AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066423


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066423.t1 MTR_8g030880 97.059 306 9 0 1 306 1 306 0.0 616
MS.gene066423.t1 MTR_7g077670 76.144 306 72 1 1 306 2 306 7.42e-173 481
MS.gene066423.t1 MTR_1g034140 32.075 318 188 9 9 309 26 332 1.47e-43 152
MS.gene066423.t1 MTR_4g011720 31.273 275 183 3 29 303 35 303 7.38e-41 144
MS.gene066423.t1 MTR_2g083030 32.130 277 172 6 2 274 34 298 2.08e-40 144
MS.gene066423.t1 MTR_7g451860 32.491 277 154 7 9 269 40 299 2.35e-39 141
MS.gene066423.t1 MTR_7g047670 32.491 277 154 7 9 269 40 299 2.35e-39 141
MS.gene066423.t1 MTR_4g011690 30.519 308 198 7 10 307 9 310 1.22e-38 139
MS.gene066423.t1 MTR_1g102070 32.903 310 186 8 6 302 60 360 1.23e-38 140
MS.gene066423.t1 MTR_5g005570 32.714 269 161 9 9 269 36 292 2.21e-38 138
MS.gene066423.t1 MTR_5g025090 32.192 292 178 7 10 296 5 281 4.32e-38 137
MS.gene066423.t1 MTR_4g087100 30.030 333 193 12 2 309 23 340 2.51e-37 136
MS.gene066423.t1 MTR_3g088745 29.814 322 195 8 1 302 27 337 7.43e-37 135
MS.gene066423.t1 MTR_6g464620 32.704 318 181 11 6 302 60 365 1.40e-36 135
MS.gene066423.t1 MTR_4g074130 30.112 269 168 7 3 262 33 290 2.88e-36 133
MS.gene066423.t1 MTR_4g087110 29.755 326 195 11 6 309 27 340 4.67e-36 133
MS.gene066423.t1 MTR_8g033380 31.132 318 185 10 6 302 50 354 2.91e-35 131
MS.gene066423.t1 MTR_2g102570 29.010 293 195 6 10 296 52 337 3.26e-34 128
MS.gene066423.t1 MTR_2g437380 32.090 268 158 9 9 262 49 306 4.36e-34 128
MS.gene066423.t1 MTR_5g027230 28.667 300 192 6 10 303 6 289 1.39e-33 125
MS.gene066423.t1 MTR_8g093930 26.384 307 209 7 8 302 45 346 1.81e-33 126
MS.gene066423.t1 MTR_4g087090 32.014 278 161 10 1 260 26 293 4.57e-33 125
MS.gene066423.t1 MTR_3g040410 32.423 293 166 9 20 300 23 295 5.27e-33 124
MS.gene066423.t1 MTR_1g034120 28.012 332 203 13 2 309 23 342 8.21e-33 124
MS.gene066423.t1 MTR_7g062580 30.435 299 181 12 9 294 54 338 1.37e-32 124
MS.gene066423.t1 MTR_4g021380 30.503 318 190 8 9 305 6 313 1.40e-32 123
MS.gene066423.t1 MTR_3g096500 28.076 317 187 7 11 302 67 367 1.54e-32 124
MS.gene066423.t1 MTR_1g011580 28.814 295 197 7 10 302 63 346 1.58e-32 124
MS.gene066423.t1 MTR_1g081840 29.870 308 193 8 11 302 54 354 1.88e-32 124
MS.gene066423.t1 MTR_7g062570 29.054 296 189 11 9 294 54 338 2.41e-32 123
MS.gene066423.t1 MTR_7g062550 30.717 293 188 9 9 294 59 343 3.48e-32 123
MS.gene066423.t1 MTR_5g025050 28.522 291 190 6 10 296 5 281 3.63e-32 121
MS.gene066423.t1 MTR_4g087120 28.086 324 201 9 6 308 27 339 4.30e-32 122
MS.gene066423.t1 MTR_2g083000 30.325 277 158 9 6 269 34 288 7.29e-32 121
MS.gene066423.t1 MTR_4g100600 29.276 304 193 9 8 296 7 303 7.57e-32 121
MS.gene066423.t1 MTR_8g075830 31.203 266 167 6 2 260 36 292 8.45e-32 122
MS.gene066423.t1 MTR_5g055690 30.323 310 180 13 2 294 41 331 1.66e-31 120
MS.gene066423.t1 MTR_1g011600 29.851 268 175 6 27 288 36 296 2.27e-31 119
MS.gene066423.t1 MTR_2g070870 29.653 317 183 10 10 306 28 324 3.00e-31 119
MS.gene066423.t1 MTR_3g092890 28.866 291 190 7 9 292 37 317 4.22e-31 119
MS.gene066423.t1 MTR_0009s0050 29.934 304 192 10 1 294 38 330 4.41e-31 119
MS.gene066423.t1 MTR_0009s0050 29.934 304 192 10 1 294 38 330 4.66e-31 119
MS.gene066423.t1 MTR_1g034060 28.529 333 200 14 2 309 23 342 5.29e-31 119
MS.gene066423.t1 MTR_6g088665 28.125 320 187 10 10 299 21 327 6.81e-31 119
MS.gene066423.t1 MTR_6g088665 28.037 321 187 10 10 299 21 328 9.95e-31 118
MS.gene066423.t1 MTR_5g024940 27.000 300 182 7 10 304 6 273 2.54e-30 116
MS.gene066423.t1 MTR_8g102600 28.125 320 187 11 10 299 12 318 4.11e-30 116
MS.gene066423.t1 MTR_5g065010 29.412 306 196 8 6 303 40 333 4.55e-30 116
MS.gene066423.t1 MTR_4g015790 27.517 298 196 8 8 292 60 350 6.99e-30 117
MS.gene066423.t1 MTR_7g090520 27.000 300 193 9 10 295 10 297 7.49e-30 115
MS.gene066423.t1 MTR_7g056347 27.815 302 193 9 6 295 68 356 7.70e-30 116
MS.gene066423.t1 MTR_4g087140 28.283 297 175 11 27 299 52 334 8.38e-30 116
MS.gene066423.t1 MTR_3g070860 28.115 313 192 10 2 295 42 340 9.49e-30 116
MS.gene066423.t1 MTR_3g108520 28.105 306 192 6 8 295 5 300 1.19e-29 115
MS.gene066423.t1 MTR_8g024120 27.946 297 196 8 2 292 39 323 3.95e-29 114
MS.gene066423.t1 MTR_4g100590 28.618 304 190 8 8 296 7 298 7.21e-29 113
MS.gene066423.t1 MTR_7g062600 29.605 304 189 10 1 294 47 335 1.43e-28 113
MS.gene066423.t1 MTR_8g009110 28.247 308 197 10 1 297 56 350 1.83e-28 112
MS.gene066423.t1 MTR_3g091350 29.924 264 169 6 1 258 55 308 2.27e-28 112
MS.gene066423.t1 MTR_1g070120 28.621 290 192 7 10 292 38 319 4.17e-28 111
MS.gene066423.t1 MTR_7g063730 29.371 286 185 9 22 300 78 353 1.23e-27 110
MS.gene066423.t1 MTR_8g075890 28.358 268 172 6 2 260 36 292 1.53e-27 110
MS.gene066423.t1 MTR_4g021360 27.157 313 207 8 6 306 8 311 1.88e-27 109
MS.gene066423.t1 MTR_2g025120 26.645 304 191 11 4 295 3 286 2.35e-27 108
MS.gene066423.t1 MTR_5g048470 33.333 282 163 13 2 272 47 314 3.73e-27 109
MS.gene066423.t1 MTR_5g055680 27.393 303 201 10 1 294 38 330 4.31e-27 108
MS.gene066423.t1 MTR_7g068650 26.948 308 201 9 3 295 47 345 4.93e-27 108
MS.gene066423.t1 MTR_5g032870 28.197 305 193 8 3 294 36 327 5.70e-27 108
MS.gene066423.t1 MTR_3g083370 25.237 317 202 11 3 308 2 294 8.11e-27 107
MS.gene066423.t1 MTR_5g082750 29.316 307 189 11 3 295 47 339 8.23e-27 108
MS.gene066423.t1 MTR_1g086550 27.157 313 183 8 8 292 18 313 8.56e-27 108
MS.gene066423.t1 MTR_8g028435 29.206 315 182 10 2 297 57 349 1.09e-26 108
MS.gene066423.t1 MTR_2g068960 28.896 308 189 8 4 296 62 354 1.09e-26 108
MS.gene066423.t1 MTR_4g096840 27.184 309 187 10 4 292 23 313 1.16e-26 107
MS.gene066423.t1 MTR_2g072890 30.249 281 168 12 8 274 50 316 1.38e-26 107
MS.gene066423.t1 MTR_5g032880 26.159 302 197 8 2 294 35 319 1.79e-26 109
MS.gene066423.t1 MTR_5g032880 27.597 308 209 7 3 303 374 674 2.25e-26 109
MS.gene066423.t1 MTR_8g064200 32.270 282 170 11 1 272 43 313 1.82e-26 107
MS.gene066423.t1 MTR_2g019370 26.852 324 191 11 10 306 28 332 1.97e-26 107
MS.gene066423.t1 MTR_2g069090 29.276 304 184 11 6 295 69 355 2.05e-26 107
MS.gene066423.t1 MTR_2g069060 28.431 306 179 8 4 292 48 330 2.17e-26 107
MS.gene066423.t1 MTR_8g064200 32.270 282 170 11 1 272 48 318 2.23e-26 107
MS.gene066423.t1 MTR_3g045230 29.766 299 180 8 10 295 56 337 2.29e-26 107
MS.gene066423.t1 MTR_0328s0030 28.808 302 198 9 1 294 36 328 2.44e-26 107
MS.gene066423.t1 MTR_2g068950 28.247 308 191 8 4 296 62 354 2.50e-26 107
MS.gene066423.t1 MTR_3g026150 27.653 311 182 14 3 292 53 341 2.63e-26 107
MS.gene066423.t1 MTR_1g033810 29.225 284 162 9 1 264 38 302 5.50e-26 105
MS.gene066423.t1 MTR_5g048850 27.184 309 192 12 1 293 38 329 8.11e-26 105
MS.gene066423.t1 MTR_8g009080 30.719 306 176 12 6 295 95 380 9.05e-26 106
MS.gene066423.t1 MTR_5g055820 27.922 308 188 13 2 293 41 330 9.19e-26 105
MS.gene066423.t1 MTR_5g085330 26.471 306 197 10 1 295 1 289 1.05e-25 104
MS.gene066423.t1 MTR_5g055900 27.063 303 202 10 1 294 38 330 1.37e-25 104
MS.gene066423.t1 MTR_8g093980 27.036 307 203 8 6 301 60 356 1.42e-25 105
MS.gene066423.t1 MTR_3g091360 28.155 309 199 8 1 300 48 342 1.46e-25 104
MS.gene066423.t1 MTR_3g464530 29.538 325 168 14 10 307 34 324 1.99e-25 103
MS.gene066423.t1 MTR_3g117420 30.137 292 176 12 10 286 52 330 2.64e-25 103
MS.gene066423.t1 MTR_4g011720 32.524 206 131 4 29 233 35 233 2.66e-25 102
MS.gene066423.t1 MTR_0009s0480 30.970 268 168 10 1 260 37 295 3.31e-25 103
MS.gene066423.t1 MTR_4g087130 26.687 326 205 8 6 308 27 341 3.77e-25 103
MS.gene066423.t1 MTR_8g008930 28.247 308 191 10 2 295 57 348 4.52e-25 103
MS.gene066423.t1 MTR_7g045650 30.702 228 143 8 24 245 76 294 5.63e-25 102
MS.gene066423.t1 MTR_5g059130 29.054 296 190 8 8 293 42 327 5.83e-25 102
MS.gene066423.t1 MTR_2g072910 29.057 265 167 9 8 261 49 303 7.03e-25 103
MS.gene066423.t1 MTR_8g063070 28.244 262 173 6 4 261 66 316 9.12e-25 102
MS.gene066423.t1 MTR_5g048550 29.851 268 167 10 2 260 41 296 1.09e-24 102
MS.gene066423.t1 MTR_2g069010 28.395 324 182 11 4 302 68 366 1.19e-24 102
MS.gene066423.t1 MTR_5g025060 26.144 306 166 8 10 302 6 264 1.38e-24 100
MS.gene066423.t1 MTR_8g009090 28.832 274 161 8 2 261 57 310 1.43e-24 102
MS.gene066423.t1 MTR_5g048740 28.477 302 198 10 1 293 36 328 1.76e-24 101
MS.gene066423.t1 MTR_1g070080 27.425 299 190 8 9 294 37 321 1.87e-24 101
MS.gene066423.t1 MTR_2g069020 29.503 322 178 12 4 302 66 361 2.14e-24 102
MS.gene066423.t1 MTR_3g058610 26.866 268 176 6 2 260 36 292 2.89e-24 101
MS.gene066423.t1 MTR_4g117880 28.662 314 186 11 6 301 61 354 3.10e-24 101
MS.gene066423.t1 MTR_2g069020 29.814 322 177 12 4 302 66 361 3.22e-24 101
MS.gene066423.t1 MTR_3g043900 28.859 298 183 8 10 295 56 336 3.81e-24 100
MS.gene066423.t1 MTR_1g070085 27.551 294 193 7 10 293 37 320 5.69e-24 100
MS.gene066423.t1 MTR_1g070085 27.551 294 193 7 10 293 37 320 5.69e-24 100
MS.gene066423.t1 MTR_8g009160 27.796 313 185 11 2 295 57 347 1.00e-23 99.8
MS.gene066423.t1 MTR_3g088565 26.263 297 194 10 10 293 3 287 1.06e-23 99.0
MS.gene066423.t1 MTR_4g123020 26.644 289 203 7 10 294 20 303 1.16e-23 99.0
MS.gene066423.t1 MTR_2g033270 24.667 300 197 8 8 294 17 300 1.47e-23 99.0
MS.gene066423.t1 MTR_7g102720 28.283 297 183 7 10 293 37 316 1.91e-23 98.6
MS.gene066423.t1 MTR_5g048570 26.014 296 200 10 8 294 43 328 2.06e-23 99.0
MS.gene066423.t1 MTR_5g022020 27.612 268 174 7 2 260 36 292 2.31e-23 99.0
MS.gene066423.t1 MTR_8g074050 30.519 308 187 12 10 303 52 346 4.04e-23 98.2
MS.gene066423.t1 MTR_1g093110 28.981 314 168 10 6 293 71 355 4.10e-23 98.2
MS.gene066423.t1 MTR_8g461330 27.974 311 180 10 8 294 25 315 4.61e-23 97.8
MS.gene066423.t1 MTR_2g069190 27.575 301 192 9 6 295 69 354 4.74e-23 98.2
MS.gene066423.t1 MTR_3g063180 27.778 306 199 9 3 293 35 333 7.65e-23 97.4
MS.gene066423.t1 MTR_7g081710 26.384 307 204 9 10 304 49 345 1.13e-22 96.7
MS.gene066423.t1 MTR_5g059140 28.016 257 175 4 10 260 42 294 1.27e-22 96.3
MS.gene066423.t1 MTR_1g093140 29.739 306 159 12 6 284 74 350 1.32e-22 97.1
MS.gene066423.t1 MTR_1g093120 29.592 294 177 11 4 284 66 342 1.39e-22 96.7
MS.gene066423.t1 MTR_8g074070 28.803 309 190 13 10 301 52 347 1.85e-22 96.3
MS.gene066423.t1 MTR_1g070135 26.531 294 193 9 10 292 38 319 2.22e-22 95.9
MS.gene066423.t1 MTR_4g116010 32.210 267 161 7 3 260 43 298 2.63e-22 95.9
MS.gene066423.t1 MTR_6g015950 27.972 286 182 8 10 284 39 311 3.36e-22 95.1
MS.gene066423.t1 MTR_4g024660 30.403 273 153 10 4 261 66 316 3.47e-22 95.9
MS.gene066423.t1 MTR_2g068840 29.617 287 175 9 9 279 54 329 3.62e-22 95.5
MS.gene066423.t1 MTR_8g009170 27.010 311 191 9 2 295 57 348 5.77e-22 95.1
MS.gene066423.t1 MTR_5g055800 29.000 300 197 9 1 293 38 328 7.76e-22 94.4
MS.gene066423.t1 MTR_7g102820 26.748 329 197 11 8 307 65 378 9.20e-22 94.7
MS.gene066423.t1 MTR_5g055690 31.325 249 135 13 2 233 41 270 1.56e-21 92.4
MS.gene066423.t1 MTR_2g437380 30.556 216 132 8 55 262 7 212 1.81e-21 92.0
MS.gene066423.t1 MTR_5g011250 26.959 319 203 11 6 308 48 352 1.82e-21 93.6
MS.gene066423.t1 MTR_1g062110 25.714 315 201 8 8 303 64 364 4.13e-21 92.8
MS.gene066423.t1 MTR_7g016090 26.056 284 189 8 10 284 39 310 8.63e-21 91.3
MS.gene066423.t1 MTR_1g032250 27.010 311 180 12 5 293 68 353 8.64e-21 91.7
MS.gene066423.t1 MTR_7g016090 26.056 284 189 8 10 284 41 312 9.20e-21 91.3
MS.gene066423.t1 MTR_3g072820 28.295 258 175 7 8 260 40 292 6.53e-20 89.0
MS.gene066423.t1 MTR_2g069210 28.772 285 173 11 24 295 83 350 7.51e-20 89.0
MS.gene066423.t1 MTR_1g032220 27.303 304 188 12 5 293 68 353 7.93e-20 89.0
MS.gene066423.t1 MTR_7g105070 27.473 273 168 11 2 260 51 307 1.69e-19 88.2
MS.gene066423.t1 MTR_7g062560 26.230 305 186 10 10 300 62 341 1.96e-19 87.8
MS.gene066423.t1 MTR_2g068800 27.843 255 143 7 9 250 54 280 2.47e-19 86.3
MS.gene066423.t1 MTR_8g074070 28.713 303 179 12 10 301 52 328 2.54e-19 87.0
MS.gene066423.t1 MTR_0009s0480 30.290 241 151 10 1 233 37 268 2.71e-19 85.9
MS.gene066423.t1 MTR_8g102600 26.642 274 158 11 56 299 8 268 2.99e-19 86.3
MS.gene066423.t1 MTR_4g132770 37.500 120 71 3 179 295 39 157 3.67e-19 83.2
MS.gene066423.t1 MTR_8g062600 28.102 274 154 8 6 261 68 316 4.51e-19 87.0
MS.gene066423.t1 MTR_4g093840 27.302 315 183 10 10 300 62 354 6.09e-19 86.7
MS.gene066423.t1 MTR_0009s0050 31.915 188 117 6 110 294 53 232 8.88e-19 84.3
MS.gene066423.t1 MTR_6g035160 34.752 141 84 3 164 298 32 170 8.96e-19 82.4
MS.gene066423.t1 MTR_0009s0050 31.915 188 117 6 110 294 53 232 9.34e-19 84.3
MS.gene066423.t1 MTR_5g048850 28.112 249 146 12 1 233 38 269 1.16e-18 84.3
MS.gene066423.t1 MTR_1g032140 39.316 117 68 3 179 293 231 346 1.34e-18 85.5
MS.gene066423.t1 MTR_1g070185 28.617 311 183 11 10 302 69 358 1.75e-18 85.1
MS.gene066423.t1 MTR_2g072910 28.333 240 151 9 8 236 49 278 1.86e-18 84.0
MS.gene066423.t1 MTR_8g041620 27.341 267 168 9 8 261 66 319 2.29e-18 85.1
MS.gene066423.t1 MTR_3g072810 25.817 306 199 8 8 300 38 328 2.36e-18 84.3
MS.gene066423.t1 MTR_2g069300 26.733 303 190 11 10 295 54 341 2.46e-18 84.7
MS.gene066423.t1 MTR_2g069060 30.677 251 141 11 4 241 26 256 2.64e-18 83.2
MS.gene066423.t1 MTR_3g117485 25.694 288 193 9 10 284 49 328 2.80e-18 84.3
MS.gene066423.t1 MTR_3g026150 28.866 194 113 8 110 293 61 239 4.42e-18 82.4
MS.gene066423.t1 MTR_8g041600 27.338 278 154 12 8 261 66 319 5.60e-18 84.0
MS.gene066423.t1 MTR_8g009120 26.490 302 192 10 2 295 57 336 5.74e-18 83.6
MS.gene066423.t1 MTR_0009s0050 36.752 117 72 2 179 294 35 150 6.53e-18 80.1
MS.gene066423.t1 MTR_2g025120 26.923 234 154 9 4 233 3 223 7.33e-18 81.3
MS.gene066423.t1 MTR_8g009180 36.691 139 77 4 168 302 154 285 1.43e-17 81.6
MS.gene066423.t1 MTR_7g056393 27.815 302 197 7 4 295 66 356 1.46e-17 82.4
MS.gene066423.t1 MTR_1g043770 27.106 273 161 7 4 261 52 301 1.88e-17 82.0
MS.gene066423.t1 MTR_7g078010 28.939 311 178 11 4 293 66 354 2.53e-17 82.0
MS.gene066423.t1 MTR_0032s0040 24.667 300 207 10 9 298 69 359 2.71e-17 81.6
MS.gene066423.t1 MTR_7g029655 27.740 292 169 13 10 287 67 330 2.76e-17 81.6
MS.gene066423.t1 MTR_1g070110 38.983 118 66 2 182 294 100 216 3.01e-17 79.7
MS.gene066423.t1 MTR_3g026150 28.685 251 138 12 3 233 53 282 3.35e-17 80.5
MS.gene066423.t1 MTR_3g040440 47.761 67 34 1 183 249 16 81 3.46e-17 80.1
MS.gene066423.t1 MTR_0009s0400 37.607 117 71 2 179 294 11 126 3.66e-17 77.4
MS.gene066423.t1 MTR_8g469400 32.086 187 107 6 117 293 165 341 7.79e-17 80.5
MS.gene066423.t1 MTR_1g048940 24.351 308 205 10 7 299 42 336 1.13e-16 79.7
MS.gene066423.t1 MTR_4g100600 27.948 229 144 8 8 221 7 229 1.26e-16 77.8
MS.gene066423.t1 MTR_0056s0160 33.987 153 92 5 110 260 36 181 2.61e-16 77.0
MS.gene066423.t1 MTR_8g009080 30.041 243 137 10 6 235 95 317 3.59e-16 78.2
MS.gene066423.t1 MTR_1g070085 29.348 184 124 4 110 293 65 242 3.89e-16 77.0
MS.gene066423.t1 MTR_3g083370 23.140 242 155 9 3 233 2 223 4.32e-16 76.3
MS.gene066423.t1 MTR_1g070100 29.775 178 119 4 110 287 61 232 7.32e-16 76.3
MS.gene066423.t1 MTR_1g043760 26.316 266 168 7 6 261 55 302 2.16e-15 76.3
MS.gene066423.t1 MTR_8g009170 27.642 246 145 8 2 233 57 283 2.45e-15 75.5
MS.gene066423.t1 MTR_3g464530 29.148 223 125 9 27 233 47 252 4.15e-15 73.9
MS.gene066423.t1 MTR_1g027290 24.847 326 188 11 9 302 28 328 4.87e-15 75.1
MS.gene066423.t1 MTR_1g043840 45.570 79 42 1 183 261 108 185 6.72e-15 74.7
MS.gene066423.t1 MTR_8g006930 26.821 302 196 9 4 293 66 354 8.69e-15 74.3
MS.gene066423.t1 MTR_1g043810 25.940 266 167 8 10 261 54 303 9.07e-15 74.3
MS.gene066423.t1 MTR_3g117485 24.710 259 180 8 33 284 6 256 9.25e-15 73.6
MS.gene066423.t1 MTR_4g100590 26.562 256 161 8 56 296 8 251 1.62e-14 72.4
MS.gene066423.t1 MTR_7g016080 24.542 273 174 10 10 272 41 291 3.03e-14 72.4
MS.gene066423.t1 MTR_1g043775 27.407 270 158 10 10 261 54 303 3.84e-14 72.4
MS.gene066423.t1 MTR_7g056353 34.459 148 83 4 118 261 153 290 6.42e-14 72.4
MS.gene066423.t1 MTR_1g070135 25.957 235 151 9 10 233 38 260 1.18e-13 70.5
MS.gene066423.t1 MTR_4g119410 25.753 299 203 7 4 293 66 354 3.88e-13 69.7
MS.gene066423.t1 MTR_8g009150 31.298 131 73 3 182 295 198 328 3.88e-12 66.6
MS.gene066423.t1 MTR_8g041600 26.000 250 137 12 8 233 66 291 7.97e-12 65.1
MS.gene066423.t1 MTR_4g100610 27.273 220 130 7 8 205 7 218 8.52e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066423.t1 AT4G23340 56.270 311 125 5 1 306 1 305 4.08e-121 350
MS.gene066423.t1 AT5G51310 51.282 312 135 6 8 306 3 310 8.05e-111 324
MS.gene066423.t1 AT4G23340 61.376 189 67 3 122 306 1 187 9.00e-81 244
MS.gene066423.t1 AT1G80330 31.650 297 185 7 10 296 49 337 1.95e-42 150
MS.gene066423.t1 AT4G25420 32.039 309 190 8 8 302 59 361 1.95e-39 142
MS.gene066423.t1 AT1G52820 29.043 303 200 6 10 303 12 308 9.95e-39 139
MS.gene066423.t1 AT5G51810 30.421 309 195 9 6 302 59 359 6.04e-38 138
MS.gene066423.t1 AT1G55290 34.000 300 165 11 10 294 62 343 1.55e-36 134
MS.gene066423.t1 AT4G21200 33.210 271 158 9 8 269 40 296 1.69e-36 134
MS.gene066423.t1 AT1G15550 29.195 298 195 7 9 299 56 344 3.47e-36 133
MS.gene066423.t1 AT3G19010 29.721 323 187 11 9 306 27 334 3.30e-35 130
MS.gene066423.t1 AT3G19010 29.721 323 187 11 9 306 27 334 3.30e-35 130
MS.gene066423.t1 AT5G07200 30.063 316 191 10 8 302 56 362 4.71e-34 128
MS.gene066423.t1 AT3G13610 32.441 299 173 9 10 295 62 344 1.08e-33 127
MS.gene066423.t1 AT1G60980 31.677 322 187 10 2 302 49 358 1.33e-33 127
MS.gene066423.t1 AT1G50960 31.955 266 157 9 8 262 38 290 1.74e-32 123
MS.gene066423.t1 AT1G52790 31.186 295 186 8 10 295 5 291 2.72e-32 122
MS.gene066423.t1 AT3G21420 31.250 304 172 13 10 292 55 342 3.08e-32 123
MS.gene066423.t1 AT1G44090 31.310 313 186 12 8 301 61 363 4.67e-32 123
MS.gene066423.t1 AT3G19000 29.483 329 190 11 2 306 29 339 2.15e-31 120
MS.gene066423.t1 AT4G21690 32.331 266 155 8 10 260 47 302 3.45e-31 120
MS.gene066423.t1 AT1G30040 26.712 292 195 8 10 292 31 312 5.17e-31 119
MS.gene066423.t1 AT1G80340 29.630 297 193 7 10 299 50 337 5.58e-31 119
MS.gene066423.t1 AT1G78550 30.201 298 181 10 9 292 52 336 8.42e-31 119
MS.gene066423.t1 AT2G34555 28.094 299 185 6 8 292 25 307 8.80e-31 118
MS.gene066423.t1 AT2G38240 28.475 295 192 8 8 292 46 331 7.65e-30 116
MS.gene066423.t1 AT1G52800 26.441 295 201 6 1 287 1 287 9.38e-30 115
MS.gene066423.t1 AT4G03070 28.896 308 200 7 10 306 14 313 2.31e-29 114
MS.gene066423.t1 AT3G55970 30.033 303 185 9 10 295 52 344 4.80e-29 114
MS.gene066423.t1 AT1G78440 27.848 316 199 8 10 307 18 322 3.41e-28 111
MS.gene066423.t1 AT1G80320 29.630 297 195 8 10 298 9 299 5.74e-28 110
MS.gene066423.t1 AT5G08640 28.094 299 206 6 6 300 39 332 1.42e-27 110
MS.gene066423.t1 AT5G08640 28.094 299 206 6 6 300 39 332 1.42e-27 110
MS.gene066423.t1 AT1G17020 30.712 267 160 10 8 260 51 306 2.00e-27 110
MS.gene066423.t1 AT3G19010 27.796 313 176 11 9 306 27 304 2.60e-27 108
MS.gene066423.t1 AT5G05600 27.707 314 197 11 8 303 60 361 3.24e-27 109
MS.gene066423.t1 AT4G25300 29.630 270 167 10 1 260 48 304 4.60e-27 108
MS.gene066423.t1 AT3G11180 28.065 310 197 10 8 303 93 390 5.42e-27 109
MS.gene066423.t1 AT1G47990 28.239 301 188 9 9 294 14 301 1.05e-26 107
MS.gene066423.t1 AT3G11180 27.907 301 192 9 8 295 93 381 2.60e-26 107
MS.gene066423.t1 AT3G46500 27.152 302 199 7 10 296 17 312 3.07e-26 106
MS.gene066423.t1 AT1G05010 29.043 303 189 13 4 295 3 290 5.09e-26 105
MS.gene066423.t1 AT1G77330 27.419 310 187 13 10 300 3 293 5.92e-26 105
MS.gene066423.t1 AT3G51240 27.547 265 178 5 2 260 35 291 1.09e-25 105
MS.gene066423.t1 AT1G62380 25.574 305 188 11 5 295 7 286 2.97e-25 103
MS.gene066423.t1 AT3G50210 28.125 288 161 9 10 261 8 285 4.65e-25 103
MS.gene066423.t1 AT3G50210 28.125 288 161 9 10 261 8 285 4.65e-25 103
MS.gene066423.t1 AT3G50210 28.125 288 161 9 10 261 8 285 4.65e-25 103
MS.gene066423.t1 AT4G10500 28.803 309 171 12 3 288 42 324 4.67e-25 103
MS.gene066423.t1 AT1G52820 28.821 229 150 5 10 231 12 234 5.98e-25 101
MS.gene066423.t1 AT5G63590 29.630 297 193 8 8 296 12 300 8.60e-25 102
MS.gene066423.t1 AT1G30040 27.468 233 150 8 10 233 31 253 1.13e-24 100
MS.gene066423.t1 AT5G58660 27.273 297 172 9 8 273 32 315 1.60e-24 102
MS.gene066423.t1 AT5G63600 26.117 291 200 7 8 293 31 311 1.60e-24 101
MS.gene066423.t1 AT5G63600 25.862 290 201 6 8 293 31 310 3.19e-24 100
MS.gene066423.t1 AT2G36690 27.365 296 177 10 8 284 59 335 3.35e-24 101
MS.gene066423.t1 AT2G36690 27.365 296 177 10 8 284 59 335 3.35e-24 101
MS.gene066423.t1 AT4G25310 31.950 241 139 11 30 260 76 301 3.36e-24 101
MS.gene066423.t1 AT1G06620 29.043 303 189 8 4 295 61 348 3.73e-24 101
MS.gene066423.t1 AT1G12010 24.272 309 195 11 1 295 3 286 4.17e-24 100
MS.gene066423.t1 AT5G20400 28.707 317 199 10 1 301 36 341 5.98e-24 100
MS.gene066423.t1 AT5G43450 30.605 281 158 9 10 276 61 318 7.99e-24 100
MS.gene066423.t1 AT5G51810 29.630 243 151 9 6 236 59 293 8.37e-24 99.0
MS.gene066423.t1 AT4G10490 26.578 301 199 9 3 294 40 327 1.24e-23 99.4
MS.gene066423.t1 AT1G17010 27.575 301 188 10 9 293 53 339 1.27e-23 99.8
MS.gene066423.t1 AT3G49620 28.777 278 167 8 10 261 34 306 1.48e-23 99.4
MS.gene066423.t1 AT3G49630 28.873 284 159 10 10 261 9 281 1.98e-23 98.6
MS.gene066423.t1 AT5G24530 26.846 298 194 9 9 294 37 322 1.99e-23 99.0
MS.gene066423.t1 AT3G19010 29.200 250 140 10 9 233 27 264 6.10e-23 96.7
MS.gene066423.t1 AT3G49630 29.249 253 151 8 27 261 35 277 6.70e-23 97.1
MS.gene066423.t1 AT1G02400 26.384 307 197 7 4 294 18 311 7.14e-23 97.1
MS.gene066423.t1 AT1G78550 28.839 267 167 9 36 292 5 258 8.32e-23 95.9
MS.gene066423.t1 AT5G43440 29.153 295 186 10 10 292 62 345 1.17e-22 97.1
MS.gene066423.t1 AT3G12900 31.095 283 158 10 27 293 76 337 1.24e-22 96.7
MS.gene066423.t1 AT3G19000 27.547 265 153 10 2 242 29 278 1.30e-22 95.5
MS.gene066423.t1 AT5G59530 29.000 300 186 10 6 292 59 344 1.48e-22 96.7
MS.gene066423.t1 AT4G25420 31.356 236 142 8 8 229 59 288 1.55e-22 95.5
MS.gene066423.t1 AT3G46500 27.068 266 173 7 10 260 17 276 2.85e-22 94.7
MS.gene066423.t1 AT1G03400 28.958 259 167 9 7 261 53 298 7.23e-22 94.7
MS.gene066423.t1 AT5G20550 29.097 299 190 10 1 286 36 325 1.43e-21 93.6
MS.gene066423.t1 AT3G60290 25.705 319 183 11 8 299 50 341 1.49e-21 94.0
MS.gene066423.t1 AT1G35190 26.367 311 197 7 10 296 12 314 1.66e-21 93.2
MS.gene066423.t1 AT1G28030 27.778 306 202 10 2 295 5 303 2.15e-21 92.8
MS.gene066423.t1 AT3G47190 26.537 309 172 12 8 292 30 307 2.47e-21 92.8
MS.gene066423.t1 AT5G54000 29.316 307 201 9 6 303 42 341 3.69e-21 92.4
MS.gene066423.t1 AT1G04380 28.475 295 189 9 10 294 45 327 7.18e-21 91.7
MS.gene066423.t1 AT5G07480 27.044 318 207 9 2 304 41 348 7.34e-21 92.0
MS.gene066423.t1 AT1G14130 27.273 286 188 7 8 287 7 278 8.35e-21 90.9
MS.gene066423.t1 AT1G03410 26.000 300 198 9 4 292 56 342 1.30e-20 91.3
MS.gene066423.t1 AT1G03410 26.000 300 198 9 4 292 93 379 1.59e-20 91.3
MS.gene066423.t1 AT2G44800 26.667 300 200 9 10 299 52 341 1.63e-20 90.9
MS.gene066423.t1 AT2G19590 25.962 312 202 11 8 307 9 303 2.52e-20 89.7
MS.gene066423.t1 AT5G12270 27.815 302 187 10 10 295 56 342 3.98e-20 89.7
MS.gene066423.t1 AT5G59540 27.946 297 198 9 6 295 62 349 4.13e-20 89.7
MS.gene066423.t1 AT3G61400 26.449 276 192 6 22 292 82 351 8.49e-20 89.0
MS.gene066423.t1 AT1G35190 25.723 311 176 9 10 296 12 291 9.59e-20 88.2
MS.gene066423.t1 AT3G55970 29.876 241 142 9 10 233 52 282 1.07e-19 87.8
MS.gene066423.t1 AT2G30840 29.008 262 172 7 6 262 58 310 1.17e-19 88.6
MS.gene066423.t1 AT2G30830 36.310 168 98 5 120 284 169 330 1.21e-19 88.6
MS.gene066423.t1 AT5G58660 26.667 255 144 8 8 232 32 273 1.51e-19 87.0
MS.gene066423.t1 AT3G46490 25.000 328 180 10 10 296 17 319 3.55e-19 86.7
MS.gene066423.t1 AT1G04350 27.778 270 179 7 1 261 44 306 4.18e-19 87.0
MS.gene066423.t1 AT1G14120 26.280 293 196 7 10 296 8 286 5.20e-19 85.9
MS.gene066423.t1 AT1G14120 26.280 293 196 7 10 296 8 286 5.20e-19 85.9
MS.gene066423.t1 AT1G14120 26.280 293 196 7 10 296 8 286 5.20e-19 85.9
MS.gene066423.t1 AT1G06650 25.667 300 205 10 4 295 63 352 1.25e-18 85.5
MS.gene066423.t1 AT1G49390 27.397 292 199 7 1 284 36 322 1.96e-18 84.7
MS.gene066423.t1 AT5G63595 27.165 254 151 7 9 256 24 249 2.24e-18 83.6
MS.gene066423.t1 AT4G22880 26.690 281 180 9 6 272 48 316 3.45e-18 84.3
MS.gene066423.t1 AT4G22880 26.690 281 180 9 6 272 48 316 3.45e-18 84.3
MS.gene066423.t1 AT4G22880 26.690 281 180 9 6 272 48 316 3.45e-18 84.3
MS.gene066423.t1 AT4G25310 28.992 238 122 10 30 260 76 273 4.83e-18 83.6
MS.gene066423.t1 AT5G43450 29.832 238 135 8 10 233 61 280 1.15e-17 82.0
MS.gene066423.t1 AT1G15540 25.581 301 204 9 9 297 8 300 1.60e-17 82.0
MS.gene066423.t1 AT1G15540 25.581 301 204 9 9 297 8 300 1.60e-17 82.0
MS.gene066423.t1 AT1G15540 25.581 301 204 9 9 297 15 307 1.70e-17 82.0
MS.gene066423.t1 AT5G43935 23.490 298 181 7 10 293 19 283 1.80e-17 81.3
MS.gene066423.t1 AT1G15540 25.581 301 204 9 9 297 11 303 1.93e-17 81.6
MS.gene066423.t1 AT5G54000 29.851 268 177 8 40 303 1 261 2.12e-17 80.9
MS.gene066423.t1 AT3G46490 25.342 292 152 10 10 260 17 283 3.77e-17 80.9
MS.gene066423.t1 AT1G03400 25.784 287 168 10 7 261 53 326 8.42e-17 80.5
MS.gene066423.t1 AT1G06640 25.325 308 196 9 4 295 63 352 1.05e-16 80.1
MS.gene066423.t1 AT4G16770 28.384 229 145 7 8 221 20 244 1.56e-16 78.2
MS.gene066423.t1 AT4G25300 34.459 148 83 6 118 260 72 210 1.99e-16 77.8
MS.gene066423.t1 AT4G03050 37.719 114 70 1 183 295 275 388 2.12e-16 79.3
MS.gene066423.t1 AT4G03050 37.719 114 70 1 183 295 275 388 2.12e-16 79.3
MS.gene066423.t1 AT1G06645 25.253 297 207 9 4 295 76 362 2.85e-16 79.0
MS.gene066423.t1 AT3G51240 31.788 151 94 3 116 260 60 207 6.13e-16 76.6
MS.gene066423.t1 AT1G52810 23.232 297 183 6 8 295 10 270 9.75e-16 76.6
MS.gene066423.t1 AT5G43440 29.114 237 148 9 10 237 62 287 9.96e-16 76.3
MS.gene066423.t1 AT3G46500 25.592 211 142 4 98 296 31 238 1.31e-15 75.5
MS.gene066423.t1 AT3G46500 25.592 211 142 4 98 296 31 238 1.31e-15 75.5
MS.gene066423.t1 AT1G06620 29.876 241 140 9 4 233 61 283 1.67e-15 75.9
MS.gene066423.t1 AT5G05600 26.337 243 150 10 8 233 60 290 1.77e-15 75.9
MS.gene066423.t1 AT5G63580 28.634 227 154 4 10 233 19 240 3.76e-15 74.3
MS.gene066423.t1 AT1G02400 25.000 248 158 6 4 236 18 252 4.42e-15 74.3
MS.gene066423.t1 AT4G16765 25.926 216 143 6 88 296 34 239 8.63e-15 73.2
MS.gene066423.t1 AT4G16765 25.926 216 143 6 88 296 34 239 8.63e-15 73.2
MS.gene066423.t1 AT4G16765 25.926 216 143 6 88 296 34 239 8.63e-15 73.2
MS.gene066423.t1 AT3G50210 32.450 151 93 4 116 261 57 203 8.82e-15 73.2
MS.gene066423.t1 AT5G07480 29.557 203 130 6 110 304 42 239 1.10e-14 72.8
MS.gene066423.t1 AT2G30840 28.017 232 154 6 6 233 58 280 1.23e-14 73.6
MS.gene066423.t1 AT5G63580 28.444 225 153 4 10 231 19 238 1.48e-14 72.4
MS.gene066423.t1 AT4G16765 28.333 180 112 6 88 260 34 203 1.64e-14 72.0
MS.gene066423.t1 AT3G61400 25.000 212 154 3 22 233 82 288 2.52e-14 72.4
MS.gene066423.t1 AT3G46500 28.261 184 118 5 117 296 3 176 6.85e-14 69.3
MS.gene066423.t1 AT3G49630 31.579 152 88 4 116 261 67 208 1.13e-13 70.1
MS.gene066423.t1 AT1G04380 28.755 233 147 8 10 235 45 265 1.54e-13 70.1
MS.gene066423.t1 AT1G49390 28.112 249 169 7 40 284 1 243 3.55e-13 68.9
MS.gene066423.t1 AT2G25450 24.903 257 185 5 6 261 56 305 4.56e-13 69.3
MS.gene066423.t1 AT5G59540 27.155 232 156 8 6 233 62 284 2.96e-12 66.2
MS.gene066423.t1 AT4G16765 29.688 128 85 2 173 296 67 193 3.82e-12 64.7
MS.gene066423.t1 AT3G46500 25.143 175 116 4 98 260 31 202 1.20e-11 63.9
MS.gene066423.t1 AT3G46480 30.508 118 77 2 183 296 156 272 3.17e-11 63.2

Find 42 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAATGAGAAAGTGATTT+TGG 0.189194 8.1:+72050018 MS.gene066423:CDS
AGATATCATGATTAATTATA+TGG 0.245651 8.1:-72048601 None:intergenic
TTTGAGAGTCTTAGAGTTGA+TGG 0.277374 8.1:+72048755 MS.gene066423:CDS
TGAAAACACATGAAGGAAAA+TGG 0.283049 8.1:+72049846 MS.gene066423:CDS
TTTCTAAAGCATGCAAAGAT+TGG 0.316745 8.1:+72048570 MS.gene066423:CDS
ATCTTATACCAAGATGAAAT+TGG 0.327780 8.1:+72049812 MS.gene066423:CDS
GAAAGAGTTGTTAAAGAAGA+TGG 0.335661 8.1:-72048551 None:intergenic
GGTTCAGAAATGTCTATAAT+AGG 0.339282 8.1:-72048521 None:intergenic
CCATCTCCAACAACTTCATT+TGG 0.346444 8.1:-72050043 None:intergenic
TTCTAAAGCATGCAAAGATT+GGG 0.355396 8.1:+72048571 MS.gene066423:CDS
ATCAACATAAGGATATGAAT+TGG 0.397199 8.1:-72048495 None:intergenic
TTAGCAGATACATAGAAGTT+AGG 0.429591 8.1:-72048779 None:intergenic
GAAGTCCTCCAATTTCATCT+TGG 0.437867 8.1:-72049820 None:intergenic
GAAGATCAAGTTGAAGGACT+TGG 0.452714 8.1:+72049761 MS.gene066423:CDS
GGGTCATTAGTGGTAAATAT+TGG 0.455513 8.1:+72049890 MS.gene066423:CDS
TTGGCACCAAATGAAGTTGT+TGG 0.459765 8.1:+72050037 MS.gene066423:CDS
AAGCTTGTGTTAATGAGCTT+AGG 0.470070 8.1:+72049641 MS.gene066423:CDS
TCCTTCTGAAGGGTCATTAG+TGG 0.488539 8.1:+72049880 MS.gene066423:CDS
TCAAAGAGGGAGGTTTGAAA+AGG 0.488736 8.1:+72050126 MS.gene066423:CDS
ACTCTAAGACTCTCAAAGAA+TGG 0.491173 8.1:-72048749 None:intergenic
AAATAATCTGAACACACAAA+AGG 0.494776 8.1:-72050085 None:intergenic
GATTTGGAAGATCAAGTTGA+AGG 0.498662 8.1:+72049755 MS.gene066423:CDS
CTTGGAGTAATGATAAGTTA+AGG 0.502992 8.1:+72049927 MS.gene066423:CDS
TTAGAGAGAATAATCAAAGA+GGG 0.507439 8.1:+72050113 MS.gene066423:CDS
CCAAATGAAGTTGTTGGAGA+TGG 0.511109 8.1:+72050043 MS.gene066423:CDS
GAGAGAATAATCAAAGAGGG+AGG 0.526357 8.1:+72050116 MS.gene066423:CDS
ATAATAGGAAGATCAACATA+AGG 0.531318 8.1:-72048506 None:intergenic
AGAGAACTATTGTAGTAAGA+TGG 0.543114 8.1:+72049595 MS.gene066423:CDS
TTTAGAGAGAATAATCAAAG+AGG 0.551873 8.1:+72050112 MS.gene066423:CDS
TCTAAAGCATGCAAAGATTG+GGG 0.552225 8.1:+72048572 MS.gene066423:CDS
TCTGATACTAAACTTAAACT+TGG 0.555324 8.1:+72048680 MS.gene066423:CDS
AGTTTAAGTTTAGTATCAGA+AGG 0.561095 8.1:-72048677 None:intergenic
CTTCAAGTGAAAACACATGA+AGG 0.568959 8.1:+72049839 MS.gene066423:CDS
ACCACTAATGACCCTTCAGA+AGG 0.570837 8.1:-72049881 None:intergenic
TTATACCAAGATGAAATTGG+AGG 0.581682 8.1:+72049815 MS.gene066423:CDS
GTGTTAATGAGCTTAGGAGA+AGG 0.583267 8.1:+72049647 MS.gene066423:CDS
ATTTAGATAATAAATGAAGC+TGG 0.585134 8.1:-72048640 None:intergenic
TTGGTGATATGATGCAAGCT+TGG 0.588202 8.1:+72049909 MS.gene066423:CDS
TTGTTGGAGATGGAAATAAG+AGG 0.590013 8.1:+72050053 MS.gene066423:CDS
AATGGAGAAGCAATGAAATG+AGG 0.591887 8.1:-72048731 None:intergenic
ATTGATATAAGTCCTTCTGA+AGG 0.616593 8.1:+72049869 MS.gene066423:CDS
TTGATATAAGTCCTTCTGAA+GGG 0.631337 8.1:+72049870 MS.gene066423:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTATTTGTGTTTATATAT+TGG + chr8.1:72048946-72048965 MS.gene066423:intron 15.0%
!! AGATATCATGATTAATTATA+TGG - chr8.1:72048604-72048623 None:intergenic 15.0%
!! AAAAACAGAATTCAAAATTC+AGG + chr8.1:72048825-72048844 MS.gene066423:CDS 20.0%
!! AATAAAAGGACTAATGTAAA+AGG - chr8.1:72048873-72048892 None:intergenic 20.0%
!! ATTTAGATAATAAATGAAGC+TGG - chr8.1:72048643-72048662 None:intergenic 20.0%
!! CATAAGCTAAAAATAGTTTA+TGG - chr8.1:72049105-72049124 None:intergenic 20.0%
!!! GAAAAACAGTTTTGAATAAA+AGG - chr8.1:72048887-72048906 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG - chr8.1:72048707-72048726 None:intergenic 20.0%
! AAATAATCTGAACACACAAA+AGG - chr8.1:72050088-72050107 None:intergenic 25.0%
! ATAATAGGAAGATCAACATA+AGG - chr8.1:72048509-72048528 None:intergenic 25.0%
! ATCAACATAAGGATATGAAT+TGG - chr8.1:72048498-72048517 None:intergenic 25.0%
! ATCTTATACCAAGATGAAAT+TGG + chr8.1:72049812-72049831 MS.gene066423:CDS 25.0%
! TCAGAATTCAAAAAATGTCA+AGG + chr8.1:72049692-72049711 MS.gene066423:CDS 25.0%
! TCTGATACTAAACTTAAACT+TGG + chr8.1:72048680-72048699 MS.gene066423:CDS 25.0%
! TTAGAGAGAATAATCAAAGA+GGG + chr8.1:72050113-72050132 MS.gene066423:CDS 25.0%
! TTTAGAGAGAATAATCAAAG+AGG + chr8.1:72050112-72050131 MS.gene066423:CDS 25.0%
!! AGTTTAAGTTTAGTATCAGA+AGG - chr8.1:72048680-72048699 None:intergenic 25.0%
!!! GTTAAAGAAGATGGTTTTAA+TGG - chr8.1:72048545-72048564 None:intergenic 25.0%
AAAAAGAACTAGAGTGTGTT+TGG - chr8.1:72049508-72049527 None:intergenic 30.0%
AGAGAACTATTGTAGTAAGA+TGG + chr8.1:72049595-72049614 MS.gene066423:CDS 30.0%
ATTGATATAAGTCCTTCTGA+AGG + chr8.1:72049869-72049888 MS.gene066423:CDS 30.0%
CTTGGAGTAATGATAAGTTA+AGG + chr8.1:72049927-72049946 MS.gene066423:CDS 30.0%
GAAAGAGTTGTTAAAGAAGA+TGG - chr8.1:72048554-72048573 None:intergenic 30.0%
GGTTCAGAAATGTCTATAAT+AGG - chr8.1:72048524-72048543 None:intergenic 30.0%
TCTTCCAAATCAAAAAGTTC+TGG - chr8.1:72049746-72049765 None:intergenic 30.0%
TGAAAACACATGAAGGAAAA+TGG + chr8.1:72049846-72049865 MS.gene066423:CDS 30.0%
TTAGCAGATACATAGAAGTT+AGG - chr8.1:72048782-72048801 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG + chr8.1:72049815-72049834 MS.gene066423:CDS 30.0%
TTGATATAAGTCCTTCTGAA+GGG + chr8.1:72049870-72049889 MS.gene066423:CDS 30.0%
! ATCTGTGGATAGATTTTCTT+TGG + chr8.1:72049979-72049998 MS.gene066423:CDS 30.0%
! GTGATGTTAAGTTGTGAAAA+TGG + chr8.1:72050253-72050272 MS.gene066423:intron 30.0%
! TATACAGTTAGAGATTTTGC+TGG + chr8.1:72050154-72050173 MS.gene066423:intron 30.0%
! TGAGAATGAGAAAGTGATTT+TGG + chr8.1:72050018-72050037 MS.gene066423:CDS 30.0%
!! ATCACCAGAACTTTTTGATT+TGG + chr8.1:72049739-72049758 MS.gene066423:CDS 30.0%
!! TTCTAAAGCATGCAAAGATT+GGG + chr8.1:72048571-72048590 MS.gene066423:CDS 30.0%
!! TTTCTAAAGCATGCAAAGAT+TGG + chr8.1:72048570-72048589 MS.gene066423:CDS 30.0%
!!! AGTTGTTTTGAAAGAATCTG+TGG + chr8.1:72049964-72049983 MS.gene066423:CDS 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG + chr8.1:72049990-72050009 MS.gene066423:CDS 30.0%
AAAGCAGTCTATGAAGCTTA+TGG - chr8.1:72049129-72049148 None:intergenic 35.0%
AAGCTTGTGTTAATGAGCTT+AGG + chr8.1:72049641-72049660 MS.gene066423:CDS 35.0%
AATGGAGAAGCAATGAAATG+AGG - chr8.1:72048734-72048753 None:intergenic 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG + chr8.1:72048919-72048938 MS.gene066423:intron 35.0%
CTTCAAGTGAAAACACATGA+AGG + chr8.1:72049839-72049858 MS.gene066423:CDS 35.0%
GGGTCATTAGTGGTAAATAT+TGG + chr8.1:72049890-72049909 MS.gene066423:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG + chr8.1:72050053-72050072 MS.gene066423:CDS 35.0%
TTTGAGAGTCTTAGAGTTGA+TGG + chr8.1:72048755-72048774 MS.gene066423:CDS 35.0%
! TCTAAAGCATGCAAAGATTG+GGG + chr8.1:72048572-72048591 MS.gene066423:CDS 35.0%
!! ACTCTAAGACTCTCAAAGAA+TGG - chr8.1:72048752-72048771 None:intergenic 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG + chr8.1:72049755-72049774 MS.gene066423:CDS 35.0%
CCAAATGAAGTTGTTGGAGA+TGG + chr8.1:72050043-72050062 MS.gene066423:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG - chr8.1:72050046-72050065 None:intergenic 40.0%
CTTATGAACATGTTCCAAGC+TGG - chr8.1:72049339-72049358 None:intergenic 40.0%
GAAGTCCTCCAATTTCATCT+TGG - chr8.1:72049823-72049842 None:intergenic 40.0%
GAGAGAATAATCAAAGAGGG+AGG + chr8.1:72050116-72050135 MS.gene066423:CDS 40.0%
GTGTTAATGAGCTTAGGAGA+AGG + chr8.1:72049647-72049666 MS.gene066423:CDS 40.0%
TACGAACTTGTGAGACTACT+CGG + chr8.1:72048971-72048990 MS.gene066423:intron 40.0%
TCAAAGAGGGAGGTTTGAAA+AGG + chr8.1:72050126-72050145 MS.gene066423:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG + chr8.1:72050037-72050056 MS.gene066423:CDS 40.0%
! TTGGTGATATGATGCAAGCT+TGG + chr8.1:72049909-72049928 MS.gene066423:CDS 40.0%
!! GAAGATCAAGTTGAAGGACT+TGG + chr8.1:72049761-72049780 MS.gene066423:CDS 40.0%
ACCACTAATGACCCTTCAGA+AGG - chr8.1:72049884-72049903 None:intergenic 45.0%
ACGAACTTGTGAGACTACTC+GGG + chr8.1:72048972-72048991 MS.gene066423:intron 45.0%
AGACTGCTTCAGAGAGCTTA+TGG + chr8.1:72049061-72049080 MS.gene066423:intron 45.0%
AGAGGGAGGTTTGAAAAGGT+TGG + chr8.1:72050130-72050149 MS.gene066423:intron 45.0%
ATGAACATGTTCCAAGCTGG+CGG - chr8.1:72049336-72049355 None:intergenic 45.0%
TTATTCAAACACCGCCAGCT+TGG + chr8.1:72049322-72049341 MS.gene066423:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG + chr8.1:72049880-72049899 MS.gene066423:CDS 45.0%
!! ACTCGGGTTGAGAGAGTTTA+TGG + chr8.1:72048988-72049007 MS.gene066423:intron 45.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 72048491 72050309 72048491 ID=MS.gene066423
chr8.1 mRNA 72048491 72050309 72048491 ID=MS.gene066423.t1;Parent=MS.gene066423
chr8.1 exon 72048491 72048846 72048491 ID=MS.gene066423.t1.exon1;Parent=MS.gene066423.t1
chr8.1 CDS 72048491 72048846 72048491 ID=cds.MS.gene066423.t1;Parent=MS.gene066423.t1
chr8.1 exon 72049586 72050147 72049586 ID=MS.gene066423.t1.exon2;Parent=MS.gene066423.t1
chr8.1 CDS 72049586 72050147 72049586 ID=cds.MS.gene066423.t1;Parent=MS.gene066423.t1
chr8.1 exon 72050298 72050309 72050298 ID=MS.gene066423.t1.exon3;Parent=MS.gene066423.t1
chr8.1 CDS 72050298 72050309 72050298 ID=cds.MS.gene066423.t1;Parent=MS.gene066423.t1
Gene Sequence

>MS.gene066423

ATGTCCAATTCATATCCTTATGTTGATCTTCCTATTATAGACATTTCTGAACCATTAAAACCATCTTCTTTAACAACTCTTTCTAAAGCATGCAAAGATTGGGGATTTTTCCATATAATTAATCATGATATCTCTAAAGATCTTTGTAGCCAGCTTCATTTATTATCTAAATACATATTTAATCTTCCTTCTGATACTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTACACACCTCATTTCATTGCTTCTCCATTCTTTGAGAGTCTTAGAGTTGATGGACCTAACTTCTATGTATCTGCTAAGAGTTCTGAAGATGTTTTGTTTGAAAAACAGAATTCAAAATTCAGGTATTGTTTAAGAATTTTGTTATCCTTTTACATTAGTCCTTTTATTCAAAACTGTTTTTCTATTTCATATGTCTTAGAGCTTAGAGTTTGTATGGAATGACTTATTTGTGTTTATATATTGGCATACGAACTTGTGAGACTACTCGGGTTGAGAGAGTTTATGGTCTGTTTGAATTGACTTATTTGAATTTATTTGCTGACATAAGTACTCTCGAGACTGCTTCAGAGAGCTTATGGAAACAACTTATAATACATCCATAAACTATTTTTAGCTTATGTCCATAAGCTTCATAGACTGCTTTTAGCTTATTTTCGTAAGCTCTTCAAGATAGCTTATGAAAAAAGTTTATATGAAAAAAGTTTGACTTTACTTTATCTTTTGTAATGAAAATAACTTATACAAAAGCACTTATATGATAAGCACTTATAAGATGTTTACAAGCACTAAAATGATGATCACTTATAATTAAGTTGTTTATTCAAACACCGCCAGCTTGGAACATGTTCATAAGCTGTTTTCAGCTTATTTTCATAAGCTCTTCAAGATAGCGTATAAAAATAGCTCATATAAAAAAAGTTTGACTTTACTTTATCTTTCATTGTGAAAATAACTTATGAAAAAGCACTTATTCTATTAGTGCTTAATTAAGTTGTTTATCCAAACACACTCTAGTTCTTTTTAAGCTTTTGTTTAATAAAAAATGCATAATTTCTTTCTCTTTTTATATATTTTCAACAGTGAGACACTAGAGAACTATTGTAGTAAGATGGCAGATTTATCAGAAAGAATTTTAAAGCTTGTGTTAATGAGCTTAGGAGAAGGATTTGAGAAACTATTTTATGATTCAGAATTCAAAAAATGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAACTTTTTGATTTGGAAGATCAAGTTGAAGGACTTGGAATGCACACTGACATGAGCTGCATTACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTGAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCATTAGTGGTAAATATTGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTAAGGTCTTCTGAACATAGAGTTGTTTTGAAAGAATCTGTGGATAGATTTTCTTTGGCTTTCTTTTGGTGTTTTGAGAATGAGAAAGTGATTTTGGCACCAAATGAAGTTGTTGGAGATGGAAATAAGAGGATGTATGATCCTTTTGTGTGTTCAGATTATTTGAAGTTTAGAGAGAATAATCAAAGAGGGAGGTTTGAAAAGGTTGGTTATACAGTTAGAGATTTTGCTGGAATTAAGTCTCAAATAATTATGTAAATTCATCATATCATATTTAATAATTTGTGCTTTCTTTGATTTACATTTATAGTGATGTTAAGTTGTGAAAATGGTATATATAAACTTAATATACAGAAAGACTGTTGA

Protein sequence

>MS.gene066423.t1

MSNSYPYVDLPIIDISEPLKPSSLTTLSKACKDWGFFHIINHDISKDLCSQLHLLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSETLENYCSKMADLSERILKLVLMSLGEGFEKLFYDSEFKKCQGYLRINNYTSPELFDLEDQVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKESVDRFSLAFFWCFENEKVILAPNEVVGDGNKRMYDPFVCSDYLKFRENNQRGRFEKKDC