Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066437.t1 | KEH44519.1 | 98.7 | 226 | 3 | 0 | 14 | 239 | 395 | 620 | 1.00E-116 | 429.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066437.t1 | A0A072W2Q0 | 98.7 | 226 | 3 | 0 | 14 | 239 | 285 | 510 | 7.4e-117 | 429.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050156 | MS.gene066437 | 0.819807 | 9.57E-53 | -1.69E-46 |
MS.gene050799 | MS.gene066437 | 0.80105 | 1.08E-48 | -1.69E-46 |
MS.gene051744 | MS.gene066437 | 0.800659 | 1.30E-48 | -1.69E-46 |
MS.gene052519 | MS.gene066437 | 0.802534 | 5.36E-49 | -1.69E-46 |
MS.gene055818 | MS.gene066437 | 0.801947 | 7.08E-49 | -1.69E-46 |
MS.gene057026 | MS.gene066437 | 0.802166 | 6.38E-49 | -1.69E-46 |
MS.gene060352 | MS.gene066437 | 0.806671 | 7.35E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066437.t1 | MTR_1g115610 | 98.673 | 226 | 3 | 0 | 14 | 239 | 285 | 510 | 3.51e-163 | 461 |
MS.gene066437.t1 | MTR_1g115610 | 98.673 | 226 | 3 | 0 | 14 | 239 | 457 | 682 | 8.21e-161 | 461 |
MS.gene066437.t1 | MTR_1g115610 | 98.673 | 226 | 3 | 0 | 14 | 239 | 395 | 620 | 1.13e-160 | 459 |
MS.gene066437.t1 | MTR_1g067400 | 38.532 | 218 | 113 | 5 | 16 | 232 | 454 | 651 | 5.17e-36 | 134 |
MS.gene066437.t1 | MTR_1g115610 | 100.000 | 46 | 0 | 0 | 14 | 59 | 457 | 502 | 1.93e-25 | 103 |
MS.gene066437.t1 | MTR_1g115610 | 100.000 | 46 | 0 | 0 | 14 | 59 | 529 | 574 | 5.42e-25 | 103 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066437.t1 | AT5G13560 | 49.784 | 231 | 100 | 5 | 15 | 233 | 452 | 678 | 3.60e-53 | 182 |
MS.gene066437.t1 | AT2G37370 | 38.865 | 229 | 119 | 6 | 14 | 235 | 451 | 665 | 9.94e-35 | 131 |
MS.gene066437.t1 | AT2G37370 | 38.865 | 229 | 119 | 6 | 14 | 235 | 451 | 665 | 9.94e-35 | 131 |
MS.gene066437.t1 | AT2G37370 | 38.865 | 229 | 119 | 6 | 14 | 235 | 451 | 665 | 9.94e-35 | 131 |
Find 44 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTTGAGTGAAGGTGATTT+TGG | 0.288162 | 1.2:+85754081 | None:intergenic |
GCCAAGCTTGAATCTGAGTT+TGG | 0.308709 | 1.2:-85754027 | MS.gene066437:CDS |
CTCAACAGGGAAATATTTCC+AGG | 0.314692 | 1.2:-85754591 | MS.gene066437:intron |
TCACAACAAATGTTCCAATA+TGG | 0.319869 | 1.2:+85755325 | None:intergenic |
TCTCATTACCTTGGCTTCAT+AGG | 0.340227 | 1.2:+85754969 | None:intergenic |
GAGCCTTGTATTAACCATAT+TGG | 0.343181 | 1.2:-85755339 | MS.gene066437:CDS |
GCTTGGCTAATTCAGCTTCA+TGG | 0.372198 | 1.2:+85754043 | None:intergenic |
CAACAGAGGAAATTAATGAT+TGG | 0.407683 | 1.2:-85753981 | MS.gene066437:CDS |
TCACCTTCTGCTTCAGTTGG+AGG | 0.409354 | 1.2:-85754138 | MS.gene066437:CDS |
CCTTCACCTTCTGCTTCAGT+TGG | 0.429537 | 1.2:-85754141 | MS.gene066437:CDS |
AACAGAGGAAATTAATGATT+GGG | 0.436246 | 1.2:-85753980 | MS.gene066437:CDS |
GGGCTCTCTATTTCAAGAAC+TGG | 0.470284 | 1.2:+85754213 | None:intergenic |
TATTACCACTTTCAGTGTAG+TGG | 0.493198 | 1.2:-85754638 | MS.gene066437:CDS |
TCCAAACTCAGATTCAAGCT+TGG | 0.493581 | 1.2:+85754026 | None:intergenic |
ACTCAAATCAGATCAGGTAT+TGG | 0.495936 | 1.2:-85754067 | MS.gene066437:CDS |
ACCTTCACTCAAATCAGATC+AGG | 0.497789 | 1.2:-85754073 | MS.gene066437:CDS |
CACATATTCTCAGTCTCTAC+AGG | 0.506004 | 1.2:-85755653 | MS.gene066437:intron |
TCTTCCTCAAGATTTCTCCT+TGG | 0.509071 | 1.2:+85755000 | None:intergenic |
ACCTCTGAGTCAAATTCTTG+AGG | 0.526194 | 1.2:+85755301 | None:intergenic |
TCAGCTTCTTACTACTTACC+AGG | 0.534463 | 1.2:-85755488 | MS.gene066437:intron |
CTGAGAATATGTGGTGGTGG+TGG | 0.536848 | 1.2:+85755663 | None:intergenic |
GTTATCCACTACACTGAAAG+TGG | 0.538687 | 1.2:+85754633 | None:intergenic |
ATGTTTCAGTCTTCACAGGT+GGG | 0.545766 | 1.2:+85754193 | None:intergenic |
TGAATCCTCAGTATCTGCAC+TGG | 0.552752 | 1.2:+85755035 | None:intergenic |
GGTAATGTTTCAGTCTTCAC+AGG | 0.553096 | 1.2:+85754189 | None:intergenic |
GTAAGTAGTAAGAAGCTGAA+TGG | 0.557069 | 1.2:+85755492 | None:intergenic |
GCTTGAATCTGAGTTTGGAA+AGG | 0.561070 | 1.2:-85754022 | MS.gene066437:CDS |
ATTCACAAGTATTAAGTCCA+AGG | 0.573750 | 1.2:-85755017 | MS.gene066437:CDS |
AATGTTTCAGTCTTCACAGG+TGG | 0.579834 | 1.2:+85754192 | None:intergenic |
AGACTGAGAATATGTGGTGG+TGG | 0.588642 | 1.2:+85755660 | None:intergenic |
TGTCTCTGTCTTTGAAAACT+CGG | 0.592272 | 1.2:+85754113 | None:intergenic |
AAGTCCAAGGAGAAATCTTG+AGG | 0.609204 | 1.2:-85755004 | MS.gene066437:CDS |
CTGTAGAGACTGAGAATATG+TGG | 0.609992 | 1.2:+85755654 | None:intergenic |
GTTCCAATATGGTTAATACA+AGG | 0.611572 | 1.2:+85755336 | None:intergenic |
ACCTGATCTGATTTGAGTGA+AGG | 0.615572 | 1.2:+85754072 | None:intergenic |
ATATTTGACCTATGAAGCCA+AGG | 0.617510 | 1.2:-85754977 | MS.gene066437:intron |
GTACCTCCAACTGAAGCAGA+AGG | 0.621842 | 1.2:+85754135 | None:intergenic |
ACCTCAAGAATTTGACTCAG+AGG | 0.624174 | 1.2:-85755302 | MS.gene066437:intron |
CCAACTGAAGCAGAAGGTGA+AGG | 0.636940 | 1.2:+85754141 | None:intergenic |
GACAACCAGTGCAGATACTG+AGG | 0.645584 | 1.2:-85755040 | MS.gene066437:CDS |
TGTTTGTCTACAGAAAGAGT+TGG | 0.668783 | 1.2:-85755361 | MS.gene066437:intron |
TACTCAAGATTACTCAACAG+AGG | 0.683783 | 1.2:-85753995 | MS.gene066437:CDS |
TGATGAATTGGAGAGACACG+AGG | 0.721987 | 1.2:-85755533 | MS.gene066437:CDS |
TAGAGACTGAGAATATGTGG+TGG | 0.797206 | 1.2:+85755657 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTATATTCGATATTTC+CGG | + | chr1.2:85753988-85754007 | None:intergenic | 15.0% |
!! | TGTAAAAAAATAAAGAACAA+TGG | + | chr1.2:85754015-85754034 | None:intergenic | 15.0% |
!!! | GTATTTTTGTACTAATATTT+TGG | - | chr1.2:85754840-85754859 | MS.gene066437:intron | 15.0% |
!! | AAAAAAAAAAGAACAAATCC+AGG | + | chr1.2:85754745-85754764 | None:intergenic | 20.0% |
!! | ACATAGGAAGAAAAAAAAAA+CGG | + | chr1.2:85754208-85754227 | None:intergenic | 20.0% |
!! | TATTAAATCTTGTCTTACAT+GGG | - | chr1.2:85754337-85754356 | MS.gene066437:intron | 20.0% |
!! | TTATTAAATCTTGTCTTACA+TGG | - | chr1.2:85754336-85754355 | MS.gene066437:intron | 20.0% |
!!! | TATTTCCTTAATTTTTCTTG+AGG | - | chr1.2:85754527-85754546 | MS.gene066437:intron | 20.0% |
! | AACAGAGGAAATTAATGATT+GGG | - | chr1.2:85755625-85755644 | MS.gene066437:intron | 25.0% |
! | AAGAAAGAAAATACAAAACC+TGG | + | chr1.2:85755035-85755054 | None:intergenic | 25.0% |
! | CTTGAAAAAGAATTTGTATC+TGG | - | chr1.2:85755659-85755678 | MS.gene066437:CDS | 25.0% |
! | TTCTTTCTTACTAACTATGT+CGG | - | chr1.2:85755046-85755065 | MS.gene066437:CDS | 25.0% |
!! | AAAGTGCAATTTTTCCATTA+GGG | + | chr1.2:85754719-85754738 | None:intergenic | 25.0% |
!! | TAATCTGAAACAAGAAAACA+TGG | + | chr1.2:85754949-85754968 | None:intergenic | 25.0% |
!!! | AAAAGTGCAATTTTTCCATT+AGG | + | chr1.2:85754720-85754739 | None:intergenic | 25.0% |
!!! | TGGTTTTAACAGGTATTATT+AGG | + | chr1.2:85755168-85755187 | None:intergenic | 25.0% |
!!! | TTTCCATTTAACTTGCTTAT+CGG | - | chr1.2:85755281-85755300 | MS.gene066437:intron | 25.0% |
!!! | TTTTTTGTGAAGTGATGAAT+TGG | - | chr1.2:85754060-85754079 | MS.gene066437:CDS | 25.0% |
AGGAAGAAAAAAAAAACGGA+GGG | + | chr1.2:85754204-85754223 | None:intergenic | 30.0% | |
AGGGGAGAAATAATTTGAAA+AGG | + | chr1.2:85754700-85754719 | None:intergenic | 30.0% | |
ATGATAAGATGTTCTTAGCA+GGG | + | chr1.2:85755203-85755222 | None:intergenic | 30.0% | |
ATTCACAAGTATTAAGTCCA+AGG | - | chr1.2:85754588-85754607 | MS.gene066437:intron | 30.0% | |
CAACAGAGGAAATTAATGAT+TGG | - | chr1.2:85755624-85755643 | MS.gene066437:intron | 30.0% | |
GTTCCAATATGGTTAATACA+AGG | + | chr1.2:85754272-85754291 | None:intergenic | 30.0% | |
TAGGAAGAAAAAAAAAACGG+AGG | + | chr1.2:85754205-85754224 | None:intergenic | 30.0% | |
TATGATAAGATGTTCTTAGC+AGG | + | chr1.2:85755204-85755223 | None:intergenic | 30.0% | |
TCACAACAAATGTTCCAATA+TGG | + | chr1.2:85754283-85754302 | None:intergenic | 30.0% | |
TCTTTCTTACTAACTATGTC+GGG | - | chr1.2:85755047-85755066 | MS.gene066437:CDS | 30.0% | |
TGCTAAGAACATCTTATCAT+AGG | - | chr1.2:85755203-85755222 | MS.gene066437:intron | 30.0% | |
TGTCTCCTCAAGAAAAATTA+AGG | + | chr1.2:85754535-85754554 | None:intergenic | 30.0% | |
TTGTAGATTAAGAAGAGAGA+CGG | + | chr1.2:85755259-85755278 | None:intergenic | 30.0% | |
! | AAAGTTACGAACTCATTTTG+AGG | - | chr1.2:85755358-85755377 | MS.gene066437:intron | 30.0% |
! | AAGTGCAATTTTTCCATTAG+GGG | + | chr1.2:85754718-85754737 | None:intergenic | 30.0% |
! | ATGAGTTCGTAACTTTTCAA+TGG | + | chr1.2:85755354-85755373 | None:intergenic | 30.0% |
! | GAAAAATTGCACTTTTATCC+TGG | - | chr1.2:85754724-85754743 | MS.gene066437:intron | 30.0% |
! | TCAAATTATTTCTCCCCTAA+TGG | - | chr1.2:85754702-85754721 | MS.gene066437:intron | 30.0% |
! | TTAATTTTTCTTGAGGAGAC+AGG | - | chr1.2:85754534-85754553 | MS.gene066437:intron | 30.0% |
! | TTTGAGTGATTTTGAATTGC+TGG | - | chr1.2:85754660-85754679 | MS.gene066437:intron | 30.0% |
!! | TTCCATTTAACTTGCTTATC+GGG | - | chr1.2:85755282-85755301 | MS.gene066437:intron | 30.0% |
!!! | GAAAACAGAATGGTTTTAAC+AGG | + | chr1.2:85755178-85755197 | None:intergenic | 30.0% |
!!! | TTTTTTTCCCTTCAATTCAG+TGG | - | chr1.2:85754759-85754778 | MS.gene066437:intron | 30.0% |
AAAAGAGTCCACAATATGAC+AGG | + | chr1.2:85754807-85754826 | None:intergenic | 35.0% | |
AACCCGATAAGCAAGTTAAA+TGG | + | chr1.2:85755287-85755306 | None:intergenic | 35.0% | |
AATTGAAGCCACTGAATTGA+AGG | + | chr1.2:85754770-85754789 | None:intergenic | 35.0% | |
ACTCAAATCAGATCAGGTAT+TGG | - | chr1.2:85755538-85755557 | MS.gene066437:intron | 35.0% | |
ATATTTGACCTATGAAGCCA+AGG | - | chr1.2:85754628-85754647 | MS.gene066437:CDS | 35.0% | |
ATTGAAGCCACTGAATTGAA+GGG | + | chr1.2:85754769-85754788 | None:intergenic | 35.0% | |
CAAGAAAACATGGAGAATCA+TGG | + | chr1.2:85754939-85754958 | None:intergenic | 35.0% | |
CCATTATCTGAATCAGTGAA+GGG | + | chr1.2:85754152-85754171 | None:intergenic | 35.0% | |
GTAAGTAGTAAGAAGCTGAA+TGG | + | chr1.2:85754116-85754135 | None:intergenic | 35.0% | |
TACTCAAGATTACTCAACAG+AGG | - | chr1.2:85755610-85755629 | MS.gene066437:intron | 35.0% | |
TATTACCACTTTCAGTGTAG+TGG | - | chr1.2:85754967-85754986 | MS.gene066437:intron | 35.0% | |
TGTTTGTCTACAGAAAGAGT+TGG | - | chr1.2:85754244-85754263 | MS.gene066437:CDS | 35.0% | |
TTAGCTGGCAATTTCTTTGA+TGG | - | chr1.2:85754365-85754384 | MS.gene066437:intron | 35.0% | |
! | AAACTCAAACCTTTTCTCAC+TGG | - | chr1.2:85755130-85755149 | MS.gene066437:intron | 35.0% |
! | GAGCCTTGTATTAACCATAT+TGG | - | chr1.2:85754266-85754285 | MS.gene066437:CDS | 35.0% |
! | GATTTGAGTGAAGGTGATTT+TGG | + | chr1.2:85755527-85755546 | None:intergenic | 35.0% |
! | TGTCTCTGTCTTTGAAAACT+CGG | + | chr1.2:85755495-85755514 | None:intergenic | 35.0% |
!! | CCTTCACTGATTCAGATAAT+GGG | - | chr1.2:85754150-85754169 | MS.gene066437:CDS | 35.0% |
!! | TTCAGATAATGGGTGGAAAA+TGG | - | chr1.2:85754160-85754179 | MS.gene066437:CDS | 35.0% |
AACACTGTCCTGTCATATTG+TGG | - | chr1.2:85754796-85754815 | MS.gene066437:intron | 40.0% | |
AACTCTCTCTTCATCTTTCC+TGG | + | chr1.2:85755315-85755334 | None:intergenic | 40.0% | |
AAGTCCAAGGAGAAATCTTG+AGG | - | chr1.2:85754601-85754620 | MS.gene066437:CDS | 40.0% | |
AATGTTTCAGTCTTCACAGG+TGG | + | chr1.2:85755416-85755435 | None:intergenic | 40.0% | |
ACAGCAAGCAACAGATATTG+AGG | + | chr1.2:85754904-85754923 | None:intergenic | 40.0% | |
ACCTCAAGAATTTGACTCAG+AGG | - | chr1.2:85754303-85754322 | MS.gene066437:intron | 40.0% | |
ACCTCTGAGTCAAATTCTTG+AGG | + | chr1.2:85754307-85754326 | None:intergenic | 40.0% | |
ACCTTCACTCAAATCAGATC+AGG | - | chr1.2:85755532-85755551 | MS.gene066437:CDS | 40.0% | |
AGTGAAGGGAAGTAAATACC+TGG | + | chr1.2:85754138-85754157 | None:intergenic | 40.0% | |
ATGTTTCAGTCTTCACAGGT+GGG | + | chr1.2:85755415-85755434 | None:intergenic | 40.0% | |
CACATATTCTCAGTCTCTAC+AGG | - | chr1.2:85753952-85753971 | MS.gene066437:CDS | 40.0% | |
CACTCAAAGTCTCATTACCT+TGG | + | chr1.2:85754648-85754667 | None:intergenic | 40.0% | |
CAGCAAGCAACAGATATTGA+GGG | + | chr1.2:85754903-85754922 | None:intergenic | 40.0% | |
CCCATTATCTGAATCAGTGA+AGG | + | chr1.2:85754153-85754172 | None:intergenic | 40.0% | |
CTCAACAGGGAAATATTTCC+AGG | - | chr1.2:85755014-85755033 | MS.gene066437:CDS | 40.0% | |
CTCTACAGGTATCTTTCTAC+CGG | - | chr1.2:85753966-85753985 | MS.gene066437:CDS | 40.0% | |
CTGTAGAGACTGAGAATATG+TGG | + | chr1.2:85753954-85753973 | None:intergenic | 40.0% | |
GCGTAGGTCATATTACACAT+AGG | + | chr1.2:85754224-85754243 | None:intergenic | 40.0% | |
GCTTGAATCTGAGTTTGGAA+AGG | - | chr1.2:85755583-85755602 | MS.gene066437:intron | 40.0% | |
GGTAATGTTTCAGTCTTCAC+AGG | + | chr1.2:85755419-85755438 | None:intergenic | 40.0% | |
GTTATCCACTACACTGAAAG+TGG | + | chr1.2:85754975-85754994 | None:intergenic | 40.0% | |
TAGAGACTGAGAATATGTGG+TGG | + | chr1.2:85753951-85753970 | None:intergenic | 40.0% | |
TAGCAGGGAAGAAAACAGAA+TGG | + | chr1.2:85755188-85755207 | None:intergenic | 40.0% | |
TCAGCTTCTTACTACTTACC+AGG | - | chr1.2:85754117-85754136 | MS.gene066437:CDS | 40.0% | |
TCCAAACTCAGATTCAAGCT+TGG | + | chr1.2:85755582-85755601 | None:intergenic | 40.0% | |
TCTCATTACCTTGGCTTCAT+AGG | + | chr1.2:85754639-85754658 | None:intergenic | 40.0% | |
TCTTCCTCAAGATTTCTCCT+TGG | + | chr1.2:85754608-85754627 | None:intergenic | 40.0% | |
TTTCTGTAGACAAACAGCGT+AGG | + | chr1.2:85754240-85754259 | None:intergenic | 40.0% | |
! | ACCTGATCTGATTTGAGTGA+AGG | + | chr1.2:85755536-85755555 | None:intergenic | 40.0% |
! | CCTTCTGAGAAAAAGTCAGA+TGG | - | chr1.2:85755437-85755456 | MS.gene066437:intron | 40.0% |
! | CGAGGACTATTTTGTGAACT+TGG | - | chr1.2:85754090-85754109 | MS.gene066437:CDS | 40.0% |
! | GAGTTTTCAAAGACAGAGAC+AGG | - | chr1.2:85755494-85755513 | MS.gene066437:CDS | 40.0% |
!! | ACAGCAGTTTTATGCTCAAC+AGG | - | chr1.2:85755000-85755019 | MS.gene066437:CDS | 40.0% |
!! | CAGCAGTTTTATGCTCAACA+GGG | - | chr1.2:85755001-85755020 | MS.gene066437:CDS | 40.0% |
!! | CCATCTGACTTTTTCTCAGA+AGG | + | chr1.2:85755440-85755459 | None:intergenic | 40.0% |
!! | CCCTTCACTGATTCAGATAA+TGG | - | chr1.2:85754149-85754168 | MS.gene066437:CDS | 40.0% |
!! | TCACTGATTCAGATAATGGG+TGG | - | chr1.2:85754153-85754172 | MS.gene066437:CDS | 40.0% |
!!! | CTCATTTTGAGGCTATAGAG+AGG | - | chr1.2:85755369-85755388 | MS.gene066437:intron | 40.0% |
AGACTGAGAATATGTGGTGG+TGG | + | chr1.2:85753948-85753967 | None:intergenic | 45.0% | |
CAGATATTGAGGGTCAGACA+TGG | + | chr1.2:85754893-85754912 | None:intergenic | 45.0% | |
GCCAAGCTTGAATCTGAGTT+TGG | - | chr1.2:85755578-85755597 | MS.gene066437:intron | 45.0% | |
GCTTGGCTAATTCAGCTTCA+TGG | + | chr1.2:85755565-85755584 | None:intergenic | 45.0% | |
GGGCTCTCTATTTCAAGAAC+TGG | + | chr1.2:85755395-85755414 | None:intergenic | 45.0% | |
TGAATCCTCAGTATCTGCAC+TGG | + | chr1.2:85754573-85754592 | None:intergenic | 45.0% | |
TGATGAATTGGAGAGACACG+AGG | - | chr1.2:85754072-85754091 | MS.gene066437:CDS | 45.0% | |
TGCTTATCGGGTTCAAATCC+AGG | - | chr1.2:85755294-85755313 | MS.gene066437:intron | 45.0% | |
TGTGTGTGTGTGTGTGTGTT+TGG | - | chr1.2:85754452-85754471 | MS.gene066437:intron | 45.0% | |
! | CTTACATGGGCACTTTTAGC+TGG | - | chr1.2:85754350-85754369 | MS.gene066437:intron | 45.0% |
! | GTGGACTCTTTTGTAGCTGT+TGG | - | chr1.2:85754815-85754834 | MS.gene066437:intron | 45.0% |
!! | GATAATGGGTGGAAAATGGC+AGG | - | chr1.2:85754164-85754183 | MS.gene066437:CDS | 45.0% |
CCAACTGAAGCAGAAGGTGA+AGG | + | chr1.2:85755467-85755486 | None:intergenic | 50.0% | |
CCTTCACCTTCTGCTTCAGT+TGG | - | chr1.2:85755464-85755483 | MS.gene066437:intron | 50.0% | |
GACAACCAGTGCAGATACTG+AGG | - | chr1.2:85754565-85754584 | MS.gene066437:intron | 50.0% | |
GACTCACGACCAGTGAGAAA+AGG | + | chr1.2:85755142-85755161 | None:intergenic | 50.0% | |
GTACCTCCAACTGAAGCAGA+AGG | + | chr1.2:85755473-85755492 | None:intergenic | 50.0% | |
TCACCTTCTGCTTCAGTTGG+AGG | - | chr1.2:85755467-85755486 | MS.gene066437:intron | 50.0% | |
!! | CTGAGAATATGTGGTGGTGG+TGG | + | chr1.2:85753945-85753964 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 85753933 | 85755694 | 85753933 | ID=MS.gene066437 |
chr1.2 | mRNA | 85753933 | 85755694 | 85753933 | ID=MS.gene066437.t1;Parent=MS.gene066437 |
chr1.2 | exon | 85755654 | 85755694 | 85755654 | ID=MS.gene066437.t1.exon1;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85755654 | 85755694 | 85755654 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
chr1.2 | exon | 85755489 | 85755555 | 85755489 | ID=MS.gene066437.t1.exon2;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85755489 | 85755555 | 85755489 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
chr1.2 | exon | 85755303 | 85755370 | 85755303 | ID=MS.gene066437.t1.exon3;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85755303 | 85755370 | 85755303 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
chr1.2 | exon | 85754978 | 85755071 | 85754978 | ID=MS.gene066437.t1.exon4;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85754978 | 85755071 | 85754978 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
chr1.2 | exon | 85754592 | 85754662 | 85754592 | ID=MS.gene066437.t1.exon5;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85754592 | 85754662 | 85754592 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
chr1.2 | exon | 85753933 | 85754311 | 85753933 | ID=MS.gene066437.t1.exon6;Parent=MS.gene066437.t1 |
chr1.2 | CDS | 85753933 | 85754311 | 85753933 | ID=cds.MS.gene066437.t1;Parent=MS.gene066437.t1 |
Gene Sequence |
Protein sequence |