.3:23275746-23275765 MS.gene052533:intron 40.0%
TTCCACCTGCCAAAAATTCA+AGG - chr4.3:23273716-23273735 MS.gene052533:intron 40.0%
TTCTGCTTACAGGTTCACAT+AGG - chr4.3:23276434-23276453 MS.gene052533:intron 40.0%
TTCTTGCAAGAATCGAACTG+AGG - chr4.3:23273895-23273914 MS.gene052533:intron 40.0%
! AGAATTCAGCTCAGGCTTTT+AGG - chr4.3:23272140-23272159 MS.gene052533:intron 40.0%
! ATTTGGATTGGGGCTATCTT+AGG + chr4.3:23272676-23272695 None:intergenic 40.0%
! GAATTCAGCTCAGGCTTTTT+AGG - chr4.3:23272141-23272160 MS.gene052533:intron 40.0%
! GCTCCTCCTATAGTTTTCAA+AGG - chr4.3:23276479-23276498 MS.gene052533:intron 40.0%
! GCTTTTCTGTGATGCTTTTC+AGG - chr4.3:23273366-23273385 MS.gene052533:intron 40.0%
! GTACTATGGTTGATGTGGTT+GGG - chr4.3:23271993-23272012 MS.gene052533:CDS 40.0%
! GTTACTGCTGCTTGGATTAA+GGG - chr4.3:23275754-23275773 MS.gene052533:intron 40.0%
! TACTATGGTTGATGTGGTTG+GGG - chr4.3:23271994-23272013 MS.gene052533:CDS 40.0%
! TGAGCTGAATTCTAAAGGCA+AGG + chr4.3:23272133-23272152 None:intergenic 40.0%
! TGGATTTGGATTTTTCTGCC+TGG - chr4.3:23276979-23276998 MS.gene052533:intron 40.0%
! TGTTACTGCTGCTTGGATTA+AGG - chr4.3:23275753-23275772 MS.gene052533:intron 40.0%
!! AACATGGCTTTGTTTGACAC+AGG - chr4.3:23276019-23276038 MS.gene052533:intron 40.0%
!! CAATCTGAACTCTAAGGTCT+AGG - chr4.3:23273563-23273582 MS.gene052533:intron 40.0%
!! GCAATGTCGTGATGGATAAT+TGG + chr4.3:23275533-23275552 None:intergenic 40.0%
!! TCCGAAATTAGGTTGATCTC+TGG - chr4.3:23274902-23274921 MS.gene052533:intron 40.0%
!! TTGCCTTTAGAATTCAGCTC+AGG - chr4.3:23272132-23272151 MS.gene052533:intron 40.0%
!!! GAAAGCCTTGAATTTTTGGC+AGG + chr4.3:23273724-23273743 None:intergenic 40.0%
AGCCAATCAAACTACAGTGG+TGG - chr4.3:23272926-23272945 MS.gene052533:CDS 45.0%
CAATAGGTTATGGTCAGCAG+TGG - chr4.3:23273047-23273066 MS.gene052533:intron 45.0%
CACCACCACTGTAGTTTGAT+TGG + chr4.3:23272931-23272950 None:intergenic 45.0%
CATGTAATATGCAGGAGTCG+GGG + chr4.3:23275886-23275905 None:intergenic 45.0%
CCCCACTTATTCACCTTATG+AGG + chr4.3:23275848-23275867 None:intergenic 45.0%
CTCATGGGGACTATAGAAGA+AGG - chr4.3:23275934-23275953 MS.gene052533:intron 45.0%
GCATGTAATATGCAGGAGTC+GGG + chr4.3:23275887-23275906 None:intergenic 45.0%
GTAAGGCTGCTGAGATGAAA+CGG - chr4.3:23277176-23277195 MS.gene052533:intron 45.0%
GTGAATAAGTGGGGAGTTCA+GGG - chr4.3:23275854-23275873 MS.gene052533:intron 45.0%
TAAGGCTGCTGAGATGAAAC+GGG - chr4.3:23277177-23277196 MS.gene052533:intron 45.0%
TACCACAGAACATATGCTCC+AGG + chr4.3:23276091-23276110 None:intergenic 45.0%
TCAAATCAGCCTCCTTGGAT+TGG + chr4.3:23273979-23273998 None:intergenic 45.0%
TCTTCTCAAATCAGCCTCCT+TGG + chr4.3:23273984-23274003 None:intergenic 45.0%
TGCAGCTGGAATTGTTCTTG+AGG - chr4.3:23275484-23275503 MS.gene052533:intron 45.0%
TTCGTCTCACTTCCTGCATT+TGG + chr4.3:23275112-23275131 None:intergenic 45.0%
! ACGCTCTAGATATCCAATCC+TGG - chr4.3:23272548-23272567 MS.gene052533:CDS 45.0%
! CGCTCTAGATATCCAATCCT+GGG - chr4.3:23272549-23272568 MS.gene052533:CDS 45.0%
! GCATTTGGGTTATTCAGGTC+TGG - chr4.3:23277014-23277033 MS.gene052533:intron 45.0%
! GGTACTATGGTTGATGTGGT+TGG - chr4.3:23271992-23272011 MS.gene052533:CDS 45.0%
! GGTTGGTACTATGGTTGATG+TGG - chr4.3:23271988-23272007 MS.gene052533:intron 45.0%
! TATCTAGAGCGTGACATGAG+TGG + chr4.3:23272540-23272559 None:intergenic 45.0%
! TGGTTGACTGGTTGGTACTA+TGG - chr4.3:23271979-23271998 MS.gene052533:intron 45.0%
!! AGGAGGCTGATTTGAGAAGA+AGG - chr4.3:23273984-23274003 MS.gene052533:intron 45.0%
!! GGAGGCTGATTTGAGAAGAA+GGG - chr4.3:23273985-23274004 MS.gene052533:intron 45.0%
!!! AGCCTTGAATTTTTGGCAGG+TGG + chr4.3:23273721-23273740 None:intergenic 45.0%
!!! CTGCTCACTTTTTCTTTGGC+TGG - chr4.3:23277118-23277137 MS.gene052533:intron 45.0%
!!! GTTGGGGAAACTGGTTTTTG+AGG - chr4.3:23272010-23272029 MS.gene052533:CDS 45.0%
!! TTAAATTAACATATATATAT+AGG - chr4.3:23274387-23274406 MS.gene052533:intron 5.0%
!!! AATTTTTATTATTTTCATAT+GGG - chr4.3:23273407-23273426 MS.gene052533:intron 5.0%
AAAGAAGAAGCTGCTGCACG+AGG - chr4.3:23275131-23275150 MS.gene052533:intron 50.0%
ACTAACAGGAACCAGCTGCA+AGG - chr4.3:23272891-23272910 MS.gene052533:CDS 50.0%
AGATGAAACGGGACGTTGCA+AGG - chr4.3:23277188-23277207 MS.gene052533:CDS 50.0%
ATGAAACGGGACGTTGCAAG+GGG - chr4.3:23277190-23277209 MS.gene052533:CDS 50.0%
CTAACAGGAACCAGCTGCAA+GGG - chr4.3:23272892-23272911 MS.gene052533:CDS 50.0%
GAAGGAACTCCAATCCAAGG+AGG - chr4.3:23273967-23273986 MS.gene052533:intron 50.0%
GATATCCAATCCTGGGTGTG+AGG - chr4.3:23272556-23272575 MS.gene052533:CDS 50.0%
GATGAAACGGGACGTTGCAA+GGG - chr4.3:23277189-23277208 MS.gene052533:CDS 50.0%
GCTGCTTGGATTAAGGGTGA+AGG - chr4.3:23275760-23275779 MS.gene052533:intron 50.0%
GCTGTATCATGCAGGACTAG+TGG - chr4.3:23275705-23275724 MS.gene052533:intron 50.0%
GGAGAAGGAACTCCAATCCA+AGG - chr4.3:23273964-23273983 MS.gene052533:intron 50.0%
GGTGAATAAGTGGGGAGTTC+AGG - chr4.3:23275853-23275872 MS.gene052533:intron 50.0%
GTTGATGTGGTTGGGGAAAC+TGG - chr4.3:23272001-23272020 MS.gene052533:CDS 50.0%
TAACAGGAACCAGCTGCAAG+GGG - chr4.3:23272893-23272912 MS.gene052533:CDS 50.0%
TACATGTACTTCCGCGGAAG+TGG - chr4.3:23277154-23277173 MS.gene052533:intron 50.0%
! AGAGTAAGTTGGCGTACGTC+AGG + chr4.3:23276511-23276530 None:intergenic 50.0%
! CTCCACAACACCGACTAGTA+AGG + chr4.3:23272443-23272462 None:intergenic 50.0%
! GAGTAAGTTGGCGTACGTCA+GGG + chr4.3:23276510-23276529 None:intergenic 50.0%
! GATGTTTTTCCCCTTGCAGC+TGG + chr4.3:23272905-23272924 None:intergenic 50.0%
! TAGGTTGAGAGTTCCCTCAG+TGG - chr4.3:23274051-23274070 MS.gene052533:intron 50.0%
! TGAGGGTGCATTTAGTCCGA+GGG - chr4.3:23274411-23274430 MS.gene052533:intron 50.0%
! TTGAGGGTGCATTTAGTCCG+AGG - chr4.3:23274410-23274429 MS.gene052533:intron 50.0%
!! CACCTTACTAGTCGGTGTTG+TGG - chr4.3:23272438-23272457 MS.gene052533:intron 50.0%
!! CTTACTAGTCGGTGTTGTGG+AGG - chr4.3:23272441-23272460 MS.gene052533:intron 50.0%
AACACACACTCCTCACACCC+AGG + chr4.3:23272569-23272588 None:intergenic 55.0%
ACACTCCTCACACCCAGGAT+TGG + chr4.3:23272564-23272583 None:intergenic 55.0%
GACTAGTGGCGTGCCTATTG+TGG - chr4.3:23275719-23275738 MS.gene052533:intron 55.0%
GTACTTCCGCGGAAGTGGTA+AGG - chr4.3:23277159-23277178 MS.gene052533:intron 55.0%
TTGGCAGGTGGAACACTTCC+AGG + chr4.3:23273709-23273728 None:intergenic 55.0%
CAGCAGCCTTACCACTTCCG+CGG + chr4.3:23277168-23277187 None:intergenic 60.0%
! TCAGCAGGCTCTGGCTCAAG+AGG + chr4.3:23273748-23273767 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 23271787 23277234 23271787 ID=MS.gene052533
chr4.3 mRNA 23271787 23277234 23271787 ID=MS.gene052533.t1;Parent=MS.gene052533
chr4.3 exon 23277178 23277234 23277178 ID=MS.gene052533.t1.exon1;Parent=MS.gene052533.t1
chr4.3 CDS 23277178 23277234 23277178 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23276057 23276122 23276057 ID=MS.gene052533.t1.exon2;Parent=MS.gene052533.t1
chr4.3 CDS 23276057 23276122 23276057 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23275199 23275318 23275199 ID=MS.gene052533.t1.exon3;Parent=MS.gene052533.t1
chr4.3 CDS 23275199 23275318 23275199 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23275009 23275071 23275009 ID=MS.gene052533.t1.exon4;Parent=MS.gene052533.t1
chr4.3 CDS 23275009 23275071 23275009 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23273869 23273902 23273869 ID=MS.gene052533.t1.exon5;Parent=MS.gene052533.t1
chr4.3 CDS 23273869 23273902 23273869 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23273410 23273532 23273410 ID=MS.gene052533.t1.exon6;Parent=MS.gene052533.t1
chr4.3 CDS 23273410 23273532 23273410 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23273240 23273302 23273240 ID=MS.gene052533.t1.exon7;Parent=MS.gene052533.t1
chr4.3 CDS 23273240 23273302 23273240 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23272887 23272980 23272887 ID=MS.gene052533.t1.exon8;Parent=MS.gene052533.t1
chr4.3 CDS 23272887 23272980 23272887 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23272701 23272746 23272701 ID=MS.gene052533.t1.exon9;Parent=MS.gene052533.t1
chr4.3 CDS 23272701 23272746 23272701 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23272508 23272575 23272508 ID=MS.gene052533.t1.exon10;Parent=MS.gene052533.t1
chr4.3 CDS 23272508 23272575 23272508 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23272196 23272244 23272196 ID=MS.gene052533.t1.exon11;Parent=MS.gene052533.t1
chr4.3 CDS 23272196 23272244 23272196 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23271991 23272056 23271991 ID=MS.gene052533.t1.exon12;Parent=MS.gene052533.t1
chr4.3 CDS 23271991 23272056 23271991 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
chr4.3 exon 23271787 23271873 23271787 ID=MS.gene052533.t1.exon13;Parent=MS.gene052533.t1
chr4.3 CDS 23271787 23271873 23271787 ID=cds.MS.gene052533.t1;Parent=MS.gene052533.t1
Gene Sequence

>MS.gene052533

ATGGCTGGTCGCTATGATAGCAACCCCTTTGATGAAGAAGAAGTTAACCCCTTTTCTGTAAGTTCTTCTTTTTCTTAAAGTTTTGACTTTTTGAACTGGGTGTGAACTGTTTTTGTTGATCTTGATTTTATTCTTTAAAGGGTTGTTTTAGACTGAAACTTTAGTTCAATTGTTGTTTTAGTTGTTAAATTTTGGTTGACTGGTTGGTACTATGGTTGATGTGGTTGGGGAAACTGGTTTTTGAGGTTGTTTCTGTGTGTAAGTGTAAGTATCTATTTTTAGTTGTTGGTCTCTTTGATTCTTTGTGTAGGATTTTGTGTGTTTTAATGTTGTTTTGTTTTGGCCTTGCCTTTAGAATTCAGCTCAGGCTTTTTAGGATGCATCTTGCATAAGTTCTTGTGATTTGCTTGTAGATAAAGATGCTGTATTTTTAAGAATTCAGCTCAGGCTTTTAGGATTTGTGTAACTATAACTGTATTGGTTCTCATATTTGCACTATATTTTGATTTTGGTCCCTCTATTTTAATTTCAAATTGAATTTCTGTATTGATGATGATGTGGTAATGCCCTTTTTGTTTGTTATGGCATGAAATTATGAGAGTTGATCTTTTATTTACTTTGCTCGTACTAGCATCCTAATGTCACATCTATCACCTTACTAGTCGGTGTTGTGGAGGTGAATTTTAGTCCAACCCAAATTTAGATCGCATTAGAGCCTATCAAATAGCTGTTGAAATATCCACTATTGAACCACTCATGTCACGCTCTAGATATCCAATCCTGGGTGTGAGGAGTGTGTGTTGAGAGTCTCACATTAGATGTGATACGGCTTGAAAAGGTGTATATAAATGGAAGGCATCTCTCATTATAAGTCGGATTTGTAGGGCCTAAGATAGCCCCAATCCAAATTCTAATAAAGCTAATGCACTATGAAGAGATCACAATTATGAGCATGTATAGTTGTATTAAGAATTTAAGATATGATCTATTTGAAGTTAGGGGATAAGAGTTTATGATTAAGGATTTTAAAACTCGGTTGTTTGACTTCGACATAACTTATTCCCTGCTGACTTATTTACTATGTTTTCCTTAATTTTGGTCTAAACTAACAGGAACCAGCTGCAAGGGGAAAAACATCAAGCCAATCAAACTACAGTGGTGGTGCATTTTACACAACAGTGAGTTTATTAATCAAACACCGGTTATAATTATTTATGTTCATGAATTGCTTTTTGATAATTTAAAAGTCACAAGTAACAACAATAGGTTATGGTCAGCAGTGGAGTTAGTGCTAAAGATTAGGAGGAGTACAATTTTTATGCATGTAAACATGAATGGTACACAAAAATATTTGAGAAGTTCTAAATTTATATTCATAATCATAAAATCATATGATATTTTAATTTTAATGAATGATGATGCATAAAGAAGAGGTAATACTAATGTCAAACATTTCTAAAATATTTTTGAATCATTACCTATTATTTTGCAAATCTTTTAGGATAAATTGTTGTGACAAAATTACCAAAAACCTTTGCTGATTATGTTATAACTAAACATCACGTTGATGATATTCAGAGCTTTTCTGTGATGCTTTTCAGGTGCATGAATGTGATGTTGAATTTTTATTATTTTCATATGGGGAGAAAAATTAAGATGAGATAAAAAAAGTAATAATTATTGAGGAAGTGAAAGAAGCACTCCATCCAGCGATACAATTTAACTTTAGCCAGTTTTTATAAATCCCACTACCTTGTAATGAATTATATCTTTTTACAATCTGAACTCTAAGGTCTAGGTTCACCATCCATTTTTTGTAAGATATGATATATAGTACATGTGTGATGTGCTGATAAAAAGCCTGTAAATCATTTTGATCTTATGCTTCTTGCTTCATATTGTTTTTAAAATGTCAGAATCCTGGAAGTGTTCCACCTGCCAAAAATTCAAGGCTTTCACCTCTTGAGCCAGAGCCTGCTGATTATAATAATTATGGCTTTGGCGCAACAGTTGATATACCTCTTGATACATCAACGGTATGCATATAATTGAGATTGTTGAAATCCTCAGTTTTTTTTTTCTTTCCATTTATAATGTATTTGCATGTATTCTTGCAAGAATCGAACTGAGGTTTTTTCGAATTATTATCCATTTCAATATTAGGATTTGAAAAAGAAGGAGAAGGAACTCCAATCCAAGGAGGCTGATTTGAGAAGAAGGGAACAGGTATACAATGGGATTTCTTTGTGTCTTTTTGTTCACTTTAGGTTGAGAGTTCCCTCAGTGGATATTTACCGAGATTGGAACATTTGTACTGCTGATGCTCTCCTCTGTTTTCATTTCTCATTTCTTCTCACCCCTTCCATATCCATATTTCTGTTTGAGAAGTCTTCAATTTCTCCATCATATAACATTGATTCTTGATTTGATTCTCTTGCTTTCTTTCTTGTTAACACTGAAAGACATATACTTTTGAGAGTTATAATTGGAAAAGTCATTAAGAAAAACATTTCCATCTTTCTGTTTGAGAAGTCTTAAATAGCTGGTAAAGAATATATTGATTATATTAGCGACCCATTTGGTTAATTGCGAAATTGGTCTTAAATTAACATATATATATAGGTTGAGGGTGCATTTAGTCCGAGGGAAAGTCCTGAAACTTTCAAGTTTTGCCATTTAATAACATTTTGTGGAATATAAATTTTAAATTTCCAACTATTGAATAATGATATTAACATGATTATCATGCACACTACGTTTTAGATAAAATTAGACATTGATAGGTATGCAATTTTATAGTTTTTATTTACTTATATTTTAAATTTTTTGTTATATGTTAAAATGAAGTTGCCTGATGGAATATTATTTAGTTTTAAAATTGTATGAAATTTGGAATGCTTGATATTCTTAAAGAGAATTACAATGGTTGGATTAATAAAATTCCACTATTAGAAATTAGAAATAATAACAAATTATATAGAGTAAGTTTAACAAGACTTACTCCTGAAATAAGTGGATCCTATTCATGCATTCGTTCATGTATGCACCAAGAATCTGATTGTTTTATATCATTTCTGAAGTTTGGACGTGATGACAGAATCTAAAATTGTTACAATCCGAAATTAGGTTGATCTCTGGAAATGTGTATCTTAAATAAACGCTTCTCATTAAATCACGCTGTCTTCTATTTAATATGTTTAGAATGTGCATATTGATGTTCAGTTAACTTTGCCTGCATAAGGGTTTATCAACTTACTTTCATGCTAATTACAAGTATCTAGAAATTCACAGGCATCTTTTATTTATTTCTTTATTTATTTATCCAAATGCAGGAAGTGAGACGAAAAGAAGAAGCTGCTGCACGAGGTAAATTACATTACCCGTATTTATATTTGTTTCAGAATGATTTAGTAGTTTTTTTGTATATTTTTTTTTTAAATTTAATTGTTTAAATTGCTATTACTGTTTGAGGTGGCTTTTTTTGTTTCTGTTGACATTCAATTGAATTGTCCTGCAGAATTTTATTAAGGTCTTTGAAGTTTGAATATTTTGCACTAATTTAGTCCTGCTTGGCTCTTTTTGTTTCTGTTGATATTCAATTGAATACTGCAGAATTTTATAAATGTCTTTGAAGTTTGAACCTTCTCTACAAATTTAGTTCTGCTTAATTCTTCTAATAGGCATTGACATTTTGTTTTGCAGCTGGAATTGTTCTTGAGGAAAAGAATTGGCCGCCATTTTTCCCAATTATCCATCACGACATTGCTAATGAAATTCCGGTTCATCTTCAAAAATTGCAATATGTTGCATTTACTACATATTTGGGTATGTGATCCTCTTTATTGTTCTTGGTTCCAATTATGCCATTGGTTCTTGAGTATTGTGTTAGTCATTTTATATCGCGGCCACTGATTAAAAGCTGTATCATGCAGGACTAGTGGCGTGCCTATTGTGGAATGTTATAGCTGTTACTGCTGCTTGGATTAAGGGTGAAGGTGAGTTTAGATATGTAAAAGAAGTTTTTTTTTTTGGTCTAGTAGCAAGTGGCTAGAAATTCACCTCATAAGGTGAATAAGTGGGGAGTTCAGGGTTCAAACCCCGACTCCTGCATATTACATGCAATGTCCCTACTATCAATTGAGCTATGCTCATGGGGACTATAGAAGAAGGTTTTATTCAGTTATCTAACAATCAAATTTCGAATCTGACATTTCCTTATGCCATGTGCATGAAACATGGCTTTGTTTGACACAGGTGTAAAAATTTGGTTTCTGGCCATTATCTACTTCATATCAGGGGTACCTGGAGCATATGTTCTGTGGTATCGTCCATTATATCGTGTTTTTAGGTAAAAAAAAAATTGATGCTTTGCTCGTGCATTATTTTTTTTTTTAAATTAAGAAATTATGAGACTGCAACAAGTTGGGATTTCTATTATATAATTTAAGCCATACTCTTGATTCTAAATATGCACCTTTTTCATTGCAGGACAGAAAGTGCTCTGAAATTTGGATGGTTTTTCATGCTTTATCTGGTACATTGTTTATACTTGTTAATGTGCATAAGTTTTTTTTTTTTTTTTGACCAATTCATGTGCATAAGTTATGCTTAAAAAAACTGAAGAAATATAATCATCTTTGTTTCTTCTTCTGCTTACAGGTTCACATAGGATTCTGCATCTTAGCTGCTGTTGCTCCTCCTATAGTTTTCAAAGGAAAATCCCTGACGTACGCCAACTTACTCTACGCACTCAATTTAACTTGAAAATATTGCTTTTTTGACTACATTTTTGTGGCAAAGAGACAGCATTTAAATTTGTTTTCCTTGCAGAAGATAGGTTTACTTTCTAAAATAAAATTTAATGATGAATCTTTGAAAGAAAATTTGTAAACTTTGGTTTTTAATGTGTTTTTGTTCATATCTTCAAGTGACTGAAGTTATTATCATTTATATAATCTAATGTTGGCTCTATTTATTCACACTGATACAGGGGTATTCTATCTGCCATAGATGTGATAGACAACTCTACTTTGATTGGGGTAAGAATACTATTTAACTGTCAAATTTTGTTGCACATCTGTTTGTTGCACGTCTGTTAGTACACAATCTTATTCCAAATATTGCAAATGTGACCAAAGCAAACTTCTGAATTGTTTGATTTTCTGCATTTGCTTGTAGATTTTCTACTTCATTGGATTTGGATTTTTCTGCCTGGAAACGTTGATAAGCATTTGGGTTATTCAGGTCTGGTTACACTTTTGCTAAGTTTCCGTTTATCTTTAAGCTCATTCAGTTAGCATTTAAAAGCCATGATTTTCTTACAATGCATAGCTGCTCACTTTTTCTTTGGCTGGAATACAGCAAGTATACATGTACTTCCGCGGAAGTGGTAAGGCTGCTGAGATGAAACGGGACGTTGCAAGGGGAGCAGTGAGAGCTGCATTCTGA

Protein sequence

>MS.gene052533.t1

MAGRYDSNPFDEEEVNPFSEPAARGKTSSQSNYSGGAFYTTNPGSVPPAKNSRLSPLEPEPADYNNYGFGATVDIPLDTSTDLKKKEKELQSKEADLRRREQEVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPVHLQKLQYVAFTTYLGLVACLLWNVIAVTAAWIKGEGVKIWFLAIIYFISGVPGAYVLWYRPLYRVFRTESALKFGWFFMLYLVHIGFCILAAVAPPIVFKGKSLTGILSAIDVIDNSTLIGIFYFIGFGFFCLETLISIWVIQQVYMYFRGSGKAAEMKRDVARGAVRAAF