Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066545.t1 | XP_003626362.1 | 91 | 156 | 3 | 1 | 1 | 156 | 1 | 145 | 2.70E-74 | 288.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066545.t1 | Q02610 | 85.3 | 156 | 12 | 1 | 1 | 156 | 1 | 145 | 6.3e-72 | 271.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066545.t1 | B7FGV9 | 91.0 | 156 | 3 | 1 | 1 | 156 | 1 | 145 | 1.9e-74 | 288.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011492 | MS.gene066545 | PPI |
| MS.gene71901 | MS.gene066545 | PPI |
| MS.gene62862 | MS.gene066545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066545.t1 | MTR_7g114240 | 91.026 | 156 | 3 | 1 | 1 | 156 | 1 | 145 | 3.45e-97 | 278 |
| MS.gene066545.t1 | MTR_7g114240 | 86.842 | 114 | 4 | 1 | 1 | 114 | 1 | 103 | 2.90e-65 | 196 |
| MS.gene066545.t1 | MTR_6g029200 | 64.516 | 155 | 45 | 1 | 2 | 156 | 8 | 152 | 7.26e-65 | 196 |
| MS.gene066545.t1 | MTR_4g057240 | 64.189 | 148 | 41 | 2 | 9 | 156 | 63 | 198 | 2.40e-61 | 189 |
| MS.gene066545.t1 | MTR_6g029200 | 75.424 | 118 | 29 | 0 | 39 | 156 | 25 | 142 | 3.68e-60 | 184 |
| MS.gene066545.t1 | MTR_4g101820 | 38.298 | 94 | 50 | 2 | 41 | 134 | 182 | 267 | 2.07e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066545.t1 | AT1G08830 | 76.923 | 156 | 25 | 1 | 1 | 156 | 1 | 145 | 9.63e-81 | 236 |
| MS.gene066545.t1 | AT1G08830 | 76.923 | 156 | 25 | 1 | 1 | 156 | 1 | 145 | 9.63e-81 | 236 |
| MS.gene066545.t1 | AT2G28190 | 63.636 | 154 | 45 | 1 | 3 | 156 | 66 | 208 | 1.93e-64 | 197 |
| MS.gene066545.t1 | AT5G18100 | 58.710 | 155 | 53 | 1 | 2 | 156 | 8 | 151 | 1.69e-59 | 183 |
| MS.gene066545.t1 | AT5G18100 | 56.522 | 138 | 49 | 1 | 2 | 139 | 8 | 134 | 2.77e-49 | 156 |
Find 59 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGACATGCTGGTGATTT+AGG | 0.204339 | 7.1:-2392870 | MS.gene066545:CDS |
| GGCTTCCATATCCATGCCTT+GGG | 0.292332 | 7.1:-2393250 | MS.gene066545:CDS |
| ACTGTGACCGGAAATCTTTC+TGG | 0.298064 | 7.1:-2393292 | MS.gene066545:CDS |
| GCCCTTCCTATGATTGAGTT+TGG | 0.330134 | 7.1:+2392343 | None:intergenic |
| CTTAAGACCAGAAAGATTTC+CGG | 0.340182 | 7.1:+2393285 | None:intergenic |
| GCACCGTGCTCCTTACCATT+AGG | 0.399615 | 7.1:+2392906 | None:intergenic |
| TGGTAAGTTTCAACAGCCTT+TGG | 0.402756 | 7.1:-2393402 | MS.gene066545:CDS |
| GTGAAGGCTGTGGCAGTTCT+TGG | 0.413587 | 7.1:-2393473 | MS.gene066545:CDS |
| GGTCTTAAGCCTGGCCTCCA+TGG | 0.414866 | 7.1:-2393271 | MS.gene066545:CDS |
| TGGCTTCCATATCCATGCCT+TGG | 0.423080 | 7.1:-2393251 | MS.gene066545:CDS |
| ACTGGACCAAACTCAATCAT+AGG | 0.429060 | 7.1:-2392349 | MS.gene066545:CDS |
| GCATGTCGAATCTCATCCTC+AGG | 0.433796 | 7.1:+2392882 | None:intergenic |
| CTTCACCATTACTGACAATC+AGG | 0.444656 | 7.1:-2392683 | MS.gene066545:intron |
| ACAAATGGTTGCATGTCAAC+TGG | 0.450246 | 7.1:-2393220 | MS.gene066545:intron |
| GGACCACATTTCAATCCTAA+TGG | 0.461674 | 7.1:-2392921 | MS.gene066545:CDS |
| GTACCTTTCCCAAGATCATC+AGG | 0.463574 | 7.1:+2392301 | None:intergenic |
| CATGCCGATCCTGATGATCT+TGG | 0.469419 | 7.1:-2392310 | MS.gene066545:CDS |
| AGCTTCTCTCAGGAGGGAAA+TGG | 0.473090 | 7.1:-2393422 | MS.gene066545:CDS |
| ATGCCGATCCTGATGATCTT+GGG | 0.478164 | 7.1:-2392309 | MS.gene066545:CDS |
| AATGTCACTGTCGGCGATGA+TGG | 0.482153 | 7.1:-2392846 | MS.gene066545:intron |
| TGGTACTATTAGCTTCTCTC+AGG | 0.486454 | 7.1:-2393432 | MS.gene066545:CDS |
| AGTTGACATGCAACCATTTG+TGG | 0.493212 | 7.1:+2393222 | None:intergenic |
| AATCTTTCTGGTCTTAAGCC+TGG | 0.494092 | 7.1:-2393280 | MS.gene066545:CDS |
| AGATTTCCGGTCACAGTGGT+TGG | 0.506019 | 7.1:+2393298 | None:intergenic |
| CATGAGCTTAGCAAGACTAC+TGG | 0.517405 | 7.1:-2391982 | MS.gene066545:CDS |
| ATATGGAAGCCATGGAGGCC+AGG | 0.527324 | 7.1:+2393262 | None:intergenic |
| AGGCATGGATATGGAAGCCA+TGG | 0.529289 | 7.1:+2393254 | None:intergenic |
| AGCAAGACTACTGGAAATGC+TGG | 0.533538 | 7.1:-2391973 | MS.gene066545:CDS |
| GCAGGTCCAACCACTGTGAC+CGG | 0.534164 | 7.1:-2393304 | MS.gene066545:intron |
| GTGAGAAGTTCTGACAATCA+TGG | 0.540997 | 7.1:-2391805 | MS.gene066545:CDS |
| TGTTCACAGATCCCTCTCAC+TGG | 0.549506 | 7.1:-2392367 | MS.gene066545:intron |
| GGTAACAGTAATGATGTCTC+TGG | 0.553348 | 7.1:-2393452 | MS.gene066545:CDS |
| ACATTTCAATCCTAATGGTA+AGG | 0.554760 | 7.1:-2392916 | MS.gene066545:CDS |
| TACTATTAGCTTCTCTCAGG+AGG | 0.557121 | 7.1:-2393429 | MS.gene066545:CDS |
| GACCAAACTCAATCATAGGA+AGG | 0.559020 | 7.1:-2392345 | MS.gene066545:CDS |
| GTCAGTAATGGTGAAGCTTG+CGG | 0.567650 | 7.1:+2392690 | None:intergenic |
| ATTGAGTTTGGTCCAGTGAG+AGG | 0.575707 | 7.1:+2392355 | None:intergenic |
| TTGAGTTTGGTCCAGTGAGA+GGG | 0.579337 | 7.1:+2392356 | None:intergenic |
| GATTTAGGAAATGTCACTGT+CGG | 0.580192 | 7.1:-2392855 | MS.gene066545:CDS |
| TTGAACAATGGTGAAGGCTG+TGG | 0.590785 | 7.1:-2393483 | None:intergenic |
| ACATACCTGATTGTCAGTAA+TGG | 0.594183 | 7.1:+2392678 | None:intergenic |
| GAGGATGAGATTCGACATGC+TGG | 0.598972 | 7.1:-2392879 | MS.gene066545:CDS |
| ATCACATTGAACAATGGTGA+AGG | 0.610273 | 7.1:-2393489 | None:intergenic |
| GATCCTGATGATCTTGGGAA+AGG | 0.612525 | 7.1:-2392304 | MS.gene066545:intron |
| GCTTCCATATCCATGCCTTG+GGG | 0.616548 | 7.1:-2393249 | MS.gene066545:CDS |
| TTACTCTTCGCGGAGACCAA+AGG | 0.617471 | 7.1:+2393386 | None:intergenic |
| AATCCTAATGGTAAGGAGCA+CGG | 0.625283 | 7.1:-2392909 | MS.gene066545:CDS |
| ACCAAACTCAATCATAGGAA+GGG | 0.632037 | 7.1:-2392344 | MS.gene066545:CDS |
| CATGGATATGGAAGCCATGG+AGG | 0.632624 | 7.1:+2393257 | None:intergenic |
| ACTATTAGCTTCTCTCAGGA+GGG | 0.637590 | 7.1:-2393428 | MS.gene066545:CDS |
| CATGTCGAATCTCATCCTCA+GGG | 0.638518 | 7.1:+2392883 | None:intergenic |
| TTTCCCAAGATCATCAGGAT+CGG | 0.641905 | 7.1:+2392306 | None:intergenic |
| TTACCATTAGGATTGAAATG+TGG | 0.656736 | 7.1:+2392918 | None:intergenic |
| CTTCCATATCCATGCCTTGG+GGG | 0.658207 | 7.1:-2393248 | MS.gene066545:CDS |
| TAAGGAGCACGGTGCCCCTG+AGG | 0.679963 | 7.1:-2392898 | MS.gene066545:CDS |
| AAGACTACTGGAAATGCTGG+TGG | 0.685336 | 7.1:-2391970 | MS.gene066545:CDS |
| AGAAAGATTTCCGGTCACAG+TGG | 0.704388 | 7.1:+2393294 | None:intergenic |
| ATGTCGAATCTCATCCTCAG+GGG | 0.738664 | 7.1:+2392884 | None:intergenic |
| GCTGGTGGCAGAGTAGCTTG+TGG | 0.784017 | 7.1:-2391955 | MS.gene066545:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAAATAAAATCAAG+TGG | + | chr7.1:2392487-2392506 | None:intergenic | 15.0% |
| !! | ATTTCTAATGAATTATTCTA+GGG | - | chr7.1:2392642-2392661 | MS.gene066545:intron | 15.0% |
| !! | TAACCTATAAAACATATAAA+AGG | + | chr7.1:2392209-2392228 | None:intergenic | 15.0% |
| !!! | GTTTGATTTTAACTTTAAAA+TGG | - | chr7.1:2392532-2392551 | MS.gene066545:intron | 15.0% |
| !!! | TATCCTTTTATATGTTTTAT+AGG | - | chr7.1:2392203-2392222 | MS.gene066545:intron | 15.0% |
| !! | ATTATTCTAAATTGACAACA+AGG | - | chr7.1:2392848-2392867 | MS.gene066545:CDS | 20.0% |
| !! | CATTTCTAATGAATTATTCT+AGG | - | chr7.1:2392641-2392660 | MS.gene066545:intron | 20.0% |
| !! | TTAAATAAATAATAGAAGCG+CGG | + | chr7.1:2392291-2392310 | None:intergenic | 20.0% |
| !!! | AAGAAAATGTTTCCATTTTT+GGG | + | chr7.1:2392706-2392725 | None:intergenic | 20.0% |
| !!! | GATTTTATTTTTTTTGTGAC+CGG | - | chr7.1:2392490-2392509 | MS.gene066545:intron | 20.0% |
| !!! | GTTTCATTTTTAATATCTTG+AGG | - | chr7.1:2392096-2392115 | MS.gene066545:intron | 20.0% |
| !!! | TAAGAAAATGTTTCCATTTT+TGG | + | chr7.1:2392707-2392726 | None:intergenic | 20.0% |
| !!! | TGTTGTCAATTTAGAATAAT+GGG | + | chr7.1:2392848-2392867 | None:intergenic | 20.0% |
| !!! | TTGTTGTCAATTTAGAATAA+TGG | + | chr7.1:2392849-2392868 | None:intergenic | 20.0% |
| ! | ATGAAACAAATTATTGTCCA+AGG | + | chr7.1:2392083-2392102 | None:intergenic | 25.0% |
| !! | CTTTTGAATCTGTTTAATAC+AGG | - | chr7.1:2392329-2392348 | MS.gene066545:CDS | 25.0% |
| !! | TTTTGCATAACATTTCATCT+CGG | - | chr7.1:2393248-2393267 | MS.gene066545:CDS | 25.0% |
| !!! | AACCTTAATTTTTTGCATCA+CGG | + | chr7.1:2393409-2393428 | None:intergenic | 25.0% |
| !!! | AAGCACATTTTAAAGATAAC+CGG | + | chr7.1:2392512-2392531 | None:intergenic | 25.0% |
| !!! | TTTTAGTTATCTTCTTTTCC+AGG | - | chr7.1:2392461-2392480 | MS.gene066545:intron | 25.0% |
| !!! | TTTTTTAAACATTGACTGTG+CGG | - | chr7.1:2393370-2393389 | MS.gene066545:intron | 25.0% |
| AAAAATAAAATCAAGTGGCC+TGG | + | chr7.1:2392482-2392501 | None:intergenic | 30.0% | |
| AAACAAAAACTTACTCTTCG+CGG | + | chr7.1:2391898-2391917 | None:intergenic | 30.0% | |
| AACTTCCCTCAACAATAAAT+GGG | + | chr7.1:2393029-2393048 | None:intergenic | 30.0% | |
| AAGGTTCAAATGATCTTTAG+AGG | - | chr7.1:2393423-2393442 | MS.gene066545:CDS | 30.0% | |
| AATTGTCCCATTTATTGTTG+AGG | - | chr7.1:2393020-2393039 | MS.gene066545:intron | 30.0% | |
| ACATTTCAATCCTAATGGTA+AGG | - | chr7.1:2392355-2392374 | MS.gene066545:CDS | 30.0% | |
| AGATTCATTCAAGCAAATTG+AGG | + | chr7.1:2392156-2392175 | None:intergenic | 30.0% | |
| ATTGTCCCATTTATTGTTGA+GGG | - | chr7.1:2393021-2393040 | MS.gene066545:intron | 30.0% | |
| ATTTGTGACGATCACTTTAT+AGG | + | chr7.1:2393114-2393133 | None:intergenic | 30.0% | |
| GATTAAAAGTTGAAACTCTC+AGG | + | chr7.1:2392874-2392893 | None:intergenic | 30.0% | |
| GATTCATTCAAGCAAATTGA+GGG | + | chr7.1:2392155-2392174 | None:intergenic | 30.0% | |
| GCAATACATGTTAATCGATT+TGG | + | chr7.1:2391940-2391959 | None:intergenic | 30.0% | |
| TAACTTCCCTCAACAATAAA+TGG | + | chr7.1:2393030-2393049 | None:intergenic | 30.0% | |
| TTACCATTAGGATTGAAATG+TGG | + | chr7.1:2392356-2392375 | None:intergenic | 30.0% | |
| TTGCTTGAATGAATCTAAAG+TGG | - | chr7.1:2392160-2392179 | MS.gene066545:intron | 30.0% | |
| !! | AACTTTAAAATGGTTTCCTC+TGG | - | chr7.1:2392542-2392561 | MS.gene066545:intron | 30.0% |
| !! | TTGGAAACACTTTTTGTGTT+TGG | - | chr7.1:2393060-2393079 | MS.gene066545:intron | 30.0% |
| AACACAATTCATTCTCGACT+TGG | + | chr7.1:2392246-2392265 | None:intergenic | 35.0% | |
| AAGTGATCGTCACAAATTCA+AGG | - | chr7.1:2393117-2393136 | MS.gene066545:intron | 35.0% | |
| ACATACCTGATTGTCAGTAA+TGG | + | chr7.1:2392596-2392615 | None:intergenic | 35.0% | |
| ACCAAACTCAATCATAGGAA+GGG | - | chr7.1:2392927-2392946 | MS.gene066545:intron | 35.0% | |
| AGTGATCGTCACAAATTCAA+GGG | - | chr7.1:2393118-2393137 | MS.gene066545:intron | 35.0% | |
| CATGTTAAGCAACCCAAAAA+TGG | - | chr7.1:2392691-2392710 | MS.gene066545:CDS | 35.0% | |
| CTTAAGACCAGAAAGATTTC+CGG | + | chr7.1:2391989-2392008 | None:intergenic | 35.0% | |
| GACTGTGCGGTATAAAAAAA+AGG | - | chr7.1:2393383-2393402 | MS.gene066545:intron | 35.0% | |
| GATTTAGGAAATGTCACTGT+CGG | - | chr7.1:2392416-2392435 | MS.gene066545:intron | 35.0% | |
| TGTCATATTATGCTAGAGCT+AGG | + | chr7.1:2393173-2393192 | None:intergenic | 35.0% | |
| ! | GGGAAGTTAACACAATCTTT+TGG | - | chr7.1:2393041-2393060 | MS.gene066545:intron | 35.0% |
| !! | AATCATTAACTTGTGCCTTG+AGG | - | chr7.1:2392806-2392825 | MS.gene066545:intron | 35.0% |
| !! | ATCATTAACTTGTGCCTTGA+GGG | - | chr7.1:2392807-2392826 | MS.gene066545:intron | 35.0% |
| AATCCTAATGGTAAGGAGCA+CGG | - | chr7.1:2392362-2392381 | MS.gene066545:intron | 40.0% | |
| ACAAATGGTTGCATGTCAAC+TGG | - | chr7.1:2392051-2392070 | MS.gene066545:intron | 40.0% | |
| ACATGTATTGCGAATTGTGC+AGG | - | chr7.1:2391949-2391968 | MS.gene066545:intron | 40.0% | |
| ACTGGACCAAACTCAATCAT+AGG | - | chr7.1:2392922-2392941 | MS.gene066545:CDS | 40.0% | |
| AGGCACTATTGAGTATGAGT+CGG | - | chr7.1:2392116-2392135 | MS.gene066545:intron | 40.0% | |
| AGTTGACATGCAACCATTTG+TGG | + | chr7.1:2392052-2392071 | None:intergenic | 40.0% | |
| ATGTCAACTGGTAAAGTCCT+TGG | - | chr7.1:2392063-2392082 | MS.gene066545:intron | 40.0% | |
| ATTCGACATGCTGGTGATTT+AGG | - | chr7.1:2392401-2392420 | MS.gene066545:intron | 40.0% | |
| CTTCACCATTACTGACAATC+AGG | - | chr7.1:2392588-2392607 | MS.gene066545:intron | 40.0% | |
| GACCAAACTCAATCATAGGA+AGG | - | chr7.1:2392926-2392945 | MS.gene066545:intron | 40.0% | |
| GGACCACATTTCAATCCTAA+TGG | - | chr7.1:2392350-2392369 | MS.gene066545:CDS | 40.0% | |
| GGCCGTGATGCAAAAAATTA+AGG | - | chr7.1:2393404-2393423 | MS.gene066545:CDS | 40.0% | |
| GGTAACAGTAATGATGTCTC+TGG | - | chr7.1:2391819-2391838 | MS.gene066545:CDS | 40.0% | |
| TGGTAAGTTTCAACAGCCTT+TGG | - | chr7.1:2391869-2391888 | MS.gene066545:intron | 40.0% | |
| TTGCTTAACATGTGCCCTAA+GGG | + | chr7.1:2392683-2392702 | None:intergenic | 40.0% | |
| TTTCCCAAGATCATCAGGAT+CGG | + | chr7.1:2392968-2392987 | None:intergenic | 40.0% | |
| ! | ACTATTAGCTTCTCTCAGGA+GGG | - | chr7.1:2391843-2391862 | MS.gene066545:intron | 40.0% |
| ! | GTGAGAAGTTCTGACAATCA+TGG | - | chr7.1:2393466-2393485 | MS.gene066545:CDS | 40.0% |
| ! | TACTATTAGCTTCTCTCAGG+AGG | - | chr7.1:2391842-2391861 | MS.gene066545:intron | 40.0% |
| ! | TGGTACTATTAGCTTCTCTC+AGG | - | chr7.1:2391839-2391858 | MS.gene066545:intron | 40.0% |
| !! | AATCTTTCTGGTCTTAAGCC+TGG | - | chr7.1:2391991-2392010 | MS.gene066545:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr7.1:2392824-2392843 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTTA+GGG | - | chr7.1:2392666-2392685 | MS.gene066545:intron | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | chr7.1:2392665-2392684 | MS.gene066545:intron | 40.0% |
| AAGACTACTGGAAATGCTGG+TGG | - | chr7.1:2393301-2393320 | MS.gene066545:CDS | 45.0% | |
| ACTGTGACCGGAAATCTTTC+TGG | - | chr7.1:2391979-2391998 | MS.gene066545:CDS | 45.0% | |
| AGAAAGATTTCCGGTCACAG+TGG | + | chr7.1:2391980-2391999 | None:intergenic | 45.0% | |
| AGCAAGACTACTGGAAATGC+TGG | - | chr7.1:2393298-2393317 | MS.gene066545:CDS | 45.0% | |
| ATGCCGATCCTGATGATCTT+GGG | - | chr7.1:2392962-2392981 | MS.gene066545:intron | 45.0% | |
| ATGTCGAATCTCATCCTCAG+GGG | + | chr7.1:2392390-2392409 | None:intergenic | 45.0% | |
| ATTGAGTTTGGTCCAGTGAG+AGG | + | chr7.1:2392919-2392938 | None:intergenic | 45.0% | |
| CATGAGCTTAGCAAGACTAC+TGG | - | chr7.1:2393289-2393308 | MS.gene066545:CDS | 45.0% | |
| CATGTCGAATCTCATCCTCA+GGG | + | chr7.1:2392391-2392410 | None:intergenic | 45.0% | |
| GATCCTGATGATCTTGGGAA+AGG | - | chr7.1:2392967-2392986 | MS.gene066545:intron | 45.0% | |
| GCCCTTCCTATGATTGAGTT+TGG | + | chr7.1:2392931-2392950 | None:intergenic | 45.0% | |
| GGCACTATTGAGTATGAGTC+GGG | - | chr7.1:2392117-2392136 | MS.gene066545:intron | 45.0% | |
| GTACCTTTCCCAAGATCATC+AGG | + | chr7.1:2392973-2392992 | None:intergenic | 45.0% | |
| GTCAGTAATGGTGAAGCTTG+CGG | + | chr7.1:2392584-2392603 | None:intergenic | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | + | chr7.1:2392684-2392703 | None:intergenic | 45.0% | |
| TCATCTCGGTACTGCTGTAT+AGG | - | chr7.1:2393262-2393281 | MS.gene066545:CDS | 45.0% | |
| TTCCTCTGGTTGTGTAACTC+AGG | - | chr7.1:2392556-2392575 | MS.gene066545:intron | 45.0% | |
| TTCCTGAGTTACACAACCAG+AGG | + | chr7.1:2392561-2392580 | None:intergenic | 45.0% | |
| TTGAGTTTGGTCCAGTGAGA+GGG | + | chr7.1:2392918-2392937 | None:intergenic | 45.0% | |
| AATGTCACTGTCGGCGATGA+TGG | - | chr7.1:2392425-2392444 | MS.gene066545:intron | 50.0% | |
| AGATTTCCGGTCACAGTGGT+TGG | + | chr7.1:2391976-2391995 | None:intergenic | 50.0% | |
| AGCTTCTCTCAGGAGGGAAA+TGG | - | chr7.1:2391849-2391868 | MS.gene066545:intron | 50.0% | |
| AGGCATGGATATGGAAGCCA+TGG | + | chr7.1:2392020-2392039 | None:intergenic | 50.0% | |
| CATGCCGATCCTGATGATCT+TGG | - | chr7.1:2392961-2392980 | MS.gene066545:intron | 50.0% | |
| CATGGATATGGAAGCCATGG+AGG | + | chr7.1:2392017-2392036 | None:intergenic | 50.0% | |
| CTTCCATATCCATGCCTTGG+GGG | - | chr7.1:2392023-2392042 | MS.gene066545:intron | 50.0% | |
| GAGGATGAGATTCGACATGC+TGG | - | chr7.1:2392392-2392411 | MS.gene066545:intron | 50.0% | |
| GCATGTCGAATCTCATCCTC+AGG | + | chr7.1:2392392-2392411 | None:intergenic | 50.0% | |
| GCTTCCATATCCATGCCTTG+GGG | - | chr7.1:2392022-2392041 | MS.gene066545:intron | 50.0% | |
| GGCTTCCATATCCATGCCTT+GGG | - | chr7.1:2392021-2392040 | MS.gene066545:intron | 50.0% | |
| TCTCGGTACTGCTGTATAGG+TGG | - | chr7.1:2393265-2393284 | MS.gene066545:CDS | 50.0% | |
| TGGCTTCCATATCCATGCCT+TGG | - | chr7.1:2392020-2392039 | MS.gene066545:intron | 50.0% | |
| TGTTCACAGATCCCTCTCAC+TGG | - | chr7.1:2392904-2392923 | MS.gene066545:CDS | 50.0% | |
| TTACTCTTCGCGGAGACCAA+AGG | + | chr7.1:2391888-2391907 | None:intergenic | 50.0% | |
| ACCATTTGTGGTGTCCCCCA+AGG | + | chr7.1:2392040-2392059 | None:intergenic | 55.0% | |
| ATATGGAAGCCATGGAGGCC+AGG | + | chr7.1:2392012-2392031 | None:intergenic | 55.0% | |
| GCACCGTGCTCCTTACCATT+AGG | + | chr7.1:2392368-2392387 | None:intergenic | 55.0% | |
| GTGAAGGCTGTGGCAGTTCT+TGG | - | chr7.1:2391798-2391817 | MS.gene066545:CDS | 55.0% | |
| TGTCCCCCAAGGCATGGATA+TGG | + | chr7.1:2392029-2392048 | None:intergenic | 55.0% | |
| ! | CACTGTCGGCGATGATGGTA+TGG | - | chr7.1:2392430-2392449 | MS.gene066545:intron | 55.0% |
| GCAGGTCCAACCACTGTGAC+CGG | - | chr7.1:2391967-2391986 | MS.gene066545:CDS | 60.0% | |
| GCCTTGGGGGACACCACAAA+TGG | - | chr7.1:2392036-2392055 | MS.gene066545:intron | 60.0% | |
| GCTGGTGGCAGAGTAGCTTG+TGG | - | chr7.1:2393316-2393335 | MS.gene066545:intron | 60.0% | |
| GGTCTTAAGCCTGGCCTCCA+TGG | - | chr7.1:2392000-2392019 | MS.gene066545:intron | 60.0% | |
| TTGTGGTGTCCCCCAAGGCA+TGG | + | chr7.1:2392035-2392054 | None:intergenic | 60.0% | |
| ! | TAAGGAGCACGGTGCCCCTG+AGG | - | chr7.1:2392373-2392392 | MS.gene066545:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2391795 | 2393498 | 2391795 | ID=MS.gene066545 |
| chr7.1 | mRNA | 2391795 | 2393498 | 2391795 | ID=MS.gene066545.t1;Parent=MS.gene066545 |
| chr7.1 | exon | 2393390 | 2393498 | 2393390 | ID=MS.gene066545.t1.exon1;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2393390 | 2393498 | 2393390 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2393221 | 2393322 | 2393221 | ID=MS.gene066545.t1.exon2;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2393221 | 2393322 | 2393221 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2392847 | 2392942 | 2392847 | ID=MS.gene066545.t1.exon3;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2392847 | 2392942 | 2392847 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2392684 | 2392715 | 2392684 | ID=MS.gene066545.t1.exon4;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2392684 | 2392715 | 2392684 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2392305 | 2392380 | 2392305 | ID=MS.gene066545.t1.exon5;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2392305 | 2392380 | 2392305 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2391956 | 2392009 | 2391956 | ID=MS.gene066545.t1.exon6;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2391956 | 2392009 | 2391956 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| chr7.1 | exon | 2391795 | 2391850 | 2391795 | ID=MS.gene066545.t1.exon7;Parent=MS.gene066545.t1 |
| chr7.1 | CDS | 2391795 | 2391850 | 2391795 | ID=cds.MS.gene066545.t1;Parent=MS.gene066545.t1 |
| Gene Sequence |
| Protein sequence |
