Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066540.t1 | XP_003626350.1 | 96.8 | 585 | 19 | 0 | 1 | 585 | 1 | 585 | 0.00E+00 | 1119.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066540.t1 | Q5XQC7 | 67.6 | 580 | 181 | 4 | 1 | 574 | 1 | 579 | 1.8e-224 | 780.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066540.t1 | A2Q3G1 | 96.8 | 585 | 19 | 0 | 1 | 585 | 1 | 585 | 0.0e+00 | 1119.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene70112 | MS.gene066540 | PPI |
MS.gene49772 | MS.gene066540 | PPI |
MS.gene000424 | MS.gene066540 | PPI |
MS.gene030511 | MS.gene066540 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066540.t1 | MTR_7g114130 | 96.752 | 585 | 19 | 0 | 1 | 585 | 1 | 585 | 0.0 | 1166 |
MS.gene066540.t1 | MTR_1g048160 | 87.329 | 584 | 70 | 1 | 1 | 584 | 1 | 580 | 0.0 | 1054 |
MS.gene066540.t1 | MTR_8g096190 | 60.727 | 578 | 221 | 4 | 1 | 573 | 1 | 577 | 0.0 | 718 |
MS.gene066540.t1 | MTR_8g096190 | 60.000 | 550 | 214 | 4 | 1 | 545 | 1 | 549 | 0.0 | 673 |
MS.gene066540.t1 | MTR_8g096190 | 58.925 | 521 | 208 | 4 | 1 | 516 | 1 | 520 | 0.0 | 626 |
MS.gene066540.t1 | MTR_7g114100 | 72.893 | 439 | 82 | 5 | 149 | 584 | 13 | 417 | 0.0 | 615 |
MS.gene066540.t1 | MTR_7g033100 | 32.800 | 250 | 121 | 9 | 338 | 562 | 107 | 334 | 1.80e-24 | 107 |
MS.gene066540.t1 | MTR_7g033100 | 32.800 | 250 | 121 | 9 | 338 | 562 | 107 | 334 | 2.28e-24 | 105 |
MS.gene066540.t1 | MTR_3g086520 | 32.669 | 251 | 120 | 11 | 338 | 562 | 125 | 352 | 8.54e-22 | 99.0 |
MS.gene066540.t1 | MTR_3g086520 | 32.669 | 251 | 120 | 11 | 338 | 562 | 122 | 349 | 8.75e-22 | 99.0 |
MS.gene066540.t1 | MTR_3g086520 | 32.669 | 251 | 120 | 11 | 338 | 562 | 125 | 352 | 9.10e-22 | 99.0 |
MS.gene066540.t1 | MTR_3g075530 | 29.682 | 283 | 146 | 11 | 331 | 582 | 87 | 347 | 2.58e-21 | 97.4 |
MS.gene066540.t1 | MTR_8g089670 | 31.200 | 250 | 125 | 9 | 338 | 562 | 132 | 359 | 6.07e-21 | 96.7 |
MS.gene066540.t1 | MTR_6g092020 | 29.010 | 293 | 162 | 11 | 302 | 571 | 38 | 307 | 3.50e-20 | 93.6 |
MS.gene066540.t1 | MTR_2g063843 | 28.526 | 312 | 167 | 12 | 302 | 580 | 51 | 339 | 7.23e-20 | 92.4 |
MS.gene066540.t1 | MTR_3g096520 | 31.111 | 270 | 135 | 11 | 323 | 562 | 87 | 335 | 8.44e-20 | 92.8 |
MS.gene066540.t1 | MTR_6g021730 | 29.435 | 248 | 132 | 7 | 338 | 562 | 127 | 354 | 8.56e-20 | 93.2 |
MS.gene066540.t1 | MTR_3g096520 | 31.111 | 270 | 135 | 11 | 323 | 562 | 87 | 335 | 9.23e-20 | 92.4 |
MS.gene066540.t1 | MTR_3g096520 | 31.111 | 270 | 135 | 11 | 323 | 562 | 104 | 352 | 1.02e-19 | 92.8 |
MS.gene066540.t1 | MTR_8g447220 | 30.870 | 230 | 119 | 9 | 338 | 549 | 80 | 287 | 2.72e-19 | 89.4 |
MS.gene066540.t1 | MTR_2g063907 | 29.730 | 259 | 135 | 9 | 338 | 571 | 81 | 317 | 2.99e-19 | 90.9 |
MS.gene066540.t1 | MTR_8g447220 | 30.870 | 230 | 119 | 9 | 338 | 549 | 80 | 287 | 4.28e-19 | 90.1 |
MS.gene066540.t1 | MTR_2g063857 | 28.920 | 287 | 155 | 11 | 302 | 562 | 59 | 322 | 5.78e-19 | 90.1 |
MS.gene066540.t1 | MTR_6g092100 | 30.645 | 248 | 127 | 9 | 338 | 562 | 29 | 254 | 6.27e-19 | 88.2 |
MS.gene066540.t1 | MTR_2g063857 | 28.920 | 287 | 155 | 11 | 302 | 562 | 59 | 322 | 6.32e-19 | 89.4 |
MS.gene066540.t1 | MTR_7g081170 | 27.564 | 156 | 94 | 4 | 367 | 512 | 85 | 231 | 6.47e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066540.t1 | AT1G08860 | 67.586 | 580 | 181 | 4 | 1 | 574 | 1 | 579 | 0.0 | 812 |
MS.gene066540.t1 | AT5G61910 | 60.381 | 578 | 223 | 4 | 1 | 574 | 769 | 1344 | 0.0 | 714 |
MS.gene066540.t1 | AT5G61900 | 60.585 | 581 | 217 | 5 | 1 | 574 | 1 | 576 | 0.0 | 711 |
MS.gene066540.t1 | AT5G61900 | 60.585 | 581 | 217 | 5 | 1 | 574 | 1 | 576 | 0.0 | 711 |
MS.gene066540.t1 | AT5G07300 | 58.232 | 577 | 234 | 4 | 1 | 571 | 1 | 576 | 0.0 | 686 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 93 | 320 | 3.27e-22 | 100 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 93 | 320 | 3.27e-22 | 100 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 93 | 320 | 3.27e-22 | 100 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 93 | 320 | 3.27e-22 | 100 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 113 | 340 | 4.29e-22 | 99.8 |
MS.gene066540.t1 | AT1G67800 | 32.000 | 250 | 123 | 9 | 338 | 562 | 113 | 340 | 4.66e-22 | 99.4 |
MS.gene066540.t1 | AT3G01650 | 31.600 | 250 | 124 | 9 | 338 | 562 | 156 | 383 | 3.08e-21 | 97.8 |
MS.gene066540.t1 | AT3G01650 | 31.600 | 250 | 124 | 9 | 338 | 562 | 156 | 383 | 3.08e-21 | 97.8 |
MS.gene066540.t1 | AT5G14420 | 29.964 | 277 | 141 | 11 | 338 | 584 | 122 | 375 | 4.89e-21 | 96.7 |
MS.gene066540.t1 | AT5G14420 | 29.964 | 277 | 141 | 11 | 338 | 584 | 122 | 375 | 4.89e-21 | 96.7 |
MS.gene066540.t1 | AT5G14420 | 29.964 | 277 | 141 | 11 | 338 | 584 | 122 | 375 | 4.89e-21 | 96.7 |
MS.gene066540.t1 | AT5G14420 | 29.964 | 277 | 141 | 11 | 338 | 584 | 122 | 375 | 4.89e-21 | 96.7 |
MS.gene066540.t1 | AT5G63970 | 30.201 | 298 | 152 | 13 | 323 | 585 | 16 | 292 | 4.56e-20 | 92.8 |
MS.gene066540.t1 | AT5G63970 | 30.201 | 298 | 152 | 13 | 323 | 585 | 16 | 292 | 4.56e-20 | 92.8 |
MS.gene066540.t1 | AT1G79380 | 29.851 | 268 | 141 | 10 | 323 | 562 | 58 | 306 | 1.95e-18 | 88.2 |
Find 133 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTTTAACCACAGCATTTA+TGG | 0.114808 | 7.1:-2449616 | None:intergenic |
CTCTGTTGTGCAAGCTCTTT+TGG | 0.131277 | 7.1:+2450065 | MS.gene066540:CDS |
CTATCAGGACCCACTTTATT+TGG | 0.165159 | 7.1:+2449218 | MS.gene066540:CDS |
AGACAAAGTGGTCTCCATTT+TGG | 0.193575 | 7.1:-2447777 | None:intergenic |
CGGTTTCCTGCTTGGGGATT+TGG | 0.252676 | 7.1:+2448795 | MS.gene066540:CDS |
ACAATTTATGTAGGCTATAA+TGG | 0.278642 | 7.1:+2448734 | MS.gene066540:intron |
TGATAAGCGGTTTCCTGCTT+GGG | 0.290897 | 7.1:+2448788 | MS.gene066540:CDS |
AACACCTCCCACGGCTTGTT+TGG | 0.316984 | 7.1:-2444667 | None:intergenic |
GATGGAAGATTGGAAGAATT+AGG | 0.317782 | 7.1:+2445969 | MS.gene066540:CDS |
CTACGCAGTGTCAGTCTATC+AGG | 0.324341 | 7.1:+2449203 | MS.gene066540:CDS |
CCCTTATCGATTCTTATAGT+TGG | 0.331752 | 7.1:+2449648 | MS.gene066540:CDS |
AGTGGAAATCATGTACTTAT+AGG | 0.336473 | 7.1:+2447959 | MS.gene066540:CDS |
TGGATTTGAACTAAACTTCA+TGG | 0.343407 | 7.1:+2448355 | MS.gene066540:CDS |
TTAACTTCAGTCTTGCAAAT+AGG | 0.346108 | 7.1:-2447738 | None:intergenic |
TTCTTATGTGTTTAGGTTGT+AGG | 0.350059 | 7.1:+2449146 | MS.gene066540:intron |
ACAACAATTTAAATCCAAAA+TGG | 0.352815 | 7.1:+2447763 | MS.gene066540:CDS |
AGCTTGTAACTTACTTGATC+TGG | 0.356101 | 7.1:+2445746 | MS.gene066540:CDS |
CATTCTGGATTCAAAGAATT+CGG | 0.362170 | 7.1:-2446008 | None:intergenic |
GGCGTCATTGTTGTTGTTAG+TGG | 0.374208 | 7.1:-2444706 | None:intergenic |
CTGATAAGCGGTTTCCTGCT+TGG | 0.381905 | 7.1:+2448787 | MS.gene066540:CDS |
TGTGCAGCCAAGTTTATAAC+CGG | 0.385136 | 7.1:-2449242 | None:intergenic |
TGTCTTAATTTCCAGCAGTT+TGG | 0.391943 | 7.1:+2447795 | MS.gene066540:CDS |
AATTTGCGCCTTTCCTCTCT+TGG | 0.395534 | 7.1:-2448133 | None:intergenic |
TGTAGGAGTTGAAGGCATAA+TGG | 0.403444 | 7.1:+2449163 | MS.gene066540:CDS |
TCTGAAGGGTCAACTCTTTG+TGG | 0.407921 | 7.1:+2448283 | MS.gene066540:CDS |
GTGGAAATCATGTACTTATA+GGG | 0.414517 | 7.1:+2447960 | MS.gene066540:CDS |
TATAAACTTGGCTGCACAAA+TGG | 0.417563 | 7.1:+2449247 | MS.gene066540:CDS |
TGTAATATCTATAGAATAGT+TGG | 0.417805 | 7.1:-2450165 | None:intergenic |
GTTTAGGTTGTAGGAGTTGA+AGG | 0.425836 | 7.1:+2449155 | MS.gene066540:intron |
TATAGAATAGTTGGTGGATG+AGG | 0.428568 | 7.1:-2450156 | None:intergenic |
TAGTTGGTGGATGAGGGAAC+TGG | 0.429633 | 7.1:-2450149 | None:intergenic |
TTTATTTCAGAGTGATCCTA+TGG | 0.433556 | 7.1:+2445923 | MS.gene066540:intron |
ACCAACTATAAGAATCGATA+AGG | 0.436043 | 7.1:-2449649 | None:intergenic |
TTACTTTACTTCCAAACTGC+TGG | 0.443289 | 7.1:-2447806 | None:intergenic |
CTGAGTGATCAAGATTTCCT+TGG | 0.445146 | 7.1:+2446571 | MS.gene066540:CDS |
CTTACTTTGTACTTCTCTCA+TGG | 0.447638 | 7.1:-2449885 | None:intergenic |
ATTTGGCCCGGTTATAAACT+TGG | 0.447982 | 7.1:+2449235 | MS.gene066540:CDS |
ATTCTTGATATCCTTAGAAA+AGG | 0.450005 | 7.1:-2447693 | None:intergenic |
CAGGTACTGGATGCTGATAA+TGG | 0.450055 | 7.1:+2449803 | MS.gene066540:intron |
TATAACCGGGCCAAATAAAG+TGG | 0.451120 | 7.1:-2449228 | None:intergenic |
GTGGTTGCACCATCTCAAAA+TGG | 0.451300 | 7.1:-2446055 | None:intergenic |
GGAGGTGTTAATGCTCAAAC+TGG | 0.457816 | 7.1:+2444681 | MS.gene066540:CDS |
ATGGTTGCGGTAGATTTCAC+TGG | 0.457978 | 7.1:+2448374 | MS.gene066540:CDS |
TGTGGATCAATATTGTGAAA+AGG | 0.461879 | 7.1:+2448301 | MS.gene066540:CDS |
TCGGTTAAATTCATATCAAA+AGG | 0.463052 | 7.1:+2448538 | MS.gene066540:CDS |
GGTTAAGCTCCGGCTCGGTT+TGG | 0.463944 | 7.1:-2447438 | None:intergenic |
TTTCCTGCTTGGGGATTTGG+AGG | 0.464729 | 7.1:+2448798 | MS.gene066540:CDS |
TACAGCTTCAAAACAAAAGA+TGG | 0.467378 | 7.1:+2447462 | MS.gene066540:CDS |
CGAATTCTTTGAATCCAGAA+TGG | 0.475874 | 7.1:+2446009 | MS.gene066540:CDS |
TCGATGTGATGCAAAGAATC+TGG | 0.477438 | 7.1:-2448506 | None:intergenic |
TTCTTCATTATAGGTTCTGA+AGG | 0.478669 | 7.1:+2448268 | MS.gene066540:intron |
AACCGTCTCCTCAGCATGAA+TGG | 0.478948 | 7.1:-2447516 | None:intergenic |
TATCTTCCGTTGTTCTCACT+TGG | 0.482086 | 7.1:+2447562 | MS.gene066540:CDS |
TTGCATCACATCGATTTATC+CGG | 0.482275 | 7.1:+2448515 | MS.gene066540:CDS |
GATTTCTTCTACACCGCTCA+AGG | 0.483038 | 7.1:+2444732 | MS.gene066540:CDS |
GAAGGCATAATGGATGCTTA+TGG | 0.483986 | 7.1:+2449173 | MS.gene066540:CDS |
AAAGAAAGGAGATGGAAGAT+TGG | 0.484283 | 7.1:+2445959 | MS.gene066540:CDS |
AGTTGGTGGATGAGGGAACT+GGG | 0.488481 | 7.1:-2450148 | None:intergenic |
CCCGTAGGATGGAGTTGTTA+CGG | 0.491810 | 7.1:+2449581 | MS.gene066540:intron |
GCTTATCAGAATCATAGAAC+TGG | 0.491928 | 7.1:-2448773 | None:intergenic |
GATTCCCTTTCATCATATAA+CGG | 0.500621 | 7.1:+2449275 | MS.gene066540:CDS |
GATATGTGTCCAGCTTCAAA+TGG | 0.502418 | 7.1:+2448470 | MS.gene066540:intron |
TGATCTGGACATTGCATCAA+AGG | 0.506204 | 7.1:+2445761 | MS.gene066540:CDS |
TCGATTCTTATAGTTGGTGT+TGG | 0.511769 | 7.1:+2449654 | MS.gene066540:CDS |
TCAGAGTGATCCTATGGTTG+TGG | 0.512129 | 7.1:+2445929 | MS.gene066540:intron |
TACCATTCATGCTGAGGAGA+CGG | 0.520082 | 7.1:+2447514 | MS.gene066540:CDS |
TGAACTAAACTTCATGGTTG+CGG | 0.521826 | 7.1:+2448361 | MS.gene066540:CDS |
ATGTAGGCTATAATGGAGGT+TGG | 0.527385 | 7.1:+2448741 | MS.gene066540:intron |
ACAATGAGATACGATACCTC+TGG | 0.527785 | 7.1:-2448829 | None:intergenic |
CGTCGCTTAGAAAGTTCTAC+TGG | 0.531034 | 7.1:+2449827 | MS.gene066540:CDS |
TTTGCATATACCACAACCAT+AGG | 0.533188 | 7.1:-2445939 | None:intergenic |
TCATAACACTCAATAAGTAA+TGG | 0.534645 | 7.1:-2447926 | None:intergenic |
AGGACCCACTTTATTTGGCC+CGG | 0.535361 | 7.1:+2449223 | MS.gene066540:CDS |
TAGAGCCGTTATATGATGAA+AGG | 0.538579 | 7.1:-2449280 | None:intergenic |
CCAACTATAAGAATCGATAA+GGG | 0.543759 | 7.1:-2449648 | None:intergenic |
AGAGCCGTTATATGATGAAA+GGG | 0.545767 | 7.1:-2449279 | None:intergenic |
GTTGTGGTATATGCAAAGAA+AGG | 0.545822 | 7.1:+2445945 | MS.gene066540:CDS |
CTATGTATTGCTTATCATAA+CGG | 0.550933 | 7.1:+2449307 | MS.gene066540:CDS |
TTTATTGACTACGTATCTAG+TGG | 0.553134 | 7.1:+2448335 | MS.gene066540:CDS |
CAAAACAAAAGATGGAATAG+TGG | 0.553776 | 7.1:+2447470 | MS.gene066540:CDS |
AAGCGCTGATTTCAAGAGCA+TGG | 0.554254 | 7.1:+2449677 | MS.gene066540:CDS |
GGTTAGTTTACAAACCTTGG+TGG | 0.557070 | 7.1:-2446276 | None:intergenic |
TTGATATGAATTTAACCGAC+CGG | 0.558756 | 7.1:-2448534 | None:intergenic |
GATAAGCGGTTTCCTGCTTG+GGG | 0.560782 | 7.1:+2448789 | MS.gene066540:CDS |
GTATATGCAAAGAAAGGAGA+TGG | 0.563961 | 7.1:+2445951 | MS.gene066540:CDS |
GAAAGGAGCCAAACAAGCCG+TGG | 0.564110 | 7.1:+2444659 | MS.gene066540:CDS |
GTTAGTTTACAAACCTTGGT+GGG | 0.566287 | 7.1:-2446275 | None:intergenic |
CTTCTCTTGTCCATTGCGTG+TGG | 0.570207 | 7.1:-2448168 | None:intergenic |
GAAGCTGTACGGTTAAGCTC+CGG | 0.570952 | 7.1:-2447448 | None:intergenic |
TTGAGCATTAACACCTCCCA+CGG | 0.571267 | 7.1:-2444676 | None:intergenic |
TGTTATGATTTCAATAGCAG+TGG | 0.572365 | 7.1:+2447941 | MS.gene066540:CDS |
TTTCCTCCAAATCCCCAAGC+AGG | 0.575985 | 7.1:-2448801 | None:intergenic |
TGTACGGTTAAGCTCCGGCT+CGG | 0.576083 | 7.1:-2447443 | None:intergenic |
TGCAAAGAATCTGGCTGTTG+AGG | 0.576136 | 7.1:-2448497 | None:intergenic |
AATATCTATAGAATAGTTGG+TGG | 0.579507 | 7.1:-2450162 | None:intergenic |
GTGCAGCCAAGTTTATAACC+GGG | 0.579751 | 7.1:-2449241 | None:intergenic |
TCAAGAATTGTTGAGAGTGG+TGG | 0.579991 | 7.1:+2447708 | MS.gene066540:CDS |
CAATGAGATACGATACCTCT+GGG | 0.581245 | 7.1:-2448828 | None:intergenic |
TGCTGGAAATTAAGACAAAG+TGG | 0.581538 | 7.1:-2447789 | None:intergenic |
AAGTGCAGCTCGCCTCTCCA+AGG | 0.586518 | 7.1:-2446588 | None:intergenic |
TGATCAAGATTTCCTTGGAG+AGG | 0.587520 | 7.1:+2446576 | MS.gene066540:CDS |
CTGAGGAGACGGTTGCTGCA+AGG | 0.588061 | 7.1:+2447525 | MS.gene066540:CDS |
GGCAATTACCATTCATGCTG+AGG | 0.588514 | 7.1:+2447508 | MS.gene066540:CDS |
ATAGAATAGTTGGTGGATGA+GGG | 0.588548 | 7.1:-2450155 | None:intergenic |
CACACGCAATGGACAAGAGA+AGG | 0.592432 | 7.1:+2448169 | MS.gene066540:CDS |
TTGAAAAGCTATACCAAGAG+AGG | 0.594777 | 7.1:+2448120 | MS.gene066540:CDS |
GTCATGCGATCCACACGCAA+TGG | 0.598090 | 7.1:+2448158 | MS.gene066540:CDS |
AGATAGTGACCAAACCGAGC+CGG | 0.598930 | 7.1:+2447429 | MS.gene066540:intron |
AGTTCTATGATTCTGATAAG+CGG | 0.602034 | 7.1:+2448775 | MS.gene066540:CDS |
ACCATTGTTCACGCAAGTCG+AGG | 0.603602 | 7.1:+2444761 | MS.gene066540:CDS |
TCTTCATTATAGGTTCTGAA+GGG | 0.604452 | 7.1:+2448269 | MS.gene066540:intron |
ATATCAAGAATTGTTGAGAG+TGG | 0.607665 | 7.1:+2447705 | MS.gene066540:CDS |
TCAAGAAACCATAAATGCTG+TGG | 0.616964 | 7.1:+2449608 | MS.gene066540:CDS |
AATAGTGGTCAAAGAAAACA+AGG | 0.618268 | 7.1:+2447485 | MS.gene066540:CDS |
AAGCTATACCAAGAGAGGAA+AGG | 0.630284 | 7.1:+2448125 | MS.gene066540:CDS |
TGGAGGATAACTTACACAAG+TGG | 0.637587 | 7.1:-2446074 | None:intergenic |
GGCGAGCTGCACTTTATCAG+AGG | 0.640723 | 7.1:+2446597 | MS.gene066540:CDS |
ACCTCGACTTGCGTGAACAA+TGG | 0.644495 | 7.1:-2444762 | None:intergenic |
ATATCATCGTGTTCCCACCA+AGG | 0.644557 | 7.1:+2446262 | MS.gene066540:CDS |
GGAGCCAAACAAGCCGTGGG+AGG | 0.650976 | 7.1:+2444663 | MS.gene066540:CDS |
TAGTGGTCAAAGAAAACAAG+GGG | 0.653678 | 7.1:+2447487 | MS.gene066540:CDS |
TGAGGGAACTGGGAAACAAG+TGG | 0.660023 | 7.1:-2450138 | None:intergenic |
AAAGGAGCCAAACAAGCCGT+GGG | 0.660216 | 7.1:+2444660 | MS.gene066540:CDS |
ATCACATCGATTTATCCGGT+CGG | 0.660360 | 7.1:+2448519 | MS.gene066540:CDS |
ATAACCGGGCCAAATAAAGT+GGG | 0.672309 | 7.1:-2449227 | None:intergenic |
ATTTATGTAGGCTATAATGG+AGG | 0.678956 | 7.1:+2448737 | MS.gene066540:intron |
TGTTATCCAAGTGAGAACAA+CGG | 0.696671 | 7.1:-2447568 | None:intergenic |
AGCGGTGTAGAAGAAATCGA+CGG | 0.704432 | 7.1:-2444727 | None:intergenic |
CAATGGTTGAAAACCTTGAG+CGG | 0.704968 | 7.1:-2444745 | None:intergenic |
CGCTGATTTCAAGAGCATGG+AGG | 0.715202 | 7.1:+2449680 | MS.gene066540:CDS |
TGGGAGTCTAACTAGCTCTG+AGG | 0.725481 | 7.1:+2448863 | MS.gene066540:CDS |
ATAGTGGTCAAAGAAAACAA+GGG | 0.750055 | 7.1:+2447486 | MS.gene066540:CDS |
TTTGGAGGAAAGATACCCAG+AGG | 0.762051 | 7.1:+2448813 | MS.gene066540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTCCATAATTATAAAAA+TGG | - | chr7.1:2445260-2445279 | None:intergenic | 10.0% |
!! | ATATAAAGCAATTTATATAT+AGG | - | chr7.1:2445436-2445455 | None:intergenic | 10.0% |
!! | TAATAAAATTTCTTCATTAT+AGG | + | chr7.1:2448259-2448278 | MS.gene066540:intron | 10.0% |
!! | TTCTAGTATTAATTAATTAA+AGG | - | chr7.1:2446682-2446701 | None:intergenic | 10.0% |
!! | AAAAGAAGTTAAAAAATTGT+AGG | - | chr7.1:2448659-2448678 | None:intergenic | 15.0% |
!! | AAATAAATAAGAAACATCAT+AGG | - | chr7.1:2445851-2445870 | None:intergenic | 15.0% |
!! | ATAAATAAAACAGATATGAT+GGG | - | chr7.1:2447635-2447654 | None:intergenic | 15.0% |
!! | TACTAAGATTTAATTATTAC+AGG | + | chr7.1:2449784-2449803 | MS.gene066540:intron | 15.0% |
!! | TATAAATAAAACAGATATGA+TGG | - | chr7.1:2447636-2447655 | None:intergenic | 15.0% |
!! | TTATTACTGAATGAAATTAA+TGG | - | chr7.1:2447233-2447252 | None:intergenic | 15.0% |
!!! | ACATCCTTTTAAATTATTAT+CGG | + | chr7.1:2445065-2445084 | MS.gene066540:intron | 15.0% |
!!! | ACTATGAATTATTTTAGATT+GGG | + | chr7.1:2446382-2446401 | MS.gene066540:intron | 15.0% |
!!! | CAATTTTTTAACTTCTTTTT+TGG | + | chr7.1:2448660-2448679 | MS.gene066540:intron | 15.0% |
!!! | TATACCAATATTTCAAATTT+TGG | + | chr7.1:2444858-2444877 | MS.gene066540:intron | 15.0% |
!! | AAATGAGAAATGAAATATCA+AGG | - | chr7.1:2445526-2445545 | None:intergenic | 20.0% |
!! | ACAACAATTTAAATCCAAAA+TGG | + | chr7.1:2447763-2447782 | MS.gene066540:CDS | 20.0% |
!! | ACAACCGATAATAATTTAAA+AGG | - | chr7.1:2445072-2445091 | None:intergenic | 20.0% |
!! | ATAGTTAACGATTAATCAAT+TGG | - | chr7.1:2445411-2445430 | None:intergenic | 20.0% |
!! | ATGAAAGTCAAAAATTGATT+AGG | - | chr7.1:2450099-2450118 | None:intergenic | 20.0% |
!! | GAAAACAAAAGTCAAAAAAT+AGG | - | chr7.1:2445617-2445636 | None:intergenic | 20.0% |
!! | GAAATTGAGTTTATTAAAGA+AGG | - | chr7.1:2448988-2449007 | None:intergenic | 20.0% |
!! | TAAAATGCAGAGTTATTATA+TGG | - | chr7.1:2446300-2446319 | None:intergenic | 20.0% |
!! | TAGTTAACGATTAATCAATT+GGG | - | chr7.1:2445410-2445429 | None:intergenic | 20.0% |
!! | TCTCATTATTGAAATTTCTA+TGG | + | chr7.1:2447145-2447164 | MS.gene066540:intron | 20.0% |
!! | TGATTGAAAAAAACAGTATA+GGG | - | chr7.1:2446355-2446374 | None:intergenic | 20.0% |
!! | TGTAGTATGAGATTATATTT+GGG | - | chr7.1:2447113-2447132 | None:intergenic | 20.0% |
!!! | AAAGTCTTTTAATCTTATGT+CGG | - | chr7.1:2447365-2447384 | None:intergenic | 20.0% |
!!! | AAGAAATTTTATTAAGTGTG+AGG | - | chr7.1:2448253-2448272 | None:intergenic | 20.0% |
!!! | AAGTTGATGATTAAAAAAGT+TGG | - | chr7.1:2448592-2448611 | None:intergenic | 20.0% |
!!! | ATCGAATTTGTGTTATATTT+TGG | + | chr7.1:2448210-2448229 | MS.gene066540:intron | 20.0% |
!!! | ATTGATGAGAAAGAATTTTA+TGG | + | chr7.1:2446852-2446871 | MS.gene066540:intron | 20.0% |
!!! | CAAATAGTATATTTGAAGTA+AGG | - | chr7.1:2445639-2445658 | None:intergenic | 20.0% |
!!! | CACTATGAATTATTTTAGAT+TGG | + | chr7.1:2446381-2446400 | MS.gene066540:intron | 20.0% |
!!! | CTATGAATTATTTTAGATTG+GGG | + | chr7.1:2446383-2446402 | MS.gene066540:intron | 20.0% |
!!! | GAAAATAATTTTCAAAACCA+TGG | - | chr7.1:2446888-2446907 | None:intergenic | 20.0% |
!!! | TAGTCCAAAATTTGAAATAT+TGG | - | chr7.1:2444865-2444884 | None:intergenic | 20.0% |
!!! | TATAGTTTTCTTATGTGTTT+AGG | + | chr7.1:2449139-2449158 | MS.gene066540:intron | 20.0% |
!!! | TCGTACCATTTTTATAATTA+TGG | + | chr7.1:2445252-2445271 | MS.gene066540:intron | 20.0% |
!!! | TGTTATTTAATAACCTGAAA+CGG | + | chr7.1:2445811-2445830 | MS.gene066540:intron | 20.0% |
!!! | TTCAATAATGTACAACTTTT+GGG | + | chr7.1:2446746-2446765 | MS.gene066540:intron | 20.0% |
!!! | TTTAATTTTTTTCTCTATGC+AGG | + | chr7.1:2447898-2447917 | MS.gene066540:intron | 20.0% |
!!! | TTTCTGTTTTTTTAGTACAA+TGG | + | chr7.1:2448896-2448915 | MS.gene066540:intron | 20.0% |
! | AAACAAATGAAATACTGTAG+TGG | - | chr7.1:2446640-2446659 | None:intergenic | 25.0% |
! | AAAGAAAAAACTTCAGCATT+AGG | + | chr7.1:2446444-2446463 | MS.gene066540:intron | 25.0% |
! | AAATGTGAACGTTAGAAATA+TGG | - | chr7.1:2447042-2447061 | None:intergenic | 25.0% |
! | AAGAAAAAACTTCAGCATTA+GGG | + | chr7.1:2446445-2446464 | MS.gene066540:intron | 25.0% |
! | AAGAAACATCATAGGAAAAA+AGG | - | chr7.1:2445843-2445862 | None:intergenic | 25.0% |
! | AAGTCACATAGATATATGAT+TGG | - | chr7.1:2449425-2449444 | None:intergenic | 25.0% |
! | ACAATTTATGTAGGCTATAA+TGG | + | chr7.1:2448734-2448753 | MS.gene066540:intron | 25.0% |
! | ATAACACAAATTCGATTTCA+GGG | - | chr7.1:2448206-2448225 | None:intergenic | 25.0% |
! | ATATAGCAATGAGATTTATG+AGG | + | chr7.1:2446147-2446166 | MS.gene066540:intron | 25.0% |
! | ATTCTTGATATCCTTAGAAA+AGG | - | chr7.1:2447696-2447715 | None:intergenic | 25.0% |
! | CTATGTATTGCTTATCATAA+CGG | + | chr7.1:2449307-2449326 | MS.gene066540:CDS | 25.0% |
! | CTGATTGAAAAAAACAGTAT+AGG | - | chr7.1:2446356-2446375 | None:intergenic | 25.0% |
! | CTGTAGTATGAGATTATATT+TGG | - | chr7.1:2447114-2447133 | None:intergenic | 25.0% |
! | GATTTAATTATTACAGGTAC+TGG | + | chr7.1:2449790-2449809 | MS.gene066540:intron | 25.0% |
! | GTAAGAAGATAAGTAAAGTT+TGG | + | chr7.1:2445345-2445364 | MS.gene066540:intron | 25.0% |
! | GTTACATAAAAATGTCTTCA+TGG | + | chr7.1:2445490-2445509 | MS.gene066540:intron | 25.0% |
! | TATAAAGCCTAAAGAAGTTT+AGG | - | chr7.1:2448016-2448035 | None:intergenic | 25.0% |
! | TATAACACAAATTCGATTTC+AGG | - | chr7.1:2448207-2448226 | None:intergenic | 25.0% |
! | TATAGCCTACATAAATTGTA+GGG | - | chr7.1:2448733-2448752 | None:intergenic | 25.0% |
! | TCATAACACTCAATAAGTAA+TGG | - | chr7.1:2447929-2447948 | None:intergenic | 25.0% |
! | TCGGTTAAATTCATATCAAA+AGG | + | chr7.1:2448538-2448557 | MS.gene066540:CDS | 25.0% |
! | TGTCAATCAATTATAATCGT+CGG | - | chr7.1:2449486-2449505 | None:intergenic | 25.0% |
! | TTATAGCCTACATAAATTGT+AGG | - | chr7.1:2448734-2448753 | None:intergenic | 25.0% |
! | TTTGCAATAAAAAGTTGTGA+TGG | + | chr7.1:2446476-2446495 | MS.gene066540:intron | 25.0% |
!! | CTTCAATAATGTACAACTTT+TGG | + | chr7.1:2446745-2446764 | MS.gene066540:intron | 25.0% |
!! | TTTATGGAAATTTTGTTCCA+TGG | + | chr7.1:2446868-2446887 | MS.gene066540:intron | 25.0% |
!! | TTTTCTTTCAAGAATTTAGC+AGG | - | chr7.1:2446432-2446451 | None:intergenic | 25.0% |
!!! | AGCTATTTTTCTATTGACTA+AGG | + | chr7.1:2448402-2448421 | MS.gene066540:intron | 25.0% |
!!! | ATCATTAAAGTTGATGAATG+AGG | - | chr7.1:2449012-2449031 | None:intergenic | 25.0% |
!!! | CTCATTGTTTTAATCTGAAT+GGG | + | chr7.1:2448844-2448863 | MS.gene066540:CDS | 25.0% |
!!! | TCTCATTGTTTTAATCTGAA+TGG | + | chr7.1:2448843-2448862 | MS.gene066540:CDS | 25.0% |
!!! | TTTTTTGGTTCTAAGTAACT+TGG | + | chr7.1:2448675-2448694 | MS.gene066540:intron | 25.0% |
AAAAAATTGTAGGATCACAG+TGG | - | chr7.1:2448649-2448668 | None:intergenic | 30.0% | |
AAAAACATTGGATGTAGTAG+TGG | - | chr7.1:2445890-2445909 | None:intergenic | 30.0% | |
AAAAATGGTACGACATGTTT+GGG | - | chr7.1:2445245-2445264 | None:intergenic | 30.0% | |
AAAAATTGTAGGATCACAGT+GGG | - | chr7.1:2448648-2448667 | None:intergenic | 30.0% | |
AAACATCATAGGAAAAAAGG+TGG | - | chr7.1:2445840-2445859 | None:intergenic | 30.0% | |
AAGTTACAAGTAATTGACCA+AGG | - | chr7.1:2445670-2445689 | None:intergenic | 30.0% | |
AAGTTGTACATTATTGAAGC+TGG | - | chr7.1:2446744-2446763 | None:intergenic | 30.0% | |
AATAGTGGTCAAAGAAAACA+AGG | + | chr7.1:2447485-2447504 | MS.gene066540:CDS | 30.0% | |
ACAATCTATATCAGCAGTAA+AGG | - | chr7.1:2444825-2444844 | None:intergenic | 30.0% | |
ACCAACTATAAGAATCGATA+AGG | - | chr7.1:2449652-2449671 | None:intergenic | 30.0% | |
ACCTGAAAGAAAGTAAAATG+AGG | - | chr7.1:2446217-2446236 | None:intergenic | 30.0% | |
ACCTGTCAAAAACACAATAA+TGG | - | chr7.1:2450037-2450056 | None:intergenic | 30.0% | |
AGTGGAAATCATGTACTTAT+AGG | + | chr7.1:2447959-2447978 | MS.gene066540:CDS | 30.0% | |
AGTTCTATGATTCTGATAAG+CGG | + | chr7.1:2448775-2448794 | MS.gene066540:CDS | 30.0% | |
ATAAGTTTCGTTACAGTTCA+GGG | + | chr7.1:2449052-2449071 | MS.gene066540:intron | 30.0% | |
ATAGTGACATCAATGTTTGT+TGG | + | chr7.1:2448065-2448084 | MS.gene066540:intron | 30.0% | |
ATAGTGGTCAAAGAAAACAA+GGG | + | chr7.1:2447486-2447505 | MS.gene066540:CDS | 30.0% | |
ATATCAAGAATTGTTGAGAG+TGG | + | chr7.1:2447705-2447724 | MS.gene066540:CDS | 30.0% | |
ATGTTAAGGAAAAGAAACTC+AGG | - | chr7.1:2449722-2449741 | None:intergenic | 30.0% | |
ATTTATGTAGGCTATAATGG+AGG | + | chr7.1:2448737-2448756 | MS.gene066540:intron | 30.0% | |
CAAAACAAAAGATGGAATAG+TGG | + | chr7.1:2447470-2447489 | MS.gene066540:CDS | 30.0% | |
CATTCTGGATTCAAAGAATT+CGG | - | chr7.1:2446011-2446030 | None:intergenic | 30.0% | |
CCAACTATAAGAATCGATAA+GGG | - | chr7.1:2449651-2449670 | None:intergenic | 30.0% | |
CCTGAAAGAAAGTAAAATGA+GGG | - | chr7.1:2446216-2446235 | None:intergenic | 30.0% | |
CCTGTCAAAAACACAATAAT+GGG | - | chr7.1:2450036-2450055 | None:intergenic | 30.0% | |
CTGTCAAAAACACAATAATG+GGG | - | chr7.1:2450035-2450054 | None:intergenic | 30.0% | |
CTTCAACCGACTATTATTAT+CGG | + | chr7.1:2445108-2445127 | MS.gene066540:intron | 30.0% | |
GATTCCCTTTCATCATATAA+CGG | + | chr7.1:2449275-2449294 | MS.gene066540:CDS | 30.0% | |
GTAAGCTTGATATTTGTCAA+TGG | + | chr7.1:2448560-2448579 | MS.gene066540:intron | 30.0% | |
GTGGAAATCATGTACTTATA+GGG | + | chr7.1:2447960-2447979 | MS.gene066540:CDS | 30.0% | |
TAAAAATGGTACGACATGTT+TGG | - | chr7.1:2445246-2445265 | None:intergenic | 30.0% | |
TAAAAGACTTTGTGTGACAT+TGG | + | chr7.1:2447374-2447393 | MS.gene066540:intron | 30.0% | |
TACAGCTTCAAAACAAAAGA+TGG | + | chr7.1:2447462-2447481 | MS.gene066540:CDS | 30.0% | |
TATAAGTTTCGTTACAGTTC+AGG | + | chr7.1:2449051-2449070 | MS.gene066540:intron | 30.0% | |
TGATGGAAACAATTACAGTT+GGG | - | chr7.1:2445300-2445319 | None:intergenic | 30.0% | |
TGGATTTGAACTAAACTTCA+TGG | + | chr7.1:2448355-2448374 | MS.gene066540:CDS | 30.0% | |
TGTGGATCAATATTGTGAAA+AGG | + | chr7.1:2448301-2448320 | MS.gene066540:CDS | 30.0% | |
TGTTATGATTTCAATAGCAG+TGG | + | chr7.1:2447941-2447960 | MS.gene066540:CDS | 30.0% | |
TGTTTAGCCTAAACTTCTTT+AGG | + | chr7.1:2448006-2448025 | MS.gene066540:intron | 30.0% | |
TTAACTTCAGTCTTGCAAAT+AGG | - | chr7.1:2447741-2447760 | None:intergenic | 30.0% | |
TTAGATTGGGGTAAAATACA+GGG | + | chr7.1:2446395-2446414 | MS.gene066540:intron | 30.0% | |
TTCATGATTGATGAGTAAGA+GGG | - | chr7.1:2449089-2449108 | None:intergenic | 30.0% | |
TTGATATGAATTTAACCGAC+CGG | - | chr7.1:2448537-2448556 | None:intergenic | 30.0% | |
TTGATGGAAACAATTACAGT+TGG | - | chr7.1:2445301-2445320 | None:intergenic | 30.0% | |
TTGGTCAATTACTTGTAACT+TGG | + | chr7.1:2445669-2445688 | MS.gene066540:intron | 30.0% | |
TTGTAACAAACAAACTCTTG+CGG | + | chr7.1:2447070-2447089 | MS.gene066540:intron | 30.0% | |
TTTACACTGTCAAACAATCA+CGG | + | chr7.1:2449399-2449418 | MS.gene066540:intron | 30.0% | |
TTTAGATTGGGGTAAAATAC+AGG | + | chr7.1:2446394-2446413 | MS.gene066540:intron | 30.0% | |
TTTATTTCAGAGTGATCCTA+TGG | + | chr7.1:2445923-2445942 | MS.gene066540:intron | 30.0% | |
TTTGTGTACACTTGTATGTA+TGG | - | chr7.1:2445178-2445197 | None:intergenic | 30.0% | |
! | AAATGTCTTATTGCAGAATG+TGG | - | chr7.1:2446776-2446795 | None:intergenic | 30.0% |
! | AATGTCTTATTGCAGAATGT+GGG | - | chr7.1:2446775-2446794 | None:intergenic | 30.0% |
! | TAAATTGTAGGGTGTTCATT+AGG | - | chr7.1:2448722-2448741 | None:intergenic | 30.0% |
! | TGAGTTTCTTTTCCTTAACA+TGG | + | chr7.1:2449721-2449740 | MS.gene066540:intron | 30.0% |
! | TGATGATGACGAATTAGAAA+TGG | - | chr7.1:2444796-2444815 | None:intergenic | 30.0% |
! | TTCTTCATTATAGGTTCTGA+AGG | + | chr7.1:2448268-2448287 | MS.gene066540:intron | 30.0% |
! | TTTATTGACTACGTATCTAG+TGG | + | chr7.1:2448335-2448354 | MS.gene066540:CDS | 30.0% |
!! | ATTATTGTGTTTTTGACAGG+TGG | + | chr7.1:2450036-2450055 | MS.gene066540:intron | 30.0% |
!! | CTTAGTACTTGTTATTCTCT+TGG | - | chr7.1:2449771-2449790 | None:intergenic | 30.0% |
!! | CTTCATTGACAAAAGTACTT+TGG | - | chr7.1:2445563-2445582 | None:intergenic | 30.0% |
!! | TATGGTTAGTTTACAAACCT+TGG | - | chr7.1:2446282-2446301 | None:intergenic | 30.0% |
!! | TATTGCATTCCATTTTGAGA+TGG | + | chr7.1:2446046-2446065 | MS.gene066540:CDS | 30.0% |
!! | TCTTCATTATAGGTTCTGAA+GGG | + | chr7.1:2448269-2448288 | MS.gene066540:intron | 30.0% |
!! | TTCTTATGTGTTTAGGTTGT+AGG | + | chr7.1:2449146-2449165 | MS.gene066540:intron | 30.0% |
!!! | CTGATTTTTTCTATCCATTC+TGG | - | chr7.1:2446026-2446045 | None:intergenic | 30.0% |
!!! | TCTCTTGTTTTTGTGTACTA+TGG | + | chr7.1:2447401-2447420 | MS.gene066540:intron | 30.0% |
!!! | TCTTTTGTTTTGAAGCTGTA+CGG | - | chr7.1:2447462-2447481 | None:intergenic | 30.0% |
AAAAAACACACACATGTAGC+TGG | + | chr7.1:2447296-2447315 | MS.gene066540:intron | 35.0% | |
AAAGAAAGGAGATGGAAGAT+TGG | + | chr7.1:2445959-2445978 | MS.gene066540:CDS | 35.0% | |
AGACCATAAGTAATTGACCA+AGG | - | chr7.1:2445697-2445716 | None:intergenic | 35.0% | |
AGAGCCGTTATATGATGAAA+GGG | - | chr7.1:2449282-2449301 | None:intergenic | 35.0% | |
AGCTTGTAACTTACTTGATC+TGG | + | chr7.1:2445746-2445765 | MS.gene066540:CDS | 35.0% | |
AGGGAGAGAGAGTTATATAT+AGG | - | chr7.1:2446197-2446216 | None:intergenic | 35.0% | |
CCATCAAATCAATTCAGCTT+CGG | + | chr7.1:2445314-2445333 | MS.gene066540:intron | 35.0% | |
CGAATTCTTTGAATCCAGAA+TGG | + | chr7.1:2446009-2446028 | MS.gene066540:CDS | 35.0% | |
CGACAACCGATAATAATAGT+CGG | - | chr7.1:2445117-2445136 | None:intergenic | 35.0% | |
CTTACTTTGTACTTCTCTCA+TGG | - | chr7.1:2449888-2449907 | None:intergenic | 35.0% | |
GAAACAATTACAGTTGGGTT+TGG | - | chr7.1:2445295-2445314 | None:intergenic | 35.0% | |
GAACACCCTACAATTTATGT+AGG | + | chr7.1:2448725-2448744 | MS.gene066540:intron | 35.0% | |
GAACCTTGGTCAATTACTTA+TGG | + | chr7.1:2445691-2445710 | MS.gene066540:intron | 35.0% | |
GAATTTAGCAGGCTATAAGT+AGG | - | chr7.1:2446421-2446440 | None:intergenic | 35.0% | |
GACATTAACGCGTATGAATA+TGG | - | chr7.1:2445010-2445029 | None:intergenic | 35.0% | |
GATAACAAAGCATACTTAGC+AGG | - | chr7.1:2449749-2449768 | None:intergenic | 35.0% | |
GATGACGAATTAGAAATGGT+TGG | - | chr7.1:2444792-2444811 | None:intergenic | 35.0% | |
GATGGAAGATTGGAAGAATT+AGG | + | chr7.1:2445969-2445988 | MS.gene066540:CDS | 35.0% | |
GCTAATATGTATGAGGTCAA+TGG | - | chr7.1:2446722-2446741 | None:intergenic | 35.0% | |
GCTTATCAGAATCATAGAAC+TGG | - | chr7.1:2448776-2448795 | None:intergenic | 35.0% | |
GTATATGCAAAGAAAGGAGA+TGG | + | chr7.1:2445951-2445970 | MS.gene066540:CDS | 35.0% | |
GTTCATGATTGATGAGTAAG+AGG | - | chr7.1:2449090-2449109 | None:intergenic | 35.0% | |
GTTGTGGTATATGCAAAGAA+AGG | + | chr7.1:2445945-2445964 | MS.gene066540:CDS | 35.0% | |
TACTATTTGTCATTGAGCCT+TGG | + | chr7.1:2445650-2445669 | MS.gene066540:intron | 35.0% | |
TAGAGCCGTTATATGATGAA+AGG | - | chr7.1:2449283-2449302 | None:intergenic | 35.0% | |
TAGTGGTCAAAGAAAACAAG+GGG | + | chr7.1:2447487-2447506 | MS.gene066540:CDS | 35.0% | |
TATAAACTTGGCTGCACAAA+TGG | + | chr7.1:2449247-2449266 | MS.gene066540:CDS | 35.0% | |
TCAAGAAACCATAAATGCTG+TGG | + | chr7.1:2449608-2449627 | MS.gene066540:CDS | 35.0% | |
TGAACTAAACTTCATGGTTG+CGG | + | chr7.1:2448361-2448380 | MS.gene066540:CDS | 35.0% | |
TGCTGGAAATTAAGACAAAG+TGG | - | chr7.1:2447792-2447811 | None:intergenic | 35.0% | |
TGCTTTAACCACAGCATTTA+TGG | - | chr7.1:2449619-2449638 | None:intergenic | 35.0% | |
TGTAATCACATGTGTCATGT+CGG | - | chr7.1:2445038-2445057 | None:intergenic | 35.0% | |
TGTCTTAATTTCCAGCAGTT+TGG | + | chr7.1:2447795-2447814 | MS.gene066540:CDS | 35.0% | |
TGTTATCCAAGTGAGAACAA+CGG | - | chr7.1:2447571-2447590 | None:intergenic | 35.0% | |
TTACTTGTAACTTGGAACCT+TGG | + | chr7.1:2445677-2445696 | MS.gene066540:intron | 35.0% | |
TTACTTTACTTCCAAACTGC+TGG | - | chr7.1:2447809-2447828 | None:intergenic | 35.0% | |
TTGAAAAGCTATACCAAGAG+AGG | + | chr7.1:2448120-2448139 | MS.gene066540:CDS | 35.0% | |
TTTGCATATACCACAACCAT+AGG | - | chr7.1:2445942-2445961 | None:intergenic | 35.0% | |
! | ATGTCTTATTGCAGAATGTG+GGG | - | chr7.1:2446774-2446793 | None:intergenic | 35.0% |
! | CCCTCATTTTACTTTCTTTC+AGG | + | chr7.1:2446213-2446232 | MS.gene066540:intron | 35.0% |
! | GTTAGTTTACAAACCTTGGT+GGG | - | chr7.1:2446278-2446297 | None:intergenic | 35.0% |
! | TCGATTCTTATAGTTGGTGT+TGG | + | chr7.1:2449654-2449673 | MS.gene066540:CDS | 35.0% |
! | TCGTGTTTTTCTGACATGAA+AGG | + | chr7.1:2444642-2444661 | MS.gene066540:CDS | 35.0% |
! | TCTCTTGGTATAGCTTTTCA+AGG | - | chr7.1:2448121-2448140 | None:intergenic | 35.0% |
! | TCTTGTAGGATCCTTTTCTA+AGG | + | chr7.1:2447682-2447701 | MS.gene066540:intron | 35.0% |
!! | ATAGAATAGTTGGTGGATGA+GGG | - | chr7.1:2450158-2450177 | None:intergenic | 35.0% |
!! | CCCATTATTGTGTTTTTGAC+AGG | + | chr7.1:2450033-2450052 | MS.gene066540:intron | 35.0% |
!! | CCCTTATCGATTCTTATAGT+TGG | + | chr7.1:2449648-2449667 | MS.gene066540:CDS | 35.0% |
!! | TATAGAATAGTTGGTGGATG+AGG | - | chr7.1:2450159-2450178 | None:intergenic | 35.0% |
!! | TTGCATCACATCGATTTATC+CGG | + | chr7.1:2448515-2448534 | MS.gene066540:CDS | 35.0% |
!!! | ATGTAGTAGTGGTTTTAGCT+AGG | - | chr7.1:2445879-2445898 | None:intergenic | 35.0% |
!!! | CTCATCTTGCTTTTTCTTGT+AGG | + | chr7.1:2447668-2447687 | MS.gene066540:intron | 35.0% |
AAGCTATACCAAGAGAGGAA+AGG | + | chr7.1:2448125-2448144 | MS.gene066540:CDS | 40.0% | |
AAGGAAAAGAAACTCAGGCA+AGG | - | chr7.1:2449717-2449736 | None:intergenic | 40.0% | |
ACAAAGCACAGCATTTATGC+AGG | - | chr7.1:2446121-2446140 | None:intergenic | 40.0% | |
ACAATGAGATACGATACCTC+TGG | - | chr7.1:2448832-2448851 | None:intergenic | 40.0% | |
ACAGGCACATGAAAGATAGA+TGG | - | chr7.1:2446097-2446116 | None:intergenic | 40.0% | |
AGACATGTTGTGCACAAAGA+TGG | - | chr7.1:2447837-2447856 | None:intergenic | 40.0% | |
ATAACCGGGCCAAATAAAGT+GGG | - | chr7.1:2449230-2449249 | None:intergenic | 40.0% | |
ATTTGGCCCGGTTATAAACT+TGG | + | chr7.1:2449235-2449254 | MS.gene066540:CDS | 40.0% | |
CAATGAGATACGATACCTCT+GGG | - | chr7.1:2448831-2448850 | None:intergenic | 40.0% | |
CAATGGTTGAAAACCTTGAG+CGG | - | chr7.1:2444748-2444767 | None:intergenic | 40.0% | |
CTATCAGGACCCACTTTATT+TGG | + | chr7.1:2449218-2449237 | MS.gene066540:CDS | 40.0% | |
CTGAGTGATCAAGATTTCCT+TGG | + | chr7.1:2446571-2446590 | MS.gene066540:CDS | 40.0% | |
GAAGCTGGCTAATATGTATG+AGG | - | chr7.1:2446729-2446748 | None:intergenic | 40.0% | |
GACGAATTAGAAATGGTTGG+TGG | - | chr7.1:2444789-2444808 | None:intergenic | 40.0% | |
GATATGTGTCCAGCTTCAAA+TGG | + | chr7.1:2448470-2448489 | MS.gene066540:intron | 40.0% | |
TATAACCGGGCCAAATAAAG+TGG | - | chr7.1:2449231-2449250 | None:intergenic | 40.0% | |
TATCTTCCGTTGTTCTCACT+TGG | + | chr7.1:2447562-2447581 | MS.gene066540:CDS | 40.0% | |
TCAAGAATTGTTGAGAGTGG+TGG | + | chr7.1:2447708-2447727 | MS.gene066540:CDS | 40.0% | |
TCCCAACTAAGATTCGAACT+CGG | + | chr7.1:2445379-2445398 | MS.gene066540:intron | 40.0% | |
TCGATGTGATGCAAAGAATC+TGG | - | chr7.1:2448509-2448528 | None:intergenic | 40.0% | |
TGATCAAGATTTCCTTGGAG+AGG | + | chr7.1:2446576-2446595 | MS.gene066540:CDS | 40.0% | |
TGATCTGGACATTGCATCAA+AGG | + | chr7.1:2445761-2445780 | MS.gene066540:CDS | 40.0% | |
TGGAGGATAACTTACACAAG+TGG | - | chr7.1:2446077-2446096 | None:intergenic | 40.0% | |
TGTGCAGCCAAGTTTATAAC+CGG | - | chr7.1:2449245-2449264 | None:intergenic | 40.0% | |
! | AAACAGATATGATGGGAGCT+AGG | - | chr7.1:2447628-2447647 | None:intergenic | 40.0% |
! | AGACAAAGTGGTCTCCATTT+TGG | - | chr7.1:2447780-2447799 | None:intergenic | 40.0% |
! | ATGTAGGCTATAATGGAGGT+TGG | + | chr7.1:2448741-2448760 | MS.gene066540:intron | 40.0% |
! | TGAGGATTTCCATTTGAAGC+TGG | - | chr7.1:2448482-2448501 | None:intergenic | 40.0% |
! | TGTAGGAGTTGAAGGCATAA+TGG | + | chr7.1:2449163-2449182 | MS.gene066540:CDS | 40.0% |
!! | ATCACATCGATTTATCCGGT+CGG | + | chr7.1:2448519-2448538 | MS.gene066540:CDS | 40.0% |
!! | CCGAAGCTGAATTGATTTGA+TGG | - | chr7.1:2445317-2445336 | None:intergenic | 40.0% |
!! | GAAGGCATAATGGATGCTTA+TGG | + | chr7.1:2449173-2449192 | MS.gene066540:CDS | 40.0% |
!! | GGACAAGAGAAGGTATTCAT+TGG | + | chr7.1:2448179-2448198 | MS.gene066540:intron | 40.0% |
!! | GGTTAGTTTACAAACCTTGG+TGG | - | chr7.1:2446279-2446298 | None:intergenic | 40.0% |
!! | GTTTAGGTTGTAGGAGTTGA+AGG | + | chr7.1:2449155-2449174 | MS.gene066540:intron | 40.0% |
AAAAAGGTGGCAACCGTTTC+AGG | - | chr7.1:2445827-2445846 | None:intergenic | 45.0% | |
AATGTCCATGATCTTCCCGT+AGG | + | chr7.1:2449566-2449585 | MS.gene066540:intron | 45.0% | |
AATTTGCGCCTTTCCTCTCT+TGG | - | chr7.1:2448136-2448155 | None:intergenic | 45.0% | |
ACTTAGCAGGAGCCATGTTA+AGG | - | chr7.1:2449736-2449755 | None:intergenic | 45.0% | |
AGCGGTGTAGAAGAAATCGA+CGG | - | chr7.1:2444730-2444749 | None:intergenic | 45.0% | |
ATATCATCGTGTTCCCACCA+AGG | + | chr7.1:2446262-2446281 | MS.gene066540:CDS | 45.0% | |
ATGGTTGCGGTAGATTTCAC+TGG | + | chr7.1:2448374-2448393 | MS.gene066540:CDS | 45.0% | |
CACAGCATTTATGCAGGAAC+AGG | - | chr7.1:2446115-2446134 | None:intergenic | 45.0% | |
CCCAACTAAGATTCGAACTC+GGG | + | chr7.1:2445380-2445399 | MS.gene066540:intron | 45.0% | |
CCCGAGTTCGAATCTTAGTT+GGG | - | chr7.1:2445383-2445402 | None:intergenic | 45.0% | |
CGTCGCTTAGAAAGTTCTAC+TGG | + | chr7.1:2449827-2449846 | MS.gene066540:CDS | 45.0% | |
GATTTCTTCTACACCGCTCA+AGG | + | chr7.1:2444732-2444751 | MS.gene066540:CDS | 45.0% | |
GGCAATTACCATTCATGCTG+AGG | + | chr7.1:2447508-2447527 | MS.gene066540:CDS | 45.0% | |
GGCACATGAAAGATAGATGG+AGG | - | chr7.1:2446094-2446113 | None:intergenic | 45.0% | |
GTGCAGCCAAGTTTATAACC+GGG | - | chr7.1:2449244-2449263 | None:intergenic | 45.0% | |
GTGGTTGCACCATCTCAAAA+TGG | - | chr7.1:2446058-2446077 | None:intergenic | 45.0% | |
GTTTCGTTACAGTTCAGGGA+AGG | + | chr7.1:2449056-2449075 | MS.gene066540:intron | 45.0% | |
TACCATTCATGCTGAGGAGA+CGG | + | chr7.1:2447514-2447533 | MS.gene066540:CDS | 45.0% | |
TCAGAGTGATCCTATGGTTG+TGG | + | chr7.1:2445929-2445948 | MS.gene066540:intron | 45.0% | |
TCCGTAACAACTCCATCCTA+CGG | - | chr7.1:2449585-2449604 | None:intergenic | 45.0% | |
TCTGAAGGGTCAACTCTTTG+TGG | + | chr7.1:2448283-2448302 | MS.gene066540:CDS | 45.0% | |
TGATAAGCGGTTTCCTGCTT+GGG | + | chr7.1:2448788-2448807 | MS.gene066540:CDS | 45.0% | |
TGCAAAGAATCTGGCTGTTG+AGG | - | chr7.1:2448500-2448519 | None:intergenic | 45.0% | |
TTGAGCATTAACACCTCCCA+CGG | - | chr7.1:2444679-2444698 | None:intergenic | 45.0% | |
TTTGGAGGAAAGATACCCAG+AGG | + | chr7.1:2448813-2448832 | MS.gene066540:CDS | 45.0% | |
! | CTCTGTTGTGCAAGCTCTTT+TGG | + | chr7.1:2450065-2450084 | MS.gene066540:CDS | 45.0% |
! | GGCGTCATTGTTGTTGTTAG+TGG | - | chr7.1:2444709-2444728 | None:intergenic | 45.0% |
! | TGTTGTGCAAGCTCTTTTGG+AGG | + | chr7.1:2450068-2450087 | MS.gene066540:CDS | 45.0% |
!! | AAGCGCTGATTTCAAGAGCA+TGG | + | chr7.1:2449677-2449696 | MS.gene066540:CDS | 45.0% |
!! | CAGGTACTGGATGCTGATAA+TGG | + | chr7.1:2449803-2449822 | MS.gene066540:intron | 45.0% |
!! | GGAGGTGTTAATGCTCAAAC+TGG | + | chr7.1:2444681-2444700 | MS.gene066540:CDS | 45.0% |
!! | AATAAAAAATAAAAAAACAT+TGG | - | chr7.1:2445902-2445921 | None:intergenic | 5.0% |
AAAGGAGCCAAACAAGCCGT+GGG | + | chr7.1:2444660-2444679 | MS.gene066540:CDS | 50.0% | |
AACCGTCTCCTCAGCATGAA+TGG | - | chr7.1:2447519-2447538 | None:intergenic | 50.0% | |
ACCATTGTTCACGCAAGTCG+AGG | + | chr7.1:2444761-2444780 | MS.gene066540:CDS | 50.0% | |
AGATAGTGACCAAACCGAGC+CGG | + | chr7.1:2447429-2447448 | MS.gene066540:intron | 50.0% | |
CAATTCAGCTTCGGCTGAAC+TGG | + | chr7.1:2445323-2445342 | MS.gene066540:intron | 50.0% | |
CACACGCAATGGACAAGAGA+AGG | + | chr7.1:2448169-2448188 | MS.gene066540:CDS | 50.0% | |
CCCGTAGGATGGAGTTGTTA+CGG | + | chr7.1:2449581-2449600 | MS.gene066540:intron | 50.0% | |
CCGTAACAACTCCATCCTAC+GGG | - | chr7.1:2449584-2449603 | None:intergenic | 50.0% | |
CTACGCAGTGTCAGTCTATC+AGG | + | chr7.1:2449203-2449222 | MS.gene066540:CDS | 50.0% | |
CTGATAAGCGGTTTCCTGCT+TGG | + | chr7.1:2448787-2448806 | MS.gene066540:CDS | 50.0% | |
CTTCTCTTGTCCATTGCGTG+TGG | - | chr7.1:2448171-2448190 | None:intergenic | 50.0% | |
GAAGCTGTACGGTTAAGCTC+CGG | - | chr7.1:2447451-2447470 | None:intergenic | 50.0% | |
GATAAGCGGTTTCCTGCTTG+GGG | + | chr7.1:2448789-2448808 | MS.gene066540:CDS | 50.0% | |
GCCCGAGTTCGAATCTTAGT+TGG | - | chr7.1:2445384-2445403 | None:intergenic | 50.0% | |
TCCATCCTACGGGAAGATCA+TGG | - | chr7.1:2449574-2449593 | None:intergenic | 50.0% | |
TCCATGATCTTCCCGTAGGA+TGG | + | chr7.1:2449570-2449589 | MS.gene066540:intron | 50.0% | |
TGAGGGAACTGGGAAACAAG+TGG | - | chr7.1:2450141-2450160 | None:intergenic | 50.0% | |
TTTCCTCCAAATCCCCAAGC+AGG | - | chr7.1:2448804-2448823 | None:intergenic | 50.0% | |
TTTCCTGCTTGGGGATTTGG+AGG | + | chr7.1:2448798-2448817 | MS.gene066540:CDS | 50.0% | |
! | ACCTCGACTTGCGTGAACAA+TGG | - | chr7.1:2444765-2444784 | None:intergenic | 50.0% |
! | AGGACCCACTTTATTTGGCC+CGG | + | chr7.1:2449223-2449242 | MS.gene066540:CDS | 50.0% |
!! | AGTTGGTGGATGAGGGAACT+GGG | - | chr7.1:2450151-2450170 | None:intergenic | 50.0% |
!! | CGCTGATTTCAAGAGCATGG+AGG | + | chr7.1:2449680-2449699 | MS.gene066540:CDS | 50.0% |
!! | TAGTTGGTGGATGAGGGAAC+TGG | - | chr7.1:2450152-2450171 | None:intergenic | 50.0% |
!! | TGGGAGTCTAACTAGCTCTG+AGG | + | chr7.1:2448863-2448882 | MS.gene066540:CDS | 50.0% |
CGGTTTCCTGCTTGGGGATT+TGG | + | chr7.1:2448795-2448814 | MS.gene066540:CDS | 55.0% | |
GAAAGGAGCCAAACAAGCCG+TGG | + | chr7.1:2444659-2444678 | MS.gene066540:CDS | 55.0% | |
GGCGAGCTGCACTTTATCAG+AGG | + | chr7.1:2446597-2446616 | MS.gene066540:CDS | 55.0% | |
GTCATGCGATCCACACGCAA+TGG | + | chr7.1:2448158-2448177 | MS.gene066540:CDS | 55.0% | |
TGTACGGTTAAGCTCCGGCT+CGG | - | chr7.1:2447446-2447465 | None:intergenic | 55.0% | |
! | AACACCTCCCACGGCTTGTT+TGG | - | chr7.1:2444670-2444689 | None:intergenic | 55.0% |
AAGTGCAGCTCGCCTCTCCA+AGG | - | chr7.1:2446591-2446610 | None:intergenic | 60.0% | |
CTGAGGAGACGGTTGCTGCA+AGG | + | chr7.1:2447525-2447544 | MS.gene066540:CDS | 60.0% | |
!! | GGTTAAGCTCCGGCTCGGTT+TGG | - | chr7.1:2447441-2447460 | None:intergenic | 60.0% |
GGAGCCAAACAAGCCGTGGG+AGG | + | chr7.1:2444663-2444682 | MS.gene066540:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 2444636 | 2450179 | 2444636 | ID=MS.gene066540 |
chr7.1 | mRNA | 2444636 | 2450179 | 2444636 | ID=MS.gene066540.t1;Parent=MS.gene066540 |
chr7.1 | exon | 2444636 | 2444782 | 2444636 | ID=MS.gene066540.t1.exon1;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2444636 | 2444782 | 2444636 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2445735 | 2445782 | 2445735 | ID=MS.gene066540.t1.exon2;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2445735 | 2445782 | 2445735 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2445933 | 2446081 | 2445933 | ID=MS.gene066540.t1.exon3;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2445933 | 2446081 | 2445933 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2446235 | 2446283 | 2446235 | ID=MS.gene066540.t1.exon4;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2446235 | 2446283 | 2446235 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2446562 | 2446618 | 2446562 | ID=MS.gene066540.t1.exon5;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2446562 | 2446618 | 2446562 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2447431 | 2447610 | 2447431 | ID=MS.gene066540.t1.exon6;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2447431 | 2447610 | 2447431 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2447690 | 2447824 | 2447690 | ID=MS.gene066540.t1.exon7;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2447690 | 2447824 | 2447690 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2447920 | 2447981 | 2447920 | ID=MS.gene066540.t1.exon8;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2447920 | 2447981 | 2447920 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2448094 | 2448190 | 2448094 | ID=MS.gene066540.t1.exon9;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2448094 | 2448190 | 2448094 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2448281 | 2448395 | 2448281 | ID=MS.gene066540.t1.exon10;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2448281 | 2448395 | 2448281 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2448483 | 2448559 | 2448483 | ID=MS.gene066540.t1.exon11;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2448483 | 2448559 | 2448483 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2448747 | 2448884 | 2448747 | ID=MS.gene066540.t1.exon12;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2448747 | 2448884 | 2448747 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2449161 | 2449328 | 2449161 | ID=MS.gene066540.t1.exon13;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2449161 | 2449328 | 2449161 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2449588 | 2449701 | 2449588 | ID=MS.gene066540.t1.exon14;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2449588 | 2449701 | 2449588 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2449806 | 2449902 | 2449806 | ID=MS.gene066540.t1.exon15;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2449806 | 2449902 | 2449806 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
chr7.1 | exon | 2450055 | 2450179 | 2450055 | ID=MS.gene066540.t1.exon16;Parent=MS.gene066540.t1 |
chr7.1 | CDS | 2450055 | 2450179 | 2450055 | ID=cds.MS.gene066540.t1;Parent=MS.gene066540.t1 |
Gene Sequence |
Protein sequence |