Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066539.t1 | XP_013467265.1 | 82.4 | 585 | 97 | 4 | 1 | 584 | 1 | 580 | 2.50E-273 | 951 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066539.t1 | Q5XQC7 | 67.8 | 581 | 176 | 5 | 1 | 572 | 1 | 579 | 6.3e-225 | 781.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066539.t1 | A0A072VGY2 | 82.4 | 585 | 97 | 4 | 1 | 584 | 1 | 580 | 1.8e-273 | 951.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066539 | MS.gene70112 | PPI |
| MS.gene066539 | MS.gene49772 | PPI |
| MS.gene000424 | MS.gene066539 | PPI |
| MS.gene030511 | MS.gene066539 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066539.t1 | MTR_1g048160 | 82.253 | 586 | 98 | 4 | 1 | 585 | 1 | 581 | 0.0 | 995 |
| MS.gene066539.t1 | MTR_7g114130 | 82.112 | 587 | 99 | 4 | 1 | 584 | 1 | 584 | 0.0 | 992 |
| MS.gene066539.t1 | MTR_7g114100 | 82.403 | 466 | 29 | 4 | 120 | 585 | 6 | 418 | 0.0 | 749 |
| MS.gene066539.t1 | MTR_8g096190 | 59.758 | 579 | 223 | 7 | 1 | 571 | 1 | 577 | 0.0 | 697 |
| MS.gene066539.t1 | MTR_8g096190 | 58.909 | 550 | 216 | 7 | 1 | 542 | 1 | 548 | 0.0 | 651 |
| MS.gene066539.t1 | MTR_8g096190 | 57.663 | 522 | 211 | 7 | 1 | 514 | 1 | 520 | 0.0 | 602 |
| MS.gene066539.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 2.08e-22 | 100 |
| MS.gene066539.t1 | MTR_7g033100 | 30.924 | 249 | 128 | 8 | 335 | 560 | 107 | 334 | 3.62e-22 | 99.4 |
| MS.gene066539.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 5.87e-21 | 96.7 |
| MS.gene066539.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 125 | 352 | 6.15e-21 | 96.7 |
| MS.gene066539.t1 | MTR_3g086520 | 32.129 | 249 | 125 | 9 | 335 | 560 | 122 | 349 | 7.22e-21 | 96.3 |
| MS.gene066539.t1 | MTR_3g075530 | 30.249 | 281 | 138 | 13 | 329 | 573 | 88 | 346 | 2.09e-20 | 94.4 |
| MS.gene066539.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.77e-20 | 94.0 |
| MS.gene066539.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 104 | 352 | 3.88e-20 | 94.0 |
| MS.gene066539.t1 | MTR_3g096520 | 31.111 | 270 | 136 | 10 | 320 | 560 | 87 | 335 | 3.93e-20 | 93.6 |
| MS.gene066539.t1 | MTR_8g089670 | 30.522 | 249 | 129 | 8 | 335 | 560 | 132 | 359 | 7.49e-20 | 93.2 |
| MS.gene066539.t1 | MTR_6g021730 | 30.120 | 249 | 130 | 8 | 335 | 560 | 127 | 354 | 1.13e-19 | 92.8 |
| MS.gene066539.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.20e-18 | 87.4 |
| MS.gene066539.t1 | MTR_8g447220 | 29.437 | 231 | 122 | 7 | 335 | 547 | 80 | 287 | 1.74e-18 | 88.6 |
| MS.gene066539.t1 | MTR_2g063843 | 27.402 | 281 | 151 | 9 | 335 | 585 | 87 | 344 | 2.19e-18 | 88.2 |
| MS.gene066539.t1 | MTR_6g092020 | 27.941 | 272 | 141 | 9 | 335 | 574 | 74 | 322 | 3.59e-18 | 87.4 |
| MS.gene066539.t1 | MTR_6g092100 | 31.282 | 195 | 106 | 5 | 335 | 513 | 29 | 211 | 1.21e-17 | 84.3 |
| MS.gene066539.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 2.34e-17 | 85.1 |
| MS.gene066539.t1 | MTR_2g063907 | 27.692 | 260 | 140 | 8 | 335 | 569 | 81 | 317 | 2.53e-17 | 84.7 |
| MS.gene066539.t1 | MTR_2g063857 | 27.636 | 275 | 141 | 9 | 335 | 574 | 95 | 346 | 3.31e-17 | 84.3 |
| MS.gene066539.t1 | MTR_7g081170 | 27.439 | 164 | 100 | 4 | 364 | 518 | 85 | 238 | 6.45e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066539.t1 | AT1G08860 | 67.814 | 581 | 176 | 5 | 1 | 572 | 1 | 579 | 0.0 | 820 |
| MS.gene066539.t1 | AT5G61910 | 59.310 | 580 | 226 | 6 | 1 | 573 | 769 | 1345 | 0.0 | 696 |
| MS.gene066539.t1 | AT5G61900 | 59.310 | 580 | 226 | 6 | 1 | 573 | 1 | 577 | 0.0 | 691 |
| MS.gene066539.t1 | AT5G61900 | 59.310 | 580 | 226 | 6 | 1 | 573 | 1 | 577 | 0.0 | 691 |
| MS.gene066539.t1 | AT5G07300 | 56.995 | 579 | 236 | 7 | 1 | 569 | 1 | 576 | 0.0 | 665 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.50e-22 | 99.0 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.50e-22 | 99.0 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.50e-22 | 99.0 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 93 | 320 | 6.50e-22 | 99.0 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 7.07e-22 | 99.4 |
| MS.gene066539.t1 | AT1G67800 | 31.325 | 249 | 127 | 8 | 335 | 560 | 113 | 340 | 9.05e-22 | 98.6 |
| MS.gene066539.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.99e-21 | 97.4 |
| MS.gene066539.t1 | AT3G01650 | 30.924 | 249 | 128 | 8 | 335 | 560 | 156 | 383 | 3.99e-21 | 97.4 |
| MS.gene066539.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.84e-20 | 92.0 |
| MS.gene066539.t1 | AT5G63970 | 29.897 | 291 | 151 | 12 | 320 | 579 | 16 | 284 | 6.84e-20 | 92.0 |
| MS.gene066539.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.86e-20 | 92.8 |
| MS.gene066539.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.86e-20 | 92.8 |
| MS.gene066539.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.86e-20 | 92.8 |
| MS.gene066539.t1 | AT5G14420 | 30.418 | 263 | 132 | 11 | 335 | 568 | 122 | 362 | 9.86e-20 | 92.8 |
| MS.gene066539.t1 | AT1G79380 | 28.520 | 277 | 148 | 11 | 320 | 567 | 58 | 313 | 3.74e-19 | 90.5 |
Find 112 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCAGGACCCACTTTATT+TGG | 0.129342 | 7.1:+2459252 | MS.gene066539:CDS |
| TTGTAAAATCTAATGAATTT+TGG | 0.155477 | 7.1:-2460106 | None:intergenic |
| CTCTGTTGTGCAAGCTCTTC+TGG | 0.158420 | 7.1:+2459999 | MS.gene066539:CDS |
| AGACAAACTGGTTTCCATTT+TGG | 0.164153 | 7.1:-2457411 | None:intergenic |
| TCTGTTGCTTTGAAGCTTTA+AGG | 0.218660 | 7.1:-2456893 | None:intergenic |
| AGCAAGTAACTTGCTTGATA+TGG | 0.244073 | 7.1:+2455827 | MS.gene066539:CDS |
| CGGTTTCCTGCTTGGGGATT+TGG | 0.252676 | 7.1:+2458922 | MS.gene066539:CDS |
| AGATGGGAAATTTGAAGAAT+TGG | 0.254232 | 7.1:+2456029 | MS.gene066539:CDS |
| TGATAAGCGGTTTCCTGCTT+GGG | 0.290897 | 7.1:+2458915 | MS.gene066539:CDS |
| TGTGCAGCCAAGTTTATAAC+TGG | 0.295273 | 7.1:-2459276 | None:intergenic |
| CTTCTCTTGTCCTTTACGTT+TGG | 0.316488 | 7.1:-2457967 | None:intergenic |
| GATGGGAAATTTGAAGAATT+GGG | 0.319368 | 7.1:+2456030 | MS.gene066539:CDS |
| TTACGTAGTGTGACTCTATC+AGG | 0.343328 | 7.1:+2459237 | MS.gene066539:CDS |
| ATAACAATTTAAATCCAAAA+TGG | 0.353940 | 7.1:+2457397 | MS.gene066539:CDS |
| CTGCAAGATCAAGATTTCAT+TGG | 0.370990 | 7.1:+2456729 | MS.gene066539:CDS |
| TCAAAACACTCGATAACTAA+TGG | 0.374983 | 7.1:-2457746 | None:intergenic |
| ATAACTTCAGTCTTGCAAAT+AGG | 0.376188 | 7.1:-2457372 | None:intergenic |
| ATGCTTGTGGGAAATGGGAT+TGG | 0.380235 | 7.1:-2460083 | None:intergenic |
| TGCTGGAAATTAAGACAAAC+TGG | 0.380449 | 7.1:-2457423 | None:intergenic |
| CTGATAAGCGGTTTCCTGCT+TGG | 0.381905 | 7.1:+2458914 | MS.gene066539:CDS |
| AATCATGTTCGAAGAAATCT+TGG | 0.386088 | 7.1:+2456919 | MS.gene066539:CDS |
| CTGAAGAGACTGTTGCTTCA+AGG | 0.393400 | 7.1:+2456959 | MS.gene066539:CDS |
| TTTGGATGCTTGTGGGAAAT+GGG | 0.396015 | 7.1:-2460088 | None:intergenic |
| TGCTTGTGGGAAATGGGATT+GGG | 0.401782 | 7.1:-2460082 | None:intergenic |
| TGTCTTAATTTCCAGCAGTT+TGG | 0.404098 | 7.1:+2457429 | MS.gene066539:CDS |
| TGGATTTGAACTGAACTTCA+TGG | 0.405252 | 7.1:+2458064 | MS.gene066539:CDS |
| AGCAGCAATCATGTACTTAT+CGG | 0.411100 | 7.1:+2457779 | MS.gene066539:CDS |
| GGTTAAGCTCCGGCTTGGTT+TGG | 0.413516 | 7.1:-2456872 | None:intergenic |
| TTGCATTACATTGACGTATC+CGG | 0.413811 | 7.1:+2458221 | MS.gene066539:CDS |
| TATAAACTTGGCTGCACAAA+TGG | 0.416011 | 7.1:+2459281 | MS.gene066539:CDS |
| AAAATTTGTGTAGGCTATGA+TGG | 0.427229 | 7.1:+2458861 | MS.gene066539:intron |
| GGAAGGAATTGAAGGCATAA+TGG | 0.437267 | 7.1:+2459197 | MS.gene066539:CDS |
| TCTAAAGGGTCAACTCTTTG+TGG | 0.437821 | 7.1:+2457992 | MS.gene066539:CDS |
| TATAACTGGGCCAAATAAAG+TGG | 0.438129 | 7.1:-2459262 | None:intergenic |
| CTCATAGGATGGAATTGTTA+CGG | 0.441728 | 7.1:+2459473 | MS.gene066539:intron |
| GCCATTGTTCACACAAATTG+AGG | 0.443188 | 7.1:+2454393 | MS.gene066539:CDS |
| TTACTTTACTTCCAAACTGC+TGG | 0.443289 | 7.1:-2457440 | None:intergenic |
| CTTACTTTGTACTTCTCTCA+TGG | 0.444065 | 7.1:-2459769 | None:intergenic |
| TATCTTCCGTTGTTCTCGCT+TGG | 0.449110 | 7.1:+2456996 | MS.gene066539:CDS |
| ATTTGGCCCAGTTATAAACT+TGG | 0.451486 | 7.1:+2459269 | MS.gene066539:CDS |
| AACAGTCTCTTCAGCATGAA+TGG | 0.456759 | 7.1:-2456950 | None:intergenic |
| ATTCTTGATATCCTTAGAAA+AGG | 0.456825 | 7.1:-2457327 | None:intergenic |
| GTTTAGGTGGAAGGAATTGA+AGG | 0.464131 | 7.1:+2459189 | MS.gene066539:intron |
| TTTCCTGCTTGGGGATTTGG+AGG | 0.464729 | 7.1:+2458925 | MS.gene066539:CDS |
| CGAATTGTTTGAATCCAGAA+TGG | 0.467226 | 7.1:+2456070 | MS.gene066539:CDS |
| GGACAAGAGAAGGTTCTAAA+GGG | 0.468659 | 7.1:+2457978 | MS.gene066539:CDS |
| TTACTTTGTACTTCTCTCAT+GGG | 0.469535 | 7.1:-2459768 | None:intergenic |
| TCTTGTCCTTTACGTTTGGA+TGG | 0.470396 | 7.1:-2457963 | None:intergenic |
| GATTTCTTCTACACTTCTCA+AGG | 0.473447 | 7.1:+2454364 | MS.gene066539:CDS |
| AATCTGAATGGAGGAGCTCC+AGG | 0.473846 | 7.1:+2458982 | MS.gene066539:CDS |
| CCCCTATCGATACTTATAGT+TGG | 0.474223 | 7.1:+2459540 | MS.gene066539:CDS |
| GACCTCTGATAAATTGCAAC+TGG | 0.474996 | 7.1:-2456757 | None:intergenic |
| AGGACAAGAGAAGGTTCTAA+AGG | 0.477000 | 7.1:+2457977 | MS.gene066539:CDS |
| AAATGGGATTGGGAAGGAAG+TGG | 0.478749 | 7.1:-2460072 | None:intergenic |
| TCGGTTAAATTCATACCAAA+AGG | 0.481359 | 7.1:+2458244 | MS.gene066539:CDS |
| TGTGGACCAATATTGTGAAA+AGG | 0.484588 | 7.1:+2458010 | MS.gene066539:CDS |
| TCGATACTTATAGTTGGTGT+TGG | 0.485807 | 7.1:+2459546 | MS.gene066539:CDS |
| GACATTGACACAACATATCA+TGG | 0.486664 | 7.1:+2456286 | MS.gene066539:CDS |
| AAACTATGCAATGAGAGAAA+AGG | 0.499911 | 7.1:+2457924 | MS.gene066539:CDS |
| AGATATAAAAGGAGCGAAAG+AGG | 0.501659 | 7.1:+2454291 | MS.gene066539:CDS |
| AGTTGGAGGTGTTAATCAAA+AGG | 0.506205 | 7.1:+2454315 | MS.gene066539:CDS |
| GCAGCAATCATGTACTTATC+GGG | 0.506289 | 7.1:+2457780 | MS.gene066539:CDS |
| GGTAAACAAACAAACCTTAG+TGG | 0.511032 | 7.1:-2456314 | None:intergenic |
| TTTAAGGTTAAGCTCCGGCT+TGG | 0.513237 | 7.1:-2456877 | None:intergenic |
| ATATCATGGCGTTTCCACTA+AGG | 0.515260 | 7.1:+2456300 | MS.gene066539:CDS |
| ATATCAAGAATGGTTGAGAG+TGG | 0.517903 | 7.1:+2457339 | MS.gene066539:CDS |
| ACCAACTATAAGTATCGATA+GGG | 0.518580 | 7.1:-2459541 | None:intergenic |
| TAGAGCTGTTATATGATGAA+AGG | 0.527003 | 7.1:-2459314 | None:intergenic |
| TTTGCATATAGAACAAGCAT+AGG | 0.532715 | 7.1:-2456003 | None:intergenic |
| GTGTAGGCTATGATGGAGGT+TGG | 0.542603 | 7.1:+2458868 | MS.gene066539:intron |
| TCTCACACCTCAGAGCTACC+TGG | 0.544187 | 7.1:-2459000 | None:intergenic |
| AGAGCTGTTATATGATGAAA+GGG | 0.545080 | 7.1:-2459313 | None:intergenic |
| TTTATTGATTACATATCTAG+TGG | 0.548275 | 7.1:+2458044 | MS.gene066539:CDS |
| GTCATGCCATCCAAACGTAA+AGG | 0.551066 | 7.1:+2457957 | MS.gene066539:CDS |
| CAGGTACTGGATGCTGATAA+CGG | 0.552619 | 7.1:+2459687 | MS.gene066539:intron |
| CTATGTATTGCTTATCATAA+CGG | 0.553373 | 7.1:+2459341 | MS.gene066539:CDS |
| GTGCAGCCAAGTTTATAACT+GGG | 0.557398 | 7.1:-2459275 | None:intergenic |
| TTGGTATGAATTTAACCGAC+CGG | 0.559167 | 7.1:-2458240 | None:intergenic |
| AGCCGCTGATTTCACCAGCA+TGG | 0.560772 | 7.1:+2459569 | MS.gene066539:CDS |
| GATAAGCGGTTTCCTGCTTG+GGG | 0.560782 | 7.1:+2458916 | MS.gene066539:CDS |
| ATGGTTGCAATAGATTTCAC+CGG | 0.562610 | 7.1:+2458083 | MS.gene066539:CDS |
| TTTCCTCCAAATCCCCAAGC+AGG | 0.578468 | 7.1:-2458928 | None:intergenic |
| TACTTTGTACTTCTCTCATG+GGG | 0.583824 | 7.1:-2459767 | None:intergenic |
| AAAGGAGCGAAAGAGGCAGT+TGG | 0.584250 | 7.1:+2454298 | MS.gene066539:CDS |
| GGAGCGAAAGAGGCAGTTGG+AGG | 0.585023 | 7.1:+2454301 | MS.gene066539:CDS |
| TACTAATAGAATAGAATGGG+AGG | 0.585283 | 7.1:+2454259 | None:intergenic |
| TGATATGGACATTACATCAA+AGG | 0.585879 | 7.1:+2455842 | MS.gene066539:CDS |
| CACCAACTATAAGTATCGAT+AGG | 0.590609 | 7.1:-2459542 | None:intergenic |
| AAATGGAGATCCTCAAAAGT+CGG | 0.595097 | 7.1:+2458193 | MS.gene066539:CDS |
| AAGGATATAGACCTCCATGC+TGG | 0.598606 | 7.1:-2459583 | None:intergenic |
| AGATCAAGATTTCATTGGAG+AGG | 0.599179 | 7.1:+2456734 | MS.gene066539:CDS |
| GAAGCTTTAAGGTTAAGCTC+CGG | 0.601094 | 7.1:-2456882 | None:intergenic |
| AGTTCTATGATTCTGATAAG+CGG | 0.602034 | 7.1:+2458902 | MS.gene066539:CDS |
| CAAACGTAAAGGACAAGAGA+AGG | 0.609536 | 7.1:+2457968 | MS.gene066539:CDS |
| ACCTCAATTTGTGTGAACAA+TGG | 0.612254 | 7.1:-2454394 | None:intergenic |
| AGATAGTGACCAAACCAAGC+CGG | 0.622761 | 7.1:+2456863 | MS.gene066539:intron |
| GGCCAGTTGCAATTTATCAG+AGG | 0.625547 | 7.1:+2456755 | MS.gene066539:CDS |
| ATAACTGGGCCAAATAAAGT+GGG | 0.634735 | 7.1:-2459261 | None:intergenic |
| TGTGGGAAATGGGATTGGGA+AGG | 0.635038 | 7.1:-2460078 | None:intergenic |
| TGAAGGATAGCTTACACAAG+TGG | 0.638687 | 7.1:-2456135 | None:intergenic |
| TCAAGAATGGTTGAGAGTGG+AGG | 0.644600 | 7.1:+2457342 | MS.gene066539:CDS |
| CGCTGATTTCACCAGCATGG+AGG | 0.669024 | 7.1:+2459572 | MS.gene066539:CDS |
| AACAAACAACAACAATGATG+CGG | 0.669599 | 7.1:+2454339 | MS.gene066539:CDS |
| ACTAATAGAATAGAATGGGA+GGG | 0.674639 | 7.1:+2454260 | None:intergenic |
| CCAACTATAAGTATCGATAG+GGG | 0.681755 | 7.1:-2459540 | None:intergenic |
| TGTTATCCAAGCGAGAACAA+CGG | 0.691289 | 7.1:-2457002 | None:intergenic |
| GGATTTGGAGGAAATGTACA+CGG | 0.693954 | 7.1:+2458937 | MS.gene066539:CDS |
| ATTTGTGTAGGCTATGATGG+AGG | 0.697109 | 7.1:+2458864 | MS.gene066539:intron |
| AGGAGCTCCAGGTAGCTCTG+AGG | 0.713821 | 7.1:+2458993 | MS.gene066539:CDS |
| CTCCATGCTGGTGAAATCAG+CGG | 0.720055 | 7.1:-2459571 | None:intergenic |
| ATTACATTGACGTATCCGGT+CGG | 0.743729 | 7.1:+2458225 | MS.gene066539:CDS |
| TTTGGAGGAAATGTACACGG+TGG | 0.802767 | 7.1:+2458940 | MS.gene066539:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTATTTAAAAAAAAT+TGG | + | chr7.1:2458445-2458464 | MS.gene066539:intron | 0.0% |
| !! | GAATATAGATAAAATTAAAA+AGG | - | chr7.1:2459103-2459122 | None:intergenic | 10.0% |
| !! | GTAAAAATATTTAAAAGATA+AGG | + | chr7.1:2455351-2455370 | MS.gene066539:intron | 10.0% |
| !!! | ATACTAAATGTTTTTTTTTA+CGG | + | chr7.1:2455008-2455027 | MS.gene066539:intron | 10.0% |
| !!! | TTAGTATTGATTTTATTATT+TGG | - | chr7.1:2454995-2455014 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAGAAACTAC+AGG | - | chr7.1:2454512-2454531 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAGAAACTACA+GGG | - | chr7.1:2454511-2454530 | None:intergenic | 15.0% |
| !! | AAAAAGAATACTATTTATGT+AGG | - | chr7.1:2456171-2456190 | None:intergenic | 15.0% |
| !! | AAAACAAAACAAAAAAATAG+TGG | + | chr7.1:2455488-2455507 | MS.gene066539:intron | 15.0% |
| !! | AACAAAAAATTTATACTTAC+AGG | - | chr7.1:2457260-2457279 | None:intergenic | 15.0% |
| !! | AAGTCAAAATATCAATTAAA+TGG | + | chr7.1:2455142-2455161 | MS.gene066539:intron | 15.0% |
| !! | ATAACAATTTAAATCCAAAA+TGG | + | chr7.1:2457397-2457416 | MS.gene066539:CDS | 15.0% |
| !! | TTTACTTAACATATTTAACA+TGG | + | chr7.1:2459912-2459931 | MS.gene066539:intron | 15.0% |
| !! | TTTATAGTCATAAAATTGAT+TGG | - | chr7.1:2457162-2457181 | None:intergenic | 15.0% |
| !!! | AATATACTATTTGTTATTGT+TGG | + | chr7.1:2455738-2455757 | MS.gene066539:intron | 15.0% |
| !!! | ATAGTTTTTTTGTTTTGTTT+AGG | + | chr7.1:2459173-2459192 | MS.gene066539:intron | 15.0% |
| !!! | ATTATTCCTGATATTTTTTT+AGG | + | chr7.1:2458364-2458383 | MS.gene066539:intron | 15.0% |
| !!! | CAAATTTTACAATGTTTATT+AGG | - | chr7.1:2458849-2458868 | None:intergenic | 15.0% |
| !!! | CTTAAATAGTTTTATAATGA+CGG | - | chr7.1:2457546-2457565 | None:intergenic | 15.0% |
| !!! | TATTGAAATTTTTGAAAACT+TGG | - | chr7.1:2457708-2457727 | None:intergenic | 15.0% |
| !! | AAAAAATACTAGTGATTACT+AGG | - | chr7.1:2458550-2458569 | None:intergenic | 20.0% |
| !! | AAAAATACTAGTGATTACTA+GGG | - | chr7.1:2458549-2458568 | None:intergenic | 20.0% |
| !! | AAACATTGTAAAATTTGTGT+AGG | + | chr7.1:2458852-2458871 | MS.gene066539:intron | 20.0% |
| !! | AAATTGTACTATATCTCTAA+GGG | - | chr7.1:2459860-2459879 | None:intergenic | 20.0% |
| !! | AATACTATTTATGTAGGAAT+AGG | - | chr7.1:2456165-2456184 | None:intergenic | 20.0% |
| !! | AATGTCTGTAAAAATAGAAT+TGG | - | chr7.1:2454439-2454458 | None:intergenic | 20.0% |
| !! | ATAGATTCAAAAATCAATTC+TGG | - | chr7.1:2454828-2454847 | None:intergenic | 20.0% |
| !! | ATGTCTGTAAAAATAGAATT+GGG | - | chr7.1:2454438-2454457 | None:intergenic | 20.0% |
| !! | GTCTAATGTTAAATCATATA+TGG | + | chr7.1:2457487-2457506 | MS.gene066539:intron | 20.0% |
| !! | TAAAAAGATGTGTTTAGATA+CGG | + | chr7.1:2454866-2454885 | MS.gene066539:intron | 20.0% |
| !! | TGAAAGACAGAATTATTATA+AGG | - | chr7.1:2456342-2456361 | None:intergenic | 20.0% |
| !! | TGCAATAATGAGAAATATTT+GGG | - | chr7.1:2456817-2456836 | None:intergenic | 20.0% |
| !! | TTCTATATGCAAAAAAAGAT+GGG | + | chr7.1:2456013-2456032 | MS.gene066539:CDS | 20.0% |
| !! | TTGCAATAATGAGAAATATT+TGG | - | chr7.1:2456818-2456837 | None:intergenic | 20.0% |
| !! | TTTAATTACTTTCTCATGTA+AGG | + | chr7.1:2457669-2457688 | MS.gene066539:intron | 20.0% |
| !! | TTTGCAATAAAAACTGTTTA+TGG | + | chr7.1:2456387-2456406 | MS.gene066539:intron | 20.0% |
| !!! | AGTAATTTTTGATCACTTAA+AGG | - | chr7.1:2455182-2455201 | None:intergenic | 20.0% |
| !!! | ATTCAGAAAGTATTTATCTT+TGG | + | chr7.1:2457617-2457636 | MS.gene066539:intron | 20.0% |
| !!! | GTAATTTTTGATCACTTAAA+GGG | - | chr7.1:2455181-2455200 | None:intergenic | 20.0% |
| !!! | TTAATTTTTTCTATCCATTC+TGG | - | chr7.1:2456087-2456106 | None:intergenic | 20.0% |
| !!! | TTTATTGATTACATATCTAG+TGG | + | chr7.1:2458044-2458063 | MS.gene066539:CDS | 20.0% |
| ! | AAAAGAAGTTAAAACGATGT+AGG | - | chr7.1:2458398-2458417 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAAAACGATGTA+GGG | - | chr7.1:2458397-2458416 | None:intergenic | 25.0% |
| ! | AACTTAGTCCTTAAAATTGT+AGG | + | chr7.1:2456441-2456460 | MS.gene066539:intron | 25.0% |
| ! | AATTTCAATAACTTCTATGC+AGG | + | chr7.1:2457718-2457737 | MS.gene066539:intron | 25.0% |
| ! | ACTACTAGATTAACTTTGTA+GGG | - | chr7.1:2456688-2456707 | None:intergenic | 25.0% |
| ! | ACTTAGAACTATAATGATGT+TGG | - | chr7.1:2458595-2458614 | None:intergenic | 25.0% |
| ! | AGACAGAATTATTATAAGGT+TGG | - | chr7.1:2456338-2456357 | None:intergenic | 25.0% |
| ! | AGTATTTATCTTTGGATTGT+CGG | + | chr7.1:2457625-2457644 | MS.gene066539:intron | 25.0% |
| ! | ATATATGTATGTATGTAGCA+GGG | - | chr7.1:2457062-2457081 | None:intergenic | 25.0% |
| ! | ATCTGAAAGAAAGCAAAATA+AGG | - | chr7.1:2456255-2456274 | None:intergenic | 25.0% |
| ! | ATCTGTCAATGTATGTTAAA+CGG | + | chr7.1:2455269-2455288 | MS.gene066539:intron | 25.0% |
| ! | ATGCTAAGGAAATTAAAGAA+AGG | - | chr7.1:2459605-2459624 | None:intergenic | 25.0% |
| ! | ATGTATCTACTAATAGAAAG+TGG | + | chr7.1:2455402-2455421 | MS.gene066539:intron | 25.0% |
| ! | ATTCTTGATATCCTTAGAAA+AGG | - | chr7.1:2457330-2457349 | None:intergenic | 25.0% |
| ! | ATTTCTATGTTGGTATACTA+TGG | + | chr7.1:2456837-2456856 | MS.gene066539:intron | 25.0% |
| ! | CAAATTGTACTATATCTCTA+AGG | - | chr7.1:2459861-2459880 | None:intergenic | 25.0% |
| ! | CATGATCCTAAAAAAATATC+AGG | - | chr7.1:2458373-2458392 | None:intergenic | 25.0% |
| ! | CATTATTGCAATTTCTATGT+TGG | + | chr7.1:2456827-2456846 | MS.gene066539:intron | 25.0% |
| ! | CTATGTATTGCTTATCATAA+CGG | + | chr7.1:2459341-2459360 | MS.gene066539:CDS | 25.0% |
| ! | GTTCTATATGCAAAAAAAGA+TGG | + | chr7.1:2456012-2456031 | MS.gene066539:CDS | 25.0% |
| ! | TAAAATTAAAAAGGGTAACG+CGG | - | chr7.1:2459094-2459113 | None:intergenic | 25.0% |
| ! | TATATATGTATGTATGTAGC+AGG | - | chr7.1:2457063-2457082 | None:intergenic | 25.0% |
| ! | TCTGAAAGAAAGCAAAATAA+GGG | - | chr7.1:2456254-2456273 | None:intergenic | 25.0% |
| ! | TGTCTGTAAAAATAGAATTG+GGG | - | chr7.1:2454437-2454456 | None:intergenic | 25.0% |
| ! | TTTAACAATTCATTGCAGAT+AGG | - | chr7.1:2454586-2454605 | None:intergenic | 25.0% |
| !! | AGTAATTTTGCAATTTCATC+GGG | + | chr7.1:2455071-2455090 | MS.gene066539:intron | 25.0% |
| !! | ATGAATTTGAAACTAGTAGT+TGG | + | chr7.1:2456594-2456613 | MS.gene066539:intron | 25.0% |
| !! | ATTGTTCCTTTTCACAATAT+TGG | - | chr7.1:2458019-2458038 | None:intergenic | 25.0% |
| !! | CAAATATCAATCTTACCTTT+TGG | - | chr7.1:2458262-2458281 | None:intergenic | 25.0% |
| !! | GAGTAATTTTGCAATTTCAT+CGG | + | chr7.1:2455070-2455089 | MS.gene066539:intron | 25.0% |
| !! | TTTCTTTAATTTCCTTAGCA+TGG | + | chr7.1:2459604-2459623 | MS.gene066539:intron | 25.0% |
| !! | TTTTACTGTCAAATTTGAAG+CGG | + | chr7.1:2454688-2454707 | MS.gene066539:intron | 25.0% |
| !!! | AAGTTGATGATTAAGAGATT+AGG | - | chr7.1:2458297-2458316 | None:intergenic | 25.0% |
| !!! | AATGTTTTTTCAGCTTCAAA+TGG | + | chr7.1:2458176-2458195 | MS.gene066539:intron | 25.0% |
| !!! | GAAATCAACTTGTTAGTTAT+CGG | - | chr7.1:2455634-2455653 | None:intergenic | 25.0% |
| !!! | GTCATTTTGTTTTTTCTTGT+AGG | + | chr7.1:2457302-2457321 | MS.gene066539:intron | 25.0% |
| !!! | GTTTTTTTGTTTTGTTTAGG+TGG | + | chr7.1:2459176-2459195 | MS.gene066539:intron | 25.0% |
| !!! | TACAATTTTAAGGACTAAGT+TGG | - | chr7.1:2456442-2456461 | None:intergenic | 25.0% |
| !!! | TGGGTTTTTTCAATTTAACA+TGG | - | chr7.1:2456798-2456817 | None:intergenic | 25.0% |
| !!! | TTTTCTAAGGATATCAAGAA+TGG | + | chr7.1:2457329-2457348 | MS.gene066539:CDS | 25.0% |
| AAAAAAACGGAAATCAGTCA+TGG | - | chr7.1:2455964-2455983 | None:intergenic | 30.0% | |
| AAAATTTGTGTAGGCTATGA+TGG | + | chr7.1:2458861-2458880 | MS.gene066539:intron | 30.0% | |
| AAACTATGCAATGAGAGAAA+AGG | + | chr7.1:2457924-2457943 | MS.gene066539:CDS | 30.0% | |
| AACAAACAACAACAATGATG+CGG | + | chr7.1:2454339-2454358 | MS.gene066539:CDS | 30.0% | |
| AACAAAGACTAGAGAACTTT+AGG | - | chr7.1:2457842-2457861 | None:intergenic | 30.0% | |
| AATCATGTTCGAAGAAATCT+TGG | + | chr7.1:2456919-2456938 | MS.gene066539:CDS | 30.0% | |
| AATTAAATCCATCTCTCCAT+TGG | + | chr7.1:2456528-2456547 | MS.gene066539:intron | 30.0% | |
| ACAAAGACTAGAGAACTTTA+GGG | - | chr7.1:2457841-2457860 | None:intergenic | 30.0% | |
| AGAGCTGTTATATGATGAAA+GGG | - | chr7.1:2459316-2459335 | None:intergenic | 30.0% | |
| AGATGGGAAATTTGAAGAAT+TGG | + | chr7.1:2456029-2456048 | MS.gene066539:CDS | 30.0% | |
| AGTTCTATGATTCTGATAAG+CGG | + | chr7.1:2458902-2458921 | MS.gene066539:CDS | 30.0% | |
| ATAAAACAATTGACACCTAC+CGG | - | chr7.1:2458105-2458124 | None:intergenic | 30.0% | |
| ATAACTTCAGTCTTGCAAAT+AGG | - | chr7.1:2457375-2457394 | None:intergenic | 30.0% | |
| ATGAAAGACAAAAACTGATC+AGG | - | chr7.1:2460033-2460052 | None:intergenic | 30.0% | |
| ATGGATCACAATAACATTAG+AGG | + | chr7.1:2457506-2457525 | MS.gene066539:intron | 30.0% | |
| CTACTAGATTAACTTTGTAG+GGG | - | chr7.1:2456687-2456706 | None:intergenic | 30.0% | |
| GAAATTATTTGAGCTGTGAT+TGG | - | chr7.1:2457576-2457595 | None:intergenic | 30.0% | |
| GACTACTAGATTAACTTTGT+AGG | - | chr7.1:2456689-2456708 | None:intergenic | 30.0% | |
| GATGGGAAATTTGAAGAATT+GGG | + | chr7.1:2456030-2456049 | MS.gene066539:CDS | 30.0% | |
| GGTAAGATTGATATTTGTCA+TGG | + | chr7.1:2458265-2458284 | MS.gene066539:intron | 30.0% | |
| TACTAGATTAACTTTGTAGG+GGG | - | chr7.1:2456686-2456705 | None:intergenic | 30.0% | |
| TACTCTGATAAAAGAGACAT+TGG | - | chr7.1:2458660-2458679 | None:intergenic | 30.0% | |
| TAGAGCTGTTATATGATGAA+AGG | - | chr7.1:2459317-2459336 | None:intergenic | 30.0% | |
| TCAAAACACTCGATAACTAA+TGG | - | chr7.1:2457749-2457768 | None:intergenic | 30.0% | |
| TCGGTTAAATTCATACCAAA+AGG | + | chr7.1:2458244-2458263 | MS.gene066539:CDS | 30.0% | |
| TGATATGGACATTACATCAA+AGG | + | chr7.1:2455842-2455861 | MS.gene066539:CDS | 30.0% | |
| TTACTTTGTACTTCTCTCAT+GGG | - | chr7.1:2459771-2459790 | None:intergenic | 30.0% | |
| TTATACACTGTCGATGTAAA+AGG | + | chr7.1:2457113-2457132 | MS.gene066539:intron | 30.0% | |
| TTTGCATATAGAACAAGCAT+AGG | - | chr7.1:2456006-2456025 | None:intergenic | 30.0% | |
| ! | AATGAATTTTGGATGCTTGT+GGG | - | chr7.1:2460098-2460117 | None:intergenic | 30.0% |
| ! | ACAAGTATTTTGCATCTATC+TGG | + | chr7.1:2458717-2458736 | MS.gene066539:intron | 30.0% |
| ! | TAATGAATTTTGGATGCTTG+TGG | - | chr7.1:2460099-2460118 | None:intergenic | 30.0% |
| ! | TCTCATTGCATAGTTTTTCA+AGG | - | chr7.1:2457920-2457939 | None:intergenic | 30.0% |
| ! | TGATGCTAGACAATTTTACT+TGG | - | chr7.1:2459399-2459418 | None:intergenic | 30.0% |
| ! | TGTAAGAGTATAGATCGATT+TGG | - | chr7.1:2456468-2456487 | None:intergenic | 30.0% |
| ! | TTTTGTTACAATACCATTCC+CGG | + | chr7.1:2459040-2459059 | MS.gene066539:intron | 30.0% |
| !! | ACCAACTATAAGTATCGATA+GGG | - | chr7.1:2459544-2459563 | None:intergenic | 30.0% |
| !! | GATTTGGTCCTACAATTTTA+AGG | - | chr7.1:2456452-2456471 | None:intergenic | 30.0% |
| !! | GTTTTATTCACTGAAGTGAT+TGG | + | chr7.1:2458118-2458137 | MS.gene066539:intron | 30.0% |
| !! | TATTTGTTATTGTTGGAACC+TGG | + | chr7.1:2455745-2455764 | MS.gene066539:intron | 30.0% |
| !!! | AAATTGGTTTTCAGATACTG+AGG | + | chr7.1:2458461-2458480 | MS.gene066539:intron | 30.0% |
| !!! | ACTGCTCTTTGATTTTTTGT+TGG | - | chr7.1:2454669-2454688 | None:intergenic | 30.0% |
| !!! | TCTCACTGTTTTAATCTGAA+TGG | + | chr7.1:2458970-2458989 | MS.gene066539:CDS | 30.0% |
| !!! | TTTTGTTTTGTTTAGGTGGA+AGG | + | chr7.1:2459180-2459199 | MS.gene066539:intron | 30.0% |
| AAATGGAGATCCTCAAAAGT+CGG | + | chr7.1:2458193-2458212 | MS.gene066539:CDS | 35.0% | |
| ACATCTTGGACAATTACTTG+TGG | + | chr7.1:2455768-2455787 | MS.gene066539:intron | 35.0% | |
| ACCTCAATTTGTGTGAACAA+TGG | - | chr7.1:2454397-2454416 | None:intergenic | 35.0% | |
| AGACATGTTGTGTTCAAAGA+TGG | - | chr7.1:2457471-2457490 | None:intergenic | 35.0% | |
| AGATATAAAAGGAGCGAAAG+AGG | + | chr7.1:2454291-2454310 | MS.gene066539:CDS | 35.0% | |
| AGATCAAGATTTCATTGGAG+AGG | + | chr7.1:2456734-2456753 | MS.gene066539:CDS | 35.0% | |
| AGCAGCAATCATGTACTTAT+CGG | + | chr7.1:2457779-2457798 | MS.gene066539:CDS | 35.0% | |
| AGTACCAATAACATGTGCTT+TGG | + | chr7.1:2459653-2459672 | MS.gene066539:intron | 35.0% | |
| ATAACTGGGCCAAATAAAGT+GGG | - | chr7.1:2459264-2459283 | None:intergenic | 35.0% | |
| ATATCAAGAATGGTTGAGAG+TGG | + | chr7.1:2457339-2457358 | MS.gene066539:CDS | 35.0% | |
| ATCCTATGAGAAGAACATCA+TGG | - | chr7.1:2459463-2459482 | None:intergenic | 35.0% | |
| ATGATGTTCTTCTCATAGGA+TGG | + | chr7.1:2459462-2459481 | MS.gene066539:intron | 35.0% | |
| ATGGTTGCAATAGATTTCAC+CGG | + | chr7.1:2458083-2458102 | MS.gene066539:CDS | 35.0% | |
| ATGTAGGAATAGGAAGATGA+AGG | - | chr7.1:2456155-2456174 | None:intergenic | 35.0% | |
| ATTTGGCCCAGTTATAAACT+TGG | + | chr7.1:2459269-2459288 | MS.gene066539:CDS | 35.0% | |
| CAATGATCTCATCTAGTAGT+TGG | + | chr7.1:2456617-2456636 | MS.gene066539:intron | 35.0% | |
| CGAATTGTTTGAATCCAGAA+TGG | + | chr7.1:2456070-2456089 | MS.gene066539:CDS | 35.0% | |
| CTCATAGGATGGAATTGTTA+CGG | + | chr7.1:2459473-2459492 | MS.gene066539:intron | 35.0% | |
| CTGCAAGATCAAGATTTCAT+TGG | + | chr7.1:2456729-2456748 | MS.gene066539:CDS | 35.0% | |
| CTTACTTTGTACTTCTCTCA+TGG | - | chr7.1:2459772-2459791 | None:intergenic | 35.0% | |
| GACATTGACACAACATATCA+TGG | + | chr7.1:2456286-2456305 | MS.gene066539:CDS | 35.0% | |
| GATTTCTTCTACACTTCTCA+AGG | + | chr7.1:2454364-2454383 | MS.gene066539:CDS | 35.0% | |
| GGTAAACAAACAAACCTTAG+TGG | - | chr7.1:2456317-2456336 | None:intergenic | 35.0% | |
| GGTCGTCATCATTTATGAAT+AGG | - | chr7.1:2455875-2455894 | None:intergenic | 35.0% | |
| TACTTTGTACTTCTCTCATG+GGG | - | chr7.1:2459770-2459789 | None:intergenic | 35.0% | |
| TATAAACTTGGCTGCACAAA+TGG | + | chr7.1:2459281-2459300 | MS.gene066539:CDS | 35.0% | |
| TATAACTGGGCCAAATAAAG+TGG | - | chr7.1:2459265-2459284 | None:intergenic | 35.0% | |
| TGCTGGAAATTAAGACAAAC+TGG | - | chr7.1:2457426-2457445 | None:intergenic | 35.0% | |
| TGGATATGGCATGACATAAT+CGG | + | chr7.1:2458491-2458510 | MS.gene066539:intron | 35.0% | |
| TGGATTTGAACTGAACTTCA+TGG | + | chr7.1:2458064-2458083 | MS.gene066539:CDS | 35.0% | |
| TGTCTTAATTTCCAGCAGTT+TGG | + | chr7.1:2457429-2457448 | MS.gene066539:CDS | 35.0% | |
| TGTGGACCAATATTGTGAAA+AGG | + | chr7.1:2458010-2458029 | MS.gene066539:CDS | 35.0% | |
| TGTGTGTGAATCTAATTGCT+AGG | + | chr7.1:2455453-2455472 | MS.gene066539:intron | 35.0% | |
| TTACTTTACTTCCAAACTGC+TGG | - | chr7.1:2457443-2457462 | None:intergenic | 35.0% | |
| TTCTATACGACACAGATACT+TGG | - | chr7.1:2458775-2458794 | None:intergenic | 35.0% | |
| TTCTGAATCGATCATATCGT+TGG | - | chr7.1:2457605-2457624 | None:intergenic | 35.0% | |
| TTGCATTACATTGACGTATC+CGG | + | chr7.1:2458221-2458240 | MS.gene066539:CDS | 35.0% | |
| TTGGTATGAATTTAACCGAC+CGG | - | chr7.1:2458243-2458262 | None:intergenic | 35.0% | |
| ! | GGGTGCTTTTCAGATATAAA+AGG | + | chr7.1:2454280-2454299 | MS.gene066539:CDS | 35.0% |
| ! | TAAATGATGACGACCTGAAT+TGG | + | chr7.1:2455880-2455899 | MS.gene066539:intron | 35.0% |
| ! | TCGATACTTATAGTTGGTGT+TGG | + | chr7.1:2459546-2459565 | MS.gene066539:CDS | 35.0% |
| ! | TCTTGTAGGATCCTTTTCTA+AGG | + | chr7.1:2457316-2457335 | MS.gene066539:intron | 35.0% |
| ! | TGCTTTGGCTCAATTATTTC+AGG | + | chr7.1:2459668-2459687 | MS.gene066539:intron | 35.0% |
| !! | AGACAAACTGGTTTCCATTT+TGG | - | chr7.1:2457414-2457433 | None:intergenic | 35.0% |
| !! | AGCAAGTAACTTGCTTGATA+TGG | + | chr7.1:2455827-2455846 | MS.gene066539:CDS | 35.0% |
| !! | AGTTGGAGGTGTTAATCAAA+AGG | + | chr7.1:2454315-2454334 | MS.gene066539:CDS | 35.0% |
| !! | CACCAACTATAAGTATCGAT+AGG | - | chr7.1:2459545-2459564 | None:intergenic | 35.0% |
| !! | CCAACTATAAGTATCGATAG+GGG | - | chr7.1:2459543-2459562 | None:intergenic | 35.0% |
| !! | TCTGTTGCTTTGAAGCTTTA+AGG | - | chr7.1:2456896-2456915 | None:intergenic | 35.0% |
| !!! | CACTGTTTTAATCTGAATGG+AGG | + | chr7.1:2458973-2458992 | MS.gene066539:CDS | 35.0% |
| !!! | TTAAACCCCGACCTTTTTTT+TGG | - | chr7.1:2455433-2455452 | None:intergenic | 35.0% |
| AACAGTCTCTTCAGCATGAA+TGG | - | chr7.1:2456953-2456972 | None:intergenic | 40.0% | |
| AAGTGGCGAGACCAAAAAAA+AGG | + | chr7.1:2455419-2455438 | MS.gene066539:intron | 40.0% | |
| ACTGAGGTACATCATGGATA+TGG | + | chr7.1:2458477-2458496 | MS.gene066539:intron | 40.0% | |
| AGCATATCATTGCCATGCTA+AGG | - | chr7.1:2459619-2459638 | None:intergenic | 40.0% | |
| AGTAATTGTCCAAGATGTCC+AGG | - | chr7.1:2455766-2455785 | None:intergenic | 40.0% | |
| ATATCATGGCGTTTCCACTA+AGG | + | chr7.1:2456300-2456319 | MS.gene066539:CDS | 40.0% | |
| ATCTCTCCATTGGTATTTGG+AGG | + | chr7.1:2456538-2456557 | MS.gene066539:intron | 40.0% | |
| ATTACATTGACGTATCCGGT+CGG | + | chr7.1:2458225-2458244 | MS.gene066539:CDS | 40.0% | |
| ATTCATGATAGCACGACACA+TGG | - | chr7.1:2454757-2454776 | None:intergenic | 40.0% | |
| ATTTGTGTAGGCTATGATGG+AGG | + | chr7.1:2458864-2458883 | MS.gene066539:intron | 40.0% | |
| CAAACGTAAAGGACAAGAGA+AGG | + | chr7.1:2457968-2457987 | MS.gene066539:CDS | 40.0% | |
| CCCCTATCGATACTTATAGT+TGG | + | chr7.1:2459540-2459559 | MS.gene066539:CDS | 40.0% | |
| CCTCGCTTAAAAAGTTCTAC+TGG | + | chr7.1:2459711-2459730 | MS.gene066539:CDS | 40.0% | |
| CTATCAGGACCCACTTTATT+TGG | + | chr7.1:2459252-2459271 | MS.gene066539:CDS | 40.0% | |
| CTTCTCTTGTCCTTTACGTT+TGG | - | chr7.1:2457970-2457989 | None:intergenic | 40.0% | |
| GACCTCTGATAAATTGCAAC+TGG | - | chr7.1:2456760-2456779 | None:intergenic | 40.0% | |
| GCAGCAATCATGTACTTATC+GGG | + | chr7.1:2457780-2457799 | MS.gene066539:CDS | 40.0% | |
| GCCATTGTTCACACAAATTG+AGG | + | chr7.1:2454393-2454412 | MS.gene066539:CDS | 40.0% | |
| GGATTTGGAGGAAATGTACA+CGG | + | chr7.1:2458937-2458956 | MS.gene066539:CDS | 40.0% | |
| GTCCATGATGTTCTTCTCAT+AGG | + | chr7.1:2459458-2459477 | MS.gene066539:intron | 40.0% | |
| GTGCAGCCAAGTTTATAACT+GGG | - | chr7.1:2459278-2459297 | None:intergenic | 40.0% | |
| GTGTCGTATAGAACTAGTGT+CGG | + | chr7.1:2458782-2458801 | MS.gene066539:intron | 40.0% | |
| GTTTAGGTGGAAGGAATTGA+AGG | + | chr7.1:2459189-2459208 | MS.gene066539:intron | 40.0% | |
| TCAGATACTGAGGTACATCA+TGG | + | chr7.1:2458471-2458490 | MS.gene066539:intron | 40.0% | |
| TCCAAATACCAATGGAGAGA+TGG | - | chr7.1:2456539-2456558 | None:intergenic | 40.0% | |
| TCCATCTCTCCATTGGTATT+TGG | + | chr7.1:2456535-2456554 | MS.gene066539:intron | 40.0% | |
| TCTAAAGGGTCAACTCTTTG+TGG | + | chr7.1:2457992-2458011 | MS.gene066539:CDS | 40.0% | |
| TCTCTCCATTGGTATTTGGA+GGG | + | chr7.1:2456539-2456558 | MS.gene066539:intron | 40.0% | |
| TCTTGTCCTTTACGTTTGGA+TGG | - | chr7.1:2457966-2457985 | None:intergenic | 40.0% | |
| TGAAGGATAGCTTACACAAG+TGG | - | chr7.1:2456138-2456157 | None:intergenic | 40.0% | |
| TGAGCCAAAGCACATGTTAT+TGG | - | chr7.1:2459660-2459679 | None:intergenic | 40.0% | |
| TGATGCACATCTATACAACC+TGG | + | chr7.1:2456643-2456662 | MS.gene066539:intron | 40.0% | |
| TGTACACCTTTAGTGATGCT+TGG | + | chr7.1:2454791-2454810 | MS.gene066539:intron | 40.0% | |
| TGTGCAGCCAAGTTTATAAC+TGG | - | chr7.1:2459279-2459298 | None:intergenic | 40.0% | |
| TGTTATCCAAGCGAGAACAA+CGG | - | chr7.1:2457005-2457024 | None:intergenic | 40.0% | |
| TTACGTAGTGTGACTCTATC+AGG | + | chr7.1:2459237-2459256 | MS.gene066539:CDS | 40.0% | |
| TTGCAATAGATTTCACCGGT+AGG | + | chr7.1:2458087-2458106 | MS.gene066539:intron | 40.0% | |
| TTTGGATGCTTGTGGGAAAT+GGG | - | chr7.1:2460091-2460110 | None:intergenic | 40.0% | |
| ! | AGGACAAGAGAAGGTTCTAA+AGG | + | chr7.1:2457977-2457996 | MS.gene066539:CDS | 40.0% |
| ! | CGGAAATCAGTCATGGTTTT+AGG | - | chr7.1:2455957-2455976 | None:intergenic | 40.0% |
| ! | GGAAGGAATTGAAGGCATAA+TGG | + | chr7.1:2459197-2459216 | MS.gene066539:CDS | 40.0% |
| ! | GGCTCAATTATTTCAGGTAC+TGG | + | chr7.1:2459674-2459693 | MS.gene066539:intron | 40.0% |
| ! | TGCAAAGAATCCGACTTTTG+AGG | - | chr7.1:2458206-2458225 | None:intergenic | 40.0% |
| ! | TTTTGGATGCTTGTGGGAAA+TGG | - | chr7.1:2460092-2460111 | None:intergenic | 40.0% |
| !! | ATTCTTGTGTTTTTGCCAGG+AGG | + | chr7.1:2459970-2459989 | MS.gene066539:intron | 40.0% |
| !! | CCAGTAGAACTTTTTAAGCG+AGG | - | chr7.1:2459714-2459733 | None:intergenic | 40.0% |
| !! | CTCATTCTTGTGTTTTTGCC+AGG | + | chr7.1:2459967-2459986 | MS.gene066539:intron | 40.0% |
| !! | GAAGCTTTAAGGTTAAGCTC+CGG | - | chr7.1:2456885-2456904 | None:intergenic | 40.0% |
| !! | GGACAAGAGAAGGTTCTAAA+GGG | + | chr7.1:2457978-2457997 | MS.gene066539:CDS | 40.0% |
| AAAACGTTGCCAGCCAATTC+AGG | - | chr7.1:2455896-2455915 | None:intergenic | 45.0% | |
| AAATGGGATTGGGAAGGAAG+TGG | - | chr7.1:2460075-2460094 | None:intergenic | 45.0% | |
| AAGGATATAGACCTCCATGC+TGG | - | chr7.1:2459586-2459605 | None:intergenic | 45.0% | |
| ACATGGACAACATATCCTCG+AGG | - | chr7.1:2454740-2454759 | None:intergenic | 45.0% | |
| ACGACACAGATACTTGGATG+CGG | - | chr7.1:2458769-2458788 | None:intergenic | 45.0% | |
| AGATAGTGACCAAACCAAGC+CGG | + | chr7.1:2456863-2456882 | MS.gene066539:intron | 45.0% | |
| ATGCTTGTGGGAAATGGGAT+TGG | - | chr7.1:2460086-2460105 | None:intergenic | 45.0% | |
| CGAGACCAAAAAAAAGGTCG+GGG | + | chr7.1:2455425-2455444 | MS.gene066539:intron | 45.0% | |
| CTAGTCCCTCCAAATACCAA+TGG | - | chr7.1:2456547-2456566 | None:intergenic | 45.0% | |
| GCAGAACCAAGCATCACTAA+AGG | - | chr7.1:2454800-2454819 | None:intergenic | 45.0% | |
| GCGAGACCAAAAAAAAGGTC+GGG | + | chr7.1:2455424-2455443 | MS.gene066539:intron | 45.0% | |
| GGCCAGTTGCAATTTATCAG+AGG | + | chr7.1:2456755-2456774 | MS.gene066539:CDS | 45.0% | |
| GGCGAGACCAAAAAAAAGGT+CGG | + | chr7.1:2455423-2455442 | MS.gene066539:intron | 45.0% | |
| GTCATGCCATCCAAACGTAA+AGG | + | chr7.1:2457957-2457976 | MS.gene066539:CDS | 45.0% | |
| TATCTTCCGTTGTTCTCGCT+TGG | + | chr7.1:2456996-2457015 | MS.gene066539:CDS | 45.0% | |
| TCAAGAATGGTTGAGAGTGG+AGG | + | chr7.1:2457342-2457361 | MS.gene066539:CDS | 45.0% | |
| TGATAAGCGGTTTCCTGCTT+GGG | + | chr7.1:2458915-2458934 | MS.gene066539:CDS | 45.0% | |
| TGCTTGTGGGAAATGGGATT+GGG | - | chr7.1:2460085-2460104 | None:intergenic | 45.0% | |
| TTGTAGGGGGAGATTTGACT+TGG | - | chr7.1:2456673-2456692 | None:intergenic | 45.0% | |
| TTGTTGGAACCTGGACATCT+TGG | + | chr7.1:2455754-2455773 | MS.gene066539:intron | 45.0% | |
| TTTGGAGGAAATGTACACGG+TGG | + | chr7.1:2458940-2458959 | MS.gene066539:CDS | 45.0% | |
| ! | CTGAAGAGACTGTTGCTTCA+AGG | + | chr7.1:2456959-2456978 | MS.gene066539:CDS | 45.0% |
| ! | TGAAGCGGATTCGAGTAGTT+TGG | + | chr7.1:2454703-2454722 | MS.gene066539:intron | 45.0% |
| ! | TTTAAGGTTAAGCTCCGGCT+TGG | - | chr7.1:2456880-2456899 | None:intergenic | 45.0% |
| !! | AGTGATGCTTGGTTCTGCTT+TGG | + | chr7.1:2454802-2454821 | MS.gene066539:intron | 45.0% |
| !! | CAGGTACTGGATGCTGATAA+CGG | + | chr7.1:2459687-2459706 | MS.gene066539:intron | 45.0% |
| !! | AATATAGATAAAATTAAAAA+GGG | - | chr7.1:2459102-2459121 | None:intergenic | 5.0% |
| !! | CTAAAATTATAAAAAAAAAA+CGG | - | chr7.1:2455977-2455996 | None:intergenic | 5.0% |
| !!! | AATATACTATTTTTTTTTTA+AGG | + | chr7.1:2455680-2455699 | MS.gene066539:intron | 5.0% |
| !!! | ATAATTATTTGATATTTTTT+TGG | - | chr7.1:2455327-2455346 | None:intergenic | 5.0% |
| AAAGGAGCGAAAGAGGCAGT+TGG | + | chr7.1:2454298-2454317 | MS.gene066539:CDS | 50.0% | |
| AATCTGAATGGAGGAGCTCC+AGG | + | chr7.1:2458982-2459001 | MS.gene066539:CDS | 50.0% | |
| ACAACAGAGATCTGTCCTCC+TGG | - | chr7.1:2459988-2460007 | None:intergenic | 50.0% | |
| CTCCATGCTGGTGAAATCAG+CGG | - | chr7.1:2459574-2459593 | None:intergenic | 50.0% | |
| CTCTGTTGTGCAAGCTCTTC+TGG | + | chr7.1:2459999-2460018 | MS.gene066539:CDS | 50.0% | |
| CTGATAAGCGGTTTCCTGCT+TGG | + | chr7.1:2458914-2458933 | MS.gene066539:CDS | 50.0% | |
| GATAAGCGGTTTCCTGCTTG+GGG | + | chr7.1:2458916-2458935 | MS.gene066539:CDS | 50.0% | |
| TGTGGGAAATGGGATTGGGA+AGG | - | chr7.1:2460081-2460100 | None:intergenic | 50.0% | |
| TTTCCTCCAAATCCCCAAGC+AGG | - | chr7.1:2458931-2458950 | None:intergenic | 50.0% | |
| TTTCCTGCTTGGGGATTTGG+AGG | + | chr7.1:2458925-2458944 | MS.gene066539:CDS | 50.0% | |
| ! | GTGTAGGCTATGATGGAGGT+TGG | + | chr7.1:2458868-2458887 | MS.gene066539:intron | 50.0% |
| ! | TGATGACGACCTGAATTGGC+TGG | + | chr7.1:2455884-2455903 | MS.gene066539:intron | 50.0% |
| !! | AGTGTCGGCATTGCGTATCT+GGG | + | chr7.1:2458797-2458816 | MS.gene066539:intron | 50.0% |
| !! | GAGATTTGACTTGGCAGTCC+AGG | - | chr7.1:2456664-2456683 | None:intergenic | 50.0% |
| !! | TAGTGTCGGCATTGCGTATC+TGG | + | chr7.1:2458796-2458815 | MS.gene066539:intron | 50.0% |
| ATTCCCGGACTCTGCGTATG+CGG | + | chr7.1:2459055-2459074 | MS.gene066539:intron | 55.0% | |
| CGGTTTCCTGCTTGGGGATT+TGG | + | chr7.1:2458922-2458941 | MS.gene066539:CDS | 55.0% | |
| TCTCACACCTCAGAGCTACC+TGG | - | chr7.1:2459003-2459022 | None:intergenic | 55.0% | |
| TTGGAATGTTGCGAGCCTCG+AGG | + | chr7.1:2454722-2454741 | MS.gene066539:intron | 55.0% | |
| !! | AGCCGCTGATTTCACCAGCA+TGG | + | chr7.1:2459569-2459588 | MS.gene066539:CDS | 55.0% |
| !! | CGCTGATTTCACCAGCATGG+AGG | + | chr7.1:2459572-2459591 | MS.gene066539:CDS | 55.0% |
| !! | GGTTAAGCTCCGGCTTGGTT+TGG | - | chr7.1:2456875-2456894 | None:intergenic | 55.0% |
| GCATACGCAGAGTCCGGGAA+TGG | - | chr7.1:2459056-2459075 | None:intergenic | 60.0% | |
| GGAGCGAAAGAGGCAGTTGG+AGG | + | chr7.1:2454301-2454320 | MS.gene066539:CDS | 60.0% | |
| TTCCCGGACTCTGCGTATGC+GGG | + | chr7.1:2459056-2459075 | MS.gene066539:intron | 60.0% | |
| ! | AGGAGCTCCAGGTAGCTCTG+AGG | + | chr7.1:2458993-2459012 | MS.gene066539:CDS | 60.0% |
| CTCCCGCATACGCAGAGTCC+GGG | - | chr7.1:2459061-2459080 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAGAGTC+CGG | - | chr7.1:2459062-2459081 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2454274 | 2460119 | 2454274 | ID=MS.gene066539 |
| chr7.1 | mRNA | 2454274 | 2460119 | 2454274 | ID=MS.gene066539.t1;Parent=MS.gene066539 |
| chr7.1 | exon | 2454274 | 2454414 | 2454274 | ID=MS.gene066539.t1.exon1;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2454274 | 2454414 | 2454274 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2455816 | 2455863 | 2455816 | ID=MS.gene066539.t1.exon2;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2455816 | 2455863 | 2455816 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2455997 | 2456142 | 2455997 | ID=MS.gene066539.t1.exon3;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2455997 | 2456142 | 2455997 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2456273 | 2456321 | 2456273 | ID=MS.gene066539.t1.exon4;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2456273 | 2456321 | 2456273 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2456720 | 2456776 | 2456720 | ID=MS.gene066539.t1.exon5;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2456720 | 2456776 | 2456720 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2456865 | 2457044 | 2456865 | ID=MS.gene066539.t1.exon6;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2456865 | 2457044 | 2456865 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2457324 | 2457458 | 2457324 | ID=MS.gene066539.t1.exon7;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2457324 | 2457458 | 2457324 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2457740 | 2457801 | 2457740 | ID=MS.gene066539.t1.exon8;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2457740 | 2457801 | 2457740 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2457893 | 2458104 | 2457893 | ID=MS.gene066539.t1.exon9;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2457893 | 2458104 | 2457893 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2458189 | 2458265 | 2458189 | ID=MS.gene066539.t1.exon10;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2458189 | 2458265 | 2458189 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2458874 | 2459014 | 2458874 | ID=MS.gene066539.t1.exon11;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2458874 | 2459014 | 2458874 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2459195 | 2459362 | 2459195 | ID=MS.gene066539.t1.exon12;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2459195 | 2459362 | 2459195 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2459480 | 2459593 | 2459480 | ID=MS.gene066539.t1.exon13;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2459480 | 2459593 | 2459480 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2459690 | 2459786 | 2459690 | ID=MS.gene066539.t1.exon14;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2459690 | 2459786 | 2459690 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| chr7.1 | exon | 2459989 | 2460119 | 2459989 | ID=MS.gene066539.t1.exon15;Parent=MS.gene066539.t1 |
| chr7.1 | CDS | 2459989 | 2460119 | 2459989 | ID=cds.MS.gene066539.t1;Parent=MS.gene066539.t1 |
| Gene Sequence |
| Protein sequence |
