Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066472.t1 | XP_003629056.1 | 95.2 | 583 | 25 | 1 | 1 | 580 | 1 | 583 | 1.90E-289 | 1004.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066472.t1 | A0A0A1C930 | 70.0 | 600 | 154 | 8 | 1 | 580 | 1 | 594 | 3.4e-215 | 749.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066472.t1 | A9YVC5 | 95.2 | 583 | 25 | 1 | 1 | 580 | 1 | 583 | 1.4e-289 | 1004.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene066472 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene066472 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene066472 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene055729 | MS.gene066472 | 0.804424 | 2.18E-49 | -1.69E-46 |
| MS.gene055730 | MS.gene066472 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene055731 | MS.gene066472 | 0.824761 | 6.77E-54 | -1.69E-46 |
| MS.gene056633 | MS.gene066472 | -0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene056694 | MS.gene066472 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene056697 | MS.gene066472 | 0.847785 | 9.28E-60 | -1.69E-46 |
| MS.gene058184 | MS.gene066472 | 0.840069 | 1.09E-57 | -1.69E-46 |
| MS.gene058235 | MS.gene066472 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene05926 | MS.gene066472 | 0.842666 | 2.25E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066472.t1 | MTR_8g072640 | 98.113 | 583 | 8 | 1 | 1 | 580 | 1 | 583 | 0.0 | 1165 |
| MS.gene066472.t1 | MTR_5g024880 | 77.184 | 561 | 110 | 5 | 28 | 580 | 17 | 567 | 0.0 | 875 |
| MS.gene066472.t1 | MTR_5g091050 | 75.000 | 580 | 110 | 6 | 1 | 580 | 1 | 545 | 0.0 | 862 |
| MS.gene066472.t1 | MTR_5g026500 | 78.558 | 541 | 94 | 4 | 42 | 580 | 30 | 550 | 0.0 | 857 |
| MS.gene066472.t1 | MTR_5g026450 | 77.757 | 544 | 99 | 4 | 37 | 580 | 21 | 542 | 0.0 | 853 |
| MS.gene066472.t1 | MTR_5g026460 | 77.757 | 544 | 99 | 4 | 37 | 580 | 21 | 542 | 0.0 | 853 |
| MS.gene066472.t1 | MTR_5g026430 | 77.757 | 544 | 99 | 4 | 37 | 580 | 21 | 542 | 0.0 | 853 |
| MS.gene066472.t1 | MTR_5g026480 | 77.757 | 544 | 99 | 4 | 37 | 580 | 21 | 542 | 0.0 | 853 |
| MS.gene066472.t1 | MTR_5g087550 | 70.256 | 585 | 149 | 5 | 1 | 580 | 1 | 565 | 0.0 | 792 |
| MS.gene066472.t1 | MTR_5g024880 | 75.311 | 482 | 101 | 5 | 28 | 501 | 17 | 488 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066472.t1 | AT1G76490 | 70.084 | 595 | 146 | 7 | 1 | 576 | 51 | 632 | 0.0 | 820 |
| MS.gene066472.t1 | AT2G17370 | 71.508 | 537 | 131 | 6 | 42 | 575 | 37 | 554 | 0.0 | 759 |
Find 163 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTCCGCCGTTTACCTTCT+AGG | 0.154239 | 8.2:+31447322 | MS.gene066472:CDS |
| TGTAAAGCTATTCATGTTTC+TGG | 0.186633 | 8.2:+31447862 | MS.gene066472:CDS |
| TGGTGGTGGTGGTAAGCTTC+TGG | 0.194075 | 8.2:-31447123 | None:intergenic |
| CAGCCCTTGCTGGTGCTCTT+GGG | 0.194967 | 8.2:+31449380 | MS.gene066472:CDS |
| TTTCGATTACGATTCGATAT+TGG | 0.207910 | 8.2:+31447702 | MS.gene066472:CDS |
| TCAGCCCTTGCTGGTGCTCT+TGG | 0.215407 | 8.2:+31449379 | MS.gene066472:CDS |
| GCAAGCTCACGAGACGATTT+TGG | 0.234160 | 8.2:-31450082 | None:intergenic |
| CAAATTCCGGTTGGTGTTGC+GGG | 0.266196 | 8.2:+31447757 | MS.gene066472:CDS |
| TTCGATTACGATTCGATATT+GGG | 0.270716 | 8.2:+31447703 | MS.gene066472:CDS |
| TCAGCGGTGCAAACGATAAC+TGG | 0.306795 | 8.2:+31447649 | MS.gene066472:CDS |
| TTTGCAATTTCCTCGTCTTC+CGG | 0.344235 | 8.2:-31447544 | None:intergenic |
| TCTTAATTTACTTGGTGTTA+AGG | 0.349199 | 8.2:+31449903 | MS.gene066472:CDS |
| AGCATTCAGCCTACAATTGC+TGG | 0.351295 | 8.2:+31448931 | MS.gene066472:CDS |
| GATAGGGTTTGTTCAAATTC+CGG | 0.351442 | 8.2:+31447744 | MS.gene066472:CDS |
| GTCTGCTAGTCTAGATTCTA+AGG | 0.353093 | 8.2:-31447599 | None:intergenic |
| TGACTAGAGCACCTGTTGTT+AGG | 0.353746 | 8.2:+31447917 | MS.gene066472:CDS |
| AATAGCTTTACACCCTCTAT+TGG | 0.356892 | 8.2:-31447851 | None:intergenic |
| CTTAATTTACTTGGTGTTAA+GGG | 0.362558 | 8.2:+31449904 | MS.gene066472:CDS |
| GGTGGTGGTGGTAAGCTTCT+GGG | 0.366246 | 8.2:-31447122 | None:intergenic |
| GACGTATTGCCGCCGCTTTA+CGG | 0.366700 | 8.2:-31447624 | None:intergenic |
| AAATTCTTGCCAGCAATTGT+AGG | 0.370194 | 8.2:-31448940 | None:intergenic |
| CTTCTAGGTTTCTTCGGTAT+CGG | 0.393361 | 8.2:+31447337 | MS.gene066472:CDS |
| AGAAAGCGGCAGCTGTGAAC+TGG | 0.395257 | 8.2:+31449233 | MS.gene066472:CDS |
| AGCCCTTGCTGGTGCTCTTG+GGG | 0.401203 | 8.2:+31449381 | MS.gene066472:CDS |
| AACATGCTTAAGAACCTAAC+TGG | 0.404216 | 8.2:+31449355 | MS.gene066472:CDS |
| ATTCGATTCCGTTGCAGTAC+TGG | 0.409002 | 8.2:+31448967 | MS.gene066472:CDS |
| GGAGTTACCGTTGCCGGTGG+TGG | 0.417634 | 8.2:-31447469 | None:intergenic |
| CGGATCACGTACTTCCTTCC+CGG | 0.427778 | 8.2:+31447357 | MS.gene066472:CDS |
| CTAACTGGATCAGCCCTTGC+TGG | 0.430519 | 8.2:+31449370 | MS.gene066472:CDS |
| GCAGCTGTGAACTGGATTGA+AGG | 0.437475 | 8.2:+31449241 | MS.gene066472:CDS |
| GCCCTTGCTGGTGCTCTTGG+GGG | 0.438596 | 8.2:+31449382 | MS.gene066472:CDS |
| AAGGTCCTTGCCATCATTCA+CGG | 0.439029 | 8.2:-31449509 | None:intergenic |
| GGCCACCATTGTAGCTGGTT+CGG | 0.439947 | 8.2:+31449966 | MS.gene066472:CDS |
| ATAACTGGAAAATCTCTAGA+AGG | 0.440221 | 8.2:+31447664 | MS.gene066472:CDS |
| ACGATTGGAGTTACCGTTGC+CGG | 0.443137 | 8.2:-31447475 | None:intergenic |
| ATGGATGTCATTGGAATCTC+AGG | 0.445773 | 8.2:+31449066 | MS.gene066472:CDS |
| CTATTGGCCACCATTGTAGC+TGG | 0.447817 | 8.2:+31449961 | MS.gene066472:CDS |
| TCAGCTTGTCTTAATTTACT+TGG | 0.448427 | 8.2:+31449895 | MS.gene066472:CDS |
| GTTTACCTTCTAGGTTTCTT+CGG | 0.453882 | 8.2:+31447331 | MS.gene066472:CDS |
| CAGCAAGGGCTGATCCAGTT+AGG | 0.457590 | 8.2:-31449369 | None:intergenic |
| CCCTTGCTGGTGCTCTTGGG+GGG | 0.461179 | 8.2:+31449383 | MS.gene066472:CDS |
| GTCACTAACGCTGTATTCTT+CGG | 0.463821 | 8.2:+31447184 | MS.gene066472:CDS |
| GCCGACGAAAACCTAACAAC+AGG | 0.468777 | 8.2:-31447928 | None:intergenic |
| CTCATGTCTGCAATTGCAGC+TGG | 0.470089 | 8.2:+31450009 | MS.gene066472:CDS |
| ATTCCAATGACATCCATGTC+AGG | 0.476477 | 8.2:-31449060 | None:intergenic |
| AGTGGACCCGCAACACCAAC+CGG | 0.478518 | 8.2:-31447763 | None:intergenic |
| TCAAATTCCGGTTGGTGTTG+CGG | 0.481667 | 8.2:+31447756 | MS.gene066472:CDS |
| TCTTCGTCGGAGAGATCGTC+CGG | 0.485409 | 8.2:-31447376 | None:intergenic |
| TCAGGTTGGTACTGTGGGAG+GGG | 0.488097 | 8.2:+31449852 | MS.gene066472:intron |
| CACTAATTTATGTACCTCAA+TGG | 0.488262 | 8.2:-31449554 | None:intergenic |
| ATAATTCAGGTTGGTACTGT+GGG | 0.489921 | 8.2:+31449847 | MS.gene066472:intron |
| TTCCCTGACATGGATGTCAT+TGG | 0.494706 | 8.2:+31449057 | MS.gene066472:CDS |
| TGCACCTGGAGATTCTGTGC+TGG | 0.497072 | 8.2:-31449929 | None:intergenic |
| AGGTGCAAATGCTAGGCTAT+TGG | 0.497308 | 8.2:+31449945 | MS.gene066472:CDS |
| AGTGATGCTGGACACGGTCC+TGG | 0.500783 | 8.2:-31447427 | None:intergenic |
| ATCTTCACCGGAGCTACGAT+TGG | 0.502875 | 8.2:-31447490 | None:intergenic |
| CGATACCGAAGAAACCTAGA+AGG | 0.505448 | 8.2:-31447336 | None:intergenic |
| GAAGAAACCTAGAAGGTAAA+CGG | 0.508337 | 8.2:-31447329 | None:intergenic |
| TTCTCACTGTATTACTATGA+TGG | 0.509558 | 8.2:+31449483 | MS.gene066472:CDS |
| ATCTCTAGAAGGTTTACCGT+TGG | 0.513091 | 8.2:+31447675 | MS.gene066472:CDS |
| TCTTCTCACGCCAACGGTGG+AGG | 0.517024 | 8.2:-31447234 | None:intergenic |
| TGTCACCATGCCTTCCATTG+AGG | 0.519547 | 8.2:+31449540 | MS.gene066472:CDS |
| CTAGAAGGTTTACCGTTGGA+AGG | 0.521102 | 8.2:+31447679 | MS.gene066472:CDS |
| TGTTGCGGGTCCACTGTTGT+TGG | 0.526588 | 8.2:+31447771 | MS.gene066472:CDS |
| TCGCCGCCGGCGGGAGAACG+TGG | 0.527307 | 8.2:-31447088 | None:intergenic |
| CGTAAAACCACCACCGGCAA+CGG | 0.528134 | 8.2:+31447462 | MS.gene066472:CDS |
| GAACTCTCAACATTCTGAGC+AGG | 0.528481 | 8.2:-31449463 | None:intergenic |
| TGCAGTACTGGTGATGCCAT+GGG | 0.530758 | 8.2:+31448979 | MS.gene066472:CDS |
| AATCTCCAGGTGCAAATGCT+AGG | 0.530949 | 8.2:+31449938 | MS.gene066472:CDS |
| ACCTAGAAGGTAAACGGCGG+AGG | 0.531795 | 8.2:-31447323 | None:intergenic |
| GAAGACTAGTGTGGAGGCAC+TGG | 0.533947 | 8.2:+31449324 | MS.gene066472:CDS |
| GGCGCCAGCACAGAATCTCC+AGG | 0.540230 | 8.2:+31449925 | MS.gene066472:CDS |
| GGTGTGTGAGGCTGTAATTA+AGG | 0.541485 | 8.2:+31449279 | MS.gene066472:CDS |
| TCTTCCGGTGTGAGATTCAC+CGG | 0.542834 | 8.2:-31447529 | None:intergenic |
| TGAAATACAACAGATCTAGC+AGG | 0.545624 | 8.2:+31450052 | MS.gene066472:CDS |
| GTTCCCATGGCTACCACTGA+AGG | 0.546410 | 8.2:+31447811 | MS.gene066472:CDS |
| GCGGGTCCACTGTTGTTGGA+TGG | 0.547013 | 8.2:+31447775 | MS.gene066472:CDS |
| TTCAGGTTGGTACTGTGGGA+GGG | 0.548296 | 8.2:+31449851 | MS.gene066472:intron |
| AGGTCCTTGCCATCATTCAC+GGG | 0.549056 | 8.2:-31449508 | None:intergenic |
| TGTCTACATAGCCACCGGTC+AGG | 0.549674 | 8.2:+31449438 | MS.gene066472:CDS |
| TTGCAGTACTGGTGATGCCA+TGG | 0.550722 | 8.2:+31448978 | MS.gene066472:CDS |
| TCAGAGTGACTTCCCTGACA+TGG | 0.551867 | 8.2:+31449047 | MS.gene066472:CDS |
| TCGGTGTCGACAAGTGATGC+TGG | 0.554950 | 8.2:-31447439 | None:intergenic |
| CACCGACGTAAAACCACCAC+CGG | 0.559984 | 8.2:+31447456 | MS.gene066472:CDS |
| AGTGTTGTGAAATGCCGATA+GGG | 0.561600 | 8.2:+31447728 | MS.gene066472:CDS |
| CAGCTGTGAACTGGATTGAA+GGG | 0.562393 | 8.2:+31449242 | MS.gene066472:CDS |
| ATTCAGGTTGGTACTGTGGG+AGG | 0.563884 | 8.2:+31449850 | MS.gene066472:intron |
| GGTAACTCCAATCGTAGCTC+CGG | 0.565145 | 8.2:+31447483 | MS.gene066472:CDS |
| CTTCCTCCACGTTCTCCCGC+CGG | 0.565279 | 8.2:+31447082 | MS.gene066472:CDS |
| AATAATTCAGGTTGGTACTG+TGG | 0.566379 | 8.2:+31449846 | MS.gene066472:intron |
| AAAGCTATTCATGTTTCTGG+TGG | 0.566843 | 8.2:+31447865 | MS.gene066472:CDS |
| ATTGCAAAATCAGTTGTCAT+CGG | 0.567677 | 8.2:+31447559 | MS.gene066472:CDS |
| TGACACCATGTTCATCCCCA+TGG | 0.567983 | 8.2:-31448995 | None:intergenic |
| AAGCTTACCACCACCACCAC+CGG | 0.569453 | 8.2:+31447127 | MS.gene066472:CDS |
| CAGGTTGGTACTGTGGGAGG+GGG | 0.569796 | 8.2:+31449853 | MS.gene066472:intron |
| ATGATGGAACCCGTGAATGA+TGG | 0.569819 | 8.2:+31449499 | MS.gene066472:CDS |
| ACACCCTTCAGTGGTAGCCA+TGG | 0.573230 | 8.2:-31447815 | None:intergenic |
| GAGACTGTGACGACATGAAG+AGG | 0.576532 | 8.2:-31447271 | None:intergenic |
| ACAACTTCATAGATCTTCAC+CGG | 0.578120 | 8.2:-31447502 | None:intergenic |
| ATGTACCTCAATGGAAGGCA+TGG | 0.580763 | 8.2:-31449545 | None:intergenic |
| CAGTGTTGTGAAATGCCGAT+AGG | 0.585519 | 8.2:+31447727 | MS.gene066472:CDS |
| TACGGATCTTCTCACGCCAA+CGG | 0.588503 | 8.2:-31447240 | None:intergenic |
| GAATCTCACACCGGAAGACG+AGG | 0.590710 | 8.2:+31447534 | MS.gene066472:CDS |
| GGCTGTAATTAAGGAAGAGG+TGG | 0.590912 | 8.2:+31449288 | MS.gene066472:CDS |
| AGCAGACTGCCGTAAAGCGG+CGG | 0.591467 | 8.2:+31447615 | MS.gene066472:CDS |
| GTAGCTGGTTCGGTACTCGC+CGG | 0.591964 | 8.2:+31449976 | MS.gene066472:CDS |
| AAAGAAGACTCTCGAAAACC+AGG | 0.593503 | 8.2:+31447409 | MS.gene066472:CDS |
| AATTTATGTACCTCAATGGA+AGG | 0.594939 | 8.2:-31449550 | None:intergenic |
| GAAAGTGTTGAAGACTAGTG+TGG | 0.595958 | 8.2:+31449315 | MS.gene066472:CDS |
| TGAGGCTGTAATTAAGGAAG+AGG | 0.596038 | 8.2:+31449285 | MS.gene066472:CDS |
| CTTGTTGCAAGTACCAATAG+AGG | 0.597773 | 8.2:+31447838 | MS.gene066472:CDS |
| GGGATGAACATGGTGTCAAA+AGG | 0.598387 | 8.2:+31449000 | MS.gene066472:CDS |
| GGCGGCAATACGTCGTTCAG+CGG | 0.601502 | 8.2:+31447633 | MS.gene066472:CDS |
| TTTAGCGAGAATCTCTTCGT+CGG | 0.601897 | 8.2:-31447389 | None:intergenic |
| GGGTTTGTTCAAATTCCGGT+TGG | 0.602041 | 8.2:+31447748 | MS.gene066472:CDS |
| CACCCTTCAGTGGTAGCCAT+GGG | 0.606143 | 8.2:-31447814 | None:intergenic |
| GGAATTTGAACAAACCCTAT+CGG | 0.606204 | 8.2:-31447742 | None:intergenic |
| TTCCCATGGCTACCACTGAA+GGG | 0.607546 | 8.2:+31447812 | MS.gene066472:CDS |
| GAGGAAGAGATTTAAGTCTC+CGG | 0.609171 | 8.2:-31447066 | None:intergenic |
| GCAAGTGTATCAAAATTAAG+CGG | 0.609171 | 8.2:-31447988 | None:intergenic |
| AGTCACTCTGAAGAAAATCA+AGG | 0.609778 | 8.2:-31449035 | None:intergenic |
| ATTCTGAGCAGGATCCTGAC+CGG | 0.609838 | 8.2:-31449452 | None:intergenic |
| TCTGCTGTCTACATAGCCAC+CGG | 0.613011 | 8.2:+31449433 | MS.gene066472:CDS |
| AATAGCCTAGCATTTGCACC+TGG | 0.614511 | 8.2:-31449943 | None:intergenic |
| GTCGGAGAGATCGTCCGGGA+AGG | 0.614794 | 8.2:-31447371 | None:intergenic |
| TGATGCCATGGGGATGAACA+TGG | 0.618362 | 8.2:+31448990 | MS.gene066472:CDS |
| TTCCAATGACATCCATGTCA+GGG | 0.618523 | 8.2:-31449059 | None:intergenic |
| TGGTAAATCTGTGGTGTGTG+AGG | 0.623698 | 8.2:+31449267 | MS.gene066472:CDS |
| GCATGGTGACAGAAATGTGA+AGG | 0.628287 | 8.2:-31449528 | None:intergenic |
| GATCTATGAAGTTGTTGCAC+CGG | 0.629263 | 8.2:+31447510 | MS.gene066472:CDS |
| GAGTACCGAACCAGCTACAA+TGG | 0.630274 | 8.2:-31449971 | None:intergenic |
| TTTCTGTTCTGACAAGAAAG+CGG | 0.630765 | 8.2:+31449219 | MS.gene066472:CDS |
| GAAATACAACAGATCTAGCA+GGG | 0.634441 | 8.2:+31450053 | MS.gene066472:CDS |
| AGTTGAGTACACTGTTCCCA+TGG | 0.639217 | 8.2:+31447798 | MS.gene066472:CDS |
| ATTGGAGTTACCGTTGCCGG+TGG | 0.639384 | 8.2:-31447472 | None:intergenic |
| TGGCATCACCAGTACTGCAA+CGG | 0.640383 | 8.2:-31448975 | None:intergenic |
| TCGACAAGTGATGCTGGACA+CGG | 0.642301 | 8.2:-31447433 | None:intergenic |
| TGCAACAAGACACCCTTCAG+TGG | 0.643810 | 8.2:-31447824 | None:intergenic |
| TATAAGAGAAACGATGGCGG+CGG | 0.644367 | 8.2:-31447299 | None:intergenic |
| GGATCTTCTCACGCCAACGG+TGG | 0.648620 | 8.2:-31447237 | None:intergenic |
| TTGTTGCAAGTACCAATAGA+GGG | 0.651666 | 8.2:+31447839 | MS.gene066472:CDS |
| CTTCGTCGGAGAGATCGTCC+GGG | 0.655523 | 8.2:-31447375 | None:intergenic |
| CCGCCGGCGGGAGAACGTGG+AGG | 0.661160 | 8.2:-31447085 | None:intergenic |
| GGAGGCTATAAGAGAAACGA+TGG | 0.663583 | 8.2:-31447305 | None:intergenic |
| TACCGAACCAGCTACAATGG+TGG | 0.664745 | 8.2:-31449968 | None:intergenic |
| CATGAAGAGGAGTTTCCGTA+CGG | 0.667785 | 8.2:-31447258 | None:intergenic |
| GTGAACTGGATTGAAGGGCG+TGG | 0.669584 | 8.2:+31449247 | MS.gene066472:CDS |
| AGACATGAGTGATAGCTCGC+CGG | 0.669906 | 8.2:-31449995 | None:intergenic |
| GGAACCCGTGAATGATGGCA+AGG | 0.672840 | 8.2:+31449504 | MS.gene066472:CDS |
| GGCTATAAGAGAAACGATGG+CGG | 0.673455 | 8.2:-31447302 | None:intergenic |
| CCTCCACGTTCTCCCGCCGG+CGG | 0.675005 | 8.2:+31447085 | MS.gene066472:CDS |
| CTAGATTCTAAGGAATACGA+CGG | 0.686525 | 8.2:-31447589 | None:intergenic |
| TTGGCGTGAGAAGATCCGTA+CGG | 0.687150 | 8.2:+31447243 | MS.gene066472:CDS |
| CTGAGCAGGATCCTGACCGG+TGG | 0.689157 | 8.2:-31449449 | None:intergenic |
| TCAACTCCATCCAACAACAG+TGG | 0.690537 | 8.2:-31447781 | None:intergenic |
| TGAAGGGCGTGGTAAATCTG+TGG | 0.690759 | 8.2:+31449258 | MS.gene066472:CDS |
| ACTAGCAGACTGCCGTAAAG+CGG | 0.691614 | 8.2:+31447612 | MS.gene066472:CDS |
| AGTGTTGAAGACTAGTGTGG+AGG | 0.700194 | 8.2:+31449318 | MS.gene066472:CDS |
| TCGTAATCGAAACCTTCCAA+CGG | 0.712317 | 8.2:-31447691 | None:intergenic |
| GTGGAGGAGAAAATACGCGA+CGG | 0.712614 | 8.2:-31447218 | None:intergenic |
| GCAGTACTGGTGATGCCATG+GGG | 0.721193 | 8.2:+31448980 | MS.gene066472:CDS |
| TGCACCGGTGAATCTCACAC+CGG | 0.728332 | 8.2:+31447525 | MS.gene066472:CDS |
| GAAACCTAGAAGGTAAACGG+CGG | 0.781690 | 8.2:-31447326 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTTTATTTAATTCCAAA+GGG | - | chr8.2:31449582-31449601 | None:intergenic | 15.0% |
| !! | TCATTCATTAACAATTTAAT+GGG | + | chr8.2:31448874-31448893 | MS.gene066472:intron | 15.0% |
| !! | TTATGTTTATTTAATTCCAA+AGG | - | chr8.2:31449583-31449602 | None:intergenic | 15.0% |
| !! | TTCATTCATTAACAATTTAA+TGG | + | chr8.2:31448873-31448892 | MS.gene066472:intron | 15.0% |
| !!! | TAGATTTTGTTTAATAATTC+AGG | + | chr8.2:31449834-31449853 | MS.gene066472:intron | 15.0% |
| !!! | TCTAAATTTTGTTAAAATCA+CGG | + | chr8.2:31448528-31448547 | MS.gene066472:intron | 15.0% |
| !!! | TTTTAACAAAATTTAGACTT+TGG | - | chr8.2:31448525-31448544 | None:intergenic | 15.0% |
| !! | ATATTTATAAGCAAGTTTAG+GGG | + | chr8.2:31449752-31449771 | MS.gene066472:intron | 20.0% |
| !! | CATAGATATGAAATGATTTA+GGG | + | chr8.2:31448270-31448289 | MS.gene066472:intron | 20.0% |
| !! | CATATTTATAAGCAAGTTTA+GGG | + | chr8.2:31449751-31449770 | MS.gene066472:intron | 20.0% |
| !! | TCATAGATATGAAATGATTT+AGG | + | chr8.2:31448269-31448288 | MS.gene066472:intron | 20.0% |
| !! | TTTAAAAAGAAAATCATGCT+CGG | - | chr8.2:31449713-31449732 | None:intergenic | 20.0% |
| !!! | ATTTTATCTTGTAGGAAATT+AGG | + | chr8.2:31448301-31448320 | MS.gene066472:intron | 20.0% |
| !!! | TAGTTTTTAGATTAACCTAA+AGG | + | chr8.2:31448681-31448700 | MS.gene066472:intron | 20.0% |
| !!! | TTCTGTTTTTAAGAATTACT+GGG | + | chr8.2:31448815-31448834 | MS.gene066472:intron | 20.0% |
| !!! | TTTCTGTTTTTAAGAATTAC+TGG | + | chr8.2:31448814-31448833 | MS.gene066472:intron | 20.0% |
| !!! | TTTTGTTTAATAATTCAGGT+TGG | + | chr8.2:31449838-31449857 | MS.gene066472:intron | 20.0% |
| ! | AAACCATTCTATAAACCTTT+AGG | - | chr8.2:31448699-31448718 | None:intergenic | 25.0% |
| ! | ATATCTATGAAGCACAAATA+CGG | - | chr8.2:31448259-31448278 | None:intergenic | 25.0% |
| ! | GCATATTTATAAGCAAGTTT+AGG | + | chr8.2:31449750-31449769 | MS.gene066472:intron | 25.0% |
| ! | TAACCTAAAGGTTTATAGAA+TGG | + | chr8.2:31448693-31448712 | MS.gene066472:intron | 25.0% |
| ! | TATTAAACAAAATCTAGCTG+AGG | - | chr8.2:31449830-31449849 | None:intergenic | 25.0% |
| !! | ACTTTTGGATTTTATCTTGT+AGG | + | chr8.2:31448293-31448312 | MS.gene066472:intron | 25.0% |
| !! | TTTTCTACTACATGTATGTT+TGG | - | chr8.2:31449658-31449677 | None:intergenic | 25.0% |
| !!! | CTTAATTTACTTGGTGTTAA+GGG | + | chr8.2:31449904-31449923 | MS.gene066472:CDS | 25.0% |
| !!! | TCTGTTTTTAAGAATTACTG+GGG | + | chr8.2:31448816-31448835 | MS.gene066472:intron | 25.0% |
| !!! | TCTTAATTTACTTGGTGTTA+AGG | + | chr8.2:31449903-31449922 | MS.gene066472:CDS | 25.0% |
| AAAACAACTGTTTGTCAAAG+AGG | - | chr8.2:31448647-31448666 | None:intergenic | 30.0% | |
| AAGAAGAGCGAAAATATGTT+TGG | + | chr8.2:31448448-31448467 | MS.gene066472:intron | 30.0% | |
| AATAGGATCCAATTTATGGA+GGG | + | chr8.2:31448751-31448770 | MS.gene066472:intron | 30.0% | |
| AATGTTTGTCTTTGATCCAA+TGG | + | chr8.2:31448393-31448412 | MS.gene066472:intron | 30.0% | |
| AATTTATGTACCTCAATGGA+AGG | - | chr8.2:31449553-31449572 | None:intergenic | 30.0% | |
| ATAACTGGAAAATCTCTAGA+AGG | + | chr8.2:31447664-31447683 | MS.gene066472:CDS | 30.0% | |
| ATTGCAAAATCAGTTGTCAT+CGG | + | chr8.2:31447559-31447578 | MS.gene066472:CDS | 30.0% | |
| CACTAATTTATGTACCTCAA+TGG | - | chr8.2:31449557-31449576 | None:intergenic | 30.0% | |
| CATGTATGTTTGGCTAAAAA+TGG | - | chr8.2:31449648-31449667 | None:intergenic | 30.0% | |
| CATTGAGGTACATAAATTAG+TGG | + | chr8.2:31449555-31449574 | MS.gene066472:intron | 30.0% | |
| GCAAGTGTATCAAAATTAAG+CGG | - | chr8.2:31447991-31448010 | None:intergenic | 30.0% | |
| TAGCTGAGGATACAATAAAA+TGG | - | chr8.2:31449816-31449835 | None:intergenic | 30.0% | |
| TCAGCTTGTCTTAATTTACT+TGG | + | chr8.2:31449895-31449914 | MS.gene066472:CDS | 30.0% | |
| TCTCAAATTATTAGCAGTGT+CGG | + | chr8.2:31448204-31448223 | MS.gene066472:intron | 30.0% | |
| TGTAAAGCTATTCATGTTTC+TGG | + | chr8.2:31447862-31447881 | MS.gene066472:CDS | 30.0% | |
| TTAAAATGTGAACCAACCAA+CGG | - | chr8.2:31448373-31448392 | None:intergenic | 30.0% | |
| TTAGGGGAGCTAAATTAAAA+GGG | + | chr8.2:31449768-31449787 | MS.gene066472:intron | 30.0% | |
| TTCGATTACGATTCGATATT+GGG | + | chr8.2:31447703-31447722 | MS.gene066472:CDS | 30.0% | |
| TTCTCACTGTATTACTATGA+TGG | + | chr8.2:31449483-31449502 | MS.gene066472:CDS | 30.0% | |
| TTGCGTTATGAGTTATTAGT+AGG | + | chr8.2:31448083-31448102 | MS.gene066472:intron | 30.0% | |
| TTTAGGGGAGCTAAATTAAA+AGG | + | chr8.2:31449767-31449786 | MS.gene066472:intron | 30.0% | |
| TTTCGATTACGATTCGATAT+TGG | + | chr8.2:31447702-31447721 | MS.gene066472:CDS | 30.0% | |
| ! | TGAAATGATTTAGGGACTTT+TGG | + | chr8.2:31448278-31448297 | MS.gene066472:intron | 30.0% |
| !! | ACAATTTAATGGGTTTGTTC+AGG | + | chr8.2:31448884-31448903 | MS.gene066472:intron | 30.0% |
| !!! | TATAGAATGGTTTTAGCTGT+TGG | + | chr8.2:31448706-31448725 | MS.gene066472:intron | 30.0% |
| AAATTCTTGCCAGCAATTGT+AGG | - | chr8.2:31448943-31448962 | None:intergenic | 35.0% | |
| AACATGCTTAAGAACCTAAC+TGG | + | chr8.2:31449355-31449374 | MS.gene066472:CDS | 35.0% | |
| AATGTATTCATGCACACTGT+TGG | + | chr8.2:31449178-31449197 | MS.gene066472:intron | 35.0% | |
| ACAACTTCATAGATCTTCAC+CGG | - | chr8.2:31447505-31447524 | None:intergenic | 35.0% | |
| ACATAAATTAGTGGTCCCTT+TGG | + | chr8.2:31449564-31449583 | MS.gene066472:intron | 35.0% | |
| CAATAGGATCCAATTTATGG+AGG | + | chr8.2:31448750-31448769 | MS.gene066472:intron | 35.0% | |
| CTGGGGTTGTTCAATTAAAA+CGG | + | chr8.2:31448833-31448852 | MS.gene066472:intron | 35.0% | |
| GAAATACAACAGATCTAGCA+GGG | + | chr8.2:31450053-31450072 | MS.gene066472:CDS | 35.0% | |
| GAAGAAACCTAGAAGGTAAA+CGG | - | chr8.2:31447332-31447351 | None:intergenic | 35.0% | |
| GGAATTTGAACAAACCCTAT+CGG | - | chr8.2:31447745-31447764 | None:intergenic | 35.0% | |
| GGTCAATAGGATCCAATTTA+TGG | + | chr8.2:31448747-31448766 | MS.gene066472:intron | 35.0% | |
| GTTAGTGACACAGAGAAAAA+CGG | - | chr8.2:31447173-31447192 | None:intergenic | 35.0% | |
| GTTTACCTTCTAGGTTTCTT+CGG | + | chr8.2:31447331-31447350 | MS.gene066472:CDS | 35.0% | |
| TGAAATACAACAGATCTAGC+AGG | + | chr8.2:31450052-31450071 | MS.gene066472:CDS | 35.0% | |
| TGATCCCTTGCAACATTATT+GGG | - | chr8.2:31448419-31448438 | None:intergenic | 35.0% | |
| TGGGGTTGTTCAATTAAAAC+GGG | + | chr8.2:31448834-31448853 | MS.gene066472:intron | 35.0% | |
| TTGATCCCTTGCAACATTAT+TGG | - | chr8.2:31448420-31448439 | None:intergenic | 35.0% | |
| TTGTTGCAAGTACCAATAGA+GGG | + | chr8.2:31447839-31447858 | MS.gene066472:CDS | 35.0% | |
| TTTCAATTCCAACCACAACA+AGG | - | chr8.2:31449149-31449168 | None:intergenic | 35.0% | |
| TTTCTGTTCTGACAAGAAAG+CGG | + | chr8.2:31449219-31449238 | MS.gene066472:CDS | 35.0% | |
| ! | AATAGCTTTACACCCTCTAT+TGG | - | chr8.2:31447854-31447873 | None:intergenic | 35.0% |
| ! | AGTCACTCTGAAGAAAATCA+AGG | - | chr8.2:31449038-31449057 | None:intergenic | 35.0% |
| ! | CTAGATTCTAAGGAATACGA+CGG | - | chr8.2:31447592-31447611 | None:intergenic | 35.0% |
| ! | GATAGGGTTTGTTCAAATTC+CGG | + | chr8.2:31447744-31447763 | MS.gene066472:CDS | 35.0% |
| ! | TCTTCTGTTTTGCTTAGAGA+TGG | + | chr8.2:31447892-31447911 | MS.gene066472:CDS | 35.0% |
| ! | TCTTGTAGGAAATTAGGTTG+AGG | + | chr8.2:31448307-31448326 | MS.gene066472:intron | 35.0% |
| ! | TTTGGAGCTTCACAAAATCA+TGG | - | chr8.2:31448507-31448526 | None:intergenic | 35.0% |
| !! | AAAGCTATTCATGTTTCTGG+TGG | + | chr8.2:31447865-31447884 | MS.gene066472:CDS | 35.0% |
| !! | AATAATTCAGGTTGGTACTG+TGG | + | chr8.2:31449846-31449865 | MS.gene066472:intron | 35.0% |
| !! | ATAATTCAGGTTGGTACTGT+GGG | + | chr8.2:31449847-31449866 | MS.gene066472:intron | 35.0% |
| !! | CTTGTAGGAAATTAGGTTGA+GGG | + | chr8.2:31448308-31448327 | MS.gene066472:intron | 35.0% |
| !! | TGAGGGATTTGTTGATTGAA+TGG | + | chr8.2:31448325-31448344 | MS.gene066472:intron | 35.0% |
| !! | TGCTGAGTTGAAGTTTTTCT+TGG | + | chr8.2:31447960-31447979 | MS.gene066472:CDS | 35.0% |
| !!! | AGGAACGGTTTTAGGATTAA+AGG | - | chr8.2:31449129-31449148 | None:intergenic | 35.0% |
| AAAGAAGACTCTCGAAAACC+AGG | + | chr8.2:31447409-31447428 | MS.gene066472:CDS | 40.0% | |
| AATGGCCCAATAATGTTGCA+AGG | + | chr8.2:31448411-31448430 | MS.gene066472:intron | 40.0% | |
| AGAAAATCATGCTCGGTAAG+TGG | - | chr8.2:31449706-31449725 | None:intergenic | 40.0% | |
| AGTGTTGTGAAATGCCGATA+GGG | + | chr8.2:31447728-31447747 | MS.gene066472:CDS | 40.0% | |
| ATGGATGTCATTGGAATCTC+AGG | + | chr8.2:31449066-31449085 | MS.gene066472:CDS | 40.0% | |
| ATGGCCCAATAATGTTGCAA+GGG | + | chr8.2:31448412-31448431 | MS.gene066472:intron | 40.0% | |
| ATTCCAACCACAACAAGGAA+CGG | - | chr8.2:31449144-31449163 | None:intergenic | 40.0% | |
| ATTCCAATGACATCCATGTC+AGG | - | chr8.2:31449063-31449082 | None:intergenic | 40.0% | |
| ATTGAATGGATCCCTTGCAA+GGG | + | chr8.2:31448339-31448358 | MS.gene066472:intron | 40.0% | |
| CTTCTAGGTTTCTTCGGTAT+CGG | + | chr8.2:31447337-31447356 | MS.gene066472:CDS | 40.0% | |
| CTTGTTGCAAGTACCAATAG+AGG | + | chr8.2:31447838-31447857 | MS.gene066472:CDS | 40.0% | |
| GAGGAAGAGATTTAAGTCTC+CGG | - | chr8.2:31447069-31447088 | None:intergenic | 40.0% | |
| GATCTATGAAGTTGTTGCAC+CGG | + | chr8.2:31447510-31447529 | MS.gene066472:CDS | 40.0% | |
| GTCACTAACGCTGTATTCTT+CGG | + | chr8.2:31447184-31447203 | MS.gene066472:CDS | 40.0% | |
| TCGTAATCGAAACCTTCCAA+CGG | - | chr8.2:31447694-31447713 | None:intergenic | 40.0% | |
| TGAGGCTGTAATTAAGGAAG+AGG | + | chr8.2:31449285-31449304 | MS.gene066472:CDS | 40.0% | |
| TTCCAATGACATCCATGTCA+GGG | - | chr8.2:31449062-31449081 | None:intergenic | 40.0% | |
| TTGCAACATTATTGGGCCAT+TGG | - | chr8.2:31448412-31448431 | None:intergenic | 40.0% | |
| TTTAGCGAGAATCTCTTCGT+CGG | - | chr8.2:31447392-31447411 | None:intergenic | 40.0% | |
| TTTAGCTGTTGGAGTTGTTG+CGG | + | chr8.2:31448717-31448736 | MS.gene066472:intron | 40.0% | |
| TTTGCAATTTCCTCGTCTTC+CGG | - | chr8.2:31447547-31447566 | None:intergenic | 40.0% | |
| ! | ACCTGTTGTTAGGTTTTCGT+CGG | + | chr8.2:31447927-31447946 | MS.gene066472:CDS | 40.0% |
| ! | ATCTCTAGAAGGTTTACCGT+TGG | + | chr8.2:31447675-31447694 | MS.gene066472:CDS | 40.0% |
| ! | GTCTGCTAGTCTAGATTCTA+AGG | - | chr8.2:31447602-31447621 | None:intergenic | 40.0% |
| !! | GAAAGTGTTGAAGACTAGTG+TGG | + | chr8.2:31449315-31449334 | MS.gene066472:CDS | 40.0% |
| AAGGTCCTTGCCATCATTCA+CGG | - | chr8.2:31449512-31449531 | None:intergenic | 45.0% | |
| AATAGCCTAGCATTTGCACC+TGG | - | chr8.2:31449946-31449965 | None:intergenic | 45.0% | |
| AATCTCCAGGTGCAAATGCT+AGG | + | chr8.2:31449938-31449957 | MS.gene066472:CDS | 45.0% | |
| AGCATTCAGCCTACAATTGC+TGG | + | chr8.2:31448931-31448950 | MS.gene066472:CDS | 45.0% | |
| AGGTGCAAATGCTAGGCTAT+TGG | + | chr8.2:31449945-31449964 | MS.gene066472:CDS | 45.0% | |
| AGTTGAGTACACTGTTCCCA+TGG | + | chr8.2:31447798-31447817 | MS.gene066472:CDS | 45.0% | |
| ATCCAATTTATGGAGGGACG+AGG | + | chr8.2:31448757-31448776 | MS.gene066472:intron | 45.0% | |
| ATGTACCTCAATGGAAGGCA+TGG | - | chr8.2:31449548-31449567 | None:intergenic | 45.0% | |
| ATTCGATTCCGTTGCAGTAC+TGG | + | chr8.2:31448967-31448986 | MS.gene066472:CDS | 45.0% | |
| CAGCTGTGAACTGGATTGAA+GGG | + | chr8.2:31449242-31449261 | MS.gene066472:CDS | 45.0% | |
| CAGTGTTGTGAAATGCCGAT+AGG | + | chr8.2:31447727-31447746 | MS.gene066472:CDS | 45.0% | |
| CATGAAGAGGAGTTTCCGTA+CGG | - | chr8.2:31447261-31447280 | None:intergenic | 45.0% | |
| CCTAAAACCGTTCCTTGTTG+TGG | + | chr8.2:31449134-31449153 | MS.gene066472:intron | 45.0% | |
| CGATACCGAAGAAACCTAGA+AGG | - | chr8.2:31447339-31447358 | None:intergenic | 45.0% | |
| CTAGAAGGTTTACCGTTGGA+AGG | + | chr8.2:31447679-31447698 | MS.gene066472:CDS | 45.0% | |
| GAAAAACGGTCTGTGAAGTG+AGG | - | chr8.2:31447159-31447178 | None:intergenic | 45.0% | |
| GAAACCTAGAAGGTAAACGG+CGG | - | chr8.2:31447329-31447348 | None:intergenic | 45.0% | |
| GAACTCTCAACATTCTGAGC+AGG | - | chr8.2:31449466-31449485 | None:intergenic | 45.0% | |
| GATTGAATGGATCCCTTGCA+AGG | + | chr8.2:31448338-31448357 | MS.gene066472:intron | 45.0% | |
| GCATGGTGACAGAAATGTGA+AGG | - | chr8.2:31449531-31449550 | None:intergenic | 45.0% | |
| GGAGGCTATAAGAGAAACGA+TGG | - | chr8.2:31447308-31447327 | None:intergenic | 45.0% | |
| GGCTATAAGAGAAACGATGG+CGG | - | chr8.2:31447305-31447324 | None:intergenic | 45.0% | |
| GGCTGTAATTAAGGAAGAGG+TGG | + | chr8.2:31449288-31449307 | MS.gene066472:CDS | 45.0% | |
| GGTGTGTGAGGCTGTAATTA+AGG | + | chr8.2:31449279-31449298 | MS.gene066472:CDS | 45.0% | |
| GTTTGGATTGATCGCGAGTT+TGG | + | chr8.2:31448465-31448484 | MS.gene066472:intron | 45.0% | |
| TACAGAGGGACAATATGGAG+AGG | + | chr8.2:31448601-31448620 | MS.gene066472:intron | 45.0% | |
| TCAACTCCATCCAACAACAG+TGG | - | chr8.2:31447784-31447803 | None:intergenic | 45.0% | |
| TGAAGCACAAATACGGACAC+TGG | - | chr8.2:31448252-31448271 | None:intergenic | 45.0% | |
| TGGTAAATCTGTGGTGTGTG+AGG | + | chr8.2:31449267-31449286 | MS.gene066472:CDS | 45.0% | |
| TTCCCTGACATGGATGTCAT+TGG | + | chr8.2:31449057-31449076 | MS.gene066472:CDS | 45.0% | |
| ! | AAACCGTTCCTTGTTGTGGT+TGG | + | chr8.2:31449138-31449157 | MS.gene066472:intron | 45.0% |
| ! | AGTGTTGAAGACTAGTGTGG+AGG | + | chr8.2:31449318-31449337 | MS.gene066472:CDS | 45.0% |
| ! | ATGATGGAACCCGTGAATGA+TGG | + | chr8.2:31449499-31449518 | MS.gene066472:CDS | 45.0% |
| ! | CCACAACAAGGAACGGTTTT+AGG | - | chr8.2:31449137-31449156 | None:intergenic | 45.0% |
| ! | CTGTGAAGTGAGGTTTTCTC+CGG | - | chr8.2:31447149-31447168 | None:intergenic | 45.0% |
| ! | GGGATGAACATGGTGTCAAA+AGG | + | chr8.2:31449000-31449019 | MS.gene066472:CDS | 45.0% |
| ! | GGGTTTGTTCAAATTCCGGT+TGG | + | chr8.2:31447748-31447767 | MS.gene066472:CDS | 45.0% |
| ! | TATAAGAGAAACGATGGCGG+CGG | - | chr8.2:31447302-31447321 | None:intergenic | 45.0% |
| ! | TGACTAGAGCACCTGTTGTT+AGG | + | chr8.2:31447917-31447936 | MS.gene066472:CDS | 45.0% |
| ! | TGGTAAGCTTCTGGGTTTTG+AGG | - | chr8.2:31447117-31447136 | None:intergenic | 45.0% |
| !! | ACTGTTGGTTTGATTGTGGC+AGG | + | chr8.2:31449193-31449212 | MS.gene066472:intron | 45.0% |
| !! | GCACACTGTTGGTTTGATTG+TGG | + | chr8.2:31449189-31449208 | MS.gene066472:intron | 45.0% |
| !! | TCAAATTCCGGTTGGTGTTG+CGG | + | chr8.2:31447756-31447775 | MS.gene066472:CDS | 45.0% |
| AACATGGAGAGGGGATACAG+AGG | + | chr8.2:31448586-31448605 | MS.gene066472:intron | 50.0% | |
| ACATGGAGAGGGGATACAGA+GGG | + | chr8.2:31448587-31448606 | MS.gene066472:intron | 50.0% | |
| ACGATTGGAGTTACCGTTGC+CGG | - | chr8.2:31447478-31447497 | None:intergenic | 50.0% | |
| ACTAGCAGACTGCCGTAAAG+CGG | + | chr8.2:31447612-31447631 | MS.gene066472:CDS | 50.0% | |
| AGACATGAGTGATAGCTCGC+CGG | - | chr8.2:31449998-31450017 | None:intergenic | 50.0% | |
| AGGTCCTTGCCATCATTCAC+GGG | - | chr8.2:31449511-31449530 | None:intergenic | 50.0% | |
| ATCTTCACCGGAGCTACGAT+TGG | - | chr8.2:31447493-31447512 | None:intergenic | 50.0% | |
| ATGGAGGGACGAGGTCATAT+AGG | + | chr8.2:31448766-31448785 | MS.gene066472:intron | 50.0% | |
| ATTCTGAGCAGGATCCTGAC+CGG | - | chr8.2:31449455-31449474 | None:intergenic | 50.0% | |
| CTATTGGCCACCATTGTAGC+TGG | + | chr8.2:31449961-31449980 | MS.gene066472:CDS | 50.0% | |
| CTCATGTCTGCAATTGCAGC+TGG | + | chr8.2:31450009-31450028 | MS.gene066472:CDS | 50.0% | |
| CTGTATCCCCTCTCCATGTT+TGG | - | chr8.2:31448586-31448605 | None:intergenic | 50.0% | |
| GACCTCGTCCCTCCATAAAT+TGG | - | chr8.2:31448762-31448781 | None:intergenic | 50.0% | |
| GAGACTGTGACGACATGAAG+AGG | - | chr8.2:31447274-31447293 | None:intergenic | 50.0% | |
| GCAGCTGTGAACTGGATTGA+AGG | + | chr8.2:31449241-31449260 | MS.gene066472:CDS | 50.0% | |
| GCCGACGAAAACCTAACAAC+AGG | - | chr8.2:31447931-31447950 | None:intergenic | 50.0% | |
| GGGGATACAGAGGGACAATA+TGG | + | chr8.2:31448596-31448615 | MS.gene066472:intron | 50.0% | |
| GGTAACTCCAATCGTAGCTC+CGG | + | chr8.2:31447483-31447502 | MS.gene066472:CDS | 50.0% | |
| GTGGAGGAGAAAATACGCGA+CGG | - | chr8.2:31447221-31447240 | None:intergenic | 50.0% | |
| TACCGAACCAGCTACAATGG+TGG | - | chr8.2:31449971-31449990 | None:intergenic | 50.0% | |
| TACGGATCTTCTCACGCCAA+CGG | - | chr8.2:31447243-31447262 | None:intergenic | 50.0% | |
| TCAGAGTGACTTCCCTGACA+TGG | + | chr8.2:31449047-31449066 | MS.gene066472:CDS | 50.0% | |
| TCAGCGGTGCAAACGATAAC+TGG | + | chr8.2:31447649-31447668 | MS.gene066472:CDS | 50.0% | |
| TCGACAAGTGATGCTGGACA+CGG | - | chr8.2:31447436-31447455 | None:intergenic | 50.0% | |
| TCGCGAGTTTGGCTAAGTCA+TGG | + | chr8.2:31448476-31448495 | MS.gene066472:intron | 50.0% | |
| TCTCACTGCCAGTCCAAACA+TGG | + | chr8.2:31448570-31448589 | MS.gene066472:intron | 50.0% | |
| TCTGCTGTCTACATAGCCAC+CGG | + | chr8.2:31449433-31449452 | MS.gene066472:CDS | 50.0% | |
| TCTTCCGGTGTGAGATTCAC+CGG | - | chr8.2:31447532-31447551 | None:intergenic | 50.0% | |
| TGACACCATGTTCATCCCCA+TGG | - | chr8.2:31448998-31449017 | None:intergenic | 50.0% | |
| TGATGCCATGGGGATGAACA+TGG | + | chr8.2:31448990-31449009 | MS.gene066472:CDS | 50.0% | |
| TGCAACAAGACACCCTTCAG+TGG | - | chr8.2:31447827-31447846 | None:intergenic | 50.0% | |
| TGCCAGTCCAAACATGGAGA+GGG | + | chr8.2:31448576-31448595 | MS.gene066472:intron | 50.0% | |
| TGGCATCACCAGTACTGCAA+CGG | - | chr8.2:31448978-31448997 | None:intergenic | 50.0% | |
| TGTCACCATGCCTTCCATTG+AGG | + | chr8.2:31449540-31449559 | MS.gene066472:CDS | 50.0% | |
| TTCCCATGGCTACCACTGAA+GGG | + | chr8.2:31447812-31447831 | MS.gene066472:CDS | 50.0% | |
| TTGCGGATGGAGAGGTCAAT+AGG | + | chr8.2:31448734-31448753 | MS.gene066472:intron | 50.0% | |
| TTGGCGTGAGAAGATCCGTA+CGG | + | chr8.2:31447243-31447262 | MS.gene066472:CDS | 50.0% | |
| ! | CGTATTTTCTCCTCCACCGT+TGG | + | chr8.2:31447224-31447243 | MS.gene066472:CDS | 50.0% |
| ! | TGAAGGGCGTGGTAAATCTG+TGG | + | chr8.2:31449258-31449277 | MS.gene066472:CDS | 50.0% |
| ! | TGAAGTGAGGTTTTCTCCGG+TGG | - | chr8.2:31447146-31447165 | None:intergenic | 50.0% |
| !! | ATTCAGGTTGGTACTGTGGG+AGG | + | chr8.2:31449850-31449869 | MS.gene066472:intron | 50.0% |
| !! | CAAATTCCGGTTGGTGTTGC+GGG | + | chr8.2:31447757-31447776 | MS.gene066472:CDS | 50.0% |
| !! | GAGTACCGAACCAGCTACAA+TGG | - | chr8.2:31449974-31449993 | None:intergenic | 50.0% |
| !! | TGCAGTACTGGTGATGCCAT+GGG | + | chr8.2:31448979-31448998 | MS.gene066472:CDS | 50.0% |
| !! | TTCAGGTTGGTACTGTGGGA+GGG | + | chr8.2:31449851-31449870 | MS.gene066472:intron | 50.0% |
| !! | TTGCAGTACTGGTGATGCCA+TGG | + | chr8.2:31448978-31448997 | MS.gene066472:CDS | 50.0% |
| AAGCTTACCACCACCACCAC+CGG | + | chr8.2:31447127-31447146 | MS.gene066472:CDS | 55.0% | |
| ACACCCTTCAGTGGTAGCCA+TGG | - | chr8.2:31447818-31447837 | None:intergenic | 55.0% | |
| ACCTAGAAGGTAAACGGCGG+AGG | - | chr8.2:31447326-31447345 | None:intergenic | 55.0% | |
| AGAAAGCGGCAGCTGTGAAC+TGG | + | chr8.2:31449233-31449252 | MS.gene066472:CDS | 55.0% | |
| ATTGGAGTTACCGTTGCCGG+TGG | - | chr8.2:31447475-31447494 | None:intergenic | 55.0% | |
| CACCCTTCAGTGGTAGCCAT+GGG | - | chr8.2:31447817-31447836 | None:intergenic | 55.0% | |
| CACCGACGTAAAACCACCAC+CGG | + | chr8.2:31447456-31447475 | MS.gene066472:CDS | 55.0% | |
| CAGCAAGGGCTGATCCAGTT+AGG | - | chr8.2:31449372-31449391 | None:intergenic | 55.0% | |
| CGGATCACGTACTTCCTTCC+CGG | + | chr8.2:31447357-31447376 | MS.gene066472:CDS | 55.0% | |
| CGTAAAACCACCACCGGCAA+CGG | + | chr8.2:31447462-31447481 | MS.gene066472:CDS | 55.0% | |
| CTAACTGGATCAGCCCTTGC+TGG | + | chr8.2:31449370-31449389 | MS.gene066472:CDS | 55.0% | |
| CTGCCAGTCCAAACATGGAG+AGG | + | chr8.2:31448575-31448594 | MS.gene066472:intron | 55.0% | |
| GAATCTCACACCGGAAGACG+AGG | + | chr8.2:31447534-31447553 | MS.gene066472:CDS | 55.0% | |
| GCCAGTCCAAACATGGAGAG+GGG | + | chr8.2:31448577-31448596 | MS.gene066472:intron | 55.0% | |
| GCTGTTGGAGTTGTTGCGGA+TGG | + | chr8.2:31448721-31448740 | MS.gene066472:intron | 55.0% | |
| GGAACCCGTGAATGATGGCA+AGG | + | chr8.2:31449504-31449523 | MS.gene066472:CDS | 55.0% | |
| GGCCACCATTGTAGCTGGTT+CGG | + | chr8.2:31449966-31449985 | MS.gene066472:CDS | 55.0% | |
| GTGAACTGGATTGAAGGGCG+TGG | + | chr8.2:31449247-31449266 | MS.gene066472:CDS | 55.0% | |
| GTTCCCATGGCTACCACTGA+AGG | + | chr8.2:31447811-31447830 | MS.gene066472:CDS | 55.0% | |
| TCCCCTCTCCATGTTTGGAC+TGG | - | chr8.2:31448581-31448600 | None:intergenic | 55.0% | |
| TCTTCGTCGGAGAGATCGTC+CGG | - | chr8.2:31447379-31447398 | None:intergenic | 55.0% | |
| TGCACCTGGAGATTCTGTGC+TGG | - | chr8.2:31449932-31449951 | None:intergenic | 55.0% | |
| TGGAGTTGTTGCGGATGGAG+AGG | + | chr8.2:31448726-31448745 | MS.gene066472:intron | 55.0% | |
| TGTCTACATAGCCACCGGTC+AGG | + | chr8.2:31449438-31449457 | MS.gene066472:CDS | 55.0% | |
| TGTTGCGGGTCCACTGTTGT+TGG | + | chr8.2:31447771-31447790 | MS.gene066472:CDS | 55.0% | |
| ! | AGTGAGGTTTTCTCCGGTGG+TGG | - | chr8.2:31447143-31447162 | None:intergenic | 55.0% |
| ! | GAAGACTAGTGTGGAGGCAC+TGG | + | chr8.2:31449324-31449343 | MS.gene066472:CDS | 55.0% |
| ! | GACGTATTGCCGCCGCTTTA+CGG | - | chr8.2:31447627-31447646 | None:intergenic | 55.0% |
| ! | TGCACCGGTGAATCTCACAC+CGG | + | chr8.2:31447525-31447544 | MS.gene066472:CDS | 55.0% |
| !! | GCAGTACTGGTGATGCCATG+GGG | + | chr8.2:31448980-31448999 | MS.gene066472:CDS | 55.0% |
| !! | GGTGGTGGTGGTAAGCTTCT+GGG | - | chr8.2:31447125-31447144 | None:intergenic | 55.0% |
| !! | TCAGGTTGGTACTGTGGGAG+GGG | + | chr8.2:31449852-31449871 | MS.gene066472:intron | 55.0% |
| !! | TCGGTGTCGACAAGTGATGC+TGG | - | chr8.2:31447442-31447461 | None:intergenic | 55.0% |
| !! | TGCCGGTGGTGGTTTTACGT+CGG | - | chr8.2:31447461-31447480 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTGGTAAGCTTC+TGG | - | chr8.2:31447126-31447145 | None:intergenic | 55.0% |
| !!! | GGTTTTGAGGTTTTCGCCGC+CGG | - | chr8.2:31447104-31447123 | None:intergenic | 55.0% |
| ACGGTCCTGCAACCCTTGCA+AGG | - | chr8.2:31448354-31448373 | None:intergenic | 60.0% | |
| AGCAGACTGCCGTAAAGCGG+CGG | + | chr8.2:31447615-31447634 | MS.gene066472:CDS | 60.0% | |
| AGCCCTTGCTGGTGCTCTTG+GGG | + | chr8.2:31449381-31449400 | MS.gene066472:CDS | 60.0% | |
| AGGGTTGCAGGACCGTTGGT+TGG | + | chr8.2:31448358-31448377 | MS.gene066472:intron | 60.0% | |
| AGTGATGCTGGACACGGTCC+TGG | - | chr8.2:31447430-31447449 | None:intergenic | 60.0% | |
| AGTGGACCCGCAACACCAAC+CGG | - | chr8.2:31447766-31447785 | None:intergenic | 60.0% | |
| CAGCCCTTGCTGGTGCTCTT+GGG | + | chr8.2:31449380-31449399 | MS.gene066472:CDS | 60.0% | |
| CGGTCCTGCAACCCTTGCAA+GGG | - | chr8.2:31448353-31448372 | None:intergenic | 60.0% | |
| CTTCGTCGGAGAGATCGTCC+GGG | - | chr8.2:31447378-31447397 | None:intergenic | 60.0% | |
| GCCTCCGCCGTTTACCTTCT+AGG | + | chr8.2:31447322-31447341 | MS.gene066472:CDS | 60.0% | |
| GCGGGTCCACTGTTGTTGGA+TGG | + | chr8.2:31447775-31447794 | MS.gene066472:CDS | 60.0% | |
| GGATCCCTTGCAAGGGTTGC+AGG | + | chr8.2:31448346-31448365 | MS.gene066472:intron | 60.0% | |
| GGATCTTCTCACGCCAACGG+TGG | - | chr8.2:31447240-31447259 | None:intergenic | 60.0% | |
| GGCGGCAATACGTCGTTCAG+CGG | + | chr8.2:31447633-31447652 | MS.gene066472:CDS | 60.0% | |
| TCAGCCCTTGCTGGTGCTCT+TGG | + | chr8.2:31449379-31449398 | MS.gene066472:CDS | 60.0% | |
| TCTTCTCACGCCAACGGTGG+AGG | - | chr8.2:31447237-31447256 | None:intergenic | 60.0% | |
| TGCAAGGGTTGCAGGACCGT+TGG | + | chr8.2:31448354-31448373 | MS.gene066472:intron | 60.0% | |
| !! | CAGGTTGGTACTGTGGGAGG+GGG | + | chr8.2:31449853-31449872 | MS.gene066472:intron | 60.0% |
| !! | GAGGTTTTCTCCGGTGGTGG+TGG | - | chr8.2:31447140-31447159 | None:intergenic | 60.0% |
| !! | GTAGCTGGTTCGGTACTCGC+CGG | + | chr8.2:31449976-31449995 | MS.gene066472:CDS | 60.0% |
| !! | TTTGAGGTTTTCGCCGCCGG+CGG | - | chr8.2:31447101-31447120 | None:intergenic | 60.0% |
| !!! | GTTTTCTCCGGTGGTGGTGG+TGG | - | chr8.2:31447137-31447156 | None:intergenic | 60.0% |
| CCCTTGCTGGTGCTCTTGGG+GGG | + | chr8.2:31449383-31449402 | MS.gene066472:CDS | 65.0% | |
| CTGAGCAGGATCCTGACCGG+TGG | - | chr8.2:31449452-31449471 | None:intergenic | 65.0% | |
| CTTCCTCCACGTTCTCCCGC+CGG | + | chr8.2:31447082-31447101 | MS.gene066472:CDS | 65.0% | |
| GCCCTTGCTGGTGCTCTTGG+GGG | + | chr8.2:31449382-31449401 | MS.gene066472:CDS | 65.0% | |
| GGAGTTACCGTTGCCGGTGG+TGG | - | chr8.2:31447472-31447491 | None:intergenic | 65.0% | |
| GGCGCCAGCACAGAATCTCC+AGG | + | chr8.2:31449925-31449944 | MS.gene066472:CDS | 65.0% | |
| GTCGGAGAGATCGTCCGGGA+AGG | - | chr8.2:31447374-31447393 | None:intergenic | 65.0% | |
| ! | TTGAGGTTTTCGCCGCCGGC+GGG | - | chr8.2:31447100-31447119 | None:intergenic | 65.0% |
| !! | ACCCCCCAAGAGCACCAGCA+AGG | - | chr8.2:31449387-31449406 | None:intergenic | 65.0% |
| !! | CCCCCCAAGAGCACCAGCAA+GGG | - | chr8.2:31449386-31449405 | None:intergenic | 65.0% |
| CCTCCACGTTCTCCCGCCGG+CGG | + | chr8.2:31447085-31447104 | MS.gene066472:CDS | 75.0% | |
| ! | CCGCCGGCGGGAGAACGTGG+AGG | - | chr8.2:31447088-31447107 | None:intergenic | 80.0% |
| ! | TCGCCGCCGGCGGGAGAACG+TGG | - | chr8.2:31447091-31447110 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 31447055 | 31450098 | 31447055 | ID=MS.gene066472 |
| chr8.2 | mRNA | 31447055 | 31450098 | 31447055 | ID=MS.gene066472.t1;Parent=MS.gene066472 |
| chr8.2 | exon | 31447055 | 31448025 | 31447055 | ID=MS.gene066472.t1.exon1;Parent=MS.gene066472.t1 |
| chr8.2 | CDS | 31447055 | 31448025 | 31447055 | ID=cds.MS.gene066472.t1;Parent=MS.gene066472.t1 |
| chr8.2 | exon | 31448906 | 31449087 | 31448906 | ID=MS.gene066472.t1.exon2;Parent=MS.gene066472.t1 |
| chr8.2 | CDS | 31448906 | 31449087 | 31448906 | ID=cds.MS.gene066472.t1;Parent=MS.gene066472.t1 |
| chr8.2 | exon | 31449215 | 31449561 | 31449215 | ID=MS.gene066472.t1.exon3;Parent=MS.gene066472.t1 |
| chr8.2 | CDS | 31449215 | 31449561 | 31449215 | ID=cds.MS.gene066472.t1;Parent=MS.gene066472.t1 |
| chr8.2 | exon | 31449856 | 31450098 | 31449856 | ID=MS.gene066472.t1.exon4;Parent=MS.gene066472.t1 |
| chr8.2 | CDS | 31449856 | 31450098 | 31449856 | ID=cds.MS.gene066472.t1;Parent=MS.gene066472.t1 |
| Gene Sequence |
| Protein sequence |
