AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066611

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066611.t1 MTR_4g023590 97.001 1267 35 2 8 1273 1 1265 0.0 2538
MS.gene066611.t1 MTR_4g120070 92.214 989 45 3 316 1273 203 1190 0.0 1867
MS.gene066611.t1 MTR_3g070430 58.442 308 95 7 617 915 76 359 1.91e-91 305
MS.gene066611.t1 MTR_3g070430 43.038 158 62 5 979 1129 347 483 2.97e-24 108
MS.gene066611.t1 MTR_3g070430 43.617 94 26 3 422 511 1 71 1.55e-13 75.1
MS.gene066611.t1 MTR_1g086640 41.544 272 132 5 273 544 49 293 2.81e-57 213
MS.gene066611.t1 MTR_1g086640 26.694 487 257 10 687 1164 290 685 1.50e-39 158
MS.gene066611.t1 MTR_2g098440 40.433 277 132 4 274 550 564 807 5.46e-57 217
MS.gene066611.t1 MTR_2g098440 26.981 467 241 7 700 1162 817 1187 3.56e-42 169
MS.gene066611.t1 MTR_1g023985 42.007 269 123 5 274 542 563 798 3.79e-56 214
MS.gene066611.t1 MTR_1g023985 28.817 465 237 8 700 1164 812 1182 1.64e-43 173
MS.gene066611.t1 MTR_3g054400 39.711 277 134 4 274 550 361 604 5.42e-56 213
MS.gene066611.t1 MTR_3g054400 27.409 467 239 7 700 1162 614 984 1.37e-43 173
MS.gene066611.t1 MTR_3g023880 41.445 263 121 5 274 536 405 634 1.95e-55 211
MS.gene066611.t1 MTR_3g023880 30.323 465 232 10 700 1164 654 1026 1.30e-44 176
MS.gene066611.t1 MTR_7g095080 38.776 294 152 6 270 544 37 321 3.76e-55 206
MS.gene066611.t1 MTR_7g095080 26.543 486 256 14 687 1164 325 717 8.99e-33 137
MS.gene066611.t1 MTR_5g075310 39.630 270 131 5 274 543 202 439 1.59e-53 202
MS.gene066611.t1 MTR_5g075310 48.921 139 70 1 700 838 452 589 3.66e-32 135
MS.gene066611.t1 MTR_6g061840 40.684 263 124 6 274 536 247 477 3.04e-53 197
MS.gene066611.t1 MTR_6g061840 56.180 89 39 0 700 788 497 585 1.62e-21 100
MS.gene066611.t1 MTR_8g080240 41.603 262 118 4 281 542 4 230 3.95e-53 197
MS.gene066611.t1 MTR_8g080240 28.721 383 213 7 701 1081 246 570 3.60e-37 149
MS.gene066611.t1 MTR_8g080240 41.603 262 118 4 281 542 4 230 1.13e-52 198
MS.gene066611.t1 MTR_8g080240 26.981 467 255 10 701 1161 246 632 2.08e-40 160
MS.gene066611.t1 MTR_8g080240 41.603 262 118 4 281 542 4 230 1.52e-52 197
MS.gene066611.t1 MTR_8g080240 26.981 467 255 10 701 1161 246 632 2.17e-40 160
MS.gene066611.t1 MTR_6g061840 40.684 263 124 6 274 536 247 477 3.99e-52 197
MS.gene066611.t1 MTR_6g061840 44.221 199 106 2 700 896 497 692 1.03e-38 156
MS.gene066611.t1 MTR_6g061840 40.684 263 124 6 274 536 247 477 1.55e-51 197
MS.gene066611.t1 MTR_6g061840 29.122 467 237 10 700 1164 497 871 9.15e-43 170
MS.gene066611.t1 MTR_1g114490 42.188 256 115 5 292 547 512 734 3.09e-51 198
MS.gene066611.t1 MTR_1g114490 28.387 465 239 8 700 1164 743 1113 2.72e-43 172
MS.gene066611.t1 MTR_3g052610 37.838 296 131 5 273 542 46 314 5.26e-50 190
MS.gene066611.t1 MTR_3g052610 27.215 474 248 10 698 1164 326 709 1.66e-39 158
MS.gene066611.t1 MTR_2g015320 36.691 278 132 6 274 536 46 294 4.54e-47 181
MS.gene066611.t1 MTR_2g015320 28.000 475 250 9 691 1164 305 688 1.70e-42 167
MS.gene066611.t1 MTR_4g485610 41.379 232 109 3 311 542 49 253 9.50e-47 180
MS.gene066611.t1 MTR_4g485610 26.582 474 250 10 698 1164 265 647 1.14e-37 152
MS.gene066611.t1 MTR_8g041990 34.228 298 125 8 274 564 99 332 1.96e-38 154
MS.gene066611.t1 MTR_1543s0010 42.553 188 108 0 700 887 15 202 4.52e-35 136
MS.gene066611.t1 MTR_5g090430 29.348 368 197 9 677 1027 562 883 3.86e-34 143
MS.gene066611.t1 MTR_5g090430 30.870 230 118 5 278 496 184 383 1.80e-24 112
MS.gene066611.t1 MTR_5g090430 29.348 368 197 9 677 1027 449 770 3.89e-34 143
MS.gene066611.t1 MTR_5g090430 30.870 230 118 5 278 496 71 270 3.00e-24 111
MS.gene066611.t1 MTR_8g106630 27.586 406 224 10 700 1097 585 928 1.30e-32 138
MS.gene066611.t1 MTR_8g106630 33.871 248 128 7 272 513 261 478 7.08e-30 129
MS.gene066611.t1 MTR_1g109170 26.891 357 208 8 673 1022 612 922 3.87e-32 137
MS.gene066611.t1 MTR_1g109170 35.498 231 120 4 276 505 324 526 7.59e-32 135
MS.gene066611.t1 MTR_1g109170 26.891 357 208 8 673 1022 612 922 4.41e-32 136
MS.gene066611.t1 MTR_1g109170 35.498 231 120 4 276 505 324 526 8.50e-32 135
MS.gene066611.t1 MTR_3g014030 40.299 201 114 4 696 893 506 703 1.17e-31 135
MS.gene066611.t1 MTR_3g014030 29.210 291 150 7 274 546 256 508 1.05e-22 106
MS.gene066611.t1 MTR_0267s0070 39.801 201 115 4 696 893 1161 1358 1.11e-30 132
MS.gene066611.t1 MTR_0267s0070 29.658 263 130 7 301 546 939 1163 4.49e-18 91.3
MS.gene066611.t1 MTR_1g056490 35.714 224 116 5 273 496 223 418 2.06e-30 130
MS.gene066611.t1 MTR_1g056490 35.242 227 132 4 700 923 537 751 3.12e-27 120
MS.gene066611.t1 MTR_3g086770 39.062 192 112 3 703 891 513 702 1.40e-29 129
MS.gene066611.t1 MTR_3g086770 30.690 290 148 9 274 546 256 509 4.46e-21 101
MS.gene066611.t1 MTR_8g044260 31.353 303 174 8 217 513 180 454 1.91e-29 128
MS.gene066611.t1 MTR_8g044260 24.821 419 239 13 697 1102 557 912 1.49e-21 102
MS.gene066611.t1 MTR_8g045110 24.566 346 204 9 683 1018 128 426 1.95e-26 117
MS.gene066611.t1 MTR_4g094992 24.790 476 262 13 700 1164 121 511 2.34e-25 112
MS.gene066611.t1 MTR_4g134790 34.783 230 109 7 278 496 602 801 5.25e-25 114
MS.gene066611.t1 MTR_4g134790 25.806 341 225 6 685 1022 922 1237 9.29e-24 109
MS.gene066611.t1 MTR_4g134790 34.783 230 109 7 278 496 602 801 5.30e-25 114
MS.gene066611.t1 MTR_4g134790 25.806 341 225 6 685 1022 925 1240 9.30e-24 109
MS.gene066611.t1 MTR_1g088590 37.838 148 82 2 274 420 23 161 1.86e-22 105
MS.gene066611.t1 MTR_1g088590 38.554 83 51 0 721 803 323 405 1.42e-12 73.2
MS.gene066611.t1 MTR_3g055020 27.381 252 140 2 757 1008 48 256 2.94e-19 92.8
MS.gene066611.t1 MTR_3g070440 74.000 50 13 0 1100 1149 42 91 8.57e-19 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066611.t1 AT1G33390 51.558 1284 488 24 16 1268 6 1186 0.0 1158
MS.gene066611.t1 AT1G33390 51.558 1284 488 24 16 1268 6 1186 0.0 1158
MS.gene066611.t1 AT2G47250 41.544 272 132 4 273 544 57 301 3.52e-61 224
MS.gene066611.t1 AT2G47250 26.639 488 258 10 687 1165 298 694 7.60e-39 156
MS.gene066611.t1 AT3G62310 41.455 275 128 5 273 544 53 297 1.71e-60 218
MS.gene066611.t1 AT3G62310 38.235 238 138 3 687 915 294 531 5.20e-35 142
MS.gene066611.t1 AT3G62310 41.455 275 128 5 273 544 53 297 1.06e-59 216
MS.gene066611.t1 AT3G62310 40.284 211 117 3 687 888 294 504 1.01e-33 139
MS.gene066611.t1 AT3G62310 41.455 275 128 5 273 544 53 297 2.59e-59 219
MS.gene066611.t1 AT3G62310 26.489 487 258 10 687 1164 294 689 1.08e-39 159
MS.gene066611.t1 AT3G26560 43.123 269 120 5 274 542 508 743 1.20e-57 219
MS.gene066611.t1 AT3G26560 29.462 465 234 8 700 1164 757 1127 4.50e-45 178
MS.gene066611.t1 AT5G13010 40.072 277 133 4 274 550 551 794 1.48e-56 216
MS.gene066611.t1 AT5G13010 27.742 465 240 8 700 1162 804 1174 4.16e-43 172
MS.gene066611.t1 AT1G26370 39.130 322 160 7 241 540 2 309 1.03e-55 207
MS.gene066611.t1 AT1G26370 31.984 247 156 3 700 945 325 560 7.27e-29 125
MS.gene066611.t1 AT1G27900 39.850 266 122 5 280 542 3 233 8.61e-54 198
MS.gene066611.t1 AT1G27900 28.704 324 191 4 701 1022 249 534 2.44e-34 140
MS.gene066611.t1 AT1G27900 39.850 266 122 5 280 542 3 233 1.43e-53 198
MS.gene066611.t1 AT1G27900 28.916 332 195 5 701 1030 249 541 2.46e-34 140
MS.gene066611.t1 AT1G32490 40.530 264 124 5 273 536 386 616 1.80e-53 204
MS.gene066611.t1 AT1G32490 31.398 465 227 8 700 1164 636 1008 4.72e-51 197
MS.gene066611.t1 AT2G35340 40.741 270 127 5 274 543 397 633 1.86e-53 205
MS.gene066611.t1 AT2G35340 30.901 466 228 9 700 1164 646 1018 9.51e-49 190
MS.gene066611.t1 AT2G35340 40.741 270 127 5 274 543 259 495 1.93e-53 203
MS.gene066611.t1 AT2G35340 30.901 466 228 9 700 1164 508 880 5.80e-49 189
MS.gene066611.t1 AT1G32490 40.530 264 124 5 273 536 396 626 2.03e-53 204
MS.gene066611.t1 AT1G32490 31.398 465 227 8 700 1164 646 1018 5.14e-51 197
MS.gene066611.t1 AT1G27900 39.850 266 122 5 280 542 3 233 4.84e-53 199
MS.gene066611.t1 AT1G27900 27.468 466 254 12 701 1160 249 636 4.97e-38 153
MS.gene066611.t1 AT4G16680 39.630 270 130 5 275 544 209 445 5.25e-49 186
MS.gene066611.t1 AT4G16680 46.429 168 86 2 700 867 457 620 1.91e-33 139
MS.gene066611.t1 AT4G18465 36.491 285 135 7 274 542 41 295 1.08e-48 186
MS.gene066611.t1 AT4G18465 26.543 486 251 10 686 1164 296 682 5.08e-39 156
MS.gene066611.t1 AT4G16680 39.630 270 130 5 275 544 129 365 1.73e-48 187
MS.gene066611.t1 AT4G16680 30.687 466 228 13 700 1164 377 748 7.13e-43 169
MS.gene066611.t1 AT2G35920 28.111 434 255 9 625 1045 457 846 1.85e-36 150
MS.gene066611.t1 AT2G35920 34.703 219 115 5 278 496 225 415 1.02e-29 129
MS.gene066611.t1 AT2G35920 28.111 434 255 9 625 1045 489 878 2.27e-36 150
MS.gene066611.t1 AT2G35920 34.703 219 115 5 278 496 257 447 1.25e-29 128
MS.gene066611.t1 AT2G35920 28.111 434 255 9 625 1045 399 788 2.86e-36 149
MS.gene066611.t1 AT2G35920 34.703 219 115 5 278 496 167 357 1.35e-29 128
MS.gene066611.t1 AT5G04895 32.787 305 171 9 214 513 190 465 4.55e-33 140
MS.gene066611.t1 AT5G04895 25.234 428 247 9 677 1095 548 911 8.40e-24 109
MS.gene066611.t1 AT2G01130 35.565 239 125 5 276 513 150 360 2.21e-32 137
MS.gene066611.t1 AT2G01130 26.346 353 207 7 677 1022 442 748 5.91e-31 132
MS.gene066611.t1 AT2G01130 35.565 239 125 5 276 513 215 425 2.65e-32 137
MS.gene066611.t1 AT2G01130 26.346 353 207 7 677 1022 507 813 6.29e-31 132
MS.gene066611.t1 AT1G06670 29.213 356 191 8 677 1018 584 892 7.48e-32 136
MS.gene066611.t1 AT1G06670 31.897 232 116 5 273 496 209 406 4.26e-28 124
MS.gene066611.t1 AT1G06670 29.213 356 191 8 677 1018 584 892 8.74e-32 136
MS.gene066611.t1 AT1G06670 31.897 232 116 5 273 496 209 406 3.82e-28 124
MS.gene066611.t1 AT1G48650 34.146 246 130 7 272 513 287 504 4.24e-30 130
MS.gene066611.t1 AT1G48650 27.518 407 222 13 697 1094 607 949 1.07e-25 115
MS.gene066611.t1 AT1G48650 34.146 246 130 7 272 513 287 504 5.46e-30 130
MS.gene066611.t1 AT1G48650 27.027 407 224 12 697 1094 607 949 1.11e-25 115
MS.gene066611.t1 AT2G30800 27.684 354 199 8 677 1018 560 868 2.56e-28 124
MS.gene066611.t1 AT2G30800 31.330 233 117 6 273 496 179 377 1.51e-27 122
MS.gene066611.t1 AT2G30800 27.684 354 199 8 677 1018 217 525 2.87e-28 124
MS.gene066611.t1 AT1G58050 26.458 480 271 17 701 1157 915 1335 1.10e-27 122
MS.gene066611.t1 AT1G58050 34.583 240 121 7 278 509 594 805 1.05e-23 109
MS.gene066611.t1 AT5G10370 34.978 223 135 6 696 915 546 761 1.28e-27 122
MS.gene066611.t1 AT5G10370 31.119 286 156 6 266 542 291 544 6.32e-22 103
MS.gene066611.t1 AT4G01020 34.978 223 135 6 696 915 543 758 6.41e-27 120
MS.gene066611.t1 AT4G01020 30.769 286 157 7 266 542 288 541 1.79e-20 99.4
MS.gene066611.t1 AT1G58060 37.004 227 109 7 278 496 611 811 1.15e-24 112
MS.gene066611.t1 AT1G58060 31.004 229 144 4 697 922 944 1161 6.78e-24 110
MS.gene066611.t1 AT2G47680 41.844 141 72 2 281 420 26 157 1.38e-18 92.8
MS.gene066611.t1 AT2G47680 29.907 214 130 6 726 930 322 524 9.17e-16 83.6

Find 263 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGTACGCCCCGAGTTTC+TGG 0.082845 4.2:+79368097 MS.gene066611:CDS
CTACAGTTGTGCATGTTTAT+AGG 0.197331 4.2:+79364349 MS.gene066611:CDS
TTTGCAAAATACACTGTAAC+TGG 0.229461 4.2:-79365937 None:intergenic
CAATGATGAGCTCACACTTT+TGG 0.238838 4.2:+79367329 MS.gene066611:CDS
CATGAGCCTCATCAAGAATT+AGG 0.238856 4.2:-79365558 None:intergenic
CTCGTCTCCCCTTCTTTGTT+TGG 0.245505 4.2:-79368149 None:intergenic
CAACAGAAGATGGTCCTTTC+AGG 0.250418 4.2:+79365775 MS.gene066611:CDS
TAACTTACTTTAATGTCTTA+AGG 0.273561 4.2:-79363378 None:intergenic
AACAATATTGTGGATGTCTT+AGG 0.291095 4.2:+79366384 MS.gene066611:CDS
TCTCTCCTCAAAATAGTTTC+AGG 0.291431 4.2:-79368473 None:intergenic
AACTTACTTTAATGTCTTAA+GGG 0.295072 4.2:-79363377 None:intergenic
TCAGCGGTCTTCGAAGAAAT+TGG 0.298256 4.2:-79367990 None:intergenic
AAGTATAAGTCCTGATAAAA+TGG 0.310969 4.2:+79365801 MS.gene066611:CDS
CATGCTCGCAGTGGTATTAT+TGG 0.318747 4.2:+79364663 MS.gene066611:CDS
ACTTCTGTTTCTTATTTGAT+TGG 0.327887 4.2:-79363191 None:intergenic
TGTTGCATGGATGAACTTCT+AGG 0.334567 4.2:-79366222 None:intergenic
ATTAAGTATGTGGTTGATAC+TGG 0.335551 4.2:+79366696 MS.gene066611:CDS
CGAAGAAATTGGAATACGTT+TGG 0.339325 4.2:-79367979 None:intergenic
TCAGCCTGTGCATCATAAAA+TGG 0.340229 4.2:-79368278 None:intergenic
GAAACATCTTTAACAATTCC+AGG 0.346523 4.2:+79366672 MS.gene066611:CDS
ATATGTCTCCATGCCATTAG+AGG 0.349588 4.2:-79366745 None:intergenic
TCGTAACTCAAGTCTGCTTT+TGG 0.349867 4.2:+79367437 MS.gene066611:CDS
CCGAAGCTCGACATTGCTAA+TGG 0.356078 4.2:-79368369 None:intergenic
ATATACAACTACTGTTCCTT+TGG 0.357829 4.2:+79363853 MS.gene066611:CDS
CCCGTTTCCTACTTCTCTTA+AGG 0.363912 4.2:+79367251 MS.gene066611:CDS
TTTGCCTATGCTTTACTTGA+AGG 0.366412 4.2:+79368401 MS.gene066611:CDS
AAGAACTATGATTCCTCTAA+TGG 0.368105 4.2:+79366732 MS.gene066611:CDS
GCTCAACTTCGTGTATTTGA+TGG 0.370387 4.2:+79366603 MS.gene066611:CDS
CATGATGGAGCAAGAGATAA+TGG 0.372975 4.2:+79364413 MS.gene066611:CDS
CATTAGCAATGTCGAGCTTC+GGG 0.379895 4.2:+79368370 MS.gene066611:CDS
GCTGCTTTCGAAAACTTGTC+TGG 0.380595 4.2:+79366435 MS.gene066611:CDS
GCTCAACGTGCAGGCAGAGC+TGG 0.388835 4.2:+79366798 MS.gene066611:CDS
GAGTAGTTGCTGTCTAAGTT+TGG 0.390469 4.2:-79367778 None:intergenic
TGATGACCTGTCAGGGAAAC+AGG 0.392020 4.2:+79363721 MS.gene066611:CDS
ATTCACAAGAAGTTGCCATC+TGG 0.393732 4.2:+79366012 MS.gene066611:CDS
CTATGCTTTACTTGAAGGTC+AGG 0.394617 4.2:+79368406 MS.gene066611:CDS
GATTCATACGGTGCAGGTTA+AGG 0.396526 4.2:+79363778 MS.gene066611:CDS
TATTGCATTACAAAAGGATT+CGG 0.396698 4.2:-79367495 None:intergenic
TGTTGGGTCATCCCAACCTT+TGG 0.399525 4.2:+79368311 MS.gene066611:CDS
CAACAAACTGATAGGTTTAG+TGG 0.401677 4.2:+79366240 MS.gene066611:CDS
GAAGAACTTCTGATTTCATC+AGG 0.401739 4.2:-79363965 None:intergenic
CATCCATGCAACAAACTGAT+AGG 0.405096 4.2:+79366232 MS.gene066611:CDS
TATGTGCTGGCTGGGCAGAT+AGG 0.407849 4.2:+79367952 MS.gene066611:CDS
CAACCTTTGGACGCTTCTGT+TGG 0.415868 4.2:+79368324 MS.gene066611:CDS
TATCAGTTTCTTTATGAAGC+TGG 0.417637 4.2:+79364621 MS.gene066611:intron
CCATTAGCAATGTCGAGCTT+CGG 0.419896 4.2:+79368369 MS.gene066611:CDS
TCTATCAAGTTTATGACTGA+TGG 0.425847 4.2:+79364813 MS.gene066611:CDS
TCTTGCTCCATCATGACAAT+AGG 0.427301 4.2:-79364405 None:intergenic
CCTTCATATTGCATTACAAA+AGG 0.431738 4.2:-79367501 None:intergenic
TTCAGAAACAGAGAGTGAAT+TGG 0.431847 4.2:+79366314 MS.gene066611:CDS
TTCACAAGAAGTTGCCATCT+GGG 0.435779 4.2:+79366013 MS.gene066611:CDS
CAATATCCTGTTTCCCTGAC+AGG 0.436325 4.2:-79363727 None:intergenic
AACCTTTGGACGCTTCTGTT+GGG 0.437829 4.2:+79368325 MS.gene066611:CDS
GCTGTACATTTATTGAAAGA+AGG 0.439968 4.2:+79363674 MS.gene066611:CDS
TTTCTTTATGAAGCTGGCTA+TGG 0.440276 4.2:+79364627 MS.gene066611:CDS
GTCATCGTATGTGGAGAAAC+AGG 0.440459 4.2:+79364459 MS.gene066611:CDS
CGAGTGCAAGACTTCACATC+TGG 0.441687 4.2:+79365862 MS.gene066611:CDS
TGGAGACATATGAAGTGAAA+TGG 0.442521 4.2:+79366757 MS.gene066611:CDS
CAAGGAGAAGCAACTTCTGC+TGG 0.444325 4.2:+79363348 MS.gene066611:CDS
GCATTCTCAACTAGCCAAGT+TGG 0.447262 4.2:-79368212 None:intergenic
CATTCTCAACTAGCCAAGTT+GGG 0.448089 4.2:-79368211 None:intergenic
CAATGTCGAGCTTCGGGTGC+AGG 0.448719 4.2:+79368376 MS.gene066611:CDS
CGAAGCTCGACATTGCTAAT+GGG 0.450044 4.2:-79368368 None:intergenic
TTGAACACAGACATTCTGAT+AGG 0.452081 4.2:+79365589 MS.gene066611:CDS
AACAGAAGCGTCCAAAGGTT+GGG 0.452288 4.2:-79368322 None:intergenic
ACATTTATTGAAAGAAGGAT+TGG 0.453560 4.2:+79363679 MS.gene066611:CDS
AACTTCTGTGAAATCTAGAA+TGG 0.461539 4.2:+79367548 MS.gene066611:CDS
AGGAAGTCTTGCTTCATTGA+AGG 0.463651 4.2:+79366413 MS.gene066611:CDS
AAAATGGCCTGGGATCTGTC+AGG 0.464219 4.2:-79368262 None:intergenic
AGAAGATGAAGAAAAGGAAA+GGG 0.464951 4.2:+79363050 MS.gene066611:CDS
GCCTTAAGAGAAGTAGGAAA+CGG 0.466119 4.2:-79367252 None:intergenic
GAAAAGGAAAGGGATGGAAC+AGG 0.466178 4.2:+79363060 MS.gene066611:CDS
CTGTGCATCATAAAATGGCC+TGG 0.468369 4.2:-79368273 None:intergenic
AGCAATTCTCAGCTTCAAGC+AGG 0.472080 4.2:-79367281 None:intergenic
TAGACCAATCAAAAGTTGGC+AGG 0.476743 4.2:+79366499 MS.gene066611:CDS
CAACAGAAGCGTCCAAAGGT+TGG 0.477077 4.2:-79368323 None:intergenic
AGTCTTTGTCACTGGACAAA+GGG 0.478260 4.2:+79366044 MS.gene066611:CDS
CAATAATACCACTGCGAGCA+TGG 0.479845 4.2:-79364662 None:intergenic
ACTTACCTTCTTAATTTGCA+TGG 0.480679 4.2:-79366946 None:intergenic
AGTCATCGTGCAATATCAAT+CGG 0.484604 4.2:+79363534 MS.gene066611:CDS
ATTTCTTCGAAGACCGCTGA+TGG 0.485840 4.2:+79367993 MS.gene066611:CDS
CTATCCTCTCCCTCTGGTTG+AGG 0.488354 4.2:+79367908 MS.gene066611:CDS
CAACTAAGAAGATGAAGAAA+AGG 0.490584 4.2:+79363044 MS.gene066611:CDS
AGGTCATCATCGTGTGGGAG+TGG 0.490638 4.2:-79363707 None:intergenic
GTTGAGAAAGTACCTGTTCA+TGG 0.491612 4.2:+79366903 MS.gene066611:CDS
GGTGCAGGTTAAGGAATTTG+AGG 0.492263 4.2:+79363787 MS.gene066611:CDS
CTCATTGTAAACCAGAAACT+CGG 0.494348 4.2:-79368108 None:intergenic
TGAAGTGAAATGGATAAGTA+AGG 0.494602 4.2:+79366767 MS.gene066611:CDS
TTCTGTCCTAATTCTTGATG+AGG 0.494746 4.2:+79365552 MS.gene066611:CDS
ACTCAATTCATTGAAGTTCG+TGG 0.495767 4.2:-79364286 None:intergenic
TGTGATCAGAACTCGCCAAA+AGG 0.495807 4.2:+79365624 MS.gene066611:CDS
GGTTTAGACCAATCAAAAGT+TGG 0.498077 4.2:+79366495 MS.gene066611:CDS
AAGTTTGGACATTTCATCCA+TGG 0.498171 4.2:-79367763 None:intergenic
GAAAATCACAATTCCTCTCC+AGG 0.499197 4.2:+79366537 MS.gene066611:CDS
AGAGCTGGAAGAACTGCTGC+GGG 0.499420 4.2:+79366813 MS.gene066611:CDS
GGCTGACCAAGTAAAATGTT+GGG 0.500050 4.2:+79368295 MS.gene066611:CDS
ACCATCTGTATTCACATTCG+AGG 0.501083 4.2:-79366475 None:intergenic
AGAAGGACAACACCATGAAC+AGG 0.503247 4.2:-79366915 None:intergenic
CTGCTTTCGAAAACTTGTCT+GGG 0.505608 4.2:+79366436 MS.gene066611:CDS
AATTCCAGTGTCATCGTATG+TGG 0.507720 4.2:+79364450 MS.gene066611:CDS
TCACTCAAAATGGAAAGTAT+TGG 0.508543 4.2:+79362272 None:intergenic
AAGAAGATGAAGAAAAGGAA+AGG 0.509058 4.2:+79363049 MS.gene066611:CDS
GGTACTTTCTCAACTTCAGC+AGG 0.509754 4.2:-79366894 None:intergenic
GCATCTGCTGCTCAACGTGC+AGG 0.510073 4.2:+79366789 MS.gene066611:CDS
CCTTAAGAGAAGTAGGAAAC+GGG 0.510289 4.2:-79367251 None:intergenic
GCAAGCACTTTGAAGAGCTA+TGG 0.510432 4.2:+79368642 MS.gene066611:CDS
CTCCGCCCCTGACAGATCCC+AGG 0.510824 4.2:+79368255 MS.gene066611:CDS
CCACACGATGATGACCTGTC+AGG 0.511747 4.2:+79363713 MS.gene066611:CDS
TTTATTGAAAGAAGGATTGG+AGG 0.511944 4.2:+79363682 MS.gene066611:CDS
CTCTCCCTCTGGTTGAGGAA+AGG 0.513554 4.2:+79367913 MS.gene066611:CDS
CAAGAGTACTCATGGACTCA+TGG 0.513768 4.2:+79367840 MS.gene066611:CDS
ACCAACATAATCTGTTATCT+CGG 0.513805 4.2:-79365965 None:intergenic
CGTATGAATCTCTTCTTCCT+CGG 0.513965 4.2:-79363765 None:intergenic
GTGGATGTCTTAGGAAATGA+AGG 0.514275 4.2:+79366393 MS.gene066611:CDS
GAAATCCATGCAAATTAAGA+AGG 0.515166 4.2:+79366941 MS.gene066611:CDS
AATTCCAGGGATTAAGTATG+TGG 0.516038 4.2:+79366686 MS.gene066611:CDS
GTCAAGCAATATGTGCTGGC+TGG 0.517021 4.2:+79367943 MS.gene066611:CDS
ACTTCTGTGAAATCTAGAAT+GGG 0.517276 4.2:+79367549 MS.gene066611:CDS
GAAGCAGCCTTAAGAGAAGT+AGG 0.518963 4.2:-79367258 None:intergenic
AGGCTGACCAAGTAAAATGT+TGG 0.519898 4.2:+79368294 MS.gene066611:CDS
TGCATTGCATTTCAAAACCA+TGG 0.520011 4.2:+79367746 MS.gene066611:CDS
TTTGAGGTTAGTTATGGAGA+TGG 0.520703 4.2:+79362998 MS.gene066611:intron
TAGACAGCAACTACTCAGAT+TGG 0.521283 4.2:+79367785 MS.gene066611:CDS
TAACGAATGTGGACCCAACT+TGG 0.521364 4.2:+79368198 MS.gene066611:CDS
ATGTGCTGGCTGGGCAGATA+GGG 0.521666 4.2:+79367953 MS.gene066611:CDS
TAAAACAACTCAGGTTCCTC+AGG 0.524151 4.2:+79364488 MS.gene066611:CDS
AAAGAAGTTGAAGAAATCAG+AGG 0.528006 4.2:+79363230 MS.gene066611:CDS
TGCGCACTATCCTCTCCCTC+TGG 0.528243 4.2:+79367902 MS.gene066611:CDS
TTATAAGCAAGTTAAATAGC+AGG 0.529503 4.2:+79368525 MS.gene066611:CDS
TAGAGGATGTGGAACATGCT+TGG 0.529774 4.2:+79367868 MS.gene066611:CDS
TCCTCGAATGTGAATACAGA+TGG 0.530026 4.2:+79366474 MS.gene066611:CDS
TTCATCAGGTTGCTTGTCAG+TGG 0.530029 4.2:-79363951 None:intergenic
AATGAAACAAGTTCTGTTGA+GGG 0.530197 4.2:+79366162 MS.gene066611:CDS
TTCATTTGTGTAGGATGACA+AGG 0.531957 4.2:+79363330 MS.gene066611:intron
GGGAAGTAGAGGACTTGTGC+AGG 0.533121 4.2:+79366064 MS.gene066611:CDS
TGCTGCATATAAGAAGATCT+TGG 0.535054 4.2:+79365987 MS.gene066611:CDS
TGTGCATCATAAAATGGCCT+GGG 0.535128 4.2:-79368272 None:intergenic
GGATCTTCCTATTGTCATGA+TGG 0.537396 4.2:+79364398 MS.gene066611:CDS
GTTTAGAACAAGAGTACTCA+TGG 0.538182 4.2:+79367832 MS.gene066611:CDS
GAAGCTACGCAAAGCTTCAA+AGG 0.538831 4.2:+79366086 MS.gene066611:CDS
ACACGAAGTTGAGCTGCAGC+AGG 0.540361 4.2:-79366594 None:intergenic
CTAATGGGTATTGAATGCTT+AGG 0.540781 4.2:-79368353 None:intergenic
GAGCTATGGTTACAAATACT+TGG 0.540973 4.2:+79368656 MS.gene066611:CDS
TATGTCATCAATAGAACAAG+AGG 0.542119 4.2:-79363993 None:intergenic
CTCGTAGGAACTTCTATCAC+AGG 0.543202 4.2:-79365907 None:intergenic
GATGAAGAAAAGGAAAGGGA+TGG 0.545557 4.2:+79363054 MS.gene066611:CDS
TCATGGAACAATAGAGGATG+TGG 0.545889 4.2:+79367857 MS.gene066611:CDS
AATTCATTGAAGTTCGTGGA+GGG 0.546056 4.2:-79364282 None:intergenic
TTTCGAACTGATTTCAAACA+TGG 0.547526 4.2:-79368434 None:intergenic
TCATTGTAAACCAGAAACTC+GGG 0.548037 4.2:-79368107 None:intergenic
TTATGATGAACAACAGAAGA+TGG 0.551483 4.2:+79365765 MS.gene066611:CDS
ATGGACTCATGGAACAATAG+AGG 0.552165 4.2:+79367851 MS.gene066611:CDS
TGGCATATGAGCTTGGTGTT+CGG 0.553039 4.2:+79364733 MS.gene066611:CDS
TCAACCACATACTTAATCCC+TGG 0.554547 4.2:-79366690 None:intergenic
GCAGGCAGCATAGCATAAAG+TGG 0.555254 4.2:-79366576 None:intergenic
ATTCATTGAAGTTCGTGGAG+GGG 0.555979 4.2:-79364281 None:intergenic
TTGCACGATGACTGCAGAAG+AGG 0.557173 4.2:-79363524 None:intergenic
AGAAGAGATTCATACGGTGC+AGG 0.557852 4.2:+79363772 MS.gene066611:CDS
CACAACTGTAGGAGTAGTCA+AGG 0.558317 4.2:-79364337 None:intergenic
CTTTCCTCAACCAGAGGGAG+AGG 0.560231 4.2:-79367912 None:intergenic
CTATGATTCCTCTAATGGCA+TGG 0.560412 4.2:+79366737 MS.gene066611:CDS
AGTATGTGGTTGATACTGGA+AGG 0.561153 4.2:+79366700 MS.gene066611:CDS
CAATGAAACAAGTTCTGTTG+AGG 0.562116 4.2:+79366161 MS.gene066611:CDS
ATTTGTCAAGCAATATGTGC+TGG 0.563883 4.2:+79367939 MS.gene066611:CDS
AAACATCTTTAACAATTCCA+GGG 0.564844 4.2:+79366673 MS.gene066611:CDS
GGTAGAACAAAGAGTGCACC+TGG 0.565397 4.2:-79366555 None:intergenic
GTCATCGTGCAATATCAATC+GGG 0.565504 4.2:+79363535 MS.gene066611:CDS
TCAGTGGAAACGTCAGCCAC+AGG 0.567145 4.2:-79363935 None:intergenic
TATGAGCTTGGTGTTCGGCT+AGG 0.567444 4.2:+79364738 MS.gene066611:CDS
GGAATACTAGTCTTTGTCAC+TGG 0.567489 4.2:+79366036 MS.gene066611:CDS
TCAAGCAATATGTGCTGGCT+GGG 0.567543 4.2:+79367944 MS.gene066611:CDS
CAGAGCTGGAAGAACTGCTG+CGG 0.567671 4.2:+79366812 MS.gene066611:CDS
AGAAGAGGAAATGCATACTC+AGG 0.567692 4.2:-79363509 None:intergenic
AGAGGTTCAAGAGAAAAGAA+AGG 0.568385 4.2:+79364377 MS.gene066611:CDS
CTCCTCAAAATAGTTTCAGG+AGG 0.568407 4.2:-79368470 None:intergenic
GGAGAGACAATTTCTCGTGC+CGG 0.568930 4.2:+79368014 MS.gene066611:CDS
GACTTATACTTTCTCCTGAA+AGG 0.569573 4.2:-79365789 None:intergenic
CTAGAATGACGAGGACTCAA+AGG 0.570088 4.2:-79367372 None:intergenic
AAATGGCCTGGGATCTGTCA+GGG 0.571613 4.2:-79368261 None:intergenic
TGTGAAGTCTTGCACTCGCA+AGG 0.573147 4.2:-79365857 None:intergenic
AGAGGACAATAACAATATTG+TGG 0.573156 4.2:+79366374 MS.gene066611:CDS
AAACCTATCAGTTTGTTGCA+TGG 0.573245 4.2:-79366235 None:intergenic
GGTTGATACTGGAAGGGAAA+AGG 0.574911 4.2:+79366707 MS.gene066611:CDS
GGTCATCATCGTGTGGGAGT+GGG 0.576815 4.2:-79363706 None:intergenic
AACAAAGAGTGCACCTGGAG+AGG 0.579370 4.2:-79366550 None:intergenic
CCTGACAGGTCATCATCGTG+TGG 0.579695 4.2:-79363713 None:intergenic
TGAACACAGACATTCTGATA+GGG 0.585901 4.2:+79365590 MS.gene066611:CDS
CACACGATGATGACCTGTCA+GGG 0.589326 4.2:+79363714 MS.gene066611:CDS
TTTGCATGGATTTCAAGAGA+AGG 0.591230 4.2:-79366932 None:intergenic
GTAACTGGAAATTGCCTCGT+AGG 0.591566 4.2:-79365922 None:intergenic
CTATAAACATGCACAACTGT+AGG 0.591750 4.2:-79364348 None:intergenic
AAATAATCACGACGGTTCAG+AGG 0.592070 4.2:+79366356 MS.gene066611:CDS
TCGTGTATTTGATGGAGTCA+AGG 0.592804 4.2:+79366611 MS.gene066611:CDS
ACACTGCAAGGCATATGCTA+TGG 0.593881 4.2:-79367682 None:intergenic
CACTGGACAAAGGGAAGTAG+AGG 0.594904 4.2:+79366053 MS.gene066611:CDS
GGAACTTCTATCACAGGTGG+AGG 0.595279 4.2:-79365901 None:intergenic
ACTTCAGCAGGAGAGAACTC+AGG 0.597017 4.2:-79366882 None:intergenic
TCCTCAAAATAGTTTCAGGA+GGG 0.597476 4.2:-79368469 None:intergenic
TGGTGTTCGGCTAGGAAAGG+AGG 0.598209 4.2:+79364746 MS.gene066611:CDS
GTTCGGCTAGGAAAGGAGGT+TGG 0.599481 4.2:+79364750 MS.gene066611:CDS
AGACCAATCAAAAGTTGGCA+GGG 0.601382 4.2:+79366500 MS.gene066611:CDS
CTATCACAGGTGGAGGAGTG+TGG 0.601680 4.2:-79365894 None:intergenic
ATGTTCAGATTAATTCTCAA+AGG 0.601695 4.2:+79362300 MS.gene066611:CDS
CATGCATGACTGATACCTAC+CGG 0.604135 4.2:-79368033 None:intergenic
TAGTCTTTGTCACTGGACAA+AGG 0.604317 4.2:+79366043 MS.gene066611:CDS
TTTGTGAACTAGTTCTTGAG+GGG 0.606084 4.2:-79363879 None:intergenic
TTCTTGATGAGGCTCATGAA+AGG 0.607566 4.2:+79365563 MS.gene066611:CDS
GCTTGGTGTTCGGCTAGGAA+AGG 0.610225 4.2:+79364743 MS.gene066611:CDS
ATATGCCACACGCTTTGCTG+TGG 0.612023 4.2:-79364718 None:intergenic
TCACAAGAAGTTGCCATCTG+GGG 0.612577 4.2:+79366014 MS.gene066611:CDS
CACAAGAAGTTGCCATCTGG+GGG 0.613921 4.2:+79366015 MS.gene066611:CDS
AAGCGTGTGGCATATGAGCT+TGG 0.616012 4.2:+79364726 MS.gene066611:CDS
GTCATCAATAGAACAAGAGG+TGG 0.618955 4.2:-79363990 None:intergenic
AATGGCCTGGGATCTGTCAG+GGG 0.620726 4.2:-79368260 None:intergenic
GCAATTCTCAGCTTCAAGCA+GGG 0.620943 4.2:-79367280 None:intergenic
GTATGTGGTTGATACTGGAA+GGG 0.622102 4.2:+79366701 MS.gene066611:CDS
CGTGAAGGAAAAGCGTAGGA+AGG 0.624120 4.2:+79363652 MS.gene066611:CDS
TGAATGTTCAAAACACTGCA+AGG 0.624618 4.2:-79367694 None:intergenic
CGGTAGGTATCAGTCATGCA+TGG 0.626300 4.2:+79368034 MS.gene066611:CDS
GCGAAGAGAGCATACATGCA+TGG 0.626438 4.2:+79368173 MS.gene066611:CDS
TTCTCCACATACGATGACAC+TGG 0.626685 4.2:-79364454 None:intergenic
CTCCCAACAGAAGCGTCCAA+AGG 0.627677 4.2:-79368327 None:intergenic
ACCGAGATAACAGATTATGT+TGG 0.628339 4.2:+79365964 MS.gene066611:CDS
CTGACAGGTCATCATCGTGT+GGG 0.630580 4.2:-79363712 None:intergenic
TGCATGTACATCTGAATCCG+AGG 0.632412 4.2:+79363748 MS.gene066611:CDS
GTATTTGATGGAGTCAAGGA+GGG 0.635278 4.2:+79366615 MS.gene066611:CDS
CTGACCTTCAAGTAAAGCAT+AGG 0.636592 4.2:-79368405 None:intergenic
AGACAATTTCTCGTGCCGGT+AGG 0.637171 4.2:+79368018 MS.gene066611:CDS
GGCCTGGGATCTGTCAGGGG+CGG 0.638107 4.2:-79368257 None:intergenic
TGTCACTCAACCACGTCGAG+TGG 0.639676 4.2:+79364686 MS.gene066611:CDS
AGTTCTTGAGGGGACTCCAA+AGG 0.639955 4.2:-79363869 None:intergenic
AGGATGTGGTAAAACAACTC+AGG 0.640097 4.2:+79364479 MS.gene066611:CDS
TGCAAGACTTCACATCTGGA+AGG 0.640204 4.2:+79365866 MS.gene066611:CDS
GGCCTTTGTGTAGAAACATG+TGG 0.640515 4.2:-79364315 None:intergenic
ATTCTGTTGTATTAGGAACG+TGG 0.643438 4.2:+79363150 MS.gene066611:intron
CATGCATGGAGTAACGAATG+TGG 0.644783 4.2:+79368187 MS.gene066611:CDS
TTCCACATGTTTCTACACAA+AGG 0.645502 4.2:+79364313 MS.gene066611:CDS
TTTGAGAATTAATCTGAACA+TGG 0.645590 4.2:-79362298 None:intergenic
GTAGGAACTTCTATCACAGG+TGG 0.645956 4.2:-79365904 None:intergenic
CGAGGAAGAAGAGATTCATA+CGG 0.646640 4.2:+79363766 MS.gene066611:CDS
AGACCGTGAAGGAAAAGCGT+AGG 0.650012 4.2:+79363648 MS.gene066611:CDS
TGAGCCTTTCCTCAACCAGA+GGG 0.650198 4.2:-79367917 None:intergenic
AGCAAGTTCCATGCTCGCAG+TGG 0.651221 4.2:+79364654 MS.gene066611:CDS
GTATGTGGAGAAACAGGATG+TGG 0.652929 4.2:+79364465 MS.gene066611:CDS
ATGAGCCTTTCCTCAACCAG+AGG 0.655778 4.2:-79367918 None:intergenic
CAATTCATTGAAGTTCGTGG+AGG 0.657490 4.2:-79364283 None:intergenic
CCTCAAAATAGTTTCAGGAG+GGG 0.659333 4.2:-79368468 None:intergenic
GCATGTTTATAGGCCACCAG+AGG 0.659361 4.2:+79364359 MS.gene066611:CDS
TGAAACTGTCGCTGAACCTG+TGG 0.661542 4.2:+79363919 MS.gene066611:CDS
TCATCAATAGAACAAGAGGT+GGG 0.663541 4.2:-79363989 None:intergenic
TGTATTTGATGGAGTCAAGG+AGG 0.668436 4.2:+79366614 MS.gene066611:CDS
ACTCAAAGGATAAAGTGCCA+TGG 0.671377 4.2:-79367358 None:intergenic
GCAAGAACAGCCACTCGACG+TGG 0.677350 4.2:-79364696 None:intergenic
AGAAATTGTCTCTCCATCAG+CGG 0.677846 4.2:-79368006 None:intergenic
TCTTGCCACAGCAAAGCGTG+TGG 0.684386 4.2:+79364713 MS.gene066611:CDS
ATTGTAGGTTGAGACCGTGA+AGG 0.691525 4.2:+79363637 MS.gene066611:intron
CATTGTAAACCAGAAACTCG+GGG 0.715180 4.2:-79368106 None:intergenic
ACAACTGTAGGAGTAGTCAA+GGG 0.716319 4.2:-79364336 None:intergenic
GAAGTCTTGCACTCGCAAGG+TGG 0.730037 4.2:-79365854 None:intergenic
AGGATCATTCTAGAATGACG+AGG 0.732089 4.2:-79367381 None:intergenic
TAGGAACGTGGAAAGAAACG+TGG 0.733549 4.2:+79363162 MS.gene066611:intron
CTGTGATAGAAGTTCCTACG+AGG 0.749566 4.2:+79365908 MS.gene066611:CDS
TGTGGAAAATGATAGCAATG+CGG 0.788090 4.2:+79366137 MS.gene066611:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATTGTAGTT+AGG + chr4.2:79362729-79362748 MS.gene066611:intron 10.0%
!!! AAACTTAATTTGAAAAAAAT+TGG - chr4.2:79365672-79365691 None:intergenic 10.0%
!!! TCAATGATTTTTTTTTATAT+AGG + chr4.2:79367218-79367237 MS.gene066611:intron 10.0%
!!! TGTATATAAAATTTCTTTTT+CGG - chr4.2:79363840-79363859 None:intergenic 10.0%
!! AAAATACATGTTCTTAATTA+AGG - chr4.2:79365059-79365078 None:intergenic 15.0%
!! AATATTACAAAGTGATTTAT+AGG + chr4.2:79362448-79362467 MS.gene066611:intron 15.0%
!! AATTACAAAATAAGATAGTA+CGG - chr4.2:79365699-79365718 None:intergenic 15.0%
!! ACAAAAATATTAAAAGTCTT+AGG + chr4.2:79363587-79363606 MS.gene066611:intron 15.0%
!! CAAAAATATTAAAAGTCTTA+GGG + chr4.2:79363588-79363607 MS.gene066611:intron 15.0%
!! TTACTGTTATAAAAAATACA+AGG + chr4.2:79367403-79367422 MS.gene066611:CDS 15.0%
!!! AATTAAGAACATGTATTTTT+CGG + chr4.2:79365060-79365079 MS.gene066611:intron 15.0%
!!! ATAATTTTGTTTCTTTTTTG+AGG + chr4.2:79362982-79363001 MS.gene066611:intron 15.0%
!!! ATTTATTTTTAACTCAAATC+CGG - chr4.2:79362706-79362725 None:intergenic 15.0%
!!! TTAAGTTGTTGAATAAAAAA+TGG + chr4.2:79363448-79363467 MS.gene066611:intron 15.0%
!!! TTCAATTTCTTTTTTTCATT+TGG + chr4.2:79364089-79364108 MS.gene066611:intron 15.0%
!!! TTGTATTTTTTATAACAGTA+AGG - chr4.2:79367404-79367423 None:intergenic 15.0%
!!! TTTTTTTTATCACATTAGAT+TGG + chr4.2:79365244-79365263 MS.gene066611:intron 15.0%
!! AACTTACTTTAATGTCTTAA+GGG - chr4.2:79363380-79363399 None:intergenic 20.0%
!! AATCTATCATAATAGAATGT+AGG - chr4.2:79365746-79365765 None:intergenic 20.0%
!! CTTATCTCAAATGATAAATA+AGG + chr4.2:79364926-79364945 MS.gene066611:intron 20.0%
!! GTTAGATACGATAAAAAAAT+TGG + chr4.2:79364780-79364799 MS.gene066611:CDS 20.0%
!! TAACTTACTTTAATGTCTTA+AGG - chr4.2:79363381-79363400 None:intergenic 20.0%
!! TGAATTGAAATATTGCAAAA+GGG + chr4.2:79362752-79362771 MS.gene066611:intron 20.0%
!! TGTGTAAAACATTATTTACA+CGG - chr4.2:79362365-79362384 None:intergenic 20.0%
!!! AATGCATTATTTTGAAGAAA+AGG - chr4.2:79362340-79362359 None:intergenic 20.0%
!!! AGAGTTATTTTCAGAAATTT+TGG + chr4.2:79368598-79368617 MS.gene066611:intron 20.0%
!!! ATGCATTATTTTGAAGAAAA+GGG - chr4.2:79362339-79362358 None:intergenic 20.0%
!!! CTTATTTATCATTTGAGATA+AGG - chr4.2:79364928-79364947 None:intergenic 20.0%
!!! TATTTTCAGAAATTTTGGAT+TGG + chr4.2:79368603-79368622 MS.gene066611:intron 20.0%
!!! TTTATGTGTATGTACATTTT+AGG + chr4.2:79365207-79365226 MS.gene066611:intron 20.0%
! AAACATCTTTAACAATTCCA+GGG + chr4.2:79366673-79366692 MS.gene066611:CDS 25.0%
! AAATTGCTAGTGATATATAG+TGG - chr4.2:79367059-79367078 None:intergenic 25.0%
! AAGTATAAGTCCTGATAAAA+TGG + chr4.2:79365801-79365820 MS.gene066611:CDS 25.0%
! ACACTTCTAAATATAATGAG+CGG + chr4.2:79362775-79362794 MS.gene066611:intron 25.0%
! ACATTTATTGAAAGAAGGAT+TGG + chr4.2:79363679-79363698 MS.gene066611:CDS 25.0%
! ACTATATATCACTAGCAATT+TGG + chr4.2:79367058-79367077 MS.gene066611:intron 25.0%
! AGAAACGTTTGTTCATATTT+AGG + chr4.2:79364979-79364998 MS.gene066611:intron 25.0%
! ATCCAATATAAACAAGTAGA+TGG - chr4.2:79367001-79367020 None:intergenic 25.0%
! ATGTTCAGATTAATTCTCAA+AGG + chr4.2:79362300-79362319 MS.gene066611:CDS 25.0%
! CAAATTATCAGACAATAGAA+AGG - chr4.2:79367163-79367182 None:intergenic 25.0%
! CATAAAAAGCAACAATTCAA+AGG + chr4.2:79364012-79364031 MS.gene066611:CDS 25.0%
! CATTTCATATCACATTAGAT+TGG + chr4.2:79365143-79365162 MS.gene066611:intron 25.0%
! GAAAAGACTGAATCAATATT+TGG + chr4.2:79362938-79362957 MS.gene066611:intron 25.0%
! GATGATAAAAATAATCACGA+CGG + chr4.2:79366348-79366367 MS.gene066611:CDS 25.0%
! GGATGTTATCATTAACTATA+AGG + chr4.2:79367017-79367036 MS.gene066611:intron 25.0%
! GTGAATTGAAATATTGCAAA+AGG + chr4.2:79362751-79362770 MS.gene066611:intron 25.0%
! TATAAAAATCCAGTTTGAGT+AGG - chr4.2:79367198-79367217 None:intergenic 25.0%
! TATTGCATTACAAAAGGATT+CGG - chr4.2:79367498-79367517 None:intergenic 25.0%
! TCATAACATACTCAAGTAAA+AGG - chr4.2:79364522-79364541 None:intergenic 25.0%
! TTATAAGCAAGTTAAATAGC+AGG + chr4.2:79368525-79368544 MS.gene066611:CDS 25.0%
! TTATCATTAACTATAAGGCA+AGG + chr4.2:79367022-79367041 MS.gene066611:intron 25.0%
! TTCCATCTACTTGTTTATAT+TGG + chr4.2:79366996-79367015 MS.gene066611:intron 25.0%
! TTTACTTGAGTATGTTATGA+TGG + chr4.2:79364522-79364541 MS.gene066611:intron 25.0%
! TTTCTCTTTCATTTGTTCAT+TGG + chr4.2:79365293-79365312 MS.gene066611:intron 25.0%
! TTTGAGAATTAATCTGAACA+TGG - chr4.2:79362301-79362320 None:intergenic 25.0%
!! ACTTCTGTTTCTTATTTGAT+TGG - chr4.2:79363194-79363213 None:intergenic 25.0%
!! ATTTCTGAAAATAACTCTCT+TGG - chr4.2:79368596-79368615 None:intergenic 25.0%
!! GATATTCGTCAAGATATTTT+AGG + chr4.2:79362421-79362440 MS.gene066611:intron 25.0%
!! TGCAGAATGATATTTTATTG+AGG + chr4.2:79365524-79365543 MS.gene066611:intron 25.0%
!!! AAACACTTTGATTTACCTTT+TGG - chr4.2:79365642-79365661 None:intergenic 25.0%
!!! AAAGTATTTTCATTCATCGT+TGG + chr4.2:79368063-79368082 MS.gene066611:CDS 25.0%
!!! ATTTCTTTTTCGGTTCTAAA+AGG - chr4.2:79363830-79363849 None:intergenic 25.0%
!!! TGCATTATTTTGAAGAAAAG+GGG - chr4.2:79362338-79362357 None:intergenic 25.0%
!!! TTCTTTTTTGAGGTTAGTTA+TGG + chr4.2:79362992-79363011 MS.gene066611:intron 25.0%
AAAAAGACCAAACAAAGAAG+GGG + chr4.2:79368142-79368161 MS.gene066611:CDS 30.0%
AAAGAAGTTGAAGAAATCAG+AGG + chr4.2:79363230-79363249 MS.gene066611:CDS 30.0%
AACAATATTGTGGATGTCTT+AGG + chr4.2:79366384-79366403 MS.gene066611:CDS 30.0%
AACCACCAAAAAGAACAAAA+GGG - chr4.2:79364888-79364907 None:intergenic 30.0%
AACTTCTGTGAAATCTAGAA+TGG + chr4.2:79367548-79367567 MS.gene066611:CDS 30.0%
AAGAACTATGATTCCTCTAA+TGG + chr4.2:79366732-79366751 MS.gene066611:CDS 30.0%
AAGAAGATGAAGAAAAGGAA+AGG + chr4.2:79363049-79363068 MS.gene066611:CDS 30.0%
AATGAAACAAGTTCTGTTGA+GGG + chr4.2:79366162-79366181 MS.gene066611:CDS 30.0%
ACAAAAAGACCAAACAAAGA+AGG + chr4.2:79368140-79368159 MS.gene066611:CDS 30.0%
ACCAACATAATCTGTTATCT+CGG - chr4.2:79365968-79365987 None:intergenic 30.0%
AGAAGATGAAGAAAAGGAAA+GGG + chr4.2:79363050-79363069 MS.gene066611:CDS 30.0%
AGAATCCTTTGGTCAAAAAA+GGG + chr4.2:79368493-79368512 MS.gene066611:CDS 30.0%
AGAGGACAATAACAATATTG+TGG + chr4.2:79366374-79366393 MS.gene066611:CDS 30.0%
ATATACAACTACTGTTCCTT+TGG + chr4.2:79363853-79363872 MS.gene066611:CDS 30.0%
ATTAGATTGGAAACTGACAA+TGG + chr4.2:79365156-79365175 MS.gene066611:intron 30.0%
CAAAAAGACCAAACAAAGAA+GGG + chr4.2:79368141-79368160 MS.gene066611:CDS 30.0%
CAACTAAGAAGATGAAGAAA+AGG + chr4.2:79363044-79363063 MS.gene066611:CDS 30.0%
CCTTCATATTGCATTACAAA+AGG - chr4.2:79367504-79367523 None:intergenic 30.0%
CTATCATAATAGAATGTAGG+TGG - chr4.2:79365743-79365762 None:intergenic 30.0%
GAAACATCTTTAACAATTCC+AGG + chr4.2:79366672-79366691 MS.gene066611:CDS 30.0%
GAAATCCATGCAAATTAAGA+AGG + chr4.2:79366941-79366960 MS.gene066611:CDS 30.0%
GATCGAAATTCTGTTGTATT+AGG + chr4.2:79363143-79363162 MS.gene066611:intron 30.0%
GCTGTACATTTATTGAAAGA+AGG + chr4.2:79363674-79363693 MS.gene066611:CDS 30.0%
GTTGTTTAATTGAATACCTC+TGG + chr4.2:79365500-79365519 MS.gene066611:intron 30.0%
TAAGTTGCAGATACTCAATA+TGG - chr4.2:79364209-79364228 None:intergenic 30.0%
TACACATAAACCAATGAAAG+AGG - chr4.2:79365197-79365216 None:intergenic 30.0%
TATAATCCCTTCTCAGTAAT+TGG + chr4.2:79364035-79364054 MS.gene066611:intron 30.0%
TATCAGTTTCTTTATGAAGC+TGG + chr4.2:79364621-79364640 MS.gene066611:intron 30.0%
TATGTCATCAATAGAACAAG+AGG - chr4.2:79363996-79364015 None:intergenic 30.0%
TCTATCAAGTTTATGACTGA+TGG + chr4.2:79364813-79364832 MS.gene066611:CDS 30.0%
TCTCAACCTACAATATACAA+TGG - chr4.2:79363631-79363650 None:intergenic 30.0%
TGAAGTGAAATGGATAAGTA+AGG + chr4.2:79366767-79366786 MS.gene066611:CDS 30.0%
TGGCATGAGTATTAAATGAA+CGG - chr4.2:79365723-79365742 None:intergenic 30.0%
TTATGACTTTCCTCTTTCAT+TGG + chr4.2:79365184-79365203 MS.gene066611:intron 30.0%
TTATGATGAACAACAGAAGA+TGG + chr4.2:79365765-79365784 MS.gene066611:CDS 30.0%
TTCTAAATATAATGAGCGGA+GGG + chr4.2:79362779-79362798 MS.gene066611:intron 30.0%
TTGGTACATTTCATTTGTGT+AGG + chr4.2:79363321-79363340 MS.gene066611:intron 30.0%
TTTATTGAAAGAAGGATTGG+AGG + chr4.2:79363682-79363701 MS.gene066611:CDS 30.0%
TTTGCAAAATACACTGTAAC+TGG - chr4.2:79365940-79365959 None:intergenic 30.0%
! AACGGAAAAACCATTTTATC+AGG - chr4.2:79365814-79365833 None:intergenic 30.0%
! ACTTCTGTGAAATCTAGAAT+GGG + chr4.2:79367549-79367568 MS.gene066611:CDS 30.0%
! ATCACTAGCAATTTGGTTTA+TGG + chr4.2:79367065-79367084 MS.gene066611:intron 30.0%
! ATTAAGTATGTGGTTGATAC+TGG + chr4.2:79366696-79366715 MS.gene066611:CDS 30.0%
! CAACTTACATCAATGCTTTT+TGG + chr4.2:79364222-79364241 MS.gene066611:intron 30.0%
! CCTTTTGTAATGCAATATGA+AGG + chr4.2:79367501-79367520 MS.gene066611:CDS 30.0%
! CTTCAATACTGACTAAACAT+GGG - chr4.2:79362683-79362702 None:intergenic 30.0%
! CTTTTCTTCATCTTCTTAGT+TGG - chr4.2:79363046-79363065 None:intergenic 30.0%
! GAAAAAAGTTAAAGCATCTG+TGG + chr4.2:79366119-79366138 MS.gene066611:CDS 30.0%
! TGTGAATGAATGTGCATTTT+AGG + chr4.2:79365112-79365131 MS.gene066611:intron 30.0%
! TGTTTCCCTTTTGTTCTTTT+TGG + chr4.2:79364880-79364899 MS.gene066611:intron 30.0%
! TTCAATACTGACTAAACATG+GGG - chr4.2:79362682-79362701 None:intergenic 30.0%
! TTCATATTTAGGATCCTTGT+AGG + chr4.2:79364990-79365009 MS.gene066611:intron 30.0%
! TTTCGAACTGATTTCAAACA+TGG - chr4.2:79368437-79368456 None:intergenic 30.0%
!! ACTTACCTTCTTAATTTGCA+TGG - chr4.2:79366949-79366968 None:intergenic 30.0%
!! ATTGACAACACTGATTTGAT+CGG + chr4.2:79362886-79362905 MS.gene066611:intron 30.0%
!! TTTTGTGAACTAGTTCTTGA+GGG - chr4.2:79363883-79363902 None:intergenic 30.0%
!! TTTTTGTGAACTAGTTCTTG+AGG - chr4.2:79363884-79363903 None:intergenic 30.0%
!!! AATTTTGGATTGGTTTCAAC+AGG + chr4.2:79368613-79368632 MS.gene066611:intron 30.0%
!!! ATTTTGGATTGGTTTCAACA+GGG + chr4.2:79368614-79368633 MS.gene066611:intron 30.0%
!!! GTCTTTTTTCAGAGTGATAA+AGG + chr4.2:79367807-79367826 MS.gene066611:CDS 30.0%
!!! GTTCTCTTCTTTTTTGTCTT+GGG + chr4.2:79363287-79363306 MS.gene066611:intron 30.0%
!!! TGGCATTTTTTACTTGATAC+AGG + chr4.2:79364242-79364261 MS.gene066611:intron 30.0%
!!! TGTTCTCTTCTTTTTTGTCT+TGG + chr4.2:79363286-79363305 MS.gene066611:intron 30.0%
!!! TTTTTTACTTGATACAGGAC+AGG + chr4.2:79364247-79364266 MS.gene066611:intron 30.0%
!!! TTTTTTCAGAGTGATAAAGG+TGG + chr4.2:79367810-79367829 MS.gene066611:CDS 30.0%
AAATATCATTCTGCATCCAG+AGG - chr4.2:79365519-79365538 None:intergenic 35.0%
AACAAAAGGGAAACATAGCA+AGG - chr4.2:79364875-79364894 None:intergenic 35.0%
AAGTTTGGACATTTCATCCA+TGG - chr4.2:79367766-79367785 None:intergenic 35.0%
AATTCATTGAAGTTCGTGGA+GGG - chr4.2:79364285-79364304 None:intergenic 35.0%
AATTCCAGGGATTAAGTATG+TGG + chr4.2:79366686-79366705 MS.gene066611:CDS 35.0%
ACCGAGATAACAGATTATGT+TGG + chr4.2:79365964-79365983 MS.gene066611:CDS 35.0%
ACTCAATTCATTGAAGTTCG+TGG - chr4.2:79364289-79364308 None:intergenic 35.0%
AGAGGTTCAAGAGAAAAGAA+AGG + chr4.2:79364377-79364396 MS.gene066611:CDS 35.0%
AGGTTGCATAAAGTCAATAC+AGG + chr4.2:79365010-79365029 MS.gene066611:intron 35.0%
AGTCATCGTGCAATATCAAT+CGG + chr4.2:79363534-79363553 MS.gene066611:CDS 35.0%
ATTCTGTTGTATTAGGAACG+TGG + chr4.2:79363150-79363169 MS.gene066611:intron 35.0%
ATTTGTCAAGCAATATGTGC+TGG + chr4.2:79367939-79367958 MS.gene066611:CDS 35.0%
CAACAAACTGATAGGTTTAG+TGG + chr4.2:79366240-79366259 MS.gene066611:CDS 35.0%
CAATATACAATGGCAACAGT+CGG - chr4.2:79363621-79363640 None:intergenic 35.0%
CAATGAAACAAGTTCTGTTG+AGG + chr4.2:79366161-79366180 MS.gene066611:CDS 35.0%
CGAAGAAATTGGAATACGTT+TGG - chr4.2:79367982-79368001 None:intergenic 35.0%
CTACAGTTGTGCATGTTTAT+AGG + chr4.2:79364349-79364368 MS.gene066611:CDS 35.0%
CTATAAACATGCACAACTGT+AGG - chr4.2:79364351-79364370 None:intergenic 35.0%
CTCATTGTAAACCAGAAACT+CGG - chr4.2:79368111-79368130 None:intergenic 35.0%
CTGTTGCCATTGTATATTGT+AGG + chr4.2:79363622-79363641 MS.gene066611:intron 35.0%
CTTCTAAATATAATGAGCGG+AGG + chr4.2:79362778-79362797 MS.gene066611:intron 35.0%
GAACCACCAAAAAGAACAAA+AGG - chr4.2:79364889-79364908 None:intergenic 35.0%
GAAGAACTTCTGATTTCATC+AGG - chr4.2:79363968-79363987 None:intergenic 35.0%
GACTTATACTTTCTCCTGAA+AGG - chr4.2:79365792-79365811 None:intergenic 35.0%
GAGAATCCTTTGGTCAAAAA+AGG + chr4.2:79368492-79368511 MS.gene066611:CDS 35.0%
GAGCTATGGTTACAAATACT+TGG + chr4.2:79368656-79368675 MS.gene066611:CDS 35.0%
GCAATAAGATGTGATTGGAT+TGG - chr4.2:79362398-79362417 None:intergenic 35.0%
GGTTTAGACCAATCAAAAGT+TGG + chr4.2:79366495-79366514 MS.gene066611:CDS 35.0%
GTGTCAACAATTCATGTGTT+GGG + chr4.2:79362592-79362611 MS.gene066611:intron 35.0%
TAACTATAAGGCAAGGAAGT+AGG + chr4.2:79367029-79367048 MS.gene066611:intron 35.0%
TCAGTGCAATAAGATGTGAT+TGG - chr4.2:79362403-79362422 None:intergenic 35.0%
TCATCAATAGAACAAGAGGT+GGG - chr4.2:79363992-79364011 None:intergenic 35.0%
TCATTGTAAACCAGAAACTC+GGG - chr4.2:79368110-79368129 None:intergenic 35.0%
TCCTCAAAATAGTTTCAGGA+GGG - chr4.2:79368472-79368491 None:intergenic 35.0%
TCTCTCCTCAAAATAGTTTC+AGG - chr4.2:79368476-79368495 None:intergenic 35.0%
TGAACACAGACATTCTGATA+GGG + chr4.2:79365590-79365609 MS.gene066611:CDS 35.0%
TGAAGAAATCAGAGGTTTGT+GGG + chr4.2:79363238-79363257 MS.gene066611:intron 35.0%
TGAATGTTCAAAACACTGCA+AGG - chr4.2:79367697-79367716 None:intergenic 35.0%
TGCATTGCATTTCAAAACCA+TGG + chr4.2:79367746-79367765 MS.gene066611:CDS 35.0%
TGCTGCATATAAGAAGATCT+TGG + chr4.2:79365987-79366006 MS.gene066611:CDS 35.0%
TGGAGACATATGAAGTGAAA+TGG + chr4.2:79366757-79366776 MS.gene066611:CDS 35.0%
TGTGGAAAATGATAGCAATG+CGG + chr4.2:79366137-79366156 MS.gene066611:CDS 35.0%
TTCAGAAACAGAGAGTGAAT+TGG + chr4.2:79366314-79366333 MS.gene066611:CDS 35.0%
TTCATTTGTGTAGGATGACA+AGG + chr4.2:79363330-79363349 MS.gene066611:intron 35.0%
TTCTCAATTCCTACTCAAAC+TGG + chr4.2:79367186-79367205 MS.gene066611:intron 35.0%
TTCTGTCCTAATTCTTGATG+AGG + chr4.2:79365552-79365571 MS.gene066611:CDS 35.0%
TTGAACACAGACATTCTGAT+AGG + chr4.2:79365589-79365608 MS.gene066611:CDS 35.0%
TTGAAGAAATCAGAGGTTTG+TGG + chr4.2:79363237-79363256 MS.gene066611:intron 35.0%
TTGACTTTATGCAACCTACA+AGG - chr4.2:79365007-79365026 None:intergenic 35.0%
TTTCTTTATGAAGCTGGCTA+TGG + chr4.2:79364627-79364646 MS.gene066611:CDS 35.0%
TTTGCATGGATTTCAAGAGA+AGG - chr4.2:79366935-79366954 None:intergenic 35.0%
TTTGCCTATGCTTTACTTGA+AGG + chr4.2:79368401-79368420 MS.gene066611:CDS 35.0%
! AAGATGTGATTGGATTGGAT+TGG - chr4.2:79362393-79362412 None:intergenic 35.0%
! AATGATGAGCTCACACTTTT+GGG + chr4.2:79367330-79367349 MS.gene066611:CDS 35.0%
! GCTTCAATACTGACTAAACA+TGG - chr4.2:79362684-79362703 None:intergenic 35.0%
! GTAAAAGGTATACTAACCTG+AGG - chr4.2:79364507-79364526 None:intergenic 35.0%
! TGTTTAGTCAGTATTGAAGC+CGG + chr4.2:79362684-79362703 MS.gene066611:intron 35.0%
! TTCCACATGTTTCTACACAA+AGG + chr4.2:79364313-79364332 MS.gene066611:CDS 35.0%
! TTCCCTTTTGTTCTTTTTGG+TGG + chr4.2:79364883-79364902 MS.gene066611:intron 35.0%
! TTTCTTTTCTCTTGAACCTC+TGG - chr4.2:79364378-79364397 None:intergenic 35.0%
! TTTGAGGTTAGTTATGGAGA+TGG + chr4.2:79362998-79363017 MS.gene066611:intron 35.0%
! TTTGTGAACTAGTTCTTGAG+GGG - chr4.2:79363882-79363901 None:intergenic 35.0%
!! AAACCTATCAGTTTGTTGCA+TGG - chr4.2:79366238-79366257 None:intergenic 35.0%
!! ATTTTGAGGAGAGAATCCTT+TGG + chr4.2:79368482-79368501 MS.gene066611:CDS 35.0%
!! CTAATGGGTATTGAATGCTT+AGG - chr4.2:79368356-79368375 None:intergenic 35.0%
!! CTCATCAGCACAAGTTTTAA+CGG - chr4.2:79365832-79365851 None:intergenic 35.0%
!! GTGTACAAAGTGTTGTCAAA+CGG + chr4.2:79362801-79362820 MS.gene066611:intron 35.0%
!! GTTTAGAACAAGAGTACTCA+TGG + chr4.2:79367832-79367851 MS.gene066611:CDS 35.0%
!! TATTTTGAAGAAAAGGGGTG+AGG - chr4.2:79362333-79362352 None:intergenic 35.0%
!!! GCTTTGATGCTGTTTTCTAT+GGG + chr4.2:79363420-79363439 MS.gene066611:intron 35.0%
!!! TGCTTTGATGCTGTTTTCTA+TGG + chr4.2:79363419-79363438 MS.gene066611:intron 35.0%
AAATAATCACGACGGTTCAG+AGG + chr4.2:79366356-79366375 MS.gene066611:CDS 40.0%
AAGAAATCAGAGGTTTGTGG+GGG + chr4.2:79363240-79363259 MS.gene066611:intron 40.0%
AATCCCTTCTCAGTAATTGG+TGG + chr4.2:79364038-79364057 MS.gene066611:intron 40.0%
AATTCCAGTGTCATCGTATG+TGG + chr4.2:79364450-79364469 MS.gene066611:CDS 40.0%
ACAACTGTAGGAGTAGTCAA+GGG - chr4.2:79364339-79364358 None:intergenic 40.0%
ACACATGAATTGTTGACACC+AGG - chr4.2:79362591-79362610 None:intergenic 40.0%
ACCATCTGTATTCACATTCG+AGG - chr4.2:79366478-79366497 None:intergenic 40.0%
AGAAATTGTCTCTCCATCAG+CGG - chr4.2:79368009-79368028 None:intergenic 40.0%
AGAAGAGGAAATGCATACTC+AGG - chr4.2:79363512-79363531 None:intergenic 40.0%
AGACCAATCAAAAGTTGGCA+GGG + chr4.2:79366500-79366519 MS.gene066611:CDS 40.0%
AGACCTTTGTTCAGTTTGTG+GGG + chr4.2:79364951-79364970 MS.gene066611:intron 40.0%
AGAGACCTTTGTTCAGTTTG+TGG + chr4.2:79364949-79364968 MS.gene066611:intron 40.0%
AGGAAGTCTTGCTTCATTGA+AGG + chr4.2:79366413-79366432 MS.gene066611:CDS 40.0%
AGGATGTGGTAAAACAACTC+AGG + chr4.2:79364479-79364498 MS.gene066611:CDS 40.0%
AGGCTGACCAAGTAAAATGT+TGG + chr4.2:79368294-79368313 MS.gene066611:CDS 40.0%
AGGTAGGGATAGTTTGAACA+TGG + chr4.2:79363080-79363099 MS.gene066611:intron 40.0%
AGTCTTTGTCACTGGACAAA+GGG + chr4.2:79366044-79366063 MS.gene066611:CDS 40.0%
ATATGTCTCCATGCCATTAG+AGG - chr4.2:79366748-79366767 None:intergenic 40.0%
ATCCCTTCTCAGTAATTGGT+GGG + chr4.2:79364039-79364058 MS.gene066611:intron 40.0%
ATGGACTCATGGAACAATAG+AGG + chr4.2:79367851-79367870 MS.gene066611:CDS 40.0%
ATTCACAAGAAGTTGCCATC+TGG + chr4.2:79366012-79366031 MS.gene066611:CDS 40.0%
ATTCATTGAAGTTCGTGGAG+GGG - chr4.2:79364284-79364303 None:intergenic 40.0%
CAACATATCTGAGCATAGAG+TGG - chr4.2:79365409-79365428 None:intergenic 40.0%
CAATTCATTGAAGTTCGTGG+AGG - chr4.2:79364286-79364305 None:intergenic 40.0%
CACATGAATTGTTGACACCA+GGG - chr4.2:79362590-79362609 None:intergenic 40.0%
CATCCATGCAACAAACTGAT+AGG + chr4.2:79366232-79366251 MS.gene066611:CDS 40.0%
CATGAGCCTCATCAAGAATT+AGG - chr4.2:79365561-79365580 None:intergenic 40.0%
CATTCTCAACTAGCCAAGTT+GGG - chr4.2:79368214-79368233 None:intergenic 40.0%
CATTGTAAACCAGAAACTCG+GGG - chr4.2:79368109-79368128 None:intergenic 40.0%
CCTCAAAATAGTTTCAGGAG+GGG - chr4.2:79368471-79368490 None:intergenic 40.0%
CCTTAAGAGAAGTAGGAAAC+GGG - chr4.2:79367254-79367273 None:intergenic 40.0%
CGAGGAAGAAGAGATTCATA+CGG + chr4.2:79363766-79363785 MS.gene066611:CDS 40.0%
CGTATGAATCTCTTCTTCCT+CGG - chr4.2:79363768-79363787 None:intergenic 40.0%
CTATGATTCCTCTAATGGCA+TGG + chr4.2:79366737-79366756 MS.gene066611:CDS 40.0%
CTATGCTTTACTTGAAGGTC+AGG + chr4.2:79368406-79368425 MS.gene066611:CDS 40.0%
CTCCTCAAAATAGTTTCAGG+AGG - chr4.2:79368473-79368492 None:intergenic 40.0%
CTGACCTTCAAGTAAAGCAT+AGG - chr4.2:79368408-79368427 None:intergenic 40.0%
CTGCTTTCGAAAACTTGTCT+GGG + chr4.2:79366436-79366455 MS.gene066611:CDS 40.0%
CTTCCACACTATTCTCAACA+TGG - chr4.2:79368567-79368586 None:intergenic 40.0%
GAAAATCACAATTCCTCTCC+AGG + chr4.2:79366537-79366556 MS.gene066611:CDS 40.0%
GAAGAAATCAGAGGTTTGTG+GGG + chr4.2:79363239-79363258 MS.gene066611:intron 40.0%
GAGACCTTTGTTCAGTTTGT+GGG + chr4.2:79364950-79364969 MS.gene066611:intron 40.0%
GAGTAGTTGCTGTCTAAGTT+TGG - chr4.2:79367781-79367800 None:intergenic 40.0%
GATGAAGAAAAGGAAAGGGA+TGG + chr4.2:79363054-79363073 MS.gene066611:CDS 40.0%
GCCTTAAGAGAAGTAGGAAA+CGG - chr4.2:79367255-79367274 None:intergenic 40.0%
GCTCAACTTCGTGTATTTGA+TGG + chr4.2:79366603-79366622 MS.gene066611:CDS 40.0%
GGATCTTCCTATTGTCATGA+TGG + chr4.2:79364398-79364417 MS.gene066611:CDS 40.0%
GGCTGACCAAGTAAAATGTT+GGG + chr4.2:79368295-79368314 MS.gene066611:CDS 40.0%
GGTGTCAACAATTCATGTGT+TGG + chr4.2:79362591-79362610 MS.gene066611:intron 40.0%
GTATTTGATGGAGTCAAGGA+GGG + chr4.2:79366615-79366634 MS.gene066611:CDS 40.0%
GTCATCAATAGAACAAGAGG+TGG - chr4.2:79363993-79364012 None:intergenic 40.0%
GTCATCGTGCAATATCAATC+GGG + chr4.2:79363535-79363554 MS.gene066611:CDS 40.0%
GTGGATGTCTTAGGAAATGA+AGG + chr4.2:79366393-79366412 MS.gene066611:CDS 40.0%
TAAAACAACTCAGGTTCCTC+AGG + chr4.2:79364488-79364507 MS.gene066611:CDS 40.0%
TAGACAGCAACTACTCAGAT+TGG + chr4.2:79367785-79367804 MS.gene066611:CDS 40.0%
TAGACCAATCAAAAGTTGGC+AGG + chr4.2:79366499-79366518 MS.gene066611:CDS 40.0%
TAGTCTTTGTCACTGGACAA+AGG + chr4.2:79366043-79366062 MS.gene066611:CDS 40.0%
TCAACCACATACTTAATCCC+TGG - chr4.2:79366693-79366712 None:intergenic 40.0%
TCAGCCTGTGCATCATAAAA+TGG - chr4.2:79368281-79368300 None:intergenic 40.0%
TCATGGAACAATAGAGGATG+TGG + chr4.2:79367857-79367876 MS.gene066611:CDS 40.0%
TCCTCGAATGTGAATACAGA+TGG + chr4.2:79366474-79366493 MS.gene066611:CDS 40.0%
TCCTTTGGTCAAAAAAGGGT+AGG + chr4.2:79368497-79368516 MS.gene066611:CDS 40.0%
TCGTGTATTTGATGGAGTCA+AGG + chr4.2:79366611-79366630 MS.gene066611:CDS 40.0%
TCTTGCTCCATCATGACAAT+AGG - chr4.2:79364408-79364427 None:intergenic 40.0%
TGATAGTAGTTAGTGAAGCC+TGG + chr4.2:79362508-79362527 MS.gene066611:intron 40.0%
TGTATTTGATGGAGTCAAGG+AGG + chr4.2:79366614-79366633 MS.gene066611:CDS 40.0%
TGTGCATCATAAAATGGCCT+GGG - chr4.2:79368275-79368294 None:intergenic 40.0%
TGTTGCATGGATGAACTTCT+AGG - chr4.2:79366225-79366244 None:intergenic 40.0%
TTCACAAGAAGTTGCCATCT+GGG + chr4.2:79366013-79366032 MS.gene066611:CDS 40.0%
TTCTTGATGAGGCTCATGAA+AGG + chr4.2:79365563-79365582 MS.gene066611:CDS 40.0%
TTTGAACCTAAGACCTAGAC+AGG - chr4.2:79362564-79362583 None:intergenic 40.0%
! AATTTTGCTGCGAGAAGTTC+AGG + chr4.2:79364836-79364855 MS.gene066611:CDS 40.0%
! ACTCAAAGGATAAAGTGCCA+TGG - chr4.2:79367361-79367380 None:intergenic 40.0%
! AGTATGTGGTTGATACTGGA+AGG + chr4.2:79366700-79366719 MS.gene066611:CDS 40.0%
! CAATGATGAGCTCACACTTT+TGG + chr4.2:79367329-79367348 MS.gene066611:CDS 40.0%
! CATGATGGAGCAAGAGATAA+TGG + chr4.2:79364413-79364432 MS.gene066611:CDS 40.0%
! CTTTTCACGAGCAACTTTAG+AGG - chr4.2:79367634-79367653 None:intergenic 40.0%
! GGATGACCCAACATTTTACT+TGG - chr4.2:79368304-79368323 None:intergenic 40.0%
! GTATGTGGTTGATACTGGAA+GGG + chr4.2:79366701-79366720 MS.gene066611:CDS 40.0%
! GTCATTGCTATTACCACTGT+TGG + chr4.2:79365340-79365359 MS.gene066611:intron 40.0%
! TCGTAACTCAAGTCTGCTTT+TGG + chr4.2:79367437-79367456 MS.gene066611:CDS 40.0%
!! AGGATCATTCTAGAATGACG+AGG - chr4.2:79367384-79367403 None:intergenic 40.0%
!! GGAATACTAGTCTTTGTCAC+TGG + chr4.2:79366036-79366055 MS.gene066611:CDS 40.0%
!! GTTGAGAAAGTACCTGTTCA+TGG + chr4.2:79366903-79366922 MS.gene066611:CDS 40.0%
!! TACAAAGTGTTGTCAAACGG+TGG + chr4.2:79362804-79362823 MS.gene066611:intron 40.0%
!!! TCCTACCCTTTTTTGACCAA+AGG - chr4.2:79368501-79368520 None:intergenic 40.0%
AACCTTTGGACGCTTCTGTT+GGG + chr4.2:79368325-79368344 MS.gene066611:CDS 45.0%
AAGACTAGTATTCCCCCAGA+TGG - chr4.2:79366030-79366049 None:intergenic 45.0%
AATTCCAAGCCTTAACCACC+AGG - chr4.2:79362529-79362548 None:intergenic 45.0%
ACACCCACCAATTACTGAGA+AGG - chr4.2:79364045-79364064 None:intergenic 45.0%
ACACTGCAAGGCATATGCTA+TGG - chr4.2:79367685-79367704 None:intergenic 45.0%
AGAAATCAGAGGTTTGTGGG+GGG + chr4.2:79363241-79363260 MS.gene066611:intron 45.0%
AGAAGAGATTCATACGGTGC+AGG + chr4.2:79363772-79363791 MS.gene066611:CDS 45.0%
AGAAGGACAACACCATGAAC+AGG - chr4.2:79366918-79366937 None:intergenic 45.0%
AGCAATTCTCAGCTTCAAGC+AGG - chr4.2:79367284-79367303 None:intergenic 45.0%
AGGCTCAATAAAATCACGCG+TGG - chr4.2:79367143-79367162 None:intergenic 45.0%
ATTTCTTCGAAGACCGCTGA+TGG + chr4.2:79367993-79368012 MS.gene066611:CDS 45.0%
CAACAGAAGATGGTCCTTTC+AGG + chr4.2:79365775-79365794 MS.gene066611:CDS 45.0%
CAATAATACCACTGCGAGCA+TGG - chr4.2:79364665-79364684 None:intergenic 45.0%
CAATATCCTGTTTCCCTGAC+AGG - chr4.2:79363730-79363749 None:intergenic 45.0%
CACAACTGTAGGAGTAGTCA+AGG - chr4.2:79364340-79364359 None:intergenic 45.0%
CACCCACCAATTACTGAGAA+GGG - chr4.2:79364044-79364063 None:intergenic 45.0%
CATGCATGACTGATACCTAC+CGG - chr4.2:79368036-79368055 None:intergenic 45.0%
CATGCATGGAGTAACGAATG+TGG + chr4.2:79368187-79368206 MS.gene066611:CDS 45.0%
CATGCTCGCAGTGGTATTAT+TGG + chr4.2:79364663-79364682 MS.gene066611:CDS 45.0%
CATTAGCAATGTCGAGCTTC+GGG + chr4.2:79368370-79368389 MS.gene066611:CDS 45.0%
CCATTAGCAATGTCGAGCTT+CGG + chr4.2:79368369-79368388 MS.gene066611:CDS 45.0%
CCCGTTTCCTACTTCTCTTA+AGG + chr4.2:79367251-79367270 MS.gene066611:CDS 45.0%
CGAAGCTCGACATTGCTAAT+GGG - chr4.2:79368371-79368390 None:intergenic 45.0%
CTAGAATGACGAGGACTCAA+AGG - chr4.2:79367375-79367394 None:intergenic 45.0%
CTCGTAGGAACTTCTATCAC+AGG - chr4.2:79365910-79365929 None:intergenic 45.0%
CTGCCATGTTGAGAATAGTG+TGG + chr4.2:79368561-79368580 MS.gene066611:intron 45.0%
CTGTGATAGAAGTTCCTACG+AGG + chr4.2:79365908-79365927 MS.gene066611:CDS 45.0%
CTGTGCATCATAAAATGGCC+TGG - chr4.2:79368276-79368295 None:intergenic 45.0%
CTTCCCCACAAACTGAACAA+AGG - chr4.2:79364957-79364976 None:intergenic 45.0%
CTTTAGCAGCTCTATGGTGT+AGG + chr4.2:79362827-79362846 MS.gene066611:intron 45.0%
GAAAAGGAAAGGGATGGAAC+AGG + chr4.2:79363060-79363079 MS.gene066611:CDS 45.0%
GAAGCAGCCTTAAGAGAAGT+AGG - chr4.2:79367261-79367280 None:intergenic 45.0%
GAAGCTACGCAAAGCTTCAA+AGG + chr4.2:79366086-79366105 MS.gene066611:CDS 45.0%
GATTCATACGGTGCAGGTTA+AGG + chr4.2:79363778-79363797 MS.gene066611:CDS 45.0%
GCAATTCTCAGCTTCAAGCA+GGG - chr4.2:79367283-79367302 None:intergenic 45.0%
GCATTCTCAACTAGCCAAGT+TGG - chr4.2:79368215-79368234 None:intergenic 45.0%
GGCCTTTGTGTAGAAACATG+TGG - chr4.2:79364318-79364337 None:intergenic 45.0%
GGTACTTTCTCAACTTCAGC+AGG - chr4.2:79366897-79366916 None:intergenic 45.0%
GGTGCAGGTTAAGGAATTTG+AGG + chr4.2:79363787-79363806 MS.gene066611:CDS 45.0%
GTAACTGGAAATTGCCTCGT+AGG - chr4.2:79365925-79365944 None:intergenic 45.0%
GTAGGAACTTCTATCACAGG+TGG - chr4.2:79365907-79365926 None:intergenic 45.0%
GTATGTGGAGAAACAGGATG+TGG + chr4.2:79364465-79364484 MS.gene066611:CDS 45.0%
GTCATCGTATGTGGAGAAAC+AGG + chr4.2:79364459-79364478 MS.gene066611:CDS 45.0%
GTCTTAGGTTCAAATCACCC+TGG + chr4.2:79362570-79362589 MS.gene066611:intron 45.0%
TAACGAATGTGGACCCAACT+TGG + chr4.2:79368198-79368217 MS.gene066611:CDS 45.0%
TAGAGGATGTGGAACATGCT+TGG + chr4.2:79367868-79367887 MS.gene066611:CDS 45.0%
TAGGAACGTGGAAAGAAACG+TGG + chr4.2:79363162-79363181 MS.gene066611:intron 45.0%
TAGTAGTTAGTGAAGCCTGG+TGG + chr4.2:79362511-79362530 MS.gene066611:intron 45.0%
TCACAAGAAGTTGCCATCTG+GGG + chr4.2:79366014-79366033 MS.gene066611:CDS 45.0%
TCAGCGGTCTTCGAAGAAAT+TGG - chr4.2:79367993-79368012 None:intergenic 45.0%
TGCAAGACTTCACATCTGGA+AGG + chr4.2:79365866-79365885 MS.gene066611:CDS 45.0%
TGCATGTACATCTGAATCCG+AGG + chr4.2:79363748-79363767 MS.gene066611:CDS 45.0%
TGTGATCAGAACTCGCCAAA+AGG + chr4.2:79365624-79365643 MS.gene066611:CDS 45.0%
TTAGTGAAGCCTGGTGGTTA+AGG + chr4.2:79362517-79362536 MS.gene066611:intron 45.0%
TTCTCCACATACGATGACAC+TGG - chr4.2:79364457-79364476 None:intergenic 45.0%
! ATTGTAGGTTGAGACCGTGA+AGG + chr4.2:79363637-79363656 MS.gene066611:intron 45.0%
! CCCCTCCTGAAACTATTTTG+AGG + chr4.2:79368468-79368487 MS.gene066611:CDS 45.0%
! CTTCCTACGCTTTTCCTTCA+CGG - chr4.2:79363654-79363673 None:intergenic 45.0%
! CTTTTCTCTTGAACCTCTGG+TGG - chr4.2:79364375-79364394 None:intergenic 45.0%
! GCAAGCACTTTGAAGAGCTA+TGG + chr4.2:79368642-79368661 MS.gene066611:CDS 45.0%
! GCTGCTTTCGAAAACTTGTC+TGG + chr4.2:79366435-79366454 MS.gene066611:CDS 45.0%
! GGTTGATACTGGAAGGGAAA+AGG + chr4.2:79366707-79366726 MS.gene066611:CDS 45.0%
! GTCTTGGGTCTCAGTTTGTT+TGG + chr4.2:79363302-79363321 MS.gene066611:intron 45.0%
! TCTCCCTGCCAACTTTTGAT+TGG - chr4.2:79366506-79366525 None:intergenic 45.0%
! TTCATCAGGTTGCTTGTCAG+TGG - chr4.2:79363954-79363973 None:intergenic 45.0%
! TTTTGCTCCTGGCTTCAAGT+GGG + chr4.2:79362630-79362649 MS.gene066611:intron 45.0%
!! AACAGAAGCGTCCAAAGGTT+GGG - chr4.2:79368325-79368344 None:intergenic 45.0%
!! ACTGATTTGATCGGTGTGTG+TGG + chr4.2:79362895-79362914 MS.gene066611:intron 45.0%
!! CAAGAGTACTCATGGACTCA+TGG + chr4.2:79367840-79367859 MS.gene066611:CDS 45.0%
!! CACACTTTTGGGAAAAGCCA+TGG + chr4.2:79367341-79367360 MS.gene066611:CDS 45.0%
!! CAGGCCATTTTATGATGCAC+AGG + chr4.2:79368274-79368293 MS.gene066611:CDS 45.0%
!! TCAAGCAATATGTGCTGGCT+GGG + chr4.2:79367944-79367963 MS.gene066611:CDS 45.0%
!! TGGCATATGAGCTTGGTGTT+CGG + chr4.2:79364733-79364752 MS.gene066611:CDS 45.0%
AAAATGGCCTGGGATCTGTC+AGG - chr4.2:79368265-79368284 None:intergenic 50.0%
AAATGGCCTGGGATCTGTCA+GGG - chr4.2:79368264-79368283 None:intergenic 50.0%
AAGCGTGTGGCATATGAGCT+TGG + chr4.2:79364726-79364745 MS.gene066611:CDS 50.0%
ACTTCAGCAGGAGAGAACTC+AGG - chr4.2:79366885-79366904 None:intergenic 50.0%
AGGAAAGGGATGGAACAGGT+AGG + chr4.2:79363064-79363083 MS.gene066611:intron 50.0%
AGTTCTTGAGGGGACTCCAA+AGG - chr4.2:79363872-79363891 None:intergenic 50.0%
ATATGCCACACGCTTTGCTG+TGG - chr4.2:79364721-79364740 None:intergenic 50.0%
ATGAGCCTTTCCTCAACCAG+AGG - chr4.2:79367921-79367940 None:intergenic 50.0%
CAACCTTTGGACGCTTCTGT+TGG + chr4.2:79368324-79368343 MS.gene066611:CDS 50.0%
CAAGGAGAAGCAACTTCTGC+TGG + chr4.2:79363348-79363367 MS.gene066611:CDS 50.0%
CACAAGAAGTTGCCATCTGG+GGG + chr4.2:79366015-79366034 MS.gene066611:CDS 50.0%
CACACGATGATGACCTGTCA+GGG + chr4.2:79363714-79363733 MS.gene066611:CDS 50.0%
CACTGGACAAAGGGAAGTAG+AGG + chr4.2:79366053-79366072 MS.gene066611:CDS 50.0%
CCGAAGCTCGACATTGCTAA+TGG - chr4.2:79368372-79368391 None:intergenic 50.0%
CGAGTGCAAGACTTCACATC+TGG + chr4.2:79365862-79365881 MS.gene066611:CDS 50.0%
CGGTAGGTATCAGTCATGCA+TGG + chr4.2:79368034-79368053 MS.gene066611:CDS 50.0%
CTCGTCTCCCCTTCTTTGTT+TGG - chr4.2:79368152-79368171 None:intergenic 50.0%
CTGACAGGTCATCATCGTGT+GGG - chr4.2:79363715-79363734 None:intergenic 50.0%
GAAATCAGAGGTTTGTGGGG+GGG + chr4.2:79363242-79363261 MS.gene066611:intron 50.0%
GCATGTTTATAGGCCACCAG+AGG + chr4.2:79364359-79364378 MS.gene066611:CDS 50.0%
GGAAAGGGATGGAACAGGTA+GGG + chr4.2:79363065-79363084 MS.gene066611:intron 50.0%
GGAACTTCTATCACAGGTGG+AGG - chr4.2:79365904-79365923 None:intergenic 50.0%
GGAGAGACAATTTCTCGTGC+CGG + chr4.2:79368014-79368033 MS.gene066611:CDS 50.0%
TGAAACTGTCGCTGAACCTG+TGG + chr4.2:79363919-79363938 MS.gene066611:CDS 50.0%
TGAGCCTTTCCTCAACCAGA+GGG - chr4.2:79367920-79367939 None:intergenic 50.0%
TGATGACCTGTCAGGGAAAC+AGG + chr4.2:79363721-79363740 MS.gene066611:CDS 50.0%
TGTGAAGTCTTGCACTCGCA+AGG - chr4.2:79365860-79365879 None:intergenic 50.0%
TGTGCTCCTGTCTAGGTCTT+AGG + chr4.2:79362555-79362574 MS.gene066611:intron 50.0%
TGTGTTGGGTCAGTCCATAC+CGG + chr4.2:79362606-79362625 MS.gene066611:intron 50.0%
TGTTGGGTCATCCCAACCTT+TGG + chr4.2:79368311-79368330 MS.gene066611:CDS 50.0%
TTGAAGCCAGGAGCAAAACC+CGG - chr4.2:79362628-79362647 None:intergenic 50.0%
TTGCACGATGACTGCAGAAG+AGG - chr4.2:79363527-79363546 None:intergenic 50.0%
! AACAAAGAGTGCACCTGGAG+AGG - chr4.2:79366553-79366572 None:intergenic 50.0%
! AGACAATTTCTCGTGCCGGT+AGG + chr4.2:79368018-79368037 MS.gene066611:CDS 50.0%
! AGACCGTGAAGGAAAAGCGT+AGG + chr4.2:79363648-79363667 MS.gene066611:CDS 50.0%
! CGTGAAGGAAAAGCGTAGGA+AGG + chr4.2:79363652-79363671 MS.gene066611:CDS 50.0%
! GCGAAGAGAGCATACATGCA+TGG + chr4.2:79368173-79368192 MS.gene066611:CDS 50.0%
! GGTAGAACAAAGAGTGCACC+TGG - chr4.2:79366558-79366577 None:intergenic 50.0%
! GTCAAGCAATATGTGCTGGC+TGG + chr4.2:79367943-79367962 MS.gene066611:CDS 50.0%
! GTTTTGCTCCTGGCTTCAAG+TGG + chr4.2:79362629-79362648 MS.gene066611:intron 50.0%
! TGAGAAGTGTGCTCCTGTCT+AGG + chr4.2:79362548-79362567 MS.gene066611:intron 50.0%
!! CAACAGAAGCGTCCAAAGGT+TGG - chr4.2:79368326-79368345 None:intergenic 50.0%
!! TATGAGCTTGGTGTTCGGCT+AGG + chr4.2:79364738-79364757 MS.gene066611:CDS 50.0%
AATCCCACCGTTCACTAGCG+GGG - chr4.2:79362656-79362675 None:intergenic 55.0%
AATGGCCTGGGATCTGTCAG+GGG - chr4.2:79368263-79368282 None:intergenic 55.0%
ACACGAAGTTGAGCTGCAGC+AGG - chr4.2:79366597-79366616 None:intergenic 55.0%
AGAGCTGGAAGAACTGCTGC+GGG + chr4.2:79366813-79366832 MS.gene066611:CDS 55.0%
AGCAAGTTCCATGCTCGCAG+TGG + chr4.2:79364654-79364673 MS.gene066611:CDS 55.0%
AGCAGCAACACTGCCAACAG+TGG - chr4.2:79365356-79365375 None:intergenic 55.0%
AGGTCATCATCGTGTGGGAG+TGG - chr4.2:79363710-79363729 None:intergenic 55.0%
CAATCCCACCGTTCACTAGC+GGG - chr4.2:79362657-79362676 None:intergenic 55.0%
CAGAGCTGGAAGAACTGCTG+CGG + chr4.2:79366812-79366831 MS.gene066611:CDS 55.0%
CCAATCCCACCGTTCACTAG+CGG - chr4.2:79362658-79362677 None:intergenic 55.0%
CCACACGATGATGACCTGTC+AGG + chr4.2:79363713-79363732 MS.gene066611:CDS 55.0%
CCTGACAGGTCATCATCGTG+TGG - chr4.2:79363716-79363735 None:intergenic 55.0%
CTATCACAGGTGGAGGAGTG+TGG - chr4.2:79365897-79365916 None:intergenic 55.0%
CTATCCTCTCCCTCTGGTTG+AGG + chr4.2:79367908-79367927 MS.gene066611:CDS 55.0%
CTCTCCCTCTGGTTGAGGAA+AGG + chr4.2:79367913-79367932 MS.gene066611:CDS 55.0%
CTTTCCTCAACCAGAGGGAG+AGG - chr4.2:79367915-79367934 None:intergenic 55.0%
GAAGCCTGGTGGTTAAGGCT+TGG + chr4.2:79362522-79362541 MS.gene066611:intron 55.0%
GAAGTCTTGCACTCGCAAGG+TGG - chr4.2:79365857-79365876 None:intergenic 55.0%
GGGAAGTAGAGGACTTGTGC+AGG + chr4.2:79366064-79366083 MS.gene066611:CDS 55.0%
GGTCATCATCGTGTGGGAGT+GGG - chr4.2:79363709-79363728 None:intergenic 55.0%
GTGTTGGGTCAGTCCATACC+GGG + chr4.2:79362607-79362626 MS.gene066611:intron 55.0%
GTTCGGCTAGGAAAGGAGGT+TGG + chr4.2:79364750-79364769 MS.gene066611:CDS 55.0%
TACTGTACGCCCCGAGTTTC+TGG + chr4.2:79368097-79368116 MS.gene066611:CDS 55.0%
TCAGTGGAAACGTCAGCCAC+AGG - chr4.2:79363938-79363957 None:intergenic 55.0%
TCTTGCCACAGCAAAGCGTG+TGG + chr4.2:79364713-79364732 MS.gene066611:CDS 55.0%
TGGTGTTCGGCTAGGAAAGG+AGG + chr4.2:79364746-79364765 MS.gene066611:CDS 55.0%
TGTCACTCAACCACGTCGAG+TGG + chr4.2:79364686-79364705 MS.gene066611:CDS 55.0%
! TCCATACCGGGTTTTGCTCC+TGG + chr4.2:79362619-79362638 MS.gene066611:intron 55.0%
!! ATGTGCTGGCTGGGCAGATA+GGG + chr4.2:79367953-79367972 MS.gene066611:CDS 55.0%
!! CGGTGGCTTTAGCAGCTCTA+TGG + chr4.2:79362821-79362840 MS.gene066611:intron 55.0%
!! CTCCCAACAGAAGCGTCCAA+AGG - chr4.2:79368330-79368349 None:intergenic 55.0%
!! GCTTGGTGTTCGGCTAGGAA+AGG + chr4.2:79364743-79364762 MS.gene066611:CDS 55.0%
!! TATGTGCTGGCTGGGCAGAT+AGG + chr4.2:79367952-79367971 MS.gene066611:CDS 55.0%
AAGTGGGCCCCGCTAGTGAA+CGG + chr4.2:79362646-79362665 MS.gene066611:intron 60.0%
CAATGTCGAGCTTCGGGTGC+AGG + chr4.2:79368376-79368395 MS.gene066611:CDS 60.0%
CCGCTAGTGAACGGTGGGAT+TGG + chr4.2:79362655-79362674 MS.gene066611:intron 60.0%
GCAAGAACAGCCACTCGACG+TGG - chr4.2:79364699-79364718 None:intergenic 60.0%
GCATCTGCTGCTCAACGTGC+AGG + chr4.2:79366789-79366808 MS.gene066611:CDS 60.0%
GCCAGGAGCAAAACCCGGTA+TGG - chr4.2:79362623-79362642 None:intergenic 60.0%
TGCGCACTATCCTCTCCCTC+TGG + chr4.2:79367902-79367921 MS.gene066611:CDS 60.0%
GCTCAACGTGCAGGCAGAGC+TGG + chr4.2:79366798-79366817 MS.gene066611:CDS 65.0%
AGCGGGGCCCACTTGAAGCC+AGG - chr4.2:79362640-79362659 None:intergenic 70.0%
CTCCGCCCCTGACAGATCCC+AGG + chr4.2:79368255-79368274 MS.gene066611:CDS 70.0%
GGCCTGGGATCTGTCAGGGG+CGG - chr4.2:79368260-79368279 None:intergenic 70.0%
GGGCCCCGCTAGTGAACGGT+GGG + chr4.2:79362650-79362669 MS.gene066611:intron 70.0%
TGGGCCCCGCTAGTGAACGG+TGG + chr4.2:79362649-79362668 MS.gene066611:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 79362281 79368725 79362281 ID=MS.gene066611
chr4.2 mRNA 79362281 79368725 79362281 ID=MS.gene066611.t1;Parent=MS.gene066611
chr4.2 exon 79362281 79362321 79362281 ID=MS.gene066611.t1.exon1;Parent=MS.gene066611.t1
chr4.2 CDS 79362281 79362321 79362281 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79363009 79363081 79363009 ID=MS.gene066611.t1.exon2;Parent=MS.gene066611.t1
chr4.2 CDS 79363009 79363081 79363009 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79363165 79363251 79363165 ID=MS.gene066611.t1.exon3;Parent=MS.gene066611.t1
chr4.2 CDS 79363165 79363251 79363165 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79363343 79363392 79363343 ID=MS.gene066611.t1.exon4;Parent=MS.gene066611.t1
chr4.2 CDS 79363343 79363392 79363343 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79363496 79363556 79363496 ID=MS.gene066611.t1.exon5;Parent=MS.gene066611.t1
chr4.2 CDS 79363496 79363556 79363496 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79363644 79364033 79363644 ID=MS.gene066611.t1.exon6;Parent=MS.gene066611.t1
chr4.2 CDS 79363644 79364033 79363644 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79364264 79364509 79364264 ID=MS.gene066611.t1.exon7;Parent=MS.gene066611.t1
chr4.2 CDS 79364264 79364509 79364264 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79364627 79364857 79364627 ID=MS.gene066611.t1.exon8;Parent=MS.gene066611.t1
chr4.2 CDS 79364627 79364857 79364627 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79365529 79365645 79365529 ID=MS.gene066611.t1.exon9;Parent=MS.gene066611.t1
chr4.2 CDS 79365529 79365645 79365529 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79365763 79366962 79365763 ID=MS.gene066611.t1.exon10;Parent=MS.gene066611.t1
chr4.2 CDS 79365763 79366962 79365763 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79367240 79368546 79367240 ID=MS.gene066611.t1.exon11;Parent=MS.gene066611.t1
chr4.2 CDS 79367240 79368546 79367240 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
chr4.2 exon 79368635 79368725 79368635 ID=MS.gene066611.t1.exon12;Parent=MS.gene066611.t1
chr4.2 CDS 79368635 79368725 79368635 ID=cds.MS.gene066611.t1;Parent=MS.gene066611.t1
Gene Sequence

>MS.gene066611

ATGGAAAGTATTGGAGACCATGTTCAGATTAATTCTCAAAGGTAAATCACCTCACCCCTTTTCTTCAAAATAATGCATTGTCCGTGTAAATAATGTTTTACACATTCATCCAATCCAATCCAATCACATCTTATTGCACTGATATTCGTCAAGATATTTTAGGAACTAATATTACAAAGTGATTTATAGGAATGAGATATGATTTGATGTAGTGTTGAACAAATTGTTGATAGTAGTTAGTGAAGCCTGGTGGTTAAGGCTTGGAATTGAGAAGTGTGCTCCTGTCTAGGTCTTAGGTTCAAATCACCCTGGTGTCAACAATTCATGTGTTGGGTCAGTCCATACCGGGTTTTGCTCCTGGCTTCAAGTGGGCCCCGCTAGTGAACGGTGGGATTGGTCCCCATGTTTAGTCAGTATTGAAGCCGGATTTGAGTTAAAAATAAATAAATAAATAAATAAATTGTAGTTAGGTGAATTGAAATATTGCAAAAGGGACACTTCTAAATATAATGAGCGGAGGGTGTACAAAGTGTTGTCAAACGGTGGCTTTAGCAGCTCTATGGTGTAGGAGAATTTTAACAAACTGCTATGTTATGCAATCTGCGATTGACAACACTGATTTGATCGGTGTGTGTGGAAAACTTTTTCATATAGCAAGAAAAGACTGAATCAATATTTGGTTAATGCTATATATGATTCTTATAATTTTGTTTCTTTTTTGAGGTTAGTTATGGAGATGGTGATAGTAATGCACTAATTTTGCCAACTAAGAAGATGAAGAAAAGGAAAGGGATGGAACAGGTAGGGATAGTTTGAACATGGTTATGTGTTCTTTCAATTTGCATTTTTACGCATTTTGTGTGATCGAAATTCTGTTGTATTAGGAACGTGGAAAGAAACGTGGTAAAGTCCAATCAAATAAGAAACAGAAGTTGAGCAAAACTCAGAAAAAGAAGTTGAAGAAATCAGAGGTTTGTGGGGGGGACAAAAAAAGAATATGATTTTTGTTCTCTTCTTTTTTGTCTTGGGTCTCAGTTTGTTTGGTACATTTCATTTGTGTAGGATGACAAGGAGAAGCAACTTCTGCTGGAAAAAGCCCTTAAGACATTAAAGTAAGTTATTAGTTTGCTACAGTTTCTGCTTTGATGCTGTTTTCTATGGGAAGTGTTAAGTTGTTGAATAAAAAATGGAACTATTTTTATTTTATTGTTTCAGTGAGAACACGCTTCCTGAGTATGCATTTCCTCTTCTGCAGTCATCGTGCAATATCAATCGGGTTTGTATTGTCAAAAACAATTATACTTTTACAAAAATATTAAAAGTCTTAGGGTTGTTTGCCGACTGTTGCCATTGTATATTGTAGGTTGAGACCGTGAAGGAAAAGCGTAGGAAGGCTGTACATTTATTGAAAGAAGGATTGGAGGTCCCACTCCCACACGATGATGACCTGTCAGGGAAACAGGATATTGCATGTACATCTGAATCCGAGGAAGAAGAGATTCATACGGTGCAGGTTAAGGAATTTGAGGAAAATGATGTCATTCAACCTTTTAGAACCGAAAAAGAAATTTTATATACAACTACTGTTCCTTTGGAGTCCCCTCAAGAACTAGTTCACAAAAATGAAGTTGTGAATTATGAAACTGTCGCTGAACCTGTGGCTGACGTTTCCACTGACAAGCAACCTGATGAAATCAGAAGTTCTTCTCCCACCTCTTGTTCTATTGATGACATAAAAAGCAACAATTCAAAGGTATAATCCCTTCTCAGTAATTGGTGGGTGTGCACTGTGCAATCAAGATACAAGATTCAATTTCTTTTTTTCATTTGGAACGTTGAATTTATGACACTTATGAAGTAATAAGCTTTGAGAAAATATTTTTTCATATACTATTGTATACACACTATAGTATGTCTATAAGATTCCATATTGAGTATCTGCAACTTACATCAATGCTTTTTGGCATTTTTTACTTGATACAGGACAGGAAAGATGAGAACCCCTCCACGAACTTCAATGAATTGAGTAATCTTCCACATGTTTCTACACAAAGGCCCTTGACTACTCCTACAGTTGTGCATGTTTATAGGCCACCAGAGGTTCAAGAGAAAAGAAAGGATCTTCCTATTGTCATGATGGAGCAAGAGATAATGGAAGCTATAAACTACAATTCCAGTGTCATCGTATGTGGAGAAACAGGATGTGGTAAAACAACTCAGGTTCCTCAGGTTAGTATACCTTTTACTTGAGTATGTTATGATGGTATTGTCTATCATTCAAAACTAGCTTACATTTTGACTAATGATGACAATATAATAATTTATTATTATTTCAAAATTTATCAGTTTCTTTATGAAGCTGGCTATGGTTCAAGCAAGTTCCATGCTCGCAGTGGTATTATTGGTGTCACTCAACCACGTCGAGTGGCTGTTCTTGCCACAGCAAAGCGTGTGGCATATGAGCTTGGTGTTCGGCTAGGAAAGGAGGTTGGCTTTCAAGTTAGATACGATAAAAAAATTGGAGAAAATTGTTCTATCAAGTTTATGACTGATGGAATTTTGCTGCGAGAAGTTCAGGTTGTTATATTTTACCTTGCTATGTTTCCCTTTTGTTCTTTTTGGTGGTTCTTTTACGAGTTTGTAGCCTTATCTCAAATGATAAATAAGGAGAGACCTTTGTTCAGTTTGTGGGGAAGATAGAAACGTTTGTTCATATTTAGGATCCTTGTAGGTTGCATAAAGTCAATACAGGATAGAATCTTTGAATTTATCATTCCTTAATTAAGAACATGTATTTTTCGGCTCAATACTTGAGAACGTTATCATTTGTATGTGAATGAATGTGCATTTTAGGATTCTGTACATTTCATATCACATTAGATTGGAAACTGACAATGGATTGATTATGACTTTCCTCTTTCATTGGTTTATGTGTATGTACATTTTAGGATTCTGTATTTTTTTTTTTTTTATCACATTAGATTGGAAACTGACAATGGATTGATTACGATTTTTCTCTTTCATTTGTTCATTGGCTATTATTCATAGTAGTTGCAAGTGTCATTGCTATTACCACTGTTGGCAGTGTTGCTGCTGTTTATTACTTTGTGATGATATTGTTTATTCCACTCTATGCTCAGATATGTTGTTCTGATGTAATTGTTCTTACTTGTATTAGTTACACTAAACAAGATGAGTAACAGAATCATTTGTACTTTTGTTGTTTAATTGAATACCTCTGGATGCAGAATGATATTTTATTGAGGCGTTATTCTGTCCTAATTCTTGATGAGGCTCATGAAAGGAGCTTGAACACAGACATTCTGATAGGGATGCTCTCGCGTGTGATCAGAACTCGCCAAAAGGTAAATCAAAGTGTTTCATTATACCAATTTTTTTCAAATTAAGTTTAAATCCGTACTATCTTATTTTGTAATTTCCGTTCATTTAATACTCATGCCACCTACATTCTATTATGATAGATTTATGATGAACAACAGAAGATGGTCCTTTCAGGAGAAAGTATAAGTCCTGATAAAATGGTTTTTCCGTTAAAACTTGTGCTGATGAGTGCCACCTTGCGAGTGCAAGACTTCACATCTGGAAGGTTATTCCACACTCCTCCACCTGTGATAGAAGTTCCTACGAGGCAATTTCCAGTTACAGTGTATTTTGCAAAGAAAACCGAGATAACAGATTATGTTGGTGCTGCATATAAGAAGATCTTGGCAATTCACAAGAAGTTGCCATCTGGGGGAATACTAGTCTTTGTCACTGGACAAAGGGAAGTAGAGGACTTGTGCAGGAAGCTACGCAAAGCTTCAAAGGAGTTTATCATGAAAAAAGTTAAAGCATCTGTGGAAAATGATAGCAATGCGGTCAATGAAACAAGTTCTGTTGAGGGAATAAATATTAATGAGATTAATGAAGCATTTGAGATGCCTAGAAGTTCATCCATGCAACAAACTGATAGGTTTAGTGGTTATGATGAAGATGACAATAATTTTGATGAGAACGAATCTGATTCTTATGATTCAGAAACAGAGAGTGAATTGGAATTCAATGATGATGATAAAAATAATCACGACGGTTCAGAGGACAATAACAATATTGTGGATGTCTTAGGAAATGAAGGAAGTCTTGCTTCATTGAAGGCTGCTTTCGAAAACTTGTCTGGGCAAGCAACATTAAGTTCCTCGAATGTGAATACAGATGGTTTAGACCAATCAAAAGTTGGCAGGGAGAAAATAGCTAGAGAAAATCACAATTCCTCTCCAGGTGCACTCTTTGTTCTACCACTTTATGCTATGCTGCCTGCTGCAGCTCAACTTCGTGTATTTGATGGAGTCAAGGAGGGAGAGAGACTTGTTGTTGTTGCTACAAATGTTGCAGAAACATCTTTAACAATTCCAGGGATTAAGTATGTGGTTGATACTGGAAGGGAAAAGGTGAAGAACTATGATTCCTCTAATGGCATGGAGACATATGAAGTGAAATGGATAAGTAAGGCATCTGCTGCTCAACGTGCAGGCAGAGCTGGAAGAACTGCTGCGGGACACTGTTATCGTCTCTATTCTTCTGCAGCTTTTAGTAATGAATTTCCTGAGTTCTCTCCTGCTGAAGTTGAGAAAGTACCTGTTCATGGTGTTGTCCTTCTCTTGAAATCCATGCAAATTAAGAAGGTAAGTTTGATATTTTGATTTTACGAGTTTTCATTCCATCTACTTGTTTATATTGGATGTTATCATTAACTATAAGGCAAGGAAGTAGGTTTTCCACTATATATCACTAGCAATTTGGTTTATGGTGTTATATACTACTTATATTCTTAGTTTTGCTCGTGAACTGTCAACTTTGTTCCACGCGTGATTTTATTGAGCCTTTCTATTGTCTGATAATTTGATTTTCTCAATTCCTACTCAAACTGGATTTTTATATCAATGATTTTTTTTTATATAGGTTGCAAACTTCCCGTTTCCTACTTCTCTTAAGGCTGCTTCCCTGCTTGAAGCTGAGAATTGCTTGAGAGCTCTTGAAGCACTTGATAGCAATGATGAGCTCACACTTTTGGGAAAAGCCATGGCACTTTATCCTTTGAGTCCTCGTCATTCTAGAATGATCCTTACTGTTATAAAAAATACAAGGTACAAGCGTATTCGTAACTCAAGTCTGCTTTTGGCATATGCTGTTGCAGCTGCTGCTGCTTTGAGTTTGCCGAATCCTTTTGTAATGCAATATGAAGGAAATGATAGCAACAAAGATTCAGAAACTTCTGTGAAATCTAGAATGGGAGACAATGAGAACAATATTGATAAAACAGAAAAGACGAAGAGAAAGAAACTAAAACAGACCTCTAAAGTTGCTCGTGAAAAGTTTCGAATTGTCAGTAGTGATGCGCTAGCCATAGCATATGCCTTGCAGTGTTTTGAACATTCACAGAATTCAGTACAATTCTGTGAAGACAATGCATTGCATTTCAAAACCATGGATGAAATGTCCAAACTTAGACAGCAACTACTCAGATTGGTCTTTTTTCAGAGTGATAAAGGTGGTTTAGAACAAGAGTACTCATGGACTCATGGAACAATAGAGGATGTGGAACATGCTTGGCGAGTTTCTTCTGCGCACTATCCTCTCCCTCTGGTTGAGGAAAGGCTCATTTGTCAAGCAATATGTGCTGGCTGGGCAGATAGGGTTGCCAAACGTATTCCAATTTCTTCGAAGACCGCTGATGGAGAGACAATTTCTCGTGCCGGTAGGTATCAGTCATGCATGGTTGATGAAAGTATTTTCATTCATCGTTGGTCATCAGTTTCTACTGTACGCCCCGAGTTTCTGGTTTACAATGAGCTATTAGAGACAAAAAGACCAAACAAAGAAGGGGAGACGAGTGCGAAGAGAGCATACATGCATGGAGTAACGAATGTGGACCCAACTTGGCTAGTTGAGAATGCAAAGTCTTCATGCATCTTCTCTCCGCCCCTGACAGATCCCAGGCCATTTTATGATGCACAGGCTGACCAAGTAAAATGTTGGGTCATCCCAACCTTTGGACGCTTCTGTTGGGAGCTTCCTAAGCATTCAATACCCATTAGCAATGTCGAGCTTCGGGTGCAGGTGTTTGCCTATGCTTTACTTGAAGGTCAGGTGTGTCCATGTTTGAAATCAGTTCGAAAATACATGTCAGCCCCTCCTGAAACTATTTTGAGGAGAGAATCCTTTGGTCAAAAAAGGGTAGGAAATCTTATAAGCAAGTTAAATAGCAGGTTGATTGATAGCTCTGCCATGTTGAGAATAGTGTGGAAGCAGAATCCAAGAGAGTTATTTTCAGAAATTTTGGATTGGTTTCAACAGGGTTTTCGCAAGCACTTTGAAGAGCTATGGTTACAAATACTTGGCGAAGTGCTGCAAGAGACACAAGAACGACCTCTGCATAAAAGTTTAA
Protein sequence

>MS.gene066611.t1

MESIGDHVQINSQSYGDGDSNALILPTKKMKKRKGMEQERGKKRGKVQSNKKQKLSKTQKKKLKKSEDDKEKQLLLEKALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLEVPLPHDDDLSGKQDIACTSESEEEEIHTVQVKEFEENDVIQPFRTEKEILYTTTVPLESPQELVHKNEVVNYETVAEPVADVSTDKQPDEIRSSSPTSCSIDDIKSNNSKDRKDENPSTNFNELSNLPHVSTQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCGKTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKIYDEQQKMVLSGESISPDKMVFPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFAKKTEITDYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEFIMKKVKASVENDSNAVNETSSVEGININEINEAFEMPRSSSMQQTDRFSGYDEDDNNFDENESDSYDSETESELEFNDDDKNNHDGSEDNNNIVDVLGNEGSLASLKAAFENLSGQATLSSSNVNTDGLDQSKVGREKIARENHNSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSNDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKRIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSVKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQSDKGGLEQEYSWTHGTIEDVEHAWRVSSAHYPLPLVEERLICQAICAGWADRVAKRIPISSKTADGETISRAGRYQSCMVDESIFIHRWSSVSTVRPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVELRVQVFAYALLEGQVCPCLKSVRKYMSAPPETILRRESFGQKRVGNLISKLNSRVFASTLKSYGYKYLAKCCKRHKNDLCIKV