Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067465.t1 | KEH39627.1 | 98.6 | 212 | 3 | 0 | 5 | 216 | 1 | 212 | 1.10E-104 | 389.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067465.t1 | Q9LMP7 | 79.1 | 211 | 43 | 1 | 6 | 216 | 14 | 223 | 2.9e-82 | 306.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067465.t1 | A0A072VCU5 | 98.6 | 212 | 3 | 0 | 5 | 216 | 1 | 212 | 7.7e-105 | 389.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05087 | MS.gene067465 | -0.837463 | 5.12E-57 | -1.69E-46 |
| MS.gene05460 | MS.gene067465 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene056059 | MS.gene067465 | 0.803602 | 3.22E-49 | -1.69E-46 |
| MS.gene059514 | MS.gene067465 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene059802 | MS.gene067465 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene061226 | MS.gene067465 | 0.803364 | 3.61E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067465 | MS.gene059227 | PPI |
| MS.gene067465 | MS.gene48916 | PPI |
| MS.gene067465 | MS.gene45857 | PPI |
| MS.gene067465 | MS.gene48256 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067465.t1 | MTR_2g104910 | 98.585 | 212 | 3 | 0 | 5 | 216 | 1 | 212 | 1.81e-154 | 426 |
| MS.gene067465.t1 | MTR_2g104910 | 99.052 | 211 | 2 | 0 | 6 | 216 | 13 | 223 | 9.82e-154 | 425 |
| MS.gene067465.t1 | MTR_4g006570 | 85.782 | 211 | 30 | 0 | 6 | 216 | 15 | 225 | 2.16e-132 | 371 |
| MS.gene067465.t1 | MTR_4g006570 | 85.782 | 211 | 30 | 0 | 6 | 216 | 31 | 241 | 4.15e-132 | 371 |
| MS.gene067465.t1 | MTR_4g006570 | 85.782 | 211 | 30 | 0 | 6 | 216 | 45 | 255 | 4.84e-132 | 372 |
| MS.gene067465.t1 | MTR_4g006570 | 85.782 | 211 | 30 | 0 | 6 | 216 | 40 | 250 | 5.70e-132 | 371 |
| MS.gene067465.t1 | MTR_4g006570 | 85.000 | 200 | 30 | 0 | 17 | 216 | 1 | 200 | 1.92e-124 | 350 |
| MS.gene067465.t1 | MTR_4g025850 | 35.841 | 226 | 124 | 6 | 6 | 216 | 21 | 240 | 9.64e-38 | 131 |
| MS.gene067465.t1 | MTR_4g025850 | 30.539 | 167 | 87 | 5 | 6 | 153 | 21 | 177 | 1.04e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067465.t1 | AT1G15880 | 79.147 | 211 | 43 | 1 | 6 | 216 | 14 | 223 | 1.27e-118 | 336 |
| MS.gene067465.t1 | AT2G45200 | 36.283 | 226 | 123 | 5 | 6 | 216 | 20 | 239 | 2.32e-37 | 130 |
| MS.gene067465.t1 | AT2G45200 | 34.016 | 244 | 122 | 6 | 6 | 216 | 20 | 257 | 1.00e-34 | 124 |
Find 39 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGGATGCACGCTCTTTA+AGG | 0.233741 | 2.4:-750208 | None:intergenic |
| GTCTTCCAGCGTTCGACTTT+TGG | 0.265092 | 2.4:+750590 | MS.gene067465:CDS |
| ACCATTATACTTGCCCTTGT+TGG | 0.314904 | 2.4:+750964 | MS.gene067465:CDS |
| TGATCGAACAAGATTAGATT+TGG | 0.341869 | 2.4:+750154 | MS.gene067465:CDS |
| TGAGATCTTGATAAATTTCT+TGG | 0.346054 | 2.4:-749163 | None:intergenic |
| CCATTATACTTGCCCTTGTT+GGG | 0.360182 | 2.4:+750965 | MS.gene067465:CDS |
| CAATAAACATCATCTTTACT+TGG | 0.366621 | 2.4:-751025 | None:intergenic |
| GTCCTCTGGTGGGTCTGAAA+TGG | 0.402834 | 2.4:+749118 | MS.gene067465:CDS |
| CCCAACAAGGGCAAGTATAA+TGG | 0.403543 | 2.4:-750965 | None:intergenic |
| CAGGCTTGGGTGTCCTCTGG+TGG | 0.415447 | 2.4:+749107 | MS.gene067465:CDS |
| ATGCAGGCTTGGGTGTCCTC+TGG | 0.438772 | 2.4:+749104 | MS.gene067465:CDS |
| AGCTCAGTTGGATGAGCAAA+TGG | 0.441426 | 2.4:+748965 | MS.gene067465:CDS |
| AATCAAGATGACGGCAGTAT+TGG | 0.444805 | 2.4:+748504 | None:intergenic |
| AACAAGATTAGATTTGGAAG+AGG | 0.457292 | 2.4:+750160 | MS.gene067465:CDS |
| TCAACGAAAGCTTCTACAAA+AGG | 0.463049 | 2.4:+749008 | MS.gene067465:CDS |
| CAGAGAGTGATCTGGAGTCT+TGG | 0.464648 | 2.4:+749039 | MS.gene067465:CDS |
| TGAGGCAACAGAGAGTGATC+TGG | 0.471531 | 2.4:+749031 | MS.gene067465:CDS |
| TAAACTCACAGATGCAGGCT+TGG | 0.471681 | 2.4:+749093 | MS.gene067465:CDS |
| AAACTCACAGATGCAGGCTT+GGG | 0.480195 | 2.4:+749094 | MS.gene067465:CDS |
| CTGTCCTGTACTGCGGCTGA+TGG | 0.485234 | 2.4:-750225 | None:intergenic |
| ACAAGTAAACTCACAGATGC+AGG | 0.514539 | 2.4:+749088 | MS.gene067465:CDS |
| AGGCTTGGGTGTCCTCTGGT+GGG | 0.515681 | 2.4:+749108 | MS.gene067465:CDS |
| GCATCCATCAGCCGCAGTAC+AGG | 0.527799 | 2.4:+750221 | MS.gene067465:CDS |
| AAGAAAACTTGAAGCTCAGT+TGG | 0.529386 | 2.4:+748953 | MS.gene067465:CDS |
| AGATTAGATTTGGAAGAGGG+TGG | 0.530846 | 2.4:+750164 | MS.gene067465:CDS |
| CATCAGCCGCAGTACAGGAC+AGG | 0.540958 | 2.4:+750226 | MS.gene067465:CDS |
| GCTTAGCTCTAAGATTAGAC+CGG | 0.556599 | 2.4:-750094 | None:intergenic |
| ACAAGATTAGATTTGGAAGA+GGG | 0.565048 | 2.4:+750161 | MS.gene067465:CDS |
| TCCCACCAAAAGTCGAACGC+TGG | 0.611928 | 2.4:-750595 | None:intergenic |
| AAATGCATACGGACCCAACA+AGG | 0.613983 | 2.4:-750978 | None:intergenic |
| CGTGAGCAGTCGCCTCCCAA+CGG | 0.616247 | 2.4:+750637 | MS.gene067465:CDS |
| TGGATGCACGCTCTTTAAGG+AGG | 0.630188 | 2.4:-750205 | None:intergenic |
| TCACAAGCACAAGCAACACT+CGG | 0.631705 | 2.4:+750560 | MS.gene067465:CDS |
| GAAAGCTTCTACAAAAGGTG+AGG | 0.666826 | 2.4:+749013 | MS.gene067465:CDS |
| AATGCATACGGACCCAACAA+GGG | 0.667761 | 2.4:-750977 | None:intergenic |
| ACAGCAATCATACCGTTGGG+AGG | 0.674625 | 2.4:-750649 | None:intergenic |
| AACCATTTCAGACCCACCAG+AGG | 0.691979 | 2.4:-749120 | None:intergenic |
| TAACAACCTGTCCTGTACTG+CGG | 0.715310 | 2.4:-750232 | None:intergenic |
| AATTTATCAAGATCTCACCC+AGG | 0.754080 | 2.4:+749169 | MS.gene067465:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAATGATAAATGAAA+AGG | - | chr2.4:749365-749384 | None:intergenic | 10.0% |
| !! | GTTATAATAAATAATGTTAT+AGG | - | chr2.4:749862-749881 | None:intergenic | 10.0% |
| !! | GTTTAAATAAATATTGAATA+AGG | + | chr2.4:750676-750695 | MS.gene067465:intron | 10.0% |
| !! | TATAATAAATAATGTTATAG+GGG | - | chr2.4:749860-749879 | None:intergenic | 10.0% |
| !!! | AAGCTTATATATAATTTTAT+AGG | - | chr2.4:750356-750375 | None:intergenic | 10.0% |
| !!! | CAAAAATATTTGAAATATAA+AGG | - | chr2.4:750007-750026 | None:intergenic | 10.0% |
| !! | GTAACAGTTATAATAAATAA+TGG | - | chr2.4:749904-749923 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTCTTTCTTGAA+GGG | + | chr2.4:748827-748846 | MS.gene067465:intron | 15.0% |
| !!! | TTTTTTTTTTTCTTTCTTGA+AGG | + | chr2.4:748826-748845 | MS.gene067465:intron | 15.0% |
| !! | ACATTGGAATTGAAATAAAA+GGG | - | chr2.4:749798-749817 | None:intergenic | 20.0% |
| !! | AGGTCAAGTATAAATTTATT+AGG | - | chr2.4:749402-749421 | None:intergenic | 20.0% |
| !! | GAAAATAAGAAAAATGCATA+CGG | - | chr2.4:750992-751011 | None:intergenic | 20.0% |
| !! | TTTAAATACATCTAACAAGT+TGG | - | chr2.4:750054-750073 | None:intergenic | 20.0% |
| !!! | AATGGTTTTATATCGTAAAT+TGG | + | chr2.4:748983-749002 | MS.gene067465:CDS | 20.0% |
| !!! | ATCAAGTAATTTTGTTGAAT+TGG | + | chr2.4:748802-748821 | MS.gene067465:intron | 20.0% |
| !!! | TCAAGTAATTTTGTTGAATT+GGG | + | chr2.4:748803-748822 | MS.gene067465:intron | 20.0% |
| !!! | TCTTTTTATCTGTATTATGA+CGG | - | chr2.4:748615-748634 | None:intergenic | 20.0% |
| !!! | TGCAATTTGTGTTTTAAAAA+AGG | - | chr2.4:749530-749549 | None:intergenic | 20.0% |
| !!! | TTTTTCTTATTTTCATCTAC+TGG | + | chr2.4:750998-751017 | MS.gene067465:CDS | 20.0% |
| ! | AAAAGACGACTTAAAGTTTA+TGG | + | chr2.4:748629-748648 | MS.gene067465:intron | 25.0% |
| ! | AAACTTCAAATGAACATTCA+AGG | - | chr2.4:750453-750472 | None:intergenic | 25.0% |
| ! | CAAATGTCTGATATTAAAGA+TGG | - | chr2.4:750408-750427 | None:intergenic | 25.0% |
| ! | CATATTATATCATGTAGTTG+TGG | + | chr2.4:749240-749259 | MS.gene067465:intron | 25.0% |
| ! | GAAAAAATAATCCATTAGCT+TGG | - | chr2.4:750431-750450 | None:intergenic | 25.0% |
| ! | GACATTGGAATTGAAATAAA+AGG | - | chr2.4:749799-749818 | None:intergenic | 25.0% |
| ! | TAAAACTTGTGTAGTAGAAA+TGG | - | chr2.4:750853-750872 | None:intergenic | 25.0% |
| ! | TGAGATCTTGATAAATTTCT+TGG | - | chr2.4:749166-749185 | None:intergenic | 25.0% |
| ! | TTTCAATTCCAATGTCTTAT+AGG | + | chr2.4:749803-749822 | MS.gene067465:intron | 25.0% |
| !! | AGGTTTAGTTTAAATAAGAG+TGG | - | chr2.4:749672-749691 | None:intergenic | 25.0% |
| !! | GGTTTAGTTTAAATAAGAGT+GGG | - | chr2.4:749671-749690 | None:intergenic | 25.0% |
| !! | GTTAGATGTATTTAAAATGC+AGG | + | chr2.4:750058-750077 | MS.gene067465:intron | 25.0% |
| !! | GTTTAGTTTAAATAAGAGTG+GGG | - | chr2.4:749670-749689 | None:intergenic | 25.0% |
| !! | TTTAGTTTAAATAAGAGTGG+GGG | - | chr2.4:749669-749688 | None:intergenic | 25.0% |
| !!! | ACACAAGTTTTATTTCTCTA+TGG | + | chr2.4:750861-750880 | MS.gene067465:intron | 25.0% |
| !!! | GCATAGTTCAAGTTAATTTT+AGG | + | chr2.4:748852-748871 | MS.gene067465:intron | 25.0% |
| !!! | TTAAAATGCAGGAGTTTTAT+CGG | + | chr2.4:750069-750088 | MS.gene067465:intron | 25.0% |
| AACAAGATTAGATTTGGAAG+AGG | + | chr2.4:750160-750179 | MS.gene067465:CDS | 30.0% | |
| AATAAAGCGAAAAAAGTCGA+TGG | + | chr2.4:750939-750958 | MS.gene067465:CDS | 30.0% | |
| AATGACATCCTATAAGACAT+TGG | - | chr2.4:749814-749833 | None:intergenic | 30.0% | |
| AATTGCCAGTTAGAACAATT+AGG | - | chr2.4:749716-749735 | None:intergenic | 30.0% | |
| ACAAGATTAGATTTGGAAGA+GGG | + | chr2.4:750161-750180 | MS.gene067465:CDS | 30.0% | |
| ACAGAAAAACCAAGTTATAC+AGG | - | chr2.4:748735-748754 | None:intergenic | 30.0% | |
| ATAAAGAACCCTTTACATCA+GGG | - | chr2.4:749307-749326 | None:intergenic | 30.0% | |
| ATATGCTCACACATAATGAT+TGG | - | chr2.4:749225-749244 | None:intergenic | 30.0% | |
| CTATGGTGTTTGTTTAATGA+CGG | + | chr2.4:750878-750897 | MS.gene067465:intron | 30.0% | |
| TAGCAAAAACCTGTATAACT+TGG | + | chr2.4:748723-748742 | MS.gene067465:intron | 30.0% | |
| TATGCTCACACATAATGATT+GGG | - | chr2.4:749224-749243 | None:intergenic | 30.0% | |
| TCAACTTCAGAATCAAAACA+GGG | - | chr2.4:749565-749584 | None:intergenic | 30.0% | |
| TCTGATATTAAAGATGGCAT+TGG | - | chr2.4:750402-750421 | None:intergenic | 30.0% | |
| TGATCGAACAAGATTAGATT+TGG | + | chr2.4:750154-750173 | MS.gene067465:CDS | 30.0% | |
| TGGAATATTAGTTATTCTCC+TGG | - | chr2.4:750833-750852 | None:intergenic | 30.0% | |
| TTGGAATTGAAATAAAAGGG+TGG | - | chr2.4:749795-749814 | None:intergenic | 30.0% | |
| ! | ACTTTTTAATCTTCTCCATC+AGG | + | chr2.4:749926-749945 | MS.gene067465:intron | 30.0% |
| ! | TTGTCTTTTTAACCTTTTGC+AGG | + | chr2.4:748929-748948 | MS.gene067465:intron | 30.0% |
| ! | TTTTATCAAGATTGTTCCAC+TGG | + | chr2.4:750289-750308 | MS.gene067465:intron | 30.0% |
| !!! | CTGAAGTTTTTTTTTTGTCC+AGG | + | chr2.4:750812-750831 | MS.gene067465:intron | 30.0% |
| !!! | GAGAATTCTTTTGAAACTGA+AGG | - | chr2.4:749422-749441 | None:intergenic | 30.0% |
| AAGAAAACTTGAAGCTCAGT+TGG | + | chr2.4:748953-748972 | MS.gene067465:CDS | 35.0% | |
| AATCATCTTGATCAGACTTC+TGG | + | chr2.4:748550-748569 | MS.gene067465:intron | 35.0% | |
| AATTTATCAAGATCTCACCC+AGG | + | chr2.4:749169-749188 | MS.gene067465:CDS | 35.0% | |
| AGTCACCTAATTGTTCTAAC+TGG | + | chr2.4:749708-749727 | MS.gene067465:intron | 35.0% | |
| ATGCTCACACATAATGATTG+GGG | - | chr2.4:749223-749242 | None:intergenic | 35.0% | |
| CATAAAGAACCCTTTACATC+AGG | - | chr2.4:749308-749327 | None:intergenic | 35.0% | |
| GTCAACTTCAGAATCAAAAC+AGG | - | chr2.4:749566-749585 | None:intergenic | 35.0% | |
| GTTCTTTATGATAGCTGAGA+AGG | + | chr2.4:749318-749337 | MS.gene067465:intron | 35.0% | |
| GTTTATTCTTGTACTGCAGA+TGG | + | chr2.4:750526-750545 | MS.gene067465:intron | 35.0% | |
| TCAACGAAAGCTTCTACAAA+AGG | + | chr2.4:749008-749027 | MS.gene067465:CDS | 35.0% | |
| ! | TATTAAAGATGGCATTGGAG+CGG | - | chr2.4:750397-750416 | None:intergenic | 35.0% |
| !! | AGTTCTGAAAAACAGAGAAG+TGG | - | chr2.4:749618-749637 | None:intergenic | 35.0% |
| !! | ATCTGTATTATGACGGACTA+CGG | - | chr2.4:748608-748627 | None:intergenic | 35.0% |
| AAATAAGAGTGGGGGTAGAA+GGG | - | chr2.4:749661-749680 | None:intergenic | 40.0% | |
| AACTGTACTCCCTGATGTAA+AGG | + | chr2.4:749295-749314 | MS.gene067465:intron | 40.0% | |
| ACAAGTAAACTCACAGATGC+AGG | + | chr2.4:749088-749107 | MS.gene067465:CDS | 40.0% | |
| ACATCACAAAGCAACAGAGT+AGG | - | chr2.4:749952-749971 | None:intergenic | 40.0% | |
| ACCATTATACTTGCCCTTGT+TGG | + | chr2.4:750964-750983 | MS.gene067465:CDS | 40.0% | |
| ACTAAACCTTCTAACCTCTC+TGG | + | chr2.4:749683-749702 | MS.gene067465:intron | 40.0% | |
| ACTGTACTCCCTGATGTAAA+GGG | + | chr2.4:749296-749315 | MS.gene067465:intron | 40.0% | |
| ACTTCAGAATCAAAACAGGG+TGG | - | chr2.4:749562-749581 | None:intergenic | 40.0% | |
| AGATTAGATTTGGAAGAGGG+TGG | + | chr2.4:750164-750183 | MS.gene067465:CDS | 40.0% | |
| AGCTCATACGATGTAATACC+TGG | - | chr2.4:749190-749209 | None:intergenic | 40.0% | |
| CCATTATACTTGCCCTTGTT+GGG | + | chr2.4:750965-750984 | MS.gene067465:CDS | 40.0% | |
| GAAAGCTTCTACAAAAGGTG+AGG | + | chr2.4:749013-749032 | MS.gene067465:CDS | 40.0% | |
| GCTCATACGATGTAATACCT+GGG | - | chr2.4:749189-749208 | None:intergenic | 40.0% | |
| TAAATAAGAGTGGGGGTAGA+AGG | - | chr2.4:749662-749681 | None:intergenic | 40.0% | |
| TCAACAGCAATCATACCGTT+GGG | - | chr2.4:750655-750674 | None:intergenic | 40.0% | |
| TCAGACATTTGCCAAGCTAA+TGG | + | chr2.4:750417-750436 | MS.gene067465:intron | 40.0% | |
| TGTCTGACAGATCTAAGCTT+AGG | - | chr2.4:750031-750050 | None:intergenic | 40.0% | |
| TTCAACAGCAATCATACCGT+TGG | - | chr2.4:750656-750675 | None:intergenic | 40.0% | |
| ! | ACGGCTTTTAACAATGTTGC+AGG | + | chr2.4:750897-750916 | MS.gene067465:intron | 40.0% |
| ! | AGGGAGTACAGTTTGCAAAT+AGG | - | chr2.4:749288-749307 | None:intergenic | 40.0% |
| ! | ATGAGAGAGGAGTATAACAG+AGG | + | chr2.4:749452-749471 | MS.gene067465:intron | 40.0% |
| ! | CAAGTTTTCTTGCCTGCAAA+AGG | - | chr2.4:748944-748963 | None:intergenic | 40.0% |
| ! | CTCTTTTCTACAGATGAGAG+AGG | + | chr2.4:749439-749458 | MS.gene067465:intron | 40.0% |
| ! | TGAGAGAGGAGTATAACAGA+GGG | + | chr2.4:749453-749472 | MS.gene067465:intron | 40.0% |
| !! | CTCTGTTGCTTTGTGATGTT+AGG | + | chr2.4:749953-749972 | MS.gene067465:intron | 40.0% |
| !! | GCTTAGCTCTAAGATTAGAC+CGG | - | chr2.4:750097-750116 | None:intergenic | 40.0% |
| !! | GGAGTCTTTCTGAAGCTAAA+AGG | - | chr2.4:749509-749528 | None:intergenic | 40.0% |
| AAACTCACAGATGCAGGCTT+GGG | + | chr2.4:749094-749113 | MS.gene067465:CDS | 45.0% | |
| AAATGCATACGGACCCAACA+AGG | - | chr2.4:750981-751000 | None:intergenic | 45.0% | |
| AATGCATACGGACCCAACAA+GGG | - | chr2.4:750980-750999 | None:intergenic | 45.0% | |
| AGAAGTGGATCAACTGCAAC+GGG | - | chr2.4:749603-749622 | None:intergenic | 45.0% | |
| AGCTCAGTTGGATGAGCAAA+TGG | + | chr2.4:748965-748984 | MS.gene067465:CDS | 45.0% | |
| CCCAACAAGGGCAAGTATAA+TGG | - | chr2.4:750968-750987 | None:intergenic | 45.0% | |
| GAGAAGTGGATCAACTGCAA+CGG | - | chr2.4:749604-749623 | None:intergenic | 45.0% | |
| TAAACTCACAGATGCAGGCT+TGG | + | chr2.4:749093-749112 | MS.gene067465:CDS | 45.0% | |
| TAACAACCTGTCCTGTACTG+CGG | - | chr2.4:750235-750254 | None:intergenic | 45.0% | |
| TAATAAGTGACGCACTCCAG+TGG | - | chr2.4:750308-750327 | None:intergenic | 45.0% | |
| TCAAAACAGGGTGGACGAAT+AGG | - | chr2.4:749553-749572 | None:intergenic | 45.0% | |
| TCACAAGCACAAGCAACACT+CGG | + | chr2.4:750560-750579 | MS.gene067465:CDS | 45.0% | |
| ! | AATTAGGTGACTAGCCAGAG+AGG | - | chr2.4:749700-749719 | None:intergenic | 45.0% |
| ! | GAGAGAGGAGTATAACAGAG+GGG | + | chr2.4:749454-749473 | MS.gene067465:intron | 45.0% |
| ! | TGATGGATGCACGCTCTTTA+AGG | - | chr2.4:750211-750230 | None:intergenic | 45.0% |
| !! | TTATAATAAATAATGTTATA+GGG | - | chr2.4:749861-749880 | None:intergenic | 5.0% |
| !! | TTATTATTTACTTATATATT+TGG | + | chr2.4:750322-750341 | MS.gene067465:intron | 5.0% |
| !!! | AATATATTTTTTTGTTTTTT+AGG | + | chr2.4:748885-748904 | MS.gene067465:intron | 5.0% |
| AAACAGAACAACCCCAGCTG+TGG | - | chr2.4:750495-750514 | None:intergenic | 50.0% | |
| AACCATTTCAGACCCACCAG+AGG | - | chr2.4:749123-749142 | None:intergenic | 50.0% | |
| AAGCAACAGAGTAGGCCTGA+TGG | - | chr2.4:749944-749963 | None:intergenic | 50.0% | |
| ACAGATGTCTGATCCACAGC+TGG | + | chr2.4:750479-750498 | MS.gene067465:intron | 50.0% | |
| ACAGCAATCATACCGTTGGG+AGG | - | chr2.4:750652-750671 | None:intergenic | 50.0% | |
| AGATGTCTGATCCACAGCTG+GGG | + | chr2.4:750481-750500 | MS.gene067465:intron | 50.0% | |
| CAGATGTCTGATCCACAGCT+GGG | + | chr2.4:750480-750499 | MS.gene067465:intron | 50.0% | |
| TGAGGCAACAGAGAGTGATC+TGG | + | chr2.4:749031-749050 | MS.gene067465:CDS | 50.0% | |
| ! | CAGAGAGTGATCTGGAGTCT+TGG | + | chr2.4:749039-749058 | MS.gene067465:CDS | 50.0% |
| ! | GACTAGCCAGAGAGGTTAGA+AGG | - | chr2.4:749692-749711 | None:intergenic | 50.0% |
| ! | GTCTTCCAGCGTTCGACTTT+TGG | + | chr2.4:750590-750609 | MS.gene067465:CDS | 50.0% |
| ! | TCCAGCGTTCGACTTTTGGT+GGG | + | chr2.4:750594-750613 | MS.gene067465:CDS | 50.0% |
| ! | TGGATGCACGCTCTTTAAGG+AGG | - | chr2.4:750208-750227 | None:intergenic | 50.0% |
| ! | TTCCAGCGTTCGACTTTTGG+TGG | + | chr2.4:750593-750612 | MS.gene067465:CDS | 50.0% |
| !!! | TGCAGGAGTTTTATCGGCTC+CGG | + | chr2.4:750075-750094 | MS.gene067465:intron | 50.0% |
| CAACTGCAACGGGAGATCGA+CGG | - | chr2.4:749593-749612 | None:intergenic | 55.0% | |
| TCCCACCAAAAGTCGAACGC+TGG | - | chr2.4:750598-750617 | None:intergenic | 55.0% | |
| ! | GTCCTCTGGTGGGTCTGAAA+TGG | + | chr2.4:749118-749137 | MS.gene067465:CDS | 55.0% |
| AGGCTTGGGTGTCCTCTGGT+GGG | + | chr2.4:749108-749127 | MS.gene067465:CDS | 60.0% | |
| ATGCAGGCTTGGGTGTCCTC+TGG | + | chr2.4:749104-749123 | MS.gene067465:CDS | 60.0% | |
| CATCAGCCGCAGTACAGGAC+AGG | + | chr2.4:750226-750245 | MS.gene067465:CDS | 60.0% | |
| CTGTCCTGTACTGCGGCTGA+TGG | - | chr2.4:750228-750247 | None:intergenic | 60.0% | |
| GCATCCATCAGCCGCAGTAC+AGG | + | chr2.4:750221-750240 | MS.gene067465:CDS | 60.0% | |
| CAGGCTTGGGTGTCCTCTGG+TGG | + | chr2.4:749107-749126 | MS.gene067465:CDS | 65.0% | |
| CGTGAGCAGTCGCCTCCCAA+CGG | + | chr2.4:750637-750656 | MS.gene067465:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 748511 | 751032 | 748511 | ID=MS.gene067465 |
| chr2.4 | mRNA | 748511 | 751032 | 748511 | ID=MS.gene067465.t1;Parent=MS.gene067465 |
| chr2.4 | exon | 748511 | 748525 | 748511 | ID=MS.gene067465.t1.exon1;Parent=MS.gene067465.t1 |
| chr2.4 | CDS | 748511 | 748525 | 748511 | ID=cds.MS.gene067465.t1;Parent=MS.gene067465.t1 |
| chr2.4 | exon | 748951 | 749190 | 748951 | ID=MS.gene067465.t1.exon2;Parent=MS.gene067465.t1 |
| chr2.4 | CDS | 748951 | 749190 | 748951 | ID=cds.MS.gene067465.t1;Parent=MS.gene067465.t1 |
| chr2.4 | exon | 750080 | 750247 | 750080 | ID=MS.gene067465.t1.exon3;Parent=MS.gene067465.t1 |
| chr2.4 | CDS | 750080 | 750247 | 750080 | ID=cds.MS.gene067465.t1;Parent=MS.gene067465.t1 |
| chr2.4 | exon | 750545 | 750658 | 750545 | ID=MS.gene067465.t1.exon4;Parent=MS.gene067465.t1 |
| chr2.4 | CDS | 750545 | 750658 | 750545 | ID=cds.MS.gene067465.t1;Parent=MS.gene067465.t1 |
| chr2.4 | exon | 750919 | 751032 | 750919 | ID=MS.gene067465.t1.exon5;Parent=MS.gene067465.t1 |
| chr2.4 | CDS | 750919 | 751032 | 750919 | ID=cds.MS.gene067465.t1;Parent=MS.gene067465.t1 |
| Gene Sequence |
| Protein sequence |