Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75013.t1 | XP_013468183.1 | 96.2 | 964 | 36 | 1 | 1 | 963 | 1 | 964 | 0.00E+00 | 1488 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75013.t1 | Q8R3N1 | 31.5 | 933 | 528 | 15 | 41 | 960 | 26 | 860 | 8.1e-52 | 207.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75013.t1 | A0A072VVU7 | 96.2 | 964 | 36 | 1 | 1 | 963 | 1 | 964 | 0.0e+00 | 1488.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050317 | MS.gene75013 | 0.809586 | 1.76E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75013.t1 | MTR_1g064300 | 97.095 | 964 | 27 | 1 | 1 | 963 | 1 | 964 | 0.0 | 1894 |
| MS.gene75013.t1 | MTR_1g442830 | 94.611 | 965 | 31 | 7 | 1 | 963 | 1 | 946 | 0.0 | 1818 |
| MS.gene75013.t1 | MTR_1g064300 | 97.625 | 758 | 17 | 1 | 207 | 963 | 1 | 758 | 0.0 | 1499 |
| MS.gene75013.t1 | MTR_1g064300 | 95.258 | 717 | 33 | 1 | 1 | 716 | 1 | 717 | 0.0 | 1371 |
| MS.gene75013.t1 | MTR_1g442820 | 95.026 | 583 | 25 | 3 | 207 | 788 | 1 | 580 | 0.0 | 1109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75013.t1 | AT1G69070 | 51.337 | 935 | 391 | 15 | 27 | 955 | 18 | 894 | 0.0 | 818 |
| MS.gene75013.t1 | AT1G69070 | 51.123 | 935 | 390 | 16 | 27 | 955 | 18 | 891 | 0.0 | 810 |
Find 176 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGTTCATCACTTCCTTCT+TGG | 0.196187 | 1.4:-52744172 | None:intergenic |
| TCTTCACTACTGACAGTTTC+AGG | 0.214470 | 1.4:+52749557 | MS.gene75013:CDS |
| CTGCCAGTTATATCATCTTA+TGG | 0.216501 | 1.4:+52749432 | MS.gene75013:intron |
| TGAAGAAACTATGACTAAAA+AGG | 0.225009 | 1.4:+52745278 | MS.gene75013:CDS |
| TGCTTTCATGGCTACTGCTT+CGG | 0.243552 | 1.4:-52741679 | None:intergenic |
| CTTCTTCTTCTGATTCTTGC+TGG | 0.246712 | 1.4:-52741634 | None:intergenic |
| TCCTCCAACGACTATCTTCT+TGG | 0.257256 | 1.4:-52745673 | None:intergenic |
| ATCAATAAACTCGGAAGATT+TGG | 0.263610 | 1.4:-52741868 | None:intergenic |
| GATGAAGGCCTTGATGATTT+TGG | 0.264737 | 1.4:+52741909 | MS.gene75013:CDS |
| TTCAAAGCTTTCATCTTGTT+TGG | 0.273827 | 1.4:-52744418 | None:intergenic |
| GCTTTCATGGCTACTGCTTC+GGG | 0.299044 | 1.4:-52741678 | None:intergenic |
| TCAAGTAGTAATCTCAAAAT+TGG | 0.299845 | 1.4:-52749957 | None:intergenic |
| TTCGGAGCTTCAATTATATA+AGG | 0.299927 | 1.4:-52745720 | None:intergenic |
| AGAATACTACTTTGAAAGAT+TGG | 0.304400 | 1.4:+52745442 | MS.gene75013:CDS |
| TTTGCAGATATTTCAGATTT+GGG | 0.309214 | 1.4:+52743882 | MS.gene75013:intron |
| ATATCACGGCCAGATGTTAT+TGG | 0.309858 | 1.4:-52747112 | None:intergenic |
| CTTTCAGCTCGCTCACTGTC+TGG | 0.314704 | 1.4:-52750286 | None:intergenic |
| GCACATATTGCAGCAAAGTA+TGG | 0.315156 | 1.4:-52746786 | None:intergenic |
| GCAGAAGTTGACAAGGTAAA+AGG | 0.319426 | 1.4:+52745570 | MS.gene75013:CDS |
| AAAGTTTGAATAAATACTAT+TGG | 0.330563 | 1.4:-52748113 | None:intergenic |
| TGAATAAATACTATTGGTTC+AGG | 0.334462 | 1.4:-52748107 | None:intergenic |
| CAAGAACATGCTTTCAAATC+TGG | 0.340841 | 1.4:+52750469 | MS.gene75013:CDS |
| TTCTTGATGCAGCTATGTTA+AGG | 0.341761 | 1.4:+52750249 | MS.gene75013:intron |
| TTCAGTAATTTGATTGGAAC+TGG | 0.357854 | 1.4:-52750107 | None:intergenic |
| ACGTGCCAACCCCATTCTTT+TGG | 0.359535 | 1.4:-52741790 | None:intergenic |
| AAGCATGTTCTTGCTCTTGA+AGG | 0.361044 | 1.4:-52750459 | None:intergenic |
| TGACCAACTTGTCAGACAAT+TGG | 0.376534 | 1.4:+52744632 | MS.gene75013:CDS |
| TTAGGATTCAGTAATTTGAT+TGG | 0.384079 | 1.4:-52750113 | None:intergenic |
| AAGGCAAGAGCTGAGAAGTA+TGG | 0.387698 | 1.4:+52750421 | MS.gene75013:CDS |
| GACAATGAATAATTCTGTTC+AGG | 0.394333 | 1.4:+52744504 | MS.gene75013:CDS |
| AGGTAAAAGGATTGAATGTT+GGG | 0.395632 | 1.4:+52745583 | MS.gene75013:CDS |
| AGTATCACAGGAGTCATAAC+TGG | 0.397195 | 1.4:-52747061 | None:intergenic |
| AAGGTAAAAGGATTGAATGT+TGG | 0.397569 | 1.4:+52745582 | MS.gene75013:CDS |
| AAACAAGATGAAAGCTTTGA+AGG | 0.398300 | 1.4:+52744420 | MS.gene75013:CDS |
| GGAAGTGTAAAGGGAGATAA+TGG | 0.398968 | 1.4:+52745639 | MS.gene75013:CDS |
| ATTACTGAATCCTAAGTTTG+AGG | 0.398976 | 1.4:+52750121 | MS.gene75013:CDS |
| AAATATGCCAAATGCATTGC+GGG | 0.400050 | 1.4:+52749995 | MS.gene75013:CDS |
| GTGAAGAATGGAGAGTCTTC+AGG | 0.403043 | 1.4:-52749541 | None:intergenic |
| GAGATCGCAGCGGGAACGTC+AGG | 0.403484 | 1.4:+52741944 | MS.gene75013:CDS |
| GATTCTGTTGGAAGTGTAAA+GGG | 0.404106 | 1.4:+52745630 | MS.gene75013:CDS |
| TCTTGATGCAGCTATGTTAA+GGG | 0.406379 | 1.4:+52750250 | MS.gene75013:intron |
| GATGAATTTGAAGGAATTGA+TGG | 0.414203 | 1.4:+52743533 | MS.gene75013:CDS |
| TTTGAAGGAATTGATGGTCT+TGG | 0.415825 | 1.4:+52743539 | MS.gene75013:CDS |
| GAGTTTATTGATAGAAGAAT+TGG | 0.416122 | 1.4:+52741879 | MS.gene75013:CDS |
| CGCTGTGTCTCTTGCGATTG+TGG | 0.416722 | 1.4:+52747005 | MS.gene75013:CDS |
| AGGTGAGGCGTGAAGCTAAA+GGG | 0.417578 | 1.4:+52750326 | MS.gene75013:CDS |
| GAATACTACTTTGAAAGATT+GGG | 0.420352 | 1.4:+52745443 | MS.gene75013:CDS |
| CTTCTGATTCTTGCTGGTGG+TGG | 0.420987 | 1.4:-52741628 | None:intergenic |
| TATCACGGCCAGATGTTATT+GGG | 0.421115 | 1.4:-52747111 | None:intergenic |
| TCATCACCAGAGAGAGATCT+TGG | 0.422739 | 1.4:-52745231 | None:intergenic |
| ACAAGTTGGTCATATTCATC+TGG | 0.423674 | 1.4:-52744621 | None:intergenic |
| TCCTCATTAATGCGCAATAG+TGG | 0.429661 | 1.4:-52749472 | None:intergenic |
| TCTGTACTCATCTCTATCAA+TGG | 0.429795 | 1.4:-52746759 | None:intergenic |
| CATAATTCTTCAAAGGTCTT+CGG | 0.431108 | 1.4:-52745738 | None:intergenic |
| TGAGAGAAGAGATGAGGAGG+AGG | 0.431745 | 1.4:+52745320 | MS.gene75013:CDS |
| GAGGCTGGTCTAGCTGACGG+TGG | 0.431971 | 1.4:+52743942 | MS.gene75013:CDS |
| AGGCATTGATATATCCTTGT+AGG | 0.432380 | 1.4:-52749899 | None:intergenic |
| GAAGATGATGATGAATTTGA+AGG | 0.433623 | 1.4:+52743524 | MS.gene75013:CDS |
| CGTAGGAAATTCGAAGTAAT+GGG | 0.434226 | 1.4:+52741747 | MS.gene75013:CDS |
| GACCAACTTGTCAGACAATT+GGG | 0.434843 | 1.4:+52744633 | MS.gene75013:CDS |
| AAATCTGGACAACTAGGAAA+AGG | 0.438682 | 1.4:+52750484 | MS.gene75013:CDS |
| AGATAAGGACTTCACTTCTC+TGG | 0.442591 | 1.4:+52744363 | MS.gene75013:CDS |
| TATATCATGCGAAAATTCTC+AGG | 0.447408 | 1.4:+52748163 | MS.gene75013:CDS |
| CATAACTGGATGTCGAAAAT+CGG | 0.447423 | 1.4:-52747047 | None:intergenic |
| GCAACCCATTCGAGTCAATC+TGG | 0.448516 | 1.4:+52741721 | MS.gene75013:CDS |
| GATGAAAGCTTTGAAGGCTC+TGG | 0.454907 | 1.4:+52744426 | MS.gene75013:CDS |
| ATGCAGAGTCCAGGGGAGGC+TGG | 0.457299 | 1.4:+52743927 | MS.gene75013:CDS |
| AAGAGAACGTCTAGAGGAGT+TGG | 0.457721 | 1.4:+52744719 | MS.gene75013:CDS |
| TGATATATGTTTACTTTCAG+TGG | 0.466596 | 1.4:-52748147 | None:intergenic |
| TCTTAATCATCAATCGGATT+CGG | 0.468845 | 1.4:+52745796 | MS.gene75013:CDS |
| TCAGCTAGACCAGCCTCCCC+TGG | 0.471953 | 1.4:-52743936 | None:intergenic |
| AGGCTGGTCTAGCTGACGGT+GGG | 0.474412 | 1.4:+52743943 | MS.gene75013:CDS |
| ACTTTGAAGATGAGATGCTT+GGG | 0.474875 | 1.4:+52743570 | MS.gene75013:CDS |
| GAACGAACTCAAGTTATCAT+AGG | 0.478056 | 1.4:-52749919 | None:intergenic |
| AAAGGAGATACCAAAAGAAT+GGG | 0.479733 | 1.4:+52741780 | MS.gene75013:CDS |
| AAGATAGCTTGTCTGCTAAA+CGG | 0.481368 | 1.4:+52744482 | MS.gene75013:CDS |
| GAAAGGAGATACCAAAAGAA+TGG | 0.481481 | 1.4:+52741779 | MS.gene75013:CDS |
| CTTTGAAGAATTATGTTCAC+TGG | 0.483060 | 1.4:+52745746 | MS.gene75013:CDS |
| CTACTTCTTGCTTGATGTGA+AGG | 0.483308 | 1.4:+52750375 | MS.gene75013:CDS |
| ACGTAGGAAATTCGAAGTAA+TGG | 0.485316 | 1.4:+52741746 | MS.gene75013:CDS |
| CTTGCTGGTGGTGGTTCCGT+TGG | 0.488486 | 1.4:-52741619 | None:intergenic |
| ACACTATCTTAATCATCAAT+CGG | 0.489425 | 1.4:+52745790 | MS.gene75013:CDS |
| ATCCCAATTGTCTGACAAGT+TGG | 0.491655 | 1.4:-52744635 | None:intergenic |
| GCAAAGAGAAATGATTCTGT+TGG | 0.491781 | 1.4:+52745618 | MS.gene75013:CDS |
| GGCATTGATATATCCTTGTA+GGG | 0.493842 | 1.4:-52749898 | None:intergenic |
| CAGATATTTCAGATTTGGGC+TGG | 0.496204 | 1.4:+52743886 | MS.gene75013:intron |
| GAAGAAGAAGAACAACAAGA+TGG | 0.497085 | 1.4:+52741653 | MS.gene75013:CDS |
| TCTTGAGAGAAGAGATGAGG+AGG | 0.501654 | 1.4:+52745317 | MS.gene75013:CDS |
| GACTTTGAAGATGAGATGCT+TGG | 0.502031 | 1.4:+52743569 | MS.gene75013:CDS |
| ATGCGTTGCCCAATAACATC+TGG | 0.502843 | 1.4:+52747103 | MS.gene75013:CDS |
| GCCACTATTGCGCATTAATG+AGG | 0.509019 | 1.4:+52749471 | MS.gene75013:CDS |
| GAGGTGAGGCGTGAAGCTAA+AGG | 0.509324 | 1.4:+52750325 | MS.gene75013:CDS |
| TGGTGAAGATTCTGATGATT+CGG | 0.509906 | 1.4:+52745365 | MS.gene75013:CDS |
| AGGTCTGAAGATTCTGATGA+AGG | 0.511371 | 1.4:+52745390 | MS.gene75013:CDS |
| GAGAAACCAAGATCTCTCTC+TGG | 0.511990 | 1.4:+52745225 | MS.gene75013:CDS |
| GCTCATGGTATGCAGAGTCC+AGG | 0.514901 | 1.4:+52743918 | MS.gene75013:CDS |
| GGGGAGGCTGGTCTAGCTGA+CGG | 0.515785 | 1.4:+52743939 | MS.gene75013:CDS |
| TGATTCTGTTGGAAGTGTAA+AGG | 0.516796 | 1.4:+52745629 | MS.gene75013:CDS |
| CTTCTTCTGATTCTTGCTGG+TGG | 0.517262 | 1.4:-52741631 | None:intergenic |
| CACTTCTCTGGCTCATTCCG+AGG | 0.518270 | 1.4:+52744375 | MS.gene75013:CDS |
| AATCTGGACAACTAGGAAAA+GGG | 0.524082 | 1.4:+52750485 | MS.gene75013:CDS |
| AAACTGTCAGTAGTGAAGAA+TGG | 0.525835 | 1.4:-52749553 | None:intergenic |
| AAGGAATTGATGGTCTTGGA+AGG | 0.527484 | 1.4:+52743543 | MS.gene75013:CDS |
| CACATATTGCAGCAAAGTAT+GGG | 0.528243 | 1.4:-52746785 | None:intergenic |
| GCTTTCAAATCTGGACAACT+AGG | 0.529239 | 1.4:+52750478 | MS.gene75013:CDS |
| GGCTGGCGTCATAATGCTCA+TGG | 0.529831 | 1.4:+52743903 | MS.gene75013:CDS |
| AGTCAGAGATAGCAAGGCCT+CGG | 0.531114 | 1.4:-52744392 | None:intergenic |
| AGAATTGGTGAGAATGATGA+AGG | 0.533838 | 1.4:+52741894 | MS.gene75013:CDS |
| AGAAAGGTCTTTAATGGAGA+AGG | 0.536130 | 1.4:+52750402 | MS.gene75013:CDS |
| AGAACGTCTAGAGGAGTTGG+AGG | 0.537126 | 1.4:+52744722 | MS.gene75013:CDS |
| GTGACCAGATTGACTCGAAT+GGG | 0.542975 | 1.4:-52741725 | None:intergenic |
| CTCATGGTATGCAGAGTCCA+GGG | 0.546926 | 1.4:+52743919 | MS.gene75013:CDS |
| GATATCAGTGCAGGTTCAGA+AGG | 0.548400 | 1.4:+52745483 | MS.gene75013:CDS |
| TCGCACATCAATAGTATCAC+AGG | 0.550865 | 1.4:-52747073 | None:intergenic |
| AGACACAGCGTCTTTGAAGA+AGG | 0.550949 | 1.4:-52746992 | None:intergenic |
| TGGATGAACATCATACTTTG+AGG | 0.551930 | 1.4:+52750057 | MS.gene75013:CDS |
| TCTGGCCGTGATATTGCCGT+TGG | 0.558685 | 1.4:+52747121 | MS.gene75013:CDS |
| TCTCTCTCTGGTGATGACCT+TGG | 0.559106 | 1.4:+52745237 | MS.gene75013:CDS |
| GATACCAAGAAGATAGTCGT+TGG | 0.560935 | 1.4:+52745669 | MS.gene75013:CDS |
| CTATCACAGAAAGTAGCAGC+TGG | 0.562254 | 1.4:+52746969 | MS.gene75013:intron |
| GACAACGGAAGAGATTGCTC+AGG | 0.562815 | 1.4:+52744692 | MS.gene75013:CDS |
| TGAAGAATTATGTTCACTGG+TGG | 0.563978 | 1.4:+52745749 | MS.gene75013:CDS |
| AAGAAGAAGAACAACAAGAT+GGG | 0.572092 | 1.4:+52741654 | MS.gene75013:CDS |
| TAGCTTTACCAAAATCATCA+AGG | 0.572384 | 1.4:-52741917 | None:intergenic |
| CCTGCTGGAAGGATTAGATA+AGG | 0.573153 | 1.4:+52744348 | MS.gene75013:CDS |
| AGATACCAAAAGAATGGGGT+TGG | 0.573911 | 1.4:+52741785 | MS.gene75013:CDS |
| CGTGACCAGATTGACTCGAA+TGG | 0.575204 | 1.4:-52741726 | None:intergenic |
| TCTCTTGCGATTGTGGTCCA+TGG | 0.576194 | 1.4:+52747012 | MS.gene75013:CDS |
| GATTCTTGAGAGAAGAGATG+AGG | 0.577765 | 1.4:+52745314 | MS.gene75013:CDS |
| GTTCTCTTGCTATTGAGAAG+AGG | 0.577774 | 1.4:+52741811 | MS.gene75013:CDS |
| GATGATGATGATATCAGTGC+AGG | 0.578213 | 1.4:+52745474 | MS.gene75013:CDS |
| GAAGATGATGATATTAGTGC+TGG | 0.580487 | 1.4:+52745507 | MS.gene75013:CDS |
| ACCTCTGTTGAAACCCTACA+AGG | 0.581709 | 1.4:+52749885 | MS.gene75013:CDS |
| TGGTTCAGTCAGAGATAGCA+AGG | 0.582246 | 1.4:-52744398 | None:intergenic |
| GCGGGATAAAATTAAAGATG+TGG | 0.582762 | 1.4:+52750013 | MS.gene75013:CDS |
| AGTTTCTTCATCGACAGAGA+AGG | 0.583142 | 1.4:-52745265 | None:intergenic |
| TTCACTCGAATCTTCAGCAG+CGG | 0.584454 | 1.4:-52745169 | None:intergenic |
| AACGGAAGAGATTGCTCAGG+AGG | 0.586845 | 1.4:+52744695 | MS.gene75013:CDS |
| GGAGGAAAGAGAACGTCTAG+AGG | 0.587808 | 1.4:+52744713 | MS.gene75013:CDS |
| AATTCTTCTATCAATAAACT+CGG | 0.589521 | 1.4:-52741877 | None:intergenic |
| CAAGAGCTGAGAAGTATGGA+AGG | 0.589540 | 1.4:+52750425 | MS.gene75013:CDS |
| CAGTGAACATAATTCTTCAA+AGG | 0.594264 | 1.4:-52745745 | None:intergenic |
| CCTTATCTAATCCTTCCAGC+AGG | 0.597560 | 1.4:-52744348 | None:intergenic |
| ATCGGAACATGGAAATACCA+TGG | 0.602060 | 1.4:-52747029 | None:intergenic |
| GTTGTCTTCAGCCTATCTGA+AGG | 0.603029 | 1.4:-52744675 | None:intergenic |
| TCCTTGTAGGGTTTCAACAG+AGG | 0.609177 | 1.4:-52749886 | None:intergenic |
| ACCAAGAAGATAGTCGTTGG+AGG | 0.610706 | 1.4:+52745672 | MS.gene75013:CDS |
| AAGAACCAACGGCAATATCA+CGG | 0.614085 | 1.4:-52747126 | None:intergenic |
| GGCTGGTCTAGCTGACGGTG+GGG | 0.614401 | 1.4:+52743944 | MS.gene75013:CDS |
| AAGAGCTGCAGAAGTTGACA+AGG | 0.614768 | 1.4:+52745563 | MS.gene75013:CDS |
| ACAGAGACATAAAACCAAGA+AGG | 0.615445 | 1.4:+52744158 | MS.gene75013:intron |
| AAAGATGAAGACCTGCTGGA+AGG | 0.616144 | 1.4:+52744337 | MS.gene75013:CDS |
| GGTGAGGCGTGAAGCTAAAG+GGG | 0.618945 | 1.4:+52750327 | MS.gene75013:CDS |
| TGCGTGCTCGTCCTTCAGAT+AGG | 0.623838 | 1.4:+52744664 | MS.gene75013:CDS |
| AGATTCTGATGAAGGATCTG+AGG | 0.625208 | 1.4:+52745398 | MS.gene75013:CDS |
| AGGAATTGATGGTCTTGGAA+GGG | 0.625979 | 1.4:+52743544 | MS.gene75013:CDS |
| AAAATATGCCAAATGCATTG+CGG | 0.628854 | 1.4:+52749994 | MS.gene75013:CDS |
| TCGAAGTAATGGGTCAGAAG+CGG | 0.631084 | 1.4:+52741757 | MS.gene75013:CDS |
| GAGAGAAGAGATGAGGAGGA+GGG | 0.637619 | 1.4:+52745321 | MS.gene75013:CDS |
| GGATGTCGAAAATCGGAACA+TGG | 0.637816 | 1.4:-52747040 | None:intergenic |
| TTCAGATAGGCTGAAGACAA+CGG | 0.639755 | 1.4:+52744677 | MS.gene75013:CDS |
| AAGATTCTGATGATTCGGAA+AGG | 0.644071 | 1.4:+52745370 | MS.gene75013:CDS |
| TCGAAACGCAGCATCGCCAA+CGG | 0.648466 | 1.4:+52741603 | MS.gene75013:CDS |
| TGAGCTGATTAAGTTGAAAG+TGG | 0.649315 | 1.4:+52750037 | MS.gene75013:CDS |
| TGAGGCGACCACTTCAAATG+CGG | 0.651913 | 1.4:+52750075 | MS.gene75013:CDS |
| GTAATGGGTCAGAAGCGGAA+AGG | 0.654267 | 1.4:+52741762 | MS.gene75013:CDS |
| TCTTCTAGTGAAGATGATGA+TGG | 0.654306 | 1.4:+52745345 | MS.gene75013:CDS |
| AGAACATAAGAAAGAACCAA+CGG | 0.656060 | 1.4:-52747137 | None:intergenic |
| TCGAGTCAATCTGGTCACGT+AGG | 0.664541 | 1.4:+52741730 | MS.gene75013:CDS |
| GAAGATGATGATGAAACTGA+TGG | 0.666421 | 1.4:+52743593 | MS.gene75013:CDS |
| CGACAGAGAAGGAATCGCCA+AGG | 0.671556 | 1.4:-52745254 | None:intergenic |
| TGGTATGCAGAGTCCAGGGG+AGG | 0.674017 | 1.4:+52743923 | MS.gene75013:CDS |
| CTTTGAAGATGAGATGCTTG+GGG | 0.680980 | 1.4:+52743571 | MS.gene75013:CDS |
| TCATGGTATGCAGAGTCCAG+GGG | 0.687360 | 1.4:+52743920 | MS.gene75013:CDS |
| AGAAGATGAAGATGATGACG+AGG | 0.691743 | 1.4:+52745533 | MS.gene75013:CDS |
| AAGGAGATACCAAAAGAATG+GGG | 0.729442 | 1.4:+52741781 | MS.gene75013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 52741591 | 52750525 | 52741591 | ID=MS.gene75013 |
| chr1.4 | mRNA | 52741591 | 52750525 | 52741591 | ID=MS.gene75013.t1;Parent=MS.gene75013 |
| chr1.4 | exon | 52741591 | 52741965 | 52741591 | ID=MS.gene75013.t1.exon1;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52741591 | 52741965 | 52741591 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52743479 | 52743614 | 52743479 | ID=MS.gene75013.t1.exon2;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52743479 | 52743614 | 52743479 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52743889 | 52743971 | 52743889 | ID=MS.gene75013.t1.exon3;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52743889 | 52743971 | 52743889 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52744162 | 52744221 | 52744162 | ID=MS.gene75013.t1.exon4;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52744162 | 52744221 | 52744162 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52744313 | 52744525 | 52744313 | ID=MS.gene75013.t1.exon5;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52744313 | 52744525 | 52744313 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52744615 | 52744743 | 52744615 | ID=MS.gene75013.t1.exon6;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52744615 | 52744743 | 52744615 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52745147 | 52745866 | 52745147 | ID=MS.gene75013.t1.exon7;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52745147 | 52745866 | 52745147 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52746672 | 52746864 | 52746672 | ID=MS.gene75013.t1.exon8;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52746672 | 52746864 | 52746672 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52746978 | 52747171 | 52746978 | ID=MS.gene75013.t1.exon9;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52746978 | 52747171 | 52746978 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52748080 | 52748184 | 52748080 | ID=MS.gene75013.t1.exon10;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52748080 | 52748184 | 52748080 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52749439 | 52749578 | 52749439 | ID=MS.gene75013.t1.exon11;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52749439 | 52749578 | 52749439 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52749869 | 52750147 | 52749869 | ID=MS.gene75013.t1.exon12;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52749869 | 52750147 | 52749869 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| chr1.4 | exon | 52750261 | 52750525 | 52750261 | ID=MS.gene75013.t1.exon13;Parent=MS.gene75013.t1 |
| chr1.4 | CDS | 52750261 | 52750525 | 52750261 | ID=cds.MS.gene75013.t1;Parent=MS.gene75013.t1 |
| Gene Sequence |
| Protein sequence |
