Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066964.t1 | XP_003619851.3 | 96.1 | 412 | 16 | 0 | 1 | 412 | 18 | 429 | 2.10E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066964.t1 | Q9LVI4 | 36.0 | 386 | 165 | 16 | 1 | 374 | 17 | 332 | 3.3e-34 | 147.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066964.t1 | A0A396HFY8 | 96.1 | 412 | 16 | 0 | 1 | 412 | 18 | 429 | 1.5e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene066964.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066964 | MS.gene79795 | PPI |
| MS.gene79795 | MS.gene066964 | PPI |
| MS.gene066964 | MS.gene042866 | PPI |
| MS.gene066964 | MS.gene82105 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066964.t1 | MTR_6g069870 | 95.696 | 395 | 17 | 0 | 18 | 412 | 1 | 395 | 0.0 | 771 |
| MS.gene066964.t1 | MTR_6g069870 | 95.349 | 344 | 16 | 0 | 18 | 361 | 1 | 344 | 0.0 | 669 |
| MS.gene066964.t1 | MTR_6g069870 | 95.046 | 323 | 16 | 0 | 18 | 340 | 1 | 323 | 0.0 | 622 |
| MS.gene066964.t1 | MTR_1g031930 | 30.670 | 388 | 161 | 14 | 16 | 377 | 31 | 336 | 1.13e-28 | 115 |
| MS.gene066964.t1 | MTR_1g031930 | 35.556 | 270 | 101 | 9 | 119 | 374 | 62 | 272 | 4.29e-24 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066964.t1 | AT3G17860 | 37.887 | 388 | 155 | 16 | 1 | 374 | 17 | 332 | 8.93e-47 | 164 |
| MS.gene066964.t1 | AT3G17860 | 38.441 | 372 | 143 | 16 | 17 | 374 | 20 | 319 | 2.89e-44 | 157 |
| MS.gene066964.t1 | AT3G17860 | 38.275 | 371 | 143 | 16 | 18 | 374 | 1 | 299 | 8.49e-44 | 155 |
| MS.gene066964.t1 | AT3G17860 | 38.275 | 371 | 143 | 16 | 18 | 374 | 1 | 299 | 8.49e-44 | 155 |
| MS.gene066964.t1 | AT1G48500 | 32.804 | 378 | 124 | 16 | 18 | 379 | 32 | 295 | 3.44e-31 | 121 |
| MS.gene066964.t1 | AT1G48500 | 32.312 | 359 | 114 | 15 | 18 | 361 | 2 | 246 | 6.95e-27 | 108 |
| MS.gene066964.t1 | AT1G48500 | 32.312 | 359 | 114 | 15 | 18 | 361 | 32 | 276 | 1.44e-26 | 108 |
| MS.gene066964.t1 | AT1G70700 | 41.593 | 113 | 58 | 4 | 108 | 220 | 58 | 162 | 2.62e-12 | 66.6 |
| MS.gene066964.t1 | AT1G70700 | 41.593 | 113 | 58 | 4 | 108 | 220 | 58 | 162 | 3.97e-12 | 66.6 |
| MS.gene066964.t1 | AT1G70700 | 41.593 | 113 | 58 | 4 | 108 | 220 | 58 | 162 | 5.89e-12 | 66.2 |
Find 94 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATACATGTTCTTCTTAA+AGG | 0.090775 | 6.4:+47827587 | None:intergenic |
| CTTGTTTCCTACTTGCTTTA+TGG | 0.147271 | 6.4:+47829513 | None:intergenic |
| TGTTCTTCTTAAAGGCAAAT+TGG | 0.268291 | 6.4:+47827595 | None:intergenic |
| CCTATTGTTGCTACTTCTAT+AGG | 0.270531 | 6.4:-47828410 | MS.gene066964:CDS |
| GTCTAATCATAAATCATTCT+TGG | 0.289760 | 6.4:-47830415 | MS.gene066964:CDS |
| CAATCTAATCATGTTATTAC+TGG | 0.306462 | 6.4:-47829406 | MS.gene066964:CDS |
| TTTGATGCAGTTAGGAGTTC+AGG | 0.316880 | 6.4:-47830588 | MS.gene066964:intron |
| GTTACAAACTCACAAACTTT+TGG | 0.317063 | 6.4:-47829364 | MS.gene066964:CDS |
| AATCTCTATTCCTTCCAAAA+AGG | 0.344054 | 6.4:-47828741 | MS.gene066964:CDS |
| GTTGGAAGCATCTTCTTTCA+TGG | 0.359919 | 6.4:+47833678 | None:intergenic |
| AGTTTCTCCATTGATTTCTC+TGG | 0.361158 | 6.4:-47827638 | MS.gene066964:CDS |
| AAATGCCCCTACTAACCATT+TGG | 0.365374 | 6.4:-47828438 | MS.gene066964:CDS |
| TTTGATGGAAGAACAGATAA+AGG | 0.367261 | 6.4:+47829322 | None:intergenic |
| GGAGATTCCAAATGGTTAGT+AGG | 0.395561 | 6.4:+47828431 | None:intergenic |
| GCTCAGTTGACCATATTCTA+TGG | 0.396208 | 6.4:-47829006 | MS.gene066964:CDS |
| AACTGTACCACCATAGAATA+TGG | 0.403758 | 6.4:+47828996 | None:intergenic |
| AGGTGTAGTACCATTGGATT+TGG | 0.407015 | 6.4:+47829029 | None:intergenic |
| TCTGATCCAGTGCTGCATTC+AGG | 0.408286 | 6.4:+47827668 | None:intergenic |
| GTTGCTACTTGAACCTCCCT+TGG | 0.419319 | 6.4:+47828496 | None:intergenic |
| CCTATAGAAGTAGCAACAAT+AGG | 0.423632 | 6.4:+47828410 | None:intergenic |
| GTCACAATAATAAAATCTTT+AGG | 0.424622 | 6.4:-47828467 | MS.gene066964:CDS |
| CAGTAATAACATGATTAGAT+TGG | 0.431253 | 6.4:+47829407 | None:intergenic |
| TTATCTGTTCTTCCATCAAA+AGG | 0.431556 | 6.4:-47829319 | MS.gene066964:CDS |
| TGAGAGGACTTGGCAATTGA+AGG | 0.441352 | 6.4:+47828587 | None:intergenic |
| GAAGTCATTGGGAGAGAACT+TGG | 0.446941 | 6.4:+47828536 | None:intergenic |
| GAACTTGCATGAGAAGTCAT+TGG | 0.447319 | 6.4:+47828524 | None:intergenic |
| ATCATGTTACTAGCTGGAAA+TGG | 0.450451 | 6.4:-47828782 | MS.gene066964:CDS |
| GCCTTTAAGAAGAACATGTA+TGG | 0.452229 | 6.4:-47827588 | MS.gene066964:CDS |
| CGCGAAAAGCATCGCTGACT+CGG | 0.452418 | 6.4:-47828075 | MS.gene066964:CDS |
| TAGGTCATTGTGAGAGGACT+TGG | 0.454376 | 6.4:+47828577 | None:intergenic |
| GCTTGGCAATGGTGAGGGAT+AGG | 0.455476 | 6.4:+47828697 | None:intergenic |
| TAGAATATGGTCAACTGAGC+AGG | 0.462120 | 6.4:+47829009 | None:intergenic |
| GAGATTCCAAATGGTTAGTA+GGG | 0.462551 | 6.4:+47828432 | None:intergenic |
| TTGCTACTTGAACCTCCCTT+GGG | 0.466052 | 6.4:+47828497 | None:intergenic |
| GAGGTCATTGGAAGAGGGCT+TGG | 0.466655 | 6.4:+47828680 | None:intergenic |
| GTACTTGCATGAGAGGTCAT+TGG | 0.470357 | 6.4:+47828668 | None:intergenic |
| TCTAATCATAAATCATTCTT+GGG | 0.475638 | 6.4:-47830414 | MS.gene066964:CDS |
| ATGGATCCAGTAGCTTCATC+TGG | 0.480372 | 6.4:-47830471 | MS.gene066964:CDS |
| AACTTGCATGAGAAGTCATT+GGG | 0.486290 | 6.4:+47828525 | None:intergenic |
| ATATATCCAGATGAAGCTAC+TGG | 0.486559 | 6.4:+47830465 | None:intergenic |
| AGAATAATACTCATGAAGAT+AGG | 0.490063 | 6.4:-47830509 | MS.gene066964:CDS |
| CTTGGCAATGGTGAGGGATA+GGG | 0.492080 | 6.4:+47828698 | None:intergenic |
| TTCTTGAATGACATGAATTG+AGG | 0.493289 | 6.4:+47830528 | None:intergenic |
| TTGCTACTTGAACCTCCCCT+TGG | 0.494100 | 6.4:+47828641 | None:intergenic |
| CTGAGCAGGTGTAGTACCAT+TGG | 0.495191 | 6.4:+47829023 | None:intergenic |
| GCATGAGAGGTCATTGGAAG+AGG | 0.495990 | 6.4:+47828674 | None:intergenic |
| CCATCAAAAGGTCCCATAGT+TGG | 0.499185 | 6.4:-47829307 | MS.gene066964:CDS |
| TAGGTCAGTAGAGCCAACTA+TGG | 0.501275 | 6.4:+47829294 | None:intergenic |
| GTCGCAATAATAAGATCCTT+AGG | 0.504594 | 6.4:-47828611 | MS.gene066964:CDS |
| ATCATTCTTGGGTGTGACAC+AGG | 0.505809 | 6.4:-47830403 | MS.gene066964:intron |
| CAACAATAGGAGATTCCAAA+TGG | 0.511822 | 6.4:+47828423 | None:intergenic |
| TAGGTCAAGAAACTGTGTTA+TGG | 0.516069 | 6.4:-47830490 | MS.gene066964:CDS |
| AACAGATAAAGGTGTGGCAG+AGG | 0.516274 | 6.4:+47829333 | None:intergenic |
| AAGGCAATCATGTTACTAGC+TGG | 0.519440 | 6.4:-47828788 | MS.gene066964:CDS |
| TCATGCAAGTTCTTATCCCA+AGG | 0.526316 | 6.4:-47828513 | MS.gene066964:CDS |
| CTTCTTAAAGGCAAATTGGT+GGG | 0.529876 | 6.4:+47827599 | None:intergenic |
| CTTGGCAATTGAAGGTCCTA+AGG | 0.532204 | 6.4:+47828595 | None:intergenic |
| TGGTTAGTAGGGGCATTTGA+AGG | 0.535343 | 6.4:+47828443 | None:intergenic |
| AAATCACCTGAATGCAGCAC+TGG | 0.539481 | 6.4:-47827674 | MS.gene066964:CDS |
| ACTTGAACCAGAGAAATCAA+TGG | 0.546674 | 6.4:+47827631 | None:intergenic |
| GCAAAGGTGAGAGATGAGAT+AGG | 0.557521 | 6.4:+47828558 | None:intergenic |
| AGAGGGCTTGGCAATGGTGA+GGG | 0.558559 | 6.4:+47828692 | None:intergenic |
| TGGTTGAGTACTTGCATGAG+AGG | 0.558968 | 6.4:+47828661 | None:intergenic |
| TCTTCTTAAAGGCAAATTGG+TGG | 0.560082 | 6.4:+47827598 | None:intergenic |
| CATGAGAGGTCATTGGAAGA+GGG | 0.576369 | 6.4:+47828675 | None:intergenic |
| CCTGGTTGAATCACATTGGT+AGG | 0.578004 | 6.4:+47828380 | None:intergenic |
| TGAATGACATGAATTGAGGA+AGG | 0.578633 | 6.4:+47830532 | None:intergenic |
| ATTGGAAGAGGGCTTGGCAA+TGG | 0.579330 | 6.4:+47828686 | None:intergenic |
| TAGTTGGCTCTACTGACCTA+AGG | 0.580437 | 6.4:-47829291 | MS.gene066964:intron |
| ATGAGATAGGTCATTGTGAG+AGG | 0.585630 | 6.4:+47828571 | None:intergenic |
| AAGAGGGCTTGGCAATGGTG+AGG | 0.587772 | 6.4:+47828691 | None:intergenic |
| CTTAAAGGCAAATTGGTGGG+TGG | 0.595542 | 6.4:+47827602 | None:intergenic |
| TCATGCAAGTACTCAACCAA+GGG | 0.597542 | 6.4:-47828657 | MS.gene066964:CDS |
| AGGTCAGTAGAGCCAACTAT+GGG | 0.597778 | 6.4:+47829295 | None:intergenic |
| CCTACCAATGTGATTCAACC+AGG | 0.605618 | 6.4:-47828380 | MS.gene066964:intron |
| TGTGCATCAGAACTTTGCAT+AGG | 0.606052 | 6.4:+47829472 | None:intergenic |
| CATGCAAGTTCTTATCCCAA+GGG | 0.608931 | 6.4:-47828512 | MS.gene066964:CDS |
| TGATGACATCTCTCCTGAGA+AGG | 0.609439 | 6.4:-47828965 | MS.gene066964:intron |
| CTCATGCAAGTACTCAACCA+AGG | 0.611643 | 6.4:-47828658 | MS.gene066964:CDS |
| AGGAATTGTTCCAAATCCAA+TGG | 0.614409 | 6.4:-47829039 | MS.gene066964:CDS |
| TATACCTGGTTGAATCACAT+TGG | 0.630846 | 6.4:+47828376 | None:intergenic |
| AATTTGGCCATAAAGCAAGT+AGG | 0.634556 | 6.4:-47829520 | MS.gene066964:CDS |
| TGTTATTACTGGAATCAACA+TGG | 0.635983 | 6.4:-47829395 | MS.gene066964:CDS |
| GCAATGGTGAGGGATAGGGT+TGG | 0.638300 | 6.4:+47828702 | None:intergenic |
| AAGCAAGTAGGAAACAAGCA+TGG | 0.639462 | 6.4:-47829508 | MS.gene066964:CDS |
| GCAAGTTCTTATCCCAAGGG+AGG | 0.641995 | 6.4:-47828509 | MS.gene066964:CDS |
| ATTGGGAGAGAACTTGGCAA+AGG | 0.651165 | 6.4:+47828542 | None:intergenic |
| CAGTTGACCATATTCTATGG+TGG | 0.670630 | 6.4:-47829003 | MS.gene066964:CDS |
| AGATTCCAAATGGTTAGTAG+GGG | 0.670933 | 6.4:+47828433 | None:intergenic |
| TTAGGAGTTCAGGAATGCAG+TGG | 0.686957 | 6.4:-47830578 | MS.gene066964:CDS |
| GCAAGTACTCAACCAAGGGG+AGG | 0.687330 | 6.4:-47828653 | MS.gene066964:CDS |
| TCCAACAAACCAAAAGACCA+AGG | 0.694197 | 6.4:-47833661 | MS.gene066964:intron |
| TGGAAGAACAGATAAAGGTG+TGG | 0.711636 | 6.4:+47829327 | None:intergenic |
| CATGCAAGTACTCAACCAAG+GGG | 0.756359 | 6.4:-47828656 | MS.gene066964:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | + | chr6.4:47827646-47827665 | None:intergenic | 0.0% |
| !! | AATTATAAATATATATAAAA+CGG | + | chr6.4:47832397-47832416 | None:intergenic | 0.0% |
| !! | ATAATTATATTATATGATGA+TGG | - | chr6.4:47829868-47829887 | MS.gene066964:intron | 10.0% |
| !! | ATTTCTCTAATAATAATATA+AGG | - | chr6.4:47828122-47828141 | MS.gene066964:intron | 10.0% |
| !! | TAATTATATAATATACTAGA+TGG | + | chr6.4:47829855-47829874 | None:intergenic | 10.0% |
| !! | TATCATTAAATTAACAAAAA+CGG | - | chr6.4:47827735-47827754 | MS.gene066964:intron | 10.0% |
| !!! | ATATAATCTTTTAAAAAACA+TGG | - | chr6.4:47830259-47830278 | MS.gene066964:intron | 10.0% |
| !!! | ATTTTTTTTAATGTTGATTT+AGG | - | chr6.4:47830614-47830633 | MS.gene066964:intron | 10.0% |
| !!! | TAAATGCTTATATTTTTTTT+TGG | - | chr6.4:47829370-47829389 | MS.gene066964:CDS | 10.0% |
| !!! | TTTATTTATTTATTTTGATG+GGG | - | chr6.4:47830382-47830401 | MS.gene066964:intron | 10.0% |
| !! | ATAAAATATTCATATACGAA+TGG | - | chr6.4:47829776-47829795 | MS.gene066964:intron | 15.0% |
| !! | ATTTATTATTTAATCATGCA+TGG | - | chr6.4:47827833-47827852 | MS.gene066964:intron | 15.0% |
| !! | CATGTTTAATATTAAATCTA+AGG | - | chr6.4:47829661-47829680 | MS.gene066964:intron | 15.0% |
| !! | CTTAGATTTAATATTAAACA+TGG | + | chr6.4:47829663-47829682 | None:intergenic | 15.0% |
| !! | GTATTGAGAAAAAAAAAAAT+TGG | - | chr6.4:47831066-47831085 | MS.gene066964:intron | 15.0% |
| !! | TTTATTATTTAATCATGCAT+GGG | - | chr6.4:47827834-47827853 | MS.gene066964:intron | 15.0% |
| !!! | AAAAAAAAATTGACAACTTT+TGG | - | chr6.4:47828539-47828558 | MS.gene066964:CDS | 15.0% |
| !!! | AAAATTGATTTTCACATATT+TGG | + | chr6.4:47831314-47831333 | None:intergenic | 15.0% |
| !!! | AAATTGTTATTTATTTCTCA+AGG | + | chr6.4:47829718-47829737 | None:intergenic | 15.0% |
| !!! | ATATATGCTAAAACTTTTTT+TGG | - | chr6.4:47831441-47831460 | MS.gene066964:intron | 15.0% |
| !!! | GAAAATCAATTTTATATCTT+TGG | - | chr6.4:47831321-47831340 | MS.gene066964:intron | 15.0% |
| !!! | GTTTTTAAATATAAATATCG+TGG | - | chr6.4:47829549-47829568 | MS.gene066964:intron | 15.0% |
| !!! | TAACTTGTAGATAATAATAA+AGG | - | chr6.4:47827934-47827953 | MS.gene066964:intron | 15.0% |
| !!! | TAATATTTTGTAGGAAAATT+TGG | - | chr6.4:47831714-47831733 | MS.gene066964:intron | 15.0% |
| !!! | TATAATGAAATTATCCTTTT+TGG | + | chr6.4:47832526-47832545 | None:intergenic | 15.0% |
| !!! | TATATTTTTTTTTGGTTAGA+AGG | - | chr6.4:47829378-47829397 | MS.gene066964:CDS | 15.0% |
| !!! | TTATTAGTTTATTGTTATCT+AGG | + | chr6.4:47830197-47830216 | None:intergenic | 15.0% |
| !!! | TTATTTTGATATATGAAACT+AGG | + | chr6.4:47830940-47830959 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTATGATACCTT+AGG | + | chr6.4:47831978-47831997 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTACTTACTTA+GGG | - | chr6.4:47833521-47833540 | MS.gene066964:intron | 15.0% |
| !!! | TTTTTTTTTTGTACTTACTT+AGG | - | chr6.4:47833520-47833539 | MS.gene066964:intron | 15.0% |
| !! | AAAAACATATTAAGTGATGA+AGG | + | chr6.4:47833245-47833264 | None:intergenic | 20.0% |
| !! | AAAATTGTGATATGATATTG+TGG | - | chr6.4:47832133-47832152 | MS.gene066964:intron | 20.0% |
| !! | AAACTAATAACAAAGTAACA+AGG | - | chr6.4:47830207-47830226 | MS.gene066964:intron | 20.0% |
| !! | AAATAATACTATGCTTCATA+AGG | - | chr6.4:47830098-47830117 | MS.gene066964:intron | 20.0% |
| !! | AATCTTTCAAATAACAAGTT+TGG | + | chr6.4:47830590-47830609 | None:intergenic | 20.0% |
| !! | AGTCTAAAAAATAACTATAG+AGG | - | chr6.4:47831237-47831256 | MS.gene066964:intron | 20.0% |
| !! | CCACAAATTATAAGATATAA+AGG | + | chr6.4:47831637-47831656 | None:intergenic | 20.0% |
| !! | CCTTTATATCTTATAATTTG+TGG | - | chr6.4:47831634-47831653 | MS.gene066964:intron | 20.0% |
| !! | GAAGCATAGTATTATTTAAT+GGG | + | chr6.4:47830095-47830114 | None:intergenic | 20.0% |
| !! | GTCACAATAATAAAATCTTT+AGG | - | chr6.4:47832783-47832802 | MS.gene066964:intron | 20.0% |
| !! | TACCAAACATCATAAAAATT+TGG | + | chr6.4:47831043-47831062 | None:intergenic | 20.0% |
| !! | TCTAATCATAAATCATTCTT+GGG | - | chr6.4:47830836-47830855 | MS.gene066964:intron | 20.0% |
| !! | TGAAGCATAGTATTATTTAA+TGG | + | chr6.4:47830096-47830115 | None:intergenic | 20.0% |
| !! | TTAATTCAATTATGTAGCAT+AGG | + | chr6.4:47828305-47828324 | None:intergenic | 20.0% |
| !! | TTATTATTTAATCATGCATG+GGG | - | chr6.4:47827835-47827854 | MS.gene066964:intron | 20.0% |
| !! | TTCAACATTTGTGATATTTA+TGG | - | chr6.4:47832963-47832982 | MS.gene066964:intron | 20.0% |
| !!! | AAATGAAATGGTTTTCTTTT+AGG | + | chr6.4:47829228-47829247 | None:intergenic | 20.0% |
| !!! | AAGTAAAATCCAAAAGTATA+TGG | + | chr6.4:47831380-47831399 | None:intergenic | 20.0% |
| !!! | ATATATTTTATTGCATAACG+TGG | - | chr6.4:47829464-47829483 | MS.gene066964:CDS | 20.0% |
| !!! | CTAATAAAACACATGTTTTT+TGG | - | chr6.4:47832061-47832080 | MS.gene066964:intron | 20.0% |
| !!! | GATTTTTATTTTCTATGACT+AGG | - | chr6.4:47832437-47832456 | MS.gene066964:intron | 20.0% |
| !!! | TAAAAATTGGTTCTAGTTAA+AGG | - | chr6.4:47831147-47831166 | MS.gene066964:intron | 20.0% |
| !!! | TACTTCTGTTAATATTTTGT+AGG | - | chr6.4:47831705-47831724 | MS.gene066964:intron | 20.0% |
| !!! | TATATCTTATAATTTGTGGA+AGG | - | chr6.4:47831638-47831657 | MS.gene066964:intron | 20.0% |
| !!! | TGTTTTCTTTTGTTTTCTAT+AGG | - | chr6.4:47832185-47832204 | MS.gene066964:intron | 20.0% |
| !!! | TTATTTCCTTTTTATCGATT+AGG | - | chr6.4:47828962-47828981 | MS.gene066964:intron | 20.0% |
| !!! | TTTTTTACAAGAAGTATAAC+TGG | - | chr6.4:47828829-47828848 | MS.gene066964:intron | 20.0% |
| !!! | TTTTTTCTTTTTGATGCAAT+GGG | + | chr6.4:47828732-47828751 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTTTGATGCAA+TGG | + | chr6.4:47828733-47828752 | None:intergenic | 20.0% |
| ! | AAAAAAAAGGAAAGCAGAAA+AGG | + | chr6.4:47827634-47827653 | None:intergenic | 25.0% |
| ! | AAAACTTTATATTAGCACAC+TGG | - | chr6.4:47828353-47828372 | MS.gene066964:intron | 25.0% |
| ! | AATAATATAAGGAAGAACCA+TGG | - | chr6.4:47828133-47828152 | MS.gene066964:intron | 25.0% |
| ! | AATTCAAACTTATATCCACA+TGG | + | chr6.4:47828700-47828719 | None:intergenic | 25.0% |
| ! | AGAATAATACTCATGAAGAT+AGG | - | chr6.4:47830741-47830760 | MS.gene066964:intron | 25.0% |
| ! | ATAATAAAGGTTATGCTATC+AGG | - | chr6.4:47827947-47827966 | MS.gene066964:intron | 25.0% |
| ! | ATTAAACTCAATGACCAAAT+TGG | - | chr6.4:47833428-47833447 | MS.gene066964:intron | 25.0% |
| ! | ATTGTTATCTAGGTAATAAC+TGG | + | chr6.4:47830187-47830206 | None:intergenic | 25.0% |
| ! | CAATCTAATCATGTTATTAC+TGG | - | chr6.4:47831844-47831863 | MS.gene066964:intron | 25.0% |
| ! | CACAATTGATATATAGTCAA+TGG | - | chr6.4:47828499-47828518 | MS.gene066964:CDS | 25.0% |
| ! | CAGTAATAACATGATTAGAT+TGG | + | chr6.4:47831846-47831865 | None:intergenic | 25.0% |
| ! | CATAAAAATTTGGTCAAACA+TGG | + | chr6.4:47831033-47831052 | None:intergenic | 25.0% |
| ! | CATAAACCTAATCGATAAAA+AGG | + | chr6.4:47828971-47828990 | None:intergenic | 25.0% |
| ! | CATCAAAATCAAGAAAATGA+AGG | + | chr6.4:47829491-47829510 | None:intergenic | 25.0% |
| ! | GAAAAAAGCAAAAGAACATA+AGG | + | chr6.4:47828180-47828199 | None:intergenic | 25.0% |
| ! | GAAAATAGAAAAAGATACCT+TGG | + | chr6.4:47827609-47827628 | None:intergenic | 25.0% |
| ! | GGATAAGTTCAAAAATTCTA+AGG | - | chr6.4:47828209-47828228 | MS.gene066964:intron | 25.0% |
| ! | GGTCAAAATAAAATAGATGT+GGG | - | chr6.4:47828769-47828788 | MS.gene066964:CDS | 25.0% |
| ! | GTCTAATCATAAATCATTCT+TGG | - | chr6.4:47830835-47830854 | MS.gene066964:intron | 25.0% |
| ! | TGGTTTCACAATCAATTATT+AGG | - | chr6.4:47831086-47831105 | MS.gene066964:intron | 25.0% |
| ! | TTCTTAAATTTGATGCAGTT+AGG | - | chr6.4:47830654-47830673 | MS.gene066964:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr6.4:47828624-47828643 | None:intergenic | 25.0% |
| !! | AAAAAAGTGTGTTGTGATAT+AGG | - | chr6.4:47828747-47828766 | MS.gene066964:CDS | 25.0% |
| !! | AAAAAGTGTGTTGTGATATA+GGG | - | chr6.4:47828748-47828767 | MS.gene066964:CDS | 25.0% |
| !! | AAAATCCAAAAGTATATGGT+TGG | + | chr6.4:47831376-47831395 | None:intergenic | 25.0% |
| !! | AAATCTTAACCAATGCTTTT+AGG | + | chr6.4:47827976-47827995 | None:intergenic | 25.0% |
| !! | AGAACCAATTTTTATCACTA+TGG | + | chr6.4:47831141-47831160 | None:intergenic | 25.0% |
| !! | ATAGAAGACACATTTTATGA+AGG | - | chr6.4:47829914-47829933 | MS.gene066964:intron | 25.0% |
| !! | ATGAAATTATCCTTTTTGGA+AGG | + | chr6.4:47832522-47832541 | None:intergenic | 25.0% |
| !! | ATTAAATCTAAGGTCTAACA+TGG | - | chr6.4:47829671-47829690 | MS.gene066964:intron | 25.0% |
| !! | CATTGACTATATATCAATTG+TGG | + | chr6.4:47828501-47828520 | None:intergenic | 25.0% |
| !! | GACCAAATTTTTATGATGTT+TGG | - | chr6.4:47831038-47831057 | MS.gene066964:intron | 25.0% |
| !! | TAAAGTATCTATCTATCACA+TGG | - | chr6.4:47828330-47828349 | MS.gene066964:intron | 25.0% |
| !! | TTAAATCTAAGGTCTAACAT+GGG | - | chr6.4:47829672-47829691 | MS.gene066964:intron | 25.0% |
| !! | TTATATAAGTTCTTTTGCGT+CGG | + | chr6.4:47833376-47833395 | None:intergenic | 25.0% |
| !! | TTTAGAGTCCTTTGTATATT+TGG | - | chr6.4:47830914-47830933 | MS.gene066964:intron | 25.0% |
| !! | TTTTAACAAGTCACATCTTA+AGG | + | chr6.4:47830042-47830061 | None:intergenic | 25.0% |
| !! | TTTTCTATACCTAATATCCA+AGG | + | chr6.4:47833271-47833290 | None:intergenic | 25.0% |
| !! | TTTTGAACTTATCCATCAAA+GGG | + | chr6.4:47828203-47828222 | None:intergenic | 25.0% |
| !! | TTTTTATGTTAATGACAAGC+TGG | - | chr6.4:47829737-47829756 | MS.gene066964:intron | 25.0% |
| !! | TTTTTGAACTTATCCATCAA+AGG | + | chr6.4:47828204-47828223 | None:intergenic | 25.0% |
| !!! | ACATCAACTTACTTTTATGA+AGG | - | chr6.4:47829976-47829995 | MS.gene066964:intron | 25.0% |
| !!! | ATGTGTTTTATTAGAAATGC+GGG | + | chr6.4:47832055-47832074 | None:intergenic | 25.0% |
| !!! | CATGTGTTTTATTAGAAATG+CGG | + | chr6.4:47832056-47832075 | None:intergenic | 25.0% |
| !!! | GATGGACTATGATTAAATAA+GGG | - | chr6.4:47829886-47829905 | MS.gene066964:intron | 25.0% |
| !!! | GATTTTTTGCTCATATAGTA+TGG | + | chr6.4:47833561-47833580 | None:intergenic | 25.0% |
| !!! | GCATCTTCTAAATAGTTTTA+TGG | - | chr6.4:47830316-47830335 | MS.gene066964:intron | 25.0% |
| !!! | TGATGGACTATGATTAAATA+AGG | - | chr6.4:47829885-47829904 | MS.gene066964:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr6.4:47828637-47828656 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGTTAGAAGGT+TGG | - | chr6.4:47829382-47829401 | MS.gene066964:CDS | 25.0% |
| AAACTAGGCCAAATATACAA+AGG | + | chr6.4:47830925-47830944 | None:intergenic | 30.0% | |
| AAATTCATTCTTCTCTTCCA+TGG | + | chr6.4:47828153-47828172 | None:intergenic | 30.0% | |
| AATCTCTATTCCTTCCAAAA+AGG | - | chr6.4:47832509-47832528 | MS.gene066964:intron | 30.0% | |
| ATTCAATTATGTAGCATAGG+AGG | + | chr6.4:47828302-47828321 | None:intergenic | 30.0% | |
| GAAATGCTAATAAGTGTCTT+TGG | + | chr6.4:47828107-47828126 | None:intergenic | 30.0% | |
| GGGTCAAAATAAAATAGATG+TGG | - | chr6.4:47828768-47828787 | MS.gene066964:CDS | 30.0% | |
| GGTTCCATAGTGATAAAAAT+TGG | - | chr6.4:47831134-47831153 | MS.gene066964:intron | 30.0% | |
| TATCATTACTCTAATCCATG+TGG | - | chr6.4:47828682-47828701 | MS.gene066964:CDS | 30.0% | |
| TATCTTCACTGCTGTAAAAA+AGG | - | chr6.4:47830548-47830567 | MS.gene066964:CDS | 30.0% | |
| TATTAGGTGAAACAACTACT+TGG | - | chr6.4:47831102-47831121 | MS.gene066964:intron | 30.0% | |
| TCAGCTCATGTAAAATCTTA+AGG | - | chr6.4:47829086-47829105 | MS.gene066964:intron | 30.0% | |
| TCCATACATGTTCTTCTTAA+AGG | + | chr6.4:47833666-47833685 | None:intergenic | 30.0% | |
| TGATATGATATTGTGGAGTA+GGG | - | chr6.4:47832140-47832159 | MS.gene066964:intron | 30.0% | |
| TGCTATTATGTTAGCCAATT+TGG | + | chr6.4:47833445-47833464 | None:intergenic | 30.0% | |
| TGTTCTTCTTAAAGGCAAAT+TGG | + | chr6.4:47833658-47833677 | None:intergenic | 30.0% | |
| TGTTGGTGCAAAATATTTCA+TGG | + | chr6.4:47827676-47827695 | None:intergenic | 30.0% | |
| TGTTTGATGTGTGGTATTTA+TGG | - | chr6.4:47828412-47828431 | MS.gene066964:CDS | 30.0% | |
| TTAAATTTATATGCCGTACC+TGG | - | chr6.4:47830161-47830180 | MS.gene066964:intron | 30.0% | |
| TTATCTGTTCTTCCATCAAA+AGG | - | chr6.4:47831931-47831950 | MS.gene066964:intron | 30.0% | |
| TTCTTGAATGACATGAATTG+AGG | + | chr6.4:47830725-47830744 | None:intergenic | 30.0% | |
| TTTGAACCATAAGTATGACA+TGG | + | chr6.4:47828387-47828406 | None:intergenic | 30.0% | |
| TTTGAACTTATCCATCAAAG+GGG | + | chr6.4:47828202-47828221 | None:intergenic | 30.0% | |
| TTTGATGGAAGAACAGATAA+AGG | + | chr6.4:47831931-47831950 | None:intergenic | 30.0% | |
| ! | AATTTTTATTCCTCCAAGTG+TGG | - | chr6.4:47831348-47831367 | MS.gene066964:intron | 30.0% |
| ! | GTTACAAACTCACAAACTTT+TGG | - | chr6.4:47831886-47831905 | MS.gene066964:intron | 30.0% |
| ! | TATTTTCTATGACTAGGCTA+AGG | - | chr6.4:47832443-47832462 | MS.gene066964:intron | 30.0% |
| !! | AAAAAGATACCTTGGTCTTT+TGG | + | chr6.4:47827601-47827620 | None:intergenic | 30.0% |
| !! | CAAAAATTCTAAGGTTTCGT+AGG | - | chr6.4:47828218-47828237 | MS.gene066964:intron | 30.0% |
| !! | CTTAATATGTTTTTGAGCCT+TGG | - | chr6.4:47833251-47833270 | MS.gene066964:intron | 30.0% |
| !! | CTTTTAAAAAACATGGACTC+TGG | - | chr6.4:47830266-47830285 | MS.gene066964:intron | 30.0% |
| !! | TGTGTTTTATTAGAAATGCG+GGG | + | chr6.4:47832054-47832073 | None:intergenic | 30.0% |
| !!! | CTTTTGTTTTCTATAGGAGT+AGG | - | chr6.4:47832191-47832210 | MS.gene066964:intron | 30.0% |
| !!! | GTTTTTTGGAAGTGTACTTA+CGG | - | chr6.4:47832075-47832094 | MS.gene066964:intron | 30.0% |
| !!! | TCTTGTGATGTGATTTTTTG+TGG | - | chr6.4:47833488-47833507 | MS.gene066964:intron | 30.0% |
| !!! | TGTTTTGTTGTGTTTCTAGT+TGG | - | chr6.4:47833141-47833160 | MS.gene066964:intron | 30.0% |
| AACTGTACCACCATAGAATA+TGG | + | chr6.4:47832257-47832276 | None:intergenic | 35.0% | |
| AACTTGCATGAGAAGTCATT+GGG | + | chr6.4:47832728-47832747 | None:intergenic | 35.0% | |
| AAGAACATTGAGTGCTTGTT+AGG | - | chr6.4:47830973-47830992 | MS.gene066964:intron | 35.0% | |
| AAGGATATACTCTTTCAACG+TGG | + | chr6.4:47831618-47831637 | None:intergenic | 35.0% | |
| AATTTGGCCATAAAGCAAGT+AGG | - | chr6.4:47831730-47831749 | MS.gene066964:intron | 35.0% | |
| ACTTGAACCAGAGAAATCAA+TGG | + | chr6.4:47833622-47833641 | None:intergenic | 35.0% | |
| AGAGAGAAAAAGAAAGAGAG+AGG | + | chr6.4:47828601-47828620 | None:intergenic | 35.0% | |
| AGATTCCAAATGGTTAGTAG+GGG | + | chr6.4:47832820-47832839 | None:intergenic | 35.0% | |
| AGGAATTGTTCCAAATCCAA+TGG | - | chr6.4:47832211-47832230 | MS.gene066964:intron | 35.0% | |
| AGGATATACTCTTTCAACGT+GGG | + | chr6.4:47831617-47831636 | None:intergenic | 35.0% | |
| ATATATCCAGATGAAGCTAC+TGG | + | chr6.4:47830788-47830807 | None:intergenic | 35.0% | |
| ATCATGTTACTAGCTGGAAA+TGG | - | chr6.4:47832468-47832487 | MS.gene066964:intron | 35.0% | |
| CAACAATAGGAGATTCCAAA+TGG | + | chr6.4:47832830-47832849 | None:intergenic | 35.0% | |
| CCAGGTATATTGTGTCTATA+TGG | - | chr6.4:47832888-47832907 | MS.gene066964:intron | 35.0% | |
| CCATATAGACACAATATACC+TGG | + | chr6.4:47832891-47832910 | None:intergenic | 35.0% | |
| CCTATAGAAGTAGCAACAAT+AGG | + | chr6.4:47832843-47832862 | None:intergenic | 35.0% | |
| CTTCTTAAAGGCAAATTGGT+GGG | + | chr6.4:47833654-47833673 | None:intergenic | 35.0% | |
| CTTGTTTCCTACTTGCTTTA+TGG | + | chr6.4:47831740-47831759 | None:intergenic | 35.0% | |
| GAGATTCCAAATGGTTAGTA+GGG | + | chr6.4:47832821-47832840 | None:intergenic | 35.0% | |
| GGTAAAAAAGTTACCTTCTC+AGG | + | chr6.4:47832301-47832320 | None:intergenic | 35.0% | |
| GTCGCAATAATAAGATCCTT+AGG | - | chr6.4:47832639-47832658 | MS.gene066964:intron | 35.0% | |
| GTGATATGATATTGTGGAGT+AGG | - | chr6.4:47832139-47832158 | MS.gene066964:intron | 35.0% | |
| TAGACTCTCATTCATACATC+AGG | + | chr6.4:47829577-47829596 | None:intergenic | 35.0% | |
| TAGGTCAAGAAACTGTGTTA+TGG | - | chr6.4:47830760-47830779 | MS.gene066964:intron | 35.0% | |
| TATACCTGGTTGAATCACAT+TGG | + | chr6.4:47832877-47832896 | None:intergenic | 35.0% | |
| TATGTTAGAAAACGTGCTCT+TGG | - | chr6.4:47829415-47829434 | MS.gene066964:CDS | 35.0% | |
| TCTTCTTAAAGGCAAATTGG+TGG | + | chr6.4:47833655-47833674 | None:intergenic | 35.0% | |
| TGAATGACATGAATTGAGGA+AGG | + | chr6.4:47830721-47830740 | None:intergenic | 35.0% | |
| TTTATGGTGAAATCGCATAC+CGG | - | chr6.4:47832979-47832998 | MS.gene066964:intron | 35.0% | |
| TTTCACATCCCCATAACAAT+AGG | + | chr6.4:47827699-47827718 | None:intergenic | 35.0% | |
| ! | ATATTAGCACACTGGCTATA+GGG | - | chr6.4:47828361-47828380 | MS.gene066964:intron | 35.0% |
| ! | CCTATTGTTGCTACTTCTAT+AGG | - | chr6.4:47832840-47832859 | MS.gene066964:intron | 35.0% |
| ! | GCCTTTAAGAAGAACATGTA+TGG | - | chr6.4:47833662-47833681 | MS.gene066964:CDS | 35.0% |
| ! | TATATTAGCACACTGGCTAT+AGG | - | chr6.4:47828360-47828379 | MS.gene066964:intron | 35.0% |
| ! | TCGTAGGAAGAACTTGTTTA+AGG | - | chr6.4:47828234-47828253 | MS.gene066964:intron | 35.0% |
| ! | TGGAACCAACCATATACTTT+TGG | - | chr6.4:47831368-47831387 | MS.gene066964:intron | 35.0% |
| ! | TTATTTTCTGCAATCTGCGA+TGG | - | chr6.4:47832357-47832376 | MS.gene066964:intron | 35.0% |
| ! | TTTCTTTTTGATGCAATGGG+TGG | + | chr6.4:47828729-47828748 | None:intergenic | 35.0% |
| ! | TTTTGTTACAAGCCACTCTT+TGG | + | chr6.4:47830072-47830091 | None:intergenic | 35.0% |
| !! | AGTTTCTCCATTGATTTCTC+TGG | - | chr6.4:47833612-47833631 | MS.gene066964:intron | 35.0% |
| !! | CAAAGTTGATGTTTGATGTG+TGG | - | chr6.4:47828403-47828422 | MS.gene066964:CDS | 35.0% |
| !! | GCAGTGGTCATTTTCAAATA+AGG | - | chr6.4:47830688-47830707 | MS.gene066964:intron | 35.0% |
| !! | GTTTTTGAGCCTTGGATATT+AGG | - | chr6.4:47833259-47833278 | MS.gene066964:intron | 35.0% |
| !! | TCAAAGTTGATGTGTGAATG+TGG | - | chr6.4:47828436-47828455 | MS.gene066964:CDS | 35.0% |
| !! | TGAGTGCTTGTTAGGTTTTA+AGG | - | chr6.4:47830981-47831000 | MS.gene066964:intron | 35.0% |
| !!! | TTTGCTTTTTTCCCCTTTGA+TGG | - | chr6.4:47828188-47828207 | MS.gene066964:intron | 35.0% |
| AAATGCCCCTACTAACCATT+TGG | - | chr6.4:47832812-47832831 | MS.gene066964:intron | 40.0% | |
| AAATGCGGGGTGGAAAATAT+TGG | + | chr6.4:47832041-47832060 | None:intergenic | 40.0% | |
| AAGCAAGTAGGAAACAAGCA+TGG | - | chr6.4:47831742-47831761 | MS.gene066964:intron | 40.0% | |
| AAGGCAATCATGTTACTAGC+TGG | - | chr6.4:47832462-47832481 | MS.gene066964:intron | 40.0% | |
| AGGTGTAGTACCATTGGATT+TGG | + | chr6.4:47832224-47832243 | None:intergenic | 40.0% | |
| ATACTCTTTCAACGTGGGTT+AGG | + | chr6.4:47831612-47831631 | None:intergenic | 40.0% | |
| ATAGGGCCATGTCATACTTA+TGG | - | chr6.4:47828378-47828397 | MS.gene066964:intron | 40.0% | |
| ATCCCCATAACAATAGGTGT+TGG | + | chr6.4:47827693-47827712 | None:intergenic | 40.0% | |
| ATGAGATAGGTCATTGTGAG+AGG | + | chr6.4:47832682-47832701 | None:intergenic | 40.0% | |
| CACCAACACCTATTGTTATG+GGG | - | chr6.4:47827688-47827707 | MS.gene066964:CDS | 40.0% | |
| CAGTTGACCATATTCTATGG+TGG | - | chr6.4:47832247-47832266 | MS.gene066964:intron | 40.0% | |
| CATGCAAGTTCTTATCCCAA+GGG | - | chr6.4:47832738-47832757 | MS.gene066964:intron | 40.0% | |
| CCACTGCGCTATTAAGTTTA+GGG | + | chr6.4:47832322-47832341 | None:intergenic | 40.0% | |
| CTTGTCAGTGTGTTGTAAGA+TGG | - | chr6.4:47828472-47828491 | MS.gene066964:CDS | 40.0% | |
| GAACTTGCATGAGAAGTCAT+TGG | + | chr6.4:47832729-47832748 | None:intergenic | 40.0% | |
| GCACCAACACCTATTGTTAT+GGG | - | chr6.4:47827687-47827706 | MS.gene066964:CDS | 40.0% | |
| GCACTCAATGTTCTTCAACA+AGG | + | chr6.4:47830968-47830987 | None:intergenic | 40.0% | |
| GCTCAGTTGACCATATTCTA+TGG | - | chr6.4:47832244-47832263 | MS.gene066964:intron | 40.0% | |
| GGAGATTCCAAATGGTTAGT+AGG | + | chr6.4:47832822-47832841 | None:intergenic | 40.0% | |
| GTTGATGTGTGAATGTGGTA+GGG | - | chr6.4:47828441-47828460 | MS.gene066964:CDS | 40.0% | |
| TAAAAGACACCACCAAAGAG+TGG | - | chr6.4:47830057-47830076 | MS.gene066964:intron | 40.0% | |
| TAGAATATGGTCAACTGAGC+AGG | + | chr6.4:47832244-47832263 | None:intergenic | 40.0% | |
| TATCTAGGTAATAACTGGCC+AGG | + | chr6.4:47830182-47830201 | None:intergenic | 40.0% | |
| TCATGCAAGTACTCAACCAA+GGG | - | chr6.4:47832593-47832612 | MS.gene066964:intron | 40.0% | |
| TCATGCAAGTTCTTATCCCA+AGG | - | chr6.4:47832737-47832756 | MS.gene066964:intron | 40.0% | |
| TCCAACAAACCAAAAGACCA+AGG | - | chr6.4:47827589-47827608 | MS.gene066964:CDS | 40.0% | |
| TCCACTGCGCTATTAAGTTT+AGG | + | chr6.4:47832323-47832342 | None:intergenic | 40.0% | |
| TGATGGGGTAGATGAAGTAT+AGG | - | chr6.4:47830397-47830416 | MS.gene066964:intron | 40.0% | |
| TGCACCAACACCTATTGTTA+TGG | - | chr6.4:47827686-47827705 | MS.gene066964:CDS | 40.0% | |
| TGGAAGAACAGATAAAGGTG+TGG | + | chr6.4:47831926-47831945 | None:intergenic | 40.0% | |
| TGTGCATCAGAACTTTGCAT+AGG | + | chr6.4:47831781-47831800 | None:intergenic | 40.0% | |
| TTTAATGTGTCACCTAGACG+CGG | - | chr6.4:47833312-47833331 | MS.gene066964:intron | 40.0% | |
| TTTGATGCAGTTAGGAGTTC+AGG | - | chr6.4:47830662-47830681 | MS.gene066964:intron | 40.0% | |
| ! | AGTTGATGTGTGAATGTGGT+AGG | - | chr6.4:47828440-47828459 | MS.gene066964:CDS | 40.0% |
| ! | ATACCGGTTAACGAATAGAG+AGG | - | chr6.4:47832995-47833014 | MS.gene066964:intron | 40.0% |
| ! | ATCAGGTGTCCTAAAAGCAT+TGG | - | chr6.4:47827964-47827983 | MS.gene066964:intron | 40.0% |
| ! | TATATGGTTGGTTCCACACT+TGG | + | chr6.4:47831364-47831383 | None:intergenic | 40.0% |
| !! | ACAACTACTTGGTGTGTGTT+TGG | - | chr6.4:47831113-47831132 | MS.gene066964:intron | 40.0% |
| !! | GTTTTATTAGAAATGCGGGG+TGG | + | chr6.4:47832051-47832070 | None:intergenic | 40.0% |
| !! | TGTGTTAGTGTTGATCAGTG+TGG | - | chr6.4:47829287-47829306 | MS.gene066964:intron | 40.0% |
| !! | TTTTGGAGAAGCGAAAGGAA+AGG | - | chr6.4:47833199-47833218 | MS.gene066964:intron | 40.0% |
| !!! | ACCTTGGTCTTTTGGTTTGT+TGG | + | chr6.4:47827593-47827612 | None:intergenic | 40.0% |
| AAAACGTGCTCTTGGTTGTC+TGG | - | chr6.4:47829423-47829442 | MS.gene066964:CDS | 45.0% | |
| AAATCACCTGAATGCAGCAC+TGG | - | chr6.4:47833576-47833595 | MS.gene066964:intron | 45.0% | |
| AGGTAATAACTGGCCAGGTA+CGG | + | chr6.4:47830177-47830196 | None:intergenic | 45.0% | |
| AGGTCAGTAGAGCCAACTAT+GGG | + | chr6.4:47831958-47831977 | None:intergenic | 45.0% | |
| ATCATTCTTGGGTGTGACAC+AGG | - | chr6.4:47830847-47830866 | MS.gene066964:intron | 45.0% | |
| ATGACAAGCTGGTTGCAAAG+AGG | - | chr6.4:47829748-47829767 | MS.gene066964:intron | 45.0% | |
| ATGGATCCAGTAGCTTCATC+TGG | - | chr6.4:47830779-47830798 | MS.gene066964:intron | 45.0% | |
| ATTGGGAGAGAACTTGGCAA+AGG | + | chr6.4:47832711-47832730 | None:intergenic | 45.0% | |
| CATGAGAGGTCATTGGAAGA+GGG | + | chr6.4:47832578-47832597 | None:intergenic | 45.0% | |
| CATGCAAGTACTCAACCAAG+GGG | - | chr6.4:47832594-47832613 | MS.gene066964:intron | 45.0% | |
| CCATCAAAAGGTCCCATAGT+TGG | - | chr6.4:47831943-47831962 | MS.gene066964:intron | 45.0% | |
| CCCTAAACTTAATAGCGCAG+TGG | - | chr6.4:47832319-47832338 | MS.gene066964:intron | 45.0% | |
| CCTACCAATGTGATTCAACC+AGG | - | chr6.4:47832870-47832889 | MS.gene066964:intron | 45.0% | |
| CCTGGTTGAATCACATTGGT+AGG | + | chr6.4:47832873-47832892 | None:intergenic | 45.0% | |
| CGACCTCTCTATTCGTTAAC+CGG | + | chr6.4:47833001-47833020 | None:intergenic | 45.0% | |
| CTAAGGTCTAACATGGGCAT+TGG | - | chr6.4:47829678-47829697 | MS.gene066964:intron | 45.0% | |
| CTCATGCAAGTACTCAACCA+AGG | - | chr6.4:47832592-47832611 | MS.gene066964:intron | 45.0% | |
| CTTAAAGGCAAATTGGTGGG+TGG | + | chr6.4:47833651-47833670 | None:intergenic | 45.0% | |
| CTTGGCAATTGAAGGTCCTA+AGG | + | chr6.4:47832658-47832677 | None:intergenic | 45.0% | |
| GAAGTCATTGGGAGAGAACT+TGG | + | chr6.4:47832717-47832736 | None:intergenic | 45.0% | |
| GCAAAGGTGAGAGATGAGAT+AGG | + | chr6.4:47832695-47832714 | None:intergenic | 45.0% | |
| GGTGAGACTTGAGTTTGCAA+TGG | - | chr6.4:47831002-47831021 | MS.gene066964:intron | 45.0% | |
| GTACTTGCATGAGAGGTCAT+TGG | + | chr6.4:47832585-47832604 | None:intergenic | 45.0% | |
| TAGGTCAGTAGAGCCAACTA+TGG | + | chr6.4:47831959-47831978 | None:intergenic | 45.0% | |
| TAGGTCATTGTGAGAGGACT+TGG | + | chr6.4:47832676-47832695 | None:intergenic | 45.0% | |
| TGAGAGGACTTGGCAATTGA+AGG | + | chr6.4:47832666-47832685 | None:intergenic | 45.0% | |
| TGATGACATCTCTCCTGAGA+AGG | - | chr6.4:47832285-47832304 | MS.gene066964:intron | 45.0% | |
| TGGTTGAGTACTTGCATGAG+AGG | + | chr6.4:47832592-47832611 | None:intergenic | 45.0% | |
| TGTTACAAGCCACTCTTTGG+TGG | + | chr6.4:47830069-47830088 | None:intergenic | 45.0% | |
| TTAGGAGTTCAGGAATGCAG+TGG | - | chr6.4:47830672-47830691 | MS.gene066964:intron | 45.0% | |
| ! | AACAGATAAAGGTGTGGCAG+AGG | + | chr6.4:47831920-47831939 | None:intergenic | 45.0% |
| ! | CCAACTATGGGACCTTTTGA+TGG | + | chr6.4:47831946-47831965 | None:intergenic | 45.0% |
| ! | TTGCTACTTGAACCTCCCTT+GGG | + | chr6.4:47832756-47832775 | None:intergenic | 45.0% |
| !! | TAGTTGGCTCTACTGACCTA+AGG | - | chr6.4:47831959-47831978 | MS.gene066964:intron | 45.0% |
| !! | TCGGTTTTTGGAGAAGCGAA+AGG | - | chr6.4:47833194-47833213 | MS.gene066964:intron | 45.0% |
| !! | TGGTTAGTAGGGGCATTTGA+AGG | + | chr6.4:47832810-47832829 | None:intergenic | 45.0% |
| !! | TATATAAATATTAAATGAAA+TGG | + | chr6.4:47829240-47829259 | None:intergenic | 5.0% |
| !!! | CTTATATAATTTTTTAATTT+CGG | - | chr6.4:47833387-47833406 | MS.gene066964:intron | 5.0% |
| !!! | GTTTTTTTTTATATATATTT+GGG | - | chr6.4:47827783-47827802 | MS.gene066964:intron | 5.0% |
| !!! | TGTTTTTTTTTATATATATT+TGG | - | chr6.4:47827782-47827801 | MS.gene066964:intron | 5.0% |
| !!! | TTTTATTTATTTATTTTGAT+GGG | - | chr6.4:47830381-47830400 | MS.gene066964:intron | 5.0% |
| !!! | TTTTTATTTATTTATTTTGA+TGG | - | chr6.4:47830380-47830399 | MS.gene066964:intron | 5.0% |
| ATTGGAAGAGGGCTTGGCAA+TGG | + | chr6.4:47832567-47832586 | None:intergenic | 50.0% | |
| CTGAGCAGGTGTAGTACCAT+TGG | + | chr6.4:47832230-47832249 | None:intergenic | 50.0% | |
| CTTGGCAATGGTGAGGGATA+GGG | + | chr6.4:47832555-47832574 | None:intergenic | 50.0% | |
| GCAAGTTCTTATCCCAAGGG+AGG | - | chr6.4:47832741-47832760 | MS.gene066964:intron | 50.0% | |
| GCATGAGAGGTCATTGGAAG+AGG | + | chr6.4:47832579-47832598 | None:intergenic | 50.0% | |
| TCTGATCCAGTGCTGCATTC+AGG | + | chr6.4:47833585-47833604 | None:intergenic | 50.0% | |
| ! | ATGGTTGGTTCCACACTTGG+AGG | + | chr6.4:47831361-47831380 | None:intergenic | 50.0% |
| ! | GTTGCTACTTGAACCTCCCT+TGG | + | chr6.4:47832757-47832776 | None:intergenic | 50.0% |
| ! | TTGCTACTTGAACCTCCCCT+TGG | + | chr6.4:47832612-47832631 | None:intergenic | 50.0% |
| !!! | AGCATCGCTGACTCGGTTTT+TGG | - | chr6.4:47833182-47833201 | MS.gene066964:intron | 50.0% |
| AAGAGGGCTTGGCAATGGTG+AGG | + | chr6.4:47832562-47832581 | None:intergenic | 55.0% | |
| ACGTGCTCTTGGTTGTCTGG+TGG | - | chr6.4:47829426-47829445 | MS.gene066964:CDS | 55.0% | |
| AGAGGGCTTGGCAATGGTGA+GGG | + | chr6.4:47832561-47832580 | None:intergenic | 55.0% | |
| ATTGACGAGTCTCCGCGTCT+AGG | + | chr6.4:47833327-47833346 | None:intergenic | 55.0% | |
| GAGGTCATTGGAAGAGGGCT+TGG | + | chr6.4:47832573-47832592 | None:intergenic | 55.0% | |
| GCAAGTACTCAACCAAGGGG+AGG | - | chr6.4:47832597-47832616 | MS.gene066964:intron | 55.0% | |
| GCAATGGTGAGGGATAGGGT+TGG | + | chr6.4:47832551-47832570 | None:intergenic | 55.0% | |
| GCTTGGCAATGGTGAGGGAT+AGG | + | chr6.4:47832556-47832575 | None:intergenic | 55.0% | |
| ! | AGCGATGCTTTTCGCGCTTG+AGG | + | chr6.4:47833171-47833190 | None:intergenic | 55.0% |
| !! | CGCGAAAAGCATCGCTGACT+CGG | - | chr6.4:47833175-47833194 | MS.gene066964:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 47827574 | 47833698 | 47827574 | ID=MS.gene066964 |
| chr6.4 | mRNA | 47827574 | 47833698 | 47827574 | ID=MS.gene066964.t1;Parent=MS.gene066964 |
| chr6.4 | exon | 47833662 | 47833698 | 47833662 | ID=MS.gene066964.t1.exon1;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47833662 | 47833698 | 47833662 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47830404 | 47830600 | 47830404 | ID=MS.gene066964.t1.exon2;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47830404 | 47830600 | 47830404 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47829292 | 47829545 | 47829292 | ID=MS.gene066964.t1.exon3;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47829292 | 47829545 | 47829292 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47828966 | 47829065 | 47828966 | ID=MS.gene066964.t1.exon4;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47828966 | 47829065 | 47828966 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47828381 | 47828813 | 47828381 | ID=MS.gene066964.t1.exon5;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47828381 | 47828813 | 47828381 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47828052 | 47828112 | 47828052 | ID=MS.gene066964.t1.exon6;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47828052 | 47828112 | 47828052 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| chr6.4 | exon | 47827574 | 47827730 | 47827574 | ID=MS.gene066964.t1.exon7;Parent=MS.gene066964.t1 |
| chr6.4 | CDS | 47827574 | 47827730 | 47827574 | ID=cds.MS.gene066964.t1;Parent=MS.gene066964.t1 |
| Gene Sequence |
| Protein sequence |
