Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82105.t1 | XP_003619851.3 | 91.8 | 413 | 21 | 3 | 12 | 422 | 28 | 429 | 7.30E-166 | 593.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82105.t1 | Q9LVI4 | 35.3 | 402 | 175 | 15 | 12 | 404 | 27 | 352 | 8.8e-35 | 149.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82105.t1 | A0A396HFY8 | 91.8 | 413 | 21 | 3 | 12 | 422 | 28 | 429 | 5.3e-166 | 593.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene82105.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066964 | MS.gene82105 | PPI |
| MS.gene82105 | MS.gene042866 | PPI |
| MS.gene79795 | MS.gene82105 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82105.t1 | MTR_6g069870 | 91.379 | 406 | 22 | 3 | 19 | 422 | 1 | 395 | 0.0 | 736 |
| MS.gene82105.t1 | MTR_6g069870 | 90.704 | 355 | 20 | 3 | 19 | 371 | 1 | 344 | 0.0 | 637 |
| MS.gene82105.t1 | MTR_6g069870 | 90.120 | 334 | 20 | 3 | 19 | 350 | 1 | 323 | 0.0 | 592 |
| MS.gene82105.t1 | MTR_1g031930 | 30.155 | 388 | 172 | 12 | 17 | 387 | 31 | 336 | 8.63e-30 | 119 |
| MS.gene82105.t1 | MTR_1g031930 | 35.537 | 242 | 85 | 8 | 158 | 384 | 87 | 272 | 3.12e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82105.t1 | AT3G17860 | 37.662 | 385 | 149 | 16 | 12 | 384 | 27 | 332 | 4.39e-47 | 165 |
| MS.gene82105.t1 | AT3G17860 | 37.995 | 379 | 144 | 16 | 18 | 384 | 20 | 319 | 1.14e-46 | 164 |
| MS.gene82105.t1 | AT3G17860 | 37.831 | 378 | 144 | 16 | 19 | 384 | 1 | 299 | 2.73e-46 | 162 |
| MS.gene82105.t1 | AT3G17860 | 37.831 | 378 | 144 | 16 | 19 | 384 | 1 | 299 | 2.73e-46 | 162 |
| MS.gene82105.t1 | AT1G48500 | 32.658 | 395 | 126 | 16 | 12 | 389 | 24 | 295 | 8.80e-32 | 123 |
| MS.gene82105.t1 | AT1G48500 | 32.337 | 368 | 111 | 14 | 19 | 371 | 2 | 246 | 1.16e-27 | 110 |
| MS.gene82105.t1 | AT1G48500 | 32.447 | 376 | 115 | 15 | 12 | 371 | 24 | 276 | 1.78e-27 | 110 |
| MS.gene82105.t1 | AT1G70700 | 30.723 | 166 | 104 | 5 | 71 | 230 | 2 | 162 | 7.05e-12 | 65.5 |
| MS.gene82105.t1 | AT1G70700 | 30.723 | 166 | 104 | 5 | 71 | 230 | 2 | 162 | 9.24e-12 | 65.5 |
| MS.gene82105.t1 | AT1G70700 | 36.585 | 123 | 73 | 3 | 111 | 230 | 42 | 162 | 2.12e-11 | 64.7 |
Find 89 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATACATGTTCTTCTTAA+AGG | 0.090775 | 6.1:+63658308 | None:intergenic |
| TTGTAGGAAAATTTGGTAAT+AGG | 0.229586 | 6.1:-63660298 | MS.gene82105:intron |
| TGTTCTTCTTAAAGGCAAAT+TGG | 0.268291 | 6.1:+63658316 | None:intergenic |
| GTTATAAACTCACAAACTTT+TGG | 0.313000 | 6.1:-63660100 | MS.gene82105:CDS |
| TTTGATGCAGTTAGGAGTTC+AGG | 0.316880 | 6.1:-63662714 | MS.gene82105:CDS |
| AAATGCTTCTACTAACCATT+TGG | 0.323976 | 6.1:-63659112 | MS.gene82105:CDS |
| GTCTAATCAGAAATCATTCT+TGG | 0.326422 | 6.1:-63662541 | MS.gene82105:CDS |
| AACACATTTGATTGTTAGAT+TGG | 0.328048 | 6.1:+63660173 | None:intergenic |
| TGAGAAATCAATGGAGAAAC+TGG | 0.337756 | 6.1:+63658361 | None:intergenic |
| AATCTCCATCCCTTCCAAAA+AGG | 0.360690 | 6.1:-63659415 | MS.gene82105:CDS |
| TTTGATGGAAGAACAGATAA+AGG | 0.367261 | 6.1:+63660058 | None:intergenic |
| CCTGGTTGAATCACATTTGT+AGG | 0.375793 | 6.1:+63659054 | None:intergenic |
| GTCACAATAATAAGATCTTT+AGG | 0.396082 | 6.1:-63659141 | MS.gene82105:CDS |
| GCTCAGTTGACCATATTCTA+TGG | 0.396208 | 6.1:-63659689 | MS.gene82105:CDS |
| TACTGTACCACCATAGAATA+TGG | 0.403758 | 6.1:+63659679 | None:intergenic |
| AGGTGTAGTACCATTGGATT+TGG | 0.407015 | 6.1:+63659712 | None:intergenic |
| TCTGATCCAGTGCTGCATTC+AGG | 0.408286 | 6.1:+63658389 | None:intergenic |
| GTCACGATAATAAGAACTTT+AGG | 0.415493 | 6.1:-63659285 | MS.gene82105:CDS |
| TAAGTCAGTAGAGCCAACTA+TGG | 0.416073 | 6.1:+63660030 | None:intergenic |
| GGTTGGCAATGGTGAGGGAT+AGG | 0.416959 | 6.1:+63659371 | None:intergenic |
| GTTGCTACTTGAACCTCCCT+TGG | 0.419319 | 6.1:+63659170 | None:intergenic |
| CAATCTAATCATGCTACTAC+TGG | 0.427777 | 6.1:-63660142 | MS.gene82105:CDS |
| TAGTTGGCTCTACTGACTTA+AGG | 0.429024 | 6.1:-63660027 | MS.gene82105:intron |
| TTATCTGTTCTTCCATCAAA+AGG | 0.431556 | 6.1:-63660055 | MS.gene82105:CDS |
| CCTATTGTTGCTACTTCTGT+AGG | 0.433479 | 6.1:-63659084 | MS.gene82105:CDS |
| TGAGAGGACTTGGCAATTGA+AGG | 0.441352 | 6.1:+63659261 | None:intergenic |
| TAGGTCATTGTGAGAGGACT+TGG | 0.441836 | 6.1:+63659251 | None:intergenic |
| TTCTTAAATTTGATGCAGTT+AGG | 0.445314 | 6.1:-63662722 | MS.gene82105:CDS |
| CCTACAGAAGTAGCAACAAT+AGG | 0.446555 | 6.1:+63659084 | None:intergenic |
| GAAGTCATTGGGAGAGAACT+TGG | 0.446941 | 6.1:+63659210 | None:intergenic |
| GAACTTGCATGAGAAGTCAT+TGG | 0.447319 | 6.1:+63659198 | None:intergenic |
| GCCTTTAAGAAGAACATGTA+TGG | 0.452229 | 6.1:-63658309 | MS.gene82105:CDS |
| CGCGAAAAGCATCGCTGACT+CGG | 0.452418 | 6.1:-63658790 | MS.gene82105:CDS |
| TAGAATATGGTCAACTGAGC+AGG | 0.462120 | 6.1:+63659692 | None:intergenic |
| TTGCTACTTGAACCTCCCTT+GGG | 0.466052 | 6.1:+63659171 | None:intergenic |
| GTACTTGCATGAGAGGTCAT+TGG | 0.470357 | 6.1:+63659342 | None:intergenic |
| GTTGGCAATGGTGAGGGATA+GGG | 0.472895 | 6.1:+63659372 | None:intergenic |
| ATATATCCAGACGAAGCTAC+TGG | 0.483233 | 6.1:+63662591 | None:intergenic |
| ATCATGTTACTAGCTGGAAA+TGG | 0.485043 | 6.1:-63659456 | MS.gene82105:CDS |
| AACTTGCATGAGAAGTCATT+GGG | 0.486290 | 6.1:+63659199 | None:intergenic |
| TTGCTACTTGAACCTCCCCT+TGG | 0.487948 | 6.1:+63659315 | None:intergenic |
| AGAATAATACTCATGAAGAT+AGG | 0.490063 | 6.1:-63662635 | MS.gene82105:CDS |
| ATGGATCCAGTAGCTTCGTC+TGG | 0.490955 | 6.1:-63662597 | MS.gene82105:CDS |
| TTCTTGAATGACATGAATTG+AGG | 0.493289 | 6.1:+63662654 | None:intergenic |
| CTGAGCAGGTGTAGTACCAT+TGG | 0.495191 | 6.1:+63659706 | None:intergenic |
| GCATGAGAGGTCATTGGAAG+AGG | 0.498473 | 6.1:+63659348 | None:intergenic |
| CCATCAAAAGGTCCCATAGT+TGG | 0.499185 | 6.1:-63660043 | MS.gene82105:CDS |
| ATCATTCTTGGGTGTGACAC+AGG | 0.504017 | 6.1:-63662529 | MS.gene82105:intron |
| AACTTGGCAAAGGTGAGAGA+TGG | 0.504464 | 6.1:+63659226 | None:intergenic |
| TCTAATCAGAAATCATTCTT+GGG | 0.505529 | 6.1:-63662540 | MS.gene82105:CDS |
| AAGGCTATCATGTTACTAGC+TGG | 0.511104 | 6.1:-63659462 | MS.gene82105:CDS |
| CAACAATAGGAGATTCCAAA+TGG | 0.511822 | 6.1:+63659097 | None:intergenic |
| AGAGGGGTTGGCAATGGTGA+GGG | 0.520042 | 6.1:+63659366 | None:intergenic |
| TCATGCAAGTTCTTATCCCA+AGG | 0.526316 | 6.1:-63659187 | MS.gene82105:CDS |
| GAGGTCATTGGAAGAGGGGT+TGG | 0.526527 | 6.1:+63659354 | None:intergenic |
| CTTCTTAAAGGCAAATTGGT+GGG | 0.529876 | 6.1:+63658320 | None:intergenic |
| CATGAGAGGTCATTGGAAGA+GGG | 0.537175 | 6.1:+63659349 | None:intergenic |
| TAGGTCAAGAAACAGTGTAA+TGG | 0.537846 | 6.1:-63662616 | MS.gene82105:CDS |
| AAATCACCTGAATGCAGCAC+TGG | 0.539481 | 6.1:-63658395 | MS.gene82105:CDS |
| ACTTGGCAAAGGTGAGAGAT+GGG | 0.542203 | 6.1:+63659227 | None:intergenic |
| ACTTGAACTTGAGAAATCAA+TGG | 0.545383 | 6.1:+63658352 | None:intergenic |
| AACAGATAAAGGTGTAGCAG+AGG | 0.545628 | 6.1:+63660069 | None:intergenic |
| ATTGGAAGAGGGGTTGGCAA+TGG | 0.546716 | 6.1:+63659360 | None:intergenic |
| AAGAGGGGTTGGCAATGGTG+AGG | 0.549255 | 6.1:+63659365 | None:intergenic |
| TGGTTGAGTACTTGCATGAG+AGG | 0.558968 | 6.1:+63659335 | None:intergenic |
| TCTTCTTAAAGGCAAATTGG+TGG | 0.560082 | 6.1:+63658319 | None:intergenic |
| TGGTTAGTAGAAGCATTTGA+AGG | 0.561148 | 6.1:+63659117 | None:intergenic |
| TGAATGACATGAATTGAGGA+AGG | 0.578633 | 6.1:+63662658 | None:intergenic |
| CTTAAAGGCAAATTGGTGGG+TGG | 0.595542 | 6.1:+63658323 | None:intergenic |
| CCTACAAATGTGATTCAACC+AGG | 0.596560 | 6.1:-63659054 | MS.gene82105:intron |
| TCATGCAAGTACTCAACCAA+GGG | 0.597542 | 6.1:-63659331 | MS.gene82105:CDS |
| AAGTCAGTAGAGCCAACTAT+GGG | 0.597778 | 6.1:+63660031 | None:intergenic |
| TGTGTATGATGACATATCTC+CGG | 0.600023 | 6.1:-63659654 | MS.gene82105:CDS |
| AAGCAAGTAGCAAACAAGCA+TGG | 0.604140 | 6.1:-63660274 | MS.gene82105:CDS |
| CATGCAAGTTCTTATCCCAA+GGG | 0.608931 | 6.1:-63659186 | MS.gene82105:CDS |
| TGATGACATATCTCCGGAGA+AGG | 0.610202 | 6.1:-63659648 | MS.gene82105:intron |
| CTCATGCAAGTACTCAACCA+AGG | 0.611643 | 6.1:-63659332 | MS.gene82105:CDS |
| AGGAATTGTTCCAAATCCAA+TGG | 0.614409 | 6.1:-63659722 | MS.gene82105:CDS |
| ATGGGATAGGTCATTGTGAG+AGG | 0.619583 | 6.1:+63659245 | None:intergenic |
| GCAAAGGTGAGAGATGGGAT+AGG | 0.630123 | 6.1:+63659232 | None:intergenic |
| ATGAGAGGTCATTGGAAGAG+GGG | 0.630744 | 6.1:+63659350 | None:intergenic |
| GCAAGTTCTTATCCCAAGGG+AGG | 0.641995 | 6.1:-63659183 | MS.gene82105:CDS |
| GCAATGGTGAGGGATAGGGT+TGG | 0.646719 | 6.1:+63659376 | None:intergenic |
| ATTGGGAGAGAACTTGGCAA+AGG | 0.651165 | 6.1:+63659216 | None:intergenic |
| TGCTACTACTGGAATCAACA+TGG | 0.665801 | 6.1:-63660131 | MS.gene82105:CDS |
| CAGTTGACCATATTCTATGG+TGG | 0.670630 | 6.1:-63659686 | MS.gene82105:CDS |
| TTAGGAGTTCAGGAATGCAG+TGG | 0.686957 | 6.1:-63662704 | MS.gene82105:CDS |
| GCAAGTACTCAACCAAGGGG+AGG | 0.687330 | 6.1:-63659327 | MS.gene82105:CDS |
| CATGCAAGTACTCAACCAAG+GGG | 0.756359 | 6.1:-63659330 | MS.gene82105:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr6.1:63659623-63659642 | MS.gene82105:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr6.1:63659642-63659623 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr6.1:63659642-63659623 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr6.1:63659624-63659643 | MS.gene82105:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr6.1:63659643-63659624 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr6.1:63659643-63659624 | None:intergenic | 0.0% |
| !! | AGAAGAAAAAAAAATTATTA+AGG | + | chr6.1:63660739-63660758 | None:intergenic | 10.0% |
| !! | ATATATATATGTATGTATAT+AGG | - | chr6.1:63659641-63659660 | MS.gene82105:intron | 10.0% |
| !! | TTTAGAAAAATACTATATTA+TGG | - | chr6.1:63662064-63662083 | MS.gene82105:intron | 10.0% |
| !!! | ATTTTTATAATATGATATTG+TGG | - | chr6.1:63661263-63661282 | MS.gene82105:intron | 10.0% |
| !!! | TTAATATTTTTTTCAAATGT+TGG | + | chr6.1:63661076-63661095 | None:intergenic | 10.0% |
| !!! | TTATTTTTTAATGTTGATTT+AGG | - | chr6.1:63658304-63658323 | MS.gene82105:CDS | 10.0% |
| !! | AAAGTAAATCTAAAAGAATA+CGG | + | chr6.1:63659054-63659073 | None:intergenic | 15.0% |
| !!! | AACTTTGCTAATTATTATTT+TGG | + | chr6.1:63662226-63662245 | None:intergenic | 15.0% |
| !!! | AATTATTTTGATATACACAA+AGG | + | chr6.1:63658611-63658630 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTGTACTTACTTA+GGG | - | chr6.1:63662616-63662635 | MS.gene82105:CDS | 15.0% |
| !!! | TATAATGAAATTATCCTTTT+TGG | + | chr6.1:63661668-63661687 | None:intergenic | 15.0% |
| !!! | TTGTTTTCTTTGTTTTTTAT+AGG | - | chr6.1:63661318-63661337 | MS.gene82105:intron | 15.0% |
| !! | AAAAACATATTAAGTGATGA+AGG | + | chr6.1:63662344-63662363 | None:intergenic | 20.0% |
| !! | AGATTAAAACCCAAATTAAA+AGG | + | chr6.1:63659522-63659541 | None:intergenic | 20.0% |
| !! | ATACCAACTAATTTATATGA+AGG | + | chr6.1:63659185-63659204 | None:intergenic | 20.0% |
| !! | CCACAAATTATAAGATATAT+AGG | + | chr6.1:63660652-63660671 | None:intergenic | 20.0% |
| !! | CCTATATATCTTATAATTTG+TGG | - | chr6.1:63660649-63660668 | MS.gene82105:intron | 20.0% |
| !! | TAAGAAAGACTACTATATAT+GGG | + | chr6.1:63659275-63659294 | None:intergenic | 20.0% |
| !!! | AACCATTAATTTTAATCTGA+TGG | - | chr6.1:63659543-63659562 | MS.gene82105:intron | 20.0% |
| !!! | CATTTTTTTTGTACTTACTT+AGG | - | chr6.1:63662615-63662634 | MS.gene82105:CDS | 20.0% |
| !!! | CTAATAAAACATGTGTTTTT+CGG | - | chr6.1:63661152-63661171 | MS.gene82105:intron | 20.0% |
| !!! | TATATCTTATAATTTGTGGA+AGG | - | chr6.1:63660653-63660672 | MS.gene82105:intron | 20.0% |
| !!! | TCTATATTGAGAAACAATTT+TGG | - | chr6.1:63658732-63658751 | MS.gene82105:intron | 20.0% |
| !!! | TGATATTTTGTAGGAAAATT+TGG | - | chr6.1:63660761-63660780 | MS.gene82105:intron | 20.0% |
| !!! | TTCTTCTTTTGATATTTTGT+AGG | - | chr6.1:63660752-63660771 | MS.gene82105:intron | 20.0% |
| ! | AAACACTTTCAATTTGTGTT+AGG | + | chr6.1:63660627-63660646 | None:intergenic | 25.0% |
| ! | AACACATTTGATTGTTAGAT+TGG | + | chr6.1:63660896-63660915 | None:intergenic | 25.0% |
| ! | ACACCTTCATATAAATTAGT+TGG | - | chr6.1:63659179-63659198 | MS.gene82105:CDS | 25.0% |
| ! | AGAATAATACTCATGAAGAT+AGG | - | chr6.1:63658431-63658450 | MS.gene82105:CDS | 25.0% |
| ! | AGCCATCAGATTAAAATTAA+TGG | + | chr6.1:63659548-63659567 | None:intergenic | 25.0% |
| ! | AGTCTAAAAATCAATTGTAG+AGG | - | chr6.1:63658910-63658929 | MS.gene82105:intron | 25.0% |
| ! | ATAAAAGACACCTTCATTAA+AGG | - | chr6.1:63659809-63659828 | MS.gene82105:intron | 25.0% |
| ! | ATATAGTAGTCTTTCTTACA+TGG | - | chr6.1:63659277-63659296 | MS.gene82105:CDS | 25.0% |
| ! | CATCTTTATATGAGAATGAT+AGG | + | chr6.1:63659581-63659600 | None:intergenic | 25.0% |
| ! | CTATATTATGTTAGCCAATT+TGG | + | chr6.1:63662541-63662560 | None:intergenic | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | - | chr6.1:63659979-63659998 | MS.gene82105:intron | 25.0% |
| ! | GTAAGAAAGACTACTATATA+TGG | + | chr6.1:63659276-63659295 | None:intergenic | 25.0% |
| ! | GTCACAATAATAAGATCTTT+AGG | - | chr6.1:63661925-63661944 | MS.gene82105:intron | 25.0% |
| ! | TAAATCTAAAAGAATACGGT+TGG | + | chr6.1:63659050-63659069 | None:intergenic | 25.0% |
| ! | TCTAATCAGAAATCATTCTT+GGG | - | chr6.1:63658526-63658545 | MS.gene82105:intron | 25.0% |
| ! | TGAATGAATTGATTGTAAAG+TGG | + | chr6.1:63660580-63660599 | None:intergenic | 25.0% |
| ! | TGCCAAACATCATAAAAATT+TGG | + | chr6.1:63658712-63658731 | None:intergenic | 25.0% |
| ! | TGGTTTCTGAATCAATTATT+AGG | - | chr6.1:63658752-63658771 | MS.gene82105:intron | 25.0% |
| ! | TTCTTAAATTTGATGCAGTT+AGG | - | chr6.1:63658344-63658363 | MS.gene82105:CDS | 25.0% |
| ! | TTTCTATACCTAATATCCAA+AGG | + | chr6.1:63662370-63662389 | None:intergenic | 25.0% |
| !! | ATGAAATTATCCTTTTTGGA+AGG | + | chr6.1:63661664-63661683 | None:intergenic | 25.0% |
| !! | GACCAAATTTTTATGATGTT+TGG | - | chr6.1:63658707-63658726 | MS.gene82105:intron | 25.0% |
| !! | GTTATAAACTCACAAACTTT+TGG | - | chr6.1:63660966-63660985 | MS.gene82105:intron | 25.0% |
| !! | TTATATAAGTTCTTTTGCGT+CGG | + | chr6.1:63662472-63662491 | None:intergenic | 25.0% |
| !! | TTGTAGGAAAATTTGGTAAT+AGG | - | chr6.1:63660768-63660787 | MS.gene82105:intron | 25.0% |
| !!! | ACATGTTTTATTAGAAATGC+AGG | + | chr6.1:63661146-63661165 | None:intergenic | 25.0% |
| !!! | ACGATTGATTTTTACCTATT+TGG | + | chr6.1:63658988-63659007 | None:intergenic | 25.0% |
| !!! | AGTTAAATGGCCTTTTAATT+TGG | - | chr6.1:63659509-63659528 | MS.gene82105:intron | 25.0% |
| !!! | ATGGTCGAAAAAATTGATTT+TGG | - | chr6.1:63661218-63661237 | MS.gene82105:intron | 25.0% |
| !!! | CATGTTTTATTAGAAATGCA+GGG | + | chr6.1:63661145-63661164 | None:intergenic | 25.0% |
| !!! | GATTTTTATTTTCCATGACT+AGG | - | chr6.1:63661579-63661598 | MS.gene82105:intron | 25.0% |
| !!! | GATTTTTTGCTCATATAGTA+TGG | + | chr6.1:63662656-63662675 | None:intergenic | 25.0% |
| !!! | GCAAAGTTTTAACTAAAAAG+TGG | + | chr6.1:63659153-63659172 | None:intergenic | 25.0% |
| !!! | GTTAAATGGCCTTTTAATTT+GGG | - | chr6.1:63659510-63659529 | MS.gene82105:intron | 25.0% |
| !!! | TCTTTGTTTTTTATAGGAGT+AGG | - | chr6.1:63661324-63661343 | MS.gene82105:intron | 25.0% |
| !!! | TGAAATTATCCTTTTTGGAA+GGG | + | chr6.1:63661663-63661682 | None:intergenic | 25.0% |
| !!! | TGGTCGAAAAAATTGATTTT+GGG | - | chr6.1:63661219-63661238 | MS.gene82105:intron | 25.0% |
| !!! | TTAATATGTTTTTGAGCCTT+TGG | - | chr6.1:63662351-63662370 | MS.gene82105:intron | 25.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr6.1:63659712-63659731 | None:intergenic | 30.0% | |
| AAATGCTAAATAGACCAGAT+AGG | + | chr6.1:63662047-63662066 | None:intergenic | 30.0% | |
| AAATGCTTCTACTAACCATT+TGG | - | chr6.1:63661954-63661973 | MS.gene82105:intron | 30.0% | |
| AATTACTAAAATACCCCCAA+CGG | + | chr6.1:63660406-63660425 | None:intergenic | 30.0% | |
| ACCTTCTAACAATAACAAGT+GGG | - | chr6.1:63660037-63660056 | MS.gene82105:CDS | 30.0% | |
| ACGCTATCAAGATAAGTTTA+CGG | + | chr6.1:63661456-63661475 | None:intergenic | 30.0% | |
| ACTTGAACTTGAGAAATCAA+TGG | + | chr6.1:63662717-63662736 | None:intergenic | 30.0% | |
| ATAGAAGACACCTTTAATGA+AGG | + | chr6.1:63659822-63659841 | None:intergenic | 30.0% | |
| ATTAAACTCGATGACCAAAT+TGG | - | chr6.1:63662524-63662543 | MS.gene82105:intron | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr6.1:63659234-63659253 | MS.gene82105:CDS | 30.0% | |
| GCAACTAGATAACTAAAAAG+TGG | - | chr6.1:63660128-63660147 | MS.gene82105:CDS | 30.0% | |
| GTAAAAAAAGTTACCTTCTC+CGG | + | chr6.1:63661434-63661453 | None:intergenic | 30.0% | |
| GTCACGATAATAAGAACTTT+AGG | - | chr6.1:63661781-63661800 | MS.gene82105:intron | 30.0% | |
| GTCTAATCAGAAATCATTCT+TGG | - | chr6.1:63658525-63658544 | MS.gene82105:intron | 30.0% | |
| TATGATATTGTGGAGCAATT+TGG | - | chr6.1:63661273-63661292 | MS.gene82105:intron | 30.0% | |
| TCAATTTGTGTTAGGTTATG+CGG | + | chr6.1:63660619-63660638 | None:intergenic | 30.0% | |
| TCCATACATGTTCTTCTTAA+AGG | + | chr6.1:63662761-63662780 | None:intergenic | 30.0% | |
| TCGATAGATTCATGTAAAAG+TGG | - | chr6.1:63658870-63658889 | MS.gene82105:intron | 30.0% | |
| TGAATGAATTATTGTCAGCT+CGG | + | chr6.1:63662122-63662141 | None:intergenic | 30.0% | |
| TGTTCTTCTTAAAGGCAAAT+TGG | + | chr6.1:63662753-63662772 | None:intergenic | 30.0% | |
| TTATAGCAACATACACCTTA+GGG | + | chr6.1:63660014-63660033 | None:intergenic | 30.0% | |
| TTATCTGTTCTTCCATCAAA+AGG | - | chr6.1:63661011-63661030 | MS.gene82105:intron | 30.0% | |
| TTCTTGAATGACATGAATTG+AGG | + | chr6.1:63658415-63658434 | None:intergenic | 30.0% | |
| TTTGACATTCAAAATGTCCT+AGG | - | chr6.1:63660300-63660319 | MS.gene82105:intron | 30.0% | |
| TTTGATGGAAGAACAGATAA+AGG | + | chr6.1:63661011-63661030 | None:intergenic | 30.0% | |
| ! | TCGTTCAGAGTATTATTAGA+TGG | - | chr6.1:63661199-63661218 | MS.gene82105:intron | 30.0% |
| ! | TGTGTATCAGAATTTTGCAT+AGG | + | chr6.1:63660831-63660850 | None:intergenic | 30.0% |
| ! | TTTTATCAAGTCACACCTTA+AGG | - | chr6.1:63659694-63659713 | MS.gene82105:CDS | 30.0% |
| ! | TTTTGTGATGTGATTTTCTG+AGG | - | chr6.1:63662586-63662605 | MS.gene82105:CDS | 30.0% |
| !! | AAAGACACCAACTTACTTTT+AGG | + | chr6.1:63659764-63659783 | None:intergenic | 30.0% |
| !! | GGTCGAAAAAATTGATTTTG+GGG | - | chr6.1:63661220-63661239 | MS.gene82105:intron | 30.0% |
| !! | TTTTTGAGCCTTTGGATATT+AGG | - | chr6.1:63662359-63662378 | MS.gene82105:intron | 30.0% |
| !!! | AGTTTTGTTGTGTTTCTAGT+TGG | - | chr6.1:63662242-63662261 | MS.gene82105:intron | 30.0% |
| !!! | CTTTTTTGATTACTCCAAGA+GGG | - | chr6.1:63659021-63659040 | MS.gene82105:intron | 30.0% |
| !!! | GTTTTCTAGTTATAACCCAA+CGG | - | chr6.1:63660370-63660389 | MS.gene82105:intron | 30.0% |
| !!! | TCTTTTTTGATTACTCCAAG+AGG | - | chr6.1:63659020-63659039 | MS.gene82105:intron | 30.0% |
| !!! | TTTTTTGATTACTCCAAGAG+GGG | - | chr6.1:63659022-63659041 | MS.gene82105:intron | 30.0% |
| AAATGCAGGGTGGAAAAAAT+TGG | + | chr6.1:63661132-63661151 | None:intergenic | 35.0% | |
| AACTTGCATGAGAAGTCATT+GGG | + | chr6.1:63661870-63661889 | None:intergenic | 35.0% | |
| AAGAACATTGAGTGCTTGTT+AGG | - | chr6.1:63658642-63658661 | MS.gene82105:intron | 35.0% | |
| AAGTGGTTAAATACACCCTA+AGG | - | chr6.1:63659996-63660015 | MS.gene82105:intron | 35.0% | |
| AAGTGGTTAATTACACCCTA+AGG | - | chr6.1:63660145-63660164 | MS.gene82105:CDS | 35.0% | |
| AATGACTTTGACGATGATGA+TGG | - | chr6.1:63659376-63659395 | MS.gene82105:CDS | 35.0% | |
| ACACCTTCCTAAAAGTAAGT+TGG | - | chr6.1:63659754-63659773 | MS.gene82105:intron | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | - | chr6.1:63660185-63660204 | MS.gene82105:CDS | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | + | chr6.1:63660204-63660185 | None:intergenic | 35.0% | |
| AGGAATTGTTCCAAATCCAA+TGG | - | chr6.1:63661344-63661363 | MS.gene82105:intron | 35.0% | |
| ATCATGTTACTAGCTGGAAA+TGG | - | chr6.1:63661610-63661629 | MS.gene82105:intron | 35.0% | |
| ATCCAGTAGTCTTTCTTACA+TGG | - | chr6.1:63659331-63659350 | MS.gene82105:CDS | 35.0% | |
| CAACAATAGGAGATTCCAAA+TGG | + | chr6.1:63661972-63661991 | None:intergenic | 35.0% | |
| CAATCTAATCATGCTACTAC+TGG | - | chr6.1:63660924-63660943 | MS.gene82105:intron | 35.0% | |
| CACCTTCTAACAATAACAAG+TGG | - | chr6.1:63660036-63660055 | MS.gene82105:CDS | 35.0% | |
| CTTCTTAAAGGCAAATTGGT+GGG | + | chr6.1:63662749-63662768 | None:intergenic | 35.0% | |
| CTTGCTAAAAGACATCTTCA+TGG | + | chr6.1:63659109-63659128 | None:intergenic | 35.0% | |
| GGTTATAACTAGAAAACCAG+CGG | + | chr6.1:63660367-63660386 | None:intergenic | 35.0% | |
| GTTATAGCAACATACACCTT+AGG | + | chr6.1:63660015-63660034 | None:intergenic | 35.0% | |
| TAAAAGACCAAAAAACCCAG+CGG | - | chr6.1:63660331-63660350 | MS.gene82105:intron | 35.0% | |
| TACTGTACCACCATAGAATA+TGG | + | chr6.1:63661390-63661409 | None:intergenic | 35.0% | |
| TAGGTCAAGAAACAGTGTAA+TGG | - | chr6.1:63658450-63658469 | MS.gene82105:intron | 35.0% | |
| TCTTCTTAAAGGCAAATTGG+TGG | + | chr6.1:63662750-63662769 | None:intergenic | 35.0% | |
| TGAATGACATGAATTGAGGA+AGG | + | chr6.1:63658411-63658430 | None:intergenic | 35.0% | |
| TGAGAAATCAATGGAGAAAC+TGG | + | chr6.1:63662708-63662727 | None:intergenic | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr6.1:63659682-63659701 | None:intergenic | 35.0% | |
| TGTGTATGATGACATATCTC+CGG | - | chr6.1:63661412-63661431 | MS.gene82105:intron | 35.0% | |
| TGTGTTCTAGCAAATCCTAT+AGG | - | chr6.1:63660060-63660079 | MS.gene82105:CDS | 35.0% | |
| TTAGTGTGTGTTTGTGTGTT+TGG | - | chr6.1:63658787-63658806 | MS.gene82105:CDS | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr6.1:63659683-63659702 | None:intergenic | 35.0% | |
| TTTAGCAAAGCTACACCTTA+GGG | + | chr6.1:63660163-63660182 | None:intergenic | 35.0% | |
| ! | CTAGAAGACACCTTTTATGA+AGG | + | chr6.1:63659247-63659266 | None:intergenic | 35.0% |
| ! | GCCTTTAAGAAGAACATGTA+TGG | - | chr6.1:63662757-63662776 | MS.gene82105:intron | 35.0% |
| ! | TATTTTCCATGACTAGGCTA+AGG | - | chr6.1:63661585-63661604 | MS.gene82105:intron | 35.0% |
| ! | TTTTAGCAAAGCTACACCTT+AGG | + | chr6.1:63660164-63660183 | None:intergenic | 35.0% |
| !! | AACTTATCTTGATAGCGTAG+TGG | - | chr6.1:63661458-63661477 | MS.gene82105:intron | 35.0% |
| !! | ACACCAACTTACTTTTAGGA+AGG | + | chr6.1:63659760-63659779 | None:intergenic | 35.0% |
| !! | ACCCACTTGTTATTGTTAGA+AGG | + | chr6.1:63660041-63660060 | None:intergenic | 35.0% |
| !! | ATTATCCTTTTTGGAAGGGA+TGG | + | chr6.1:63661659-63661678 | None:intergenic | 35.0% |
| !! | GTTTTATTAGAAATGCAGGG+TGG | + | chr6.1:63661142-63661161 | None:intergenic | 35.0% |
| !! | TGAGTGCTTGTTAGGTTTTA+AGG | - | chr6.1:63658650-63658669 | MS.gene82105:intron | 35.0% |
| !! | TGGTTAGTAGAAGCATTTGA+AGG | + | chr6.1:63661952-63661971 | None:intergenic | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr6.1:63659947-63659966 | MS.gene82105:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr6.1:63659966-63659947 | None:intergenic | 35.0% |
| AAAGTGGAAATCACACCTTG+AGG | + | chr6.1:63659137-63659156 | None:intergenic | 40.0% | |
| AACGGTAGTTAACTACCGTT+GGG | - | chr6.1:63660388-63660407 | MS.gene82105:intron | 40.0% | |
| AACGGTAGTTAACTACCGTT+GGG | + | chr6.1:63660407-63660388 | None:intergenic | 40.0% | |
| AAGAAGGGAAGAAGAAGACA+TGG | - | chr6.1:63659446-63659465 | MS.gene82105:CDS | 40.0% | |
| AAGCAAGTAGCAAACAAGCA+TGG | - | chr6.1:63660792-63660811 | MS.gene82105:intron | 40.0% | |
| AAGGCTATCATGTTACTAGC+TGG | - | chr6.1:63661604-63661623 | MS.gene82105:intron | 40.0% | |
| AAGTCAGTAGAGCCAACTAT+GGG | + | chr6.1:63661038-63661057 | None:intergenic | 40.0% | |
| AATCTCCATCCCTTCCAAAA+AGG | - | chr6.1:63661651-63661670 | MS.gene82105:intron | 40.0% | |
| AGAAGGGAAGAAGAAGACAT+GGG | - | chr6.1:63659447-63659466 | MS.gene82105:CDS | 40.0% | |
| AGGTGTAGTACCATTGGATT+TGG | + | chr6.1:63661357-63661376 | None:intergenic | 40.0% | |
| ATATATCCAGACGAAGCTAC+TGG | + | chr6.1:63658478-63658497 | None:intergenic | 40.0% | |
| ATTATGGTGAAATCGCATGC+CGG | - | chr6.1:63662080-63662099 | MS.gene82105:intron | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | chr6.1:63660184-63660203 | MS.gene82105:CDS | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | + | chr6.1:63660203-63660184 | None:intergenic | 40.0% | |
| CAGTAGTCTTTCTTACATGG+AGG | - | chr6.1:63659334-63659353 | MS.gene82105:CDS | 40.0% | |
| CAGTTGACCATATTCTATGG+TGG | - | chr6.1:63661380-63661399 | MS.gene82105:intron | 40.0% | |
| CATGCAAGTTCTTATCCCAA+GGG | - | chr6.1:63661880-63661899 | MS.gene82105:intron | 40.0% | |
| CCAGATAGGCATAATATACC+TGG | + | chr6.1:63662033-63662052 | None:intergenic | 40.0% | |
| CCAGGTATATTATGCCTATC+TGG | - | chr6.1:63662030-63662049 | MS.gene82105:intron | 40.0% | |
| CCTACAAATGTGATTCAACC+AGG | - | chr6.1:63662012-63662031 | MS.gene82105:intron | 40.0% | |
| CCTACAGAAGTAGCAACAAT+AGG | + | chr6.1:63661985-63662004 | None:intergenic | 40.0% | |
| CCTGGTTGAATCACATTTGT+AGG | + | chr6.1:63662015-63662034 | None:intergenic | 40.0% | |
| CTACTCGAACACATCCAAAT+AGG | - | chr6.1:63658971-63658990 | MS.gene82105:intron | 40.0% | |
| CTCCATGTAAGAAAGACTAC+TGG | + | chr6.1:63659282-63659301 | None:intergenic | 40.0% | |
| GAACTTGCATGAGAAGTCAT+TGG | + | chr6.1:63661871-63661890 | None:intergenic | 40.0% | |
| GAGTTTGCAATGGTCAAATG+TGG | - | chr6.1:63658681-63658700 | MS.gene82105:intron | 40.0% | |
| GCACTCAATGTTCTTCAACA+AGG | + | chr6.1:63658637-63658656 | None:intergenic | 40.0% | |
| GCTCAGTTGACCATATTCTA+TGG | - | chr6.1:63661377-63661396 | MS.gene82105:intron | 40.0% | |
| GTGTTCTAGCAAATGCCTAT+AGG | + | chr6.1:63660078-63660097 | None:intergenic | 40.0% | |
| TAAGTCAGTAGAGCCAACTA+TGG | + | chr6.1:63661039-63661058 | None:intergenic | 40.0% | |
| TAGAATATGGTCAACTGAGC+AGG | + | chr6.1:63661377-63661396 | None:intergenic | 40.0% | |
| TCATGCAAGTACTCAACCAA+GGG | - | chr6.1:63661735-63661754 | MS.gene82105:intron | 40.0% | |
| TCATGCAAGTTCTTATCCCA+AGG | - | chr6.1:63661879-63661898 | MS.gene82105:intron | 40.0% | |
| TGCTACTACTGGAATCAACA+TGG | - | chr6.1:63660935-63660954 | MS.gene82105:intron | 40.0% | |
| TTATGTTACAAGCCACCCTT+TGG | - | chr6.1:63659664-63659683 | MS.gene82105:CDS | 40.0% | |
| TTTAATGTGTCACCTAGACG+CGG | - | chr6.1:63662412-63662431 | MS.gene82105:intron | 40.0% | |
| TTTGATGCAGTTAGGAGTTC+AGG | - | chr6.1:63658352-63658371 | MS.gene82105:CDS | 40.0% | |
| ! | AACAGATAAAGGTGTAGCAG+AGG | + | chr6.1:63661000-63661019 | None:intergenic | 40.0% |
| ! | AGGTGTTTTTCACCTTGAAG+TGG | - | chr6.1:63660673-63660692 | MS.gene82105:intron | 40.0% |
| ! | CCTATTGTTGCTACTTCTGT+AGG | - | chr6.1:63661982-63662001 | MS.gene82105:intron | 40.0% |
| ! | GATGATGGTTGTGAGAAAAG+AGG | - | chr6.1:63659391-63659410 | MS.gene82105:CDS | 40.0% |
| ! | GGTCTTTTACTTGTGTTCCT+AGG | + | chr6.1:63660320-63660339 | None:intergenic | 40.0% |
| !! | GCAGTGGTCGTTTTCAAATA+AGG | - | chr6.1:63658378-63658397 | MS.gene82105:CDS | 40.0% |
| !! | TAGTTGGCTCTACTGACTTA+AGG | - | chr6.1:63661039-63661058 | MS.gene82105:intron | 40.0% |
| !! | TTTTGGAGAAGCGAAAGGAA+AGG | - | chr6.1:63662300-63662319 | MS.gene82105:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr6.1:63659946-63659965 | MS.gene82105:intron | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr6.1:63659965-63659946 | None:intergenic | 40.0% |
| AAATCACCTGAATGCAGCAC+TGG | - | chr6.1:63662671-63662690 | MS.gene82105:CDS | 45.0% | |
| AACTTGGCAAAGGTGAGAGA+TGG | + | chr6.1:63661843-63661862 | None:intergenic | 45.0% | |
| ACGGTAGTTAACTACCGTTG+GGG | - | chr6.1:63660389-63660408 | MS.gene82105:intron | 45.0% | |
| ACTTGGCAAAGGTGAGAGAT+GGG | + | chr6.1:63661842-63661861 | None:intergenic | 45.0% | |
| AGACATGGGAGGAAGAACAT+AGG | - | chr6.1:63659461-63659480 | MS.gene82105:CDS | 45.0% | |
| AGTCACACTTCTCCACTTCA+AGG | + | chr6.1:63660688-63660707 | None:intergenic | 45.0% | |
| ATCATTCTTGGGTGTGACAC+AGG | - | chr6.1:63658537-63658556 | MS.gene82105:intron | 45.0% | |
| ATGAGAGGTCATTGGAAGAG+GGG | + | chr6.1:63661719-63661738 | None:intergenic | 45.0% | |
| ATGATGAAGATTGCCTCGGT+TGG | - | chr6.1:63659420-63659439 | MS.gene82105:CDS | 45.0% | |
| ATGGAGAAGAGAGAGAACCA+TGG | - | chr6.1:63659296-63659315 | MS.gene82105:CDS | 45.0% | |
| ATGGGATAGGTCATTGTGAG+AGG | + | chr6.1:63661824-63661843 | None:intergenic | 45.0% | |
| ATGTTGTCGATCGCAGATTG+CGG | + | chr6.1:63661506-63661525 | None:intergenic | 45.0% | |
| ATTGGGAGAGAACTTGGCAA+AGG | + | chr6.1:63661853-63661872 | None:intergenic | 45.0% | |
| CAACGGTAGTTAACTACCGT+TGG | - | chr6.1:63660387-63660406 | MS.gene82105:intron | 45.0% | |
| CAACGGTAGTTAACTACCGT+TGG | + | chr6.1:63660406-63660387 | None:intergenic | 45.0% | |
| CATGAGAGGTCATTGGAAGA+GGG | + | chr6.1:63661720-63661739 | None:intergenic | 45.0% | |
| CATGCAAGTACTCAACCAAG+GGG | - | chr6.1:63661736-63661755 | MS.gene82105:intron | 45.0% | |
| CCATCAAAAGGTCCCATAGT+TGG | - | chr6.1:63661023-63661042 | MS.gene82105:intron | 45.0% | |
| CTCATGCAAGTACTCAACCA+AGG | - | chr6.1:63661734-63661753 | MS.gene82105:intron | 45.0% | |
| CTTAAAGGCAAATTGGTGGG+TGG | + | chr6.1:63662746-63662765 | None:intergenic | 45.0% | |
| GAAGTCATTGGGAGAGAACT+TGG | + | chr6.1:63661859-63661878 | None:intergenic | 45.0% | |
| GAGGATGATGAAGATTGCCT+CGG | - | chr6.1:63659416-63659435 | MS.gene82105:CDS | 45.0% | |
| GGTGAGACTTGAGTTTGCAA+TGG | - | chr6.1:63658671-63658690 | MS.gene82105:intron | 45.0% | |
| GGTTATGCGGTTGCGAAAAT+AGG | + | chr6.1:63660606-63660625 | None:intergenic | 45.0% | |
| GGTTGTGAGAAAAGAGGTTG+AGG | - | chr6.1:63659397-63659416 | MS.gene82105:CDS | 45.0% | |
| GTACTTGCATGAGAGGTCAT+TGG | + | chr6.1:63661727-63661746 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr6.1:63659679-63659698 | None:intergenic | 45.0% | |
| TAGGTCATTGTGAGAGGACT+TGG | + | chr6.1:63661818-63661837 | None:intergenic | 45.0% | |
| TGAGAGGACTTGGCAATTGA+AGG | + | chr6.1:63661808-63661827 | None:intergenic | 45.0% | |
| TGATGACATATCTCCGGAGA+AGG | - | chr6.1:63661418-63661437 | MS.gene82105:intron | 45.0% | |
| TGGATATCTTAGTCACGCCA+TGG | + | chr6.1:63659316-63659335 | None:intergenic | 45.0% | |
| TGGTTGAGTACTTGCATGAG+AGG | + | chr6.1:63661734-63661753 | None:intergenic | 45.0% | |
| TTAGGAGTTCAGGAATGCAG+TGG | - | chr6.1:63658362-63658381 | MS.gene82105:CDS | 45.0% | |
| ! | ATGCCGGTTAACGAATAGAG+AGG | - | chr6.1:63662096-63662115 | MS.gene82105:intron | 45.0% |
| ! | CCAACTATGGGACCTTTTGA+TGG | + | chr6.1:63661026-63661045 | None:intergenic | 45.0% |
| ! | TGATAGCCTTAGCCTAGTCA+TGG | + | chr6.1:63661594-63661613 | None:intergenic | 45.0% |
| ! | TGTTCAAAAGAGTGTGTCGC+TGG | - | chr6.1:63662151-63662170 | MS.gene82105:intron | 45.0% |
| ! | TTGCTACTTGAACCTCCCTT+GGG | + | chr6.1:63661898-63661917 | None:intergenic | 45.0% |
| ! | TTTTAGCAAGCCACACCTCA+AGG | - | chr6.1:63659119-63659138 | MS.gene82105:CDS | 45.0% |
| !! | TCGGTTTTTGGAGAAGCGAA+AGG | - | chr6.1:63662295-63662314 | MS.gene82105:intron | 45.0% |
| !!! | TTAACTGCCGCTGGGTTTTT+TGG | + | chr6.1:63660341-63660360 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr6.1:63659913-63659932 | MS.gene82105:intron | 5.0% |
| !! | ATATCATATTATAAAAATAT+TGG | + | chr6.1:63661261-63661280 | None:intergenic | 5.0% |
| !! | ATTATAAATATATACAAAAA+AGG | + | chr6.1:63661535-63661554 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | chr6.1:63659651-63659632 | None:intergenic | 5.0% |
| !! | TTATAAATATATACAAAAAA+GGG | + | chr6.1:63661534-63661553 | None:intergenic | 5.0% |
| !!! | CTTATATAATTTTTTAATTT+CGG | - | chr6.1:63662483-63662502 | MS.gene82105:intron | 5.0% |
| AGGGAAGAAGAAGACATGGG+AGG | - | chr6.1:63659450-63659469 | MS.gene82105:CDS | 50.0% | |
| ATGAAGATTGCCTCGGTTGG+TGG | - | chr6.1:63659423-63659442 | MS.gene82105:CDS | 50.0% | |
| ATGGATCCAGTAGCTTCGTC+TGG | - | chr6.1:63658469-63658488 | MS.gene82105:intron | 50.0% | |
| CAGTCACGTGGGCAGTTAAA+TGG | - | chr6.1:63659496-63659515 | MS.gene82105:intron | 50.0% | |
| CGGCCTCTCTATTCGTTAAC+CGG | + | chr6.1:63662102-63662121 | None:intergenic | 50.0% | |
| CGGTAGTTAACTACCGTTGG+GGG | - | chr6.1:63660390-63660409 | MS.gene82105:intron | 50.0% | |
| CTGAGCAGGTGTAGTACCAT+TGG | + | chr6.1:63661363-63661382 | None:intergenic | 50.0% | |
| GCAAAGGTGAGAGATGGGAT+AGG | + | chr6.1:63661837-63661856 | None:intergenic | 50.0% | |
| GCAAGTTCTTATCCCAAGGG+AGG | - | chr6.1:63661883-63661902 | MS.gene82105:intron | 50.0% | |
| GCATGAGAGGTCATTGGAAG+AGG | + | chr6.1:63661721-63661740 | None:intergenic | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | + | chr6.1:63659132-63659151 | None:intergenic | 50.0% | |
| GTTGGCAATGGTGAGGGATA+GGG | + | chr6.1:63661697-63661716 | None:intergenic | 50.0% | |
| TCTGATCCAGTGCTGCATTC+AGG | + | chr6.1:63662680-63662699 | None:intergenic | 50.0% | |
| TGCGACAGAAACAGTCACGT+GGG | - | chr6.1:63659485-63659504 | MS.gene82105:intron | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr6.1:63659667-63659686 | MS.gene82105:CDS | 50.0% | |
| TTGCGACAGAAACAGTCACG+TGG | - | chr6.1:63659484-63659503 | MS.gene82105:intron | 50.0% | |
| ! | AATACGGTTGGTTCCCCTCT+TGG | + | chr6.1:63659038-63659057 | None:intergenic | 50.0% |
| ! | ATTGGAAGAGGGGTTGGCAA+TGG | + | chr6.1:63661709-63661728 | None:intergenic | 50.0% |
| ! | GTTGCTACTTGAACCTCCCT+TGG | + | chr6.1:63661899-63661918 | None:intergenic | 50.0% |
| ! | TTGCTACTTGAACCTCCCCT+TGG | + | chr6.1:63661754-63661773 | None:intergenic | 50.0% |
| ATTGACGAGTCTCCGCGTCT+AGG | + | chr6.1:63662427-63662446 | None:intergenic | 55.0% | |
| GAGGTCATTGGAAGAGGGGT+TGG | + | chr6.1:63661715-63661734 | None:intergenic | 55.0% | |
| GCAAGTACTCAACCAAGGGG+AGG | - | chr6.1:63661739-63661758 | MS.gene82105:intron | 55.0% | |
| GCAATGGTGAGGGATAGGGT+TGG | + | chr6.1:63661693-63661712 | None:intergenic | 55.0% | |
| GGTTGGCAATGGTGAGGGAT+AGG | + | chr6.1:63661698-63661717 | None:intergenic | 55.0% | |
| TTCCCTTCTTCCACCAACCG+AGG | + | chr6.1:63659436-63659455 | None:intergenic | 55.0% | |
| ! | AAGAGGGGTTGGCAATGGTG+AGG | + | chr6.1:63661704-63661723 | None:intergenic | 55.0% |
| ! | AGAGGGGTTGGCAATGGTGA+GGG | + | chr6.1:63661703-63661722 | None:intergenic | 55.0% |
| ! | AGCGATGCTTTTCGCGCTTG+AGG | + | chr6.1:63662272-63662291 | None:intergenic | 55.0% |
| !! | TGCCTCGGTTGGTGGAAGAA+GGG | - | chr6.1:63659431-63659450 | MS.gene82105:CDS | 55.0% |
| !! | TTGCCTCGGTTGGTGGAAGA+AGG | - | chr6.1:63659430-63659449 | MS.gene82105:CDS | 55.0% |
| AGCGGCAGTTAACTGCCGCT+GGG | + | chr6.1:63660368-63660349 | None:intergenic | 60.0% | |
| CAGCGGCAGTTAACTGCCGC+TGG | - | chr6.1:63660348-63660367 | MS.gene82105:intron | 65.0% | |
| CAGCGGCAGTTAACTGCCGC+TGG | + | chr6.1:63660367-63660348 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 63658295 | 63662793 | 63658295 | ID=MS.gene82105 |
| chr6.1 | mRNA | 63658295 | 63662793 | 63658295 | ID=MS.gene82105.t1;Parent=MS.gene82105 |
| chr6.1 | exon | 63662790 | 63662793 | 63662790 | ID=MS.gene82105.t1.exon1;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63662790 | 63662793 | 63662790 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63662530 | 63662762 | 63662530 | ID=MS.gene82105.t1.exon2;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63662530 | 63662762 | 63662530 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63660028 | 63660314 | 63660028 | ID=MS.gene82105.t1.exon3;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63660028 | 63660314 | 63660028 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63659649 | 63659742 | 63659649 | ID=MS.gene82105.t1.exon4;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63659649 | 63659742 | 63659649 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63659055 | 63659487 | 63659055 | ID=MS.gene82105.t1.exon5;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63659055 | 63659487 | 63659055 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63658767 | 63658827 | 63658767 | ID=MS.gene82105.t1.exon6;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63658767 | 63658827 | 63658767 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| chr6.1 | exon | 63658295 | 63658451 | 63658295 | ID=MS.gene82105.t1.exon7;Parent=MS.gene82105.t1 |
| chr6.1 | CDS | 63658295 | 63658451 | 63658295 | ID=cds.MS.gene82105.t1;Parent=MS.gene82105.t1 |
| Gene Sequence |
| Protein sequence |
